Sun Mar 9 12:03:27 UTC 2025 I: starting to build openstructure/trixie/amd64 on jenkins on '2025-03-09 12:03' Sun Mar 9 12:03:27 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_31/35171/console.log Sun Mar 9 12:03:27 UTC 2025 I: Downloading source for trixie/openstructure=2.9.2-2 --2025-03-09 12:03:27-- http://deb.debian.org/debian/pool/main/o/openstructure/openstructure_2.9.2-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 4847 (4.7K) [text/prs.lines.tag] Saving to: ‘openstructure_2.9.2-2.dsc’ 0K .... 100% 713M=0s 2025-03-09 12:03:27 (713 MB/s) - ‘openstructure_2.9.2-2.dsc’ saved [4847/4847] Sun Mar 9 12:03:27 UTC 2025 I: openstructure_2.9.2-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: openstructure Binary: libost-base2.9, libost-bindings2.9, libost-conop2.9, libost-db2.9, libost-geom2.9, libost-gfx2.9, libost-gui2.9, libost-img-alg2.9, libost-img2.9, libost-info2.9, libost-io2.9, libost-mol-alg2.9, libost-mol-mm2.9, libost-mol2.9, libost-seq-alg2.9, libost-seq2.9, openstructure, python3-ost, libost-base-dev, libost-bindings-dev, libost-conop-dev, libost-db-dev, libost-geom-dev, libost-gfx-dev, libost-gui-dev, libost-img-alg-dev, libost-img-dev, libost-info-dev, libost-io-dev, libost-mol-alg-dev, libost-mol-mm-dev, libost-mol-dev, libost-seq-alg-dev, libost-seq-dev Architecture: any Version: 2.9.2-2 Maintainer: Debichem Team Uploaders: Andrius Merkys , Homepage: https://www.openstructure.org Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/openstructure Vcs-Git: https://salsa.debian.org/debichem-team/openstructure.git Testsuite: autopkgtest Testsuite-Triggers: clustalw, dssp, ncbi-blast+, voronota Build-Depends: clustalw [amd64 arm64 mips64el ppc64el riscv64 s390x] , cmake, debhelper-compat (= 13), dh-python, dssp , libboost-all-dev, libeigen3-dev, libfftw3-dev, libglu1-mesa-dev, libopenmm-dev [amd64 arm64 armhf ppc64el riscv64 alpha ia64 loong64 m68k sh4], libopenmm-plugins [amd64 arm64 armhf ppc64el riscv64 alpha ia64 loong64 m68k sh4], libparasail-dev [amd64], libpng-dev, libqt5opengl5-dev, libsqlite3-dev, libtiff-dev, python3-dev, python3-matplotlib , python3-numpy , python3-pil , python3-pyqt5, python3-scipy , qtbase5-dev, voronota Package-List: libost-base-dev deb libdevel optional arch=any libost-base2.9 deb libs optional arch=any libost-bindings-dev deb libdevel optional arch=any libost-bindings2.9 deb libs optional arch=any libost-conop-dev deb libdevel optional arch=any libost-conop2.9 deb libs optional arch=any libost-db-dev deb libdevel optional arch=any libost-db2.9 deb libs optional arch=any libost-geom-dev deb libdevel optional arch=any libost-geom2.9 deb libs optional arch=any libost-gfx-dev deb libdevel optional arch=any libost-gfx2.9 deb libs optional arch=any libost-gui-dev deb libdevel optional arch=any libost-gui2.9 deb libs optional arch=any libost-img-alg-dev deb libdevel optional arch=any libost-img-alg2.9 deb libs optional arch=any libost-img-dev deb libdevel optional arch=any libost-img2.9 deb libs optional arch=any libost-info-dev deb libdevel optional arch=any libost-info2.9 deb libs optional arch=any libost-io-dev deb libdevel optional arch=any libost-io2.9 deb libs optional arch=any libost-mol-alg-dev deb libdevel optional arch=any libost-mol-alg2.9 deb libs optional arch=any libost-mol-dev deb libdevel optional arch=any libost-mol-mm-dev deb libdevel optional arch=amd64,arm64,armhf,ppc64el,riscv64,alpha,ia64,loong64,m68k,sh4 libost-mol-mm2.9 deb libs optional arch=amd64,arm64,armhf,ppc64el,riscv64,alpha,ia64,loong64,m68k,sh4 libost-mol2.9 deb libs optional arch=any libost-seq-alg-dev deb libdevel optional arch=any libost-seq-alg2.9 deb libs optional arch=any libost-seq-dev deb libdevel optional arch=any libost-seq2.9 deb libs optional arch=any openstructure deb science optional arch=any python3-ost deb python optional arch=any Checksums-Sha1: 517f853137c7d9706f78daae33c7b54b541d9fd0 27763216 openstructure_2.9.2.orig.tar.xz 2932fdb725ef01c0557ab26b6b2c19a6f60e76be 92351036 openstructure_2.9.2-2.debian.tar.xz Checksums-Sha256: e1f93ab3f36bf24b8414058d5ec42e8777c42b0408f3a00b121d6003f4719b50 27763216 openstructure_2.9.2.orig.tar.xz 7e36fa22f9fc108a8e894907f22a8727f5b647a42a13898f19d36c58f6735baa 92351036 openstructure_2.9.2-2.debian.tar.xz Files: 5e706f496c6464b7af9b337fa6168888 27763216 openstructure_2.9.2.orig.tar.xz 1c0fff0e2ad74c31349a8f4389a5cf96 92351036 openstructure_2.9.2-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmfK6fcSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHdLgP/AoouWa8HU34QHp07J5NGtZNBoPTjVZJ xfRuW6dnQburwFHc0uKeZYIJcBdKrk7AtUbnBcpUgraE2qFZlzvKhY4RUErJZvIT fCDe52NmsnTIU0uaXXllo8mE1s1oSb0KRa7W7WO4hnGv18jFb8gvUULx59HD8dYI sNKy4+uJENuWEQA9yd0Gd8GPbFeYpmmJZELGJNw1B9hoT377CWw0TiALM74V6Tfq X1P8PzzVKXrOhTBgkJ/8Y5260FWqIabeeTdKl4T9Ycmrpxwf+yhWvJv8mqDgIeRg SyohGfDZ5x9UiBEanphT11goQZDqr6svB/6S0kXVBO+AUJKmyJcW6cocgLo6TeaX rDJYn6Cxh/+/UBb0erzBBAL3s5vkDoYFjb3As3WEGwTa8q1vzJM3jGEKYqaqw7vL SAlYTMMhsZzqyhp/eEtEY/NuhfJi2w9DGue5Ry48/wk2vPlTzBfOwihtDvoQ9W/l FjzUFDungefXUBFZbUwjWTcaigY0V+n5OHsfoRGrhX4ybUhitQXFjZdX75RRLeyv ZEi6TdXFE7wnYodnIqDE/7TGe/iDDoUq9m7/pRs9RpuwlJPHU8+VJ746Dg3SBnA8 EVmDwJi3em6e5DjkrnX4yTrf+vCO1v8be37deL6glhJk8tlbGyVKHxvliiZRyClY UIXM4P6l5cmf =Yb4y -----END PGP SIGNATURE----- Sun Mar 9 12:03:27 UTC 2025 I: Checking whether the package is not for us Sun Mar 9 12:03:28 UTC 2025 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sun Mar 9 12:03:28 UTC 2025 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sun Mar 9 12:48:53 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 9 00:03:32 -12 2025 I: pbuilder-time-stamp: 1741521812 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [openstructure_2.9.2-2.dsc] I: copying [./openstructure_2.9.2.orig.tar.xz] I: copying [./openstructure_2.9.2-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./openstructure_2.9.2-2.dsc: unsupported subcommand dpkg-source: info: extracting openstructure in openstructure-2.9.2 dpkg-source: info: unpacking openstructure_2.9.2.orig.tar.xz dpkg-source: info: unpacking openstructure_2.9.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python-dist-packages.patch dpkg-source: info: applying fix-quotes-in-ENV.patch dpkg-source: info: applying skip-network-tests.patch dpkg-source: info: applying add-python3-shebangs.patch dpkg-source: info: applying ost_config.patch dpkg-source: info: applying skip-dssp-tests.patch dpkg-source: info: applying increase-tolerance-test_io_sequence_profile.patch dpkg-source: info: applying skip-test_io_img.patch dpkg-source: info: applying skip-testMultipleClustalW.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2835719/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e0b89d5950134276ade6d627a5cd49cc' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2835719' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/pbuilderrc_llkP --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/b1 --logfile b1/build.log openstructure_2.9.2-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2835719/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: clustalw, cmake, debhelper-compat (= 13), dh-python, dssp, libboost-all-dev, libeigen3-dev, libfftw3-dev, libglu1-mesa-dev, libopenmm-dev, libopenmm-plugins, libparasail-dev, libpng-dev, libqt5opengl5-dev, libsqlite3-dev, libtiff-dev, python3-dev, python3-matplotlib, python3-numpy, python3-pil, python3-pyqt5, python3-scipy, qtbase5-dev, voronota dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19800 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on clustalw; however: Package clustalw is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dssp; however: Package dssp is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libglu1-mesa-dev; however: Package libglu1-mesa-dev is not installed. pbuilder-satisfydepends-dummy depends on libopenmm-dev; however: Package libopenmm-dev is not installed. pbuilder-satisfydepends-dummy depends on libopenmm-plugins; however: Package libopenmm-plugins is not installed. pbuilder-satisfydepends-dummy depends on libparasail-dev; however: Package libparasail-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev; however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev; however: Package libtiff-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pil; however: Package python3-pil is not installed. pbuilder-satisfydepends-dummy depends on python3-pyqt5; however: Package python3-pyqt5 is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev; however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on voronota; however: Package voronota is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} clustalw{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dssp{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libbrotli1{a} libcbor0.10{a} libcifpp-data{a} libcifpp7{a} libcom-err2{a} libcups2t64{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgcrypt20{a} libgfortran-14-dev{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap2{a} liblerc-dev{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmtdev1t64{a} libmunge2{a} libnghttp2-14{a} libnghttp3-9{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopenmm-dev{a} libopenmm-plugins{a} libopenmm8.1{a} libopenmpi-dev{a} libopenmpi40{a} libp11-kit0{a} libparasail-dev{a} libparasail8{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm6{a} libsqlite3-dev{a} libssh2-1t64{a} libtasn1-6{a} libtcl8.6{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxft2{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxnvctrl0{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-attr{a} python3-autocommand{a} python3-brotli{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-fonttools{a} python3-fs{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pyparsing{a} python3-pyqt5{a} python3-pyqt5.sip{a} python3-pytz{a} python3-scipy{a} python3-setuptools{a} python3-sympy{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-unicodedata2{a} python3-zipp{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} voronota{a} x11-common{a} x11proto-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus isympy-common javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libglib2.0-data libgpg-error-l10n libldap-common libmail-sendmail-perl libpng-tools libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 libsasl2-modules linux-sysctl-defaults lynx mesa-vulkan-drivers psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-olefile python3-pooch qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xauth xdg-user-dirs 0 packages upgraded, 463 newly installed, 0 to remove and 0 not upgraded. Need to get 352 MB of archives. After unpacking 1717 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.2-1 [27.1 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 12.0.0 [28.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2025a-2 [259 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.2-1 [10.0 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.2-1 [28.1 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-2+b1 [138 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.1-2 [160 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:2.2.3+ds-2+b1 [5081 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-7 [878 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 39 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 openssh-client amd64 1:9.9p2-1 [970 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.47-1 [282 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+24 [217 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 68 http://deb.debian.org/debian trixie/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 cmake-data all 3.31.6-1 [2268 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 81 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get: 83 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.12.1-3 [369 kB] Get: 87 http://deb.debian.org/debian trixie/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 88 http://deb.debian.org/debian trixie/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 89 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 cmake amd64 3.31.6-1 [12.0 MB] Get: 91 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-3 [539 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 95 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 97 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 109 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 112 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.8.0-1 [724 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20250108 [113 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 libcifpp-data all 7.0.9-1 [484 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 libcifpp7 amd64 7.0.9-1 [1032 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 dssp amd64 4.4.10-1 [697 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 fontconfig amd64 2.15.0-2 [463 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.3-1 [190 kB] Get: 120 http://deb.debian.org/debian trixie/main amd64 libgfortran-14-dev amd64 14.2.0-17 [879 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17 [11.7 MB] Get: 122 http://deb.debian.org/debian trixie/main amd64 gfortran-14 amd64 14.2.0-17 [14.0 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 125 http://deb.debian.org/debian trixie/main amd64 libibverbs1 amd64 55.0-1 [62.2 kB] Get: 126 http://deb.debian.org/debian trixie/main amd64 ibverbs-providers amd64 55.0-1 [351 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 icu-devtools amd64 72.1-6 [210 kB] Get: 128 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 129 http://deb.debian.org/debian trixie/main amd64 libllvm17t64 amd64 1:17.0.6-21 [23.6 MB] Get: 130 http://deb.debian.org/debian trixie/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 131 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.124-1 [8180 B] Get: 132 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.124-1 [38.9 kB] Get: 133 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.124-1 [22.4 kB] Get: 134 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 135 http://deb.debian.org/debian trixie/main amd64 libhsakmt1 amd64 6.2.4+ds-1 [61.1 kB] Get: 136 http://deb.debian.org/debian trixie/main amd64 libhsa-runtime64-1 amd64 6.1.2-3 [535 kB] Get: 137 http://deb.debian.org/debian trixie/main amd64 libamdhip64-5 amd64 5.7.1-5+b1 [8882 kB] Get: 138 http://deb.debian.org/debian trixie/main amd64 libavahi-common-data amd64 0.8-16 [112 kB] Get: 139 http://deb.debian.org/debian trixie/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB] Get: 140 http://deb.debian.org/debian trixie/main amd64 libdbus-1-3 amd64 1.16.2-1 [177 kB] Get: 141 http://deb.debian.org/debian trixie/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB] Get: 142 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-4.1 [10.6 MB] Get: 143 http://deb.debian.org/debian trixie/main amd64 libboost-atomic1.83.0 amd64 1.83.0-4.1 [234 kB] Get: 144 http://deb.debian.org/debian trixie/main amd64 libboost-atomic1.83-dev amd64 1.83.0-4.1 [235 kB] Get: 145 http://deb.debian.org/debian trixie/main amd64 libboost-atomic-dev amd64 1.83.0.2+b2 [3904 B] Get: 146 http://deb.debian.org/debian trixie/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-4.1 [240 kB] Get: 147 http://deb.debian.org/debian trixie/main amd64 libboost-chrono1.83-dev amd64 1.83.0-4.1 [246 kB] Get: 148 http://deb.debian.org/debian trixie/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 149 http://deb.debian.org/debian trixie/main amd64 libboost-container1.83.0 amd64 1.83.0-4.1 [259 kB] Get: 150 http://deb.debian.org/debian trixie/main amd64 libboost-container1.83-dev amd64 1.83.0-4.1 [264 kB] Get: 151 http://deb.debian.org/debian trixie/main amd64 libboost-container-dev amd64 1.83.0.2+b2 [4072 B] Get: 152 http://deb.debian.org/debian trixie/main amd64 libboost-date-time1.83.0 amd64 1.83.0-4.1 [230 kB] Get: 153 http://deb.debian.org/debian trixie/main amd64 libboost-serialization1.83.0 amd64 1.83.0-4.1 [333 kB] Get: 154 http://deb.debian.org/debian trixie/main amd64 libboost-serialization1.83-dev amd64 1.83.0-4.1 [373 kB] Get: 155 http://deb.debian.org/debian trixie/main amd64 libboost-date-time1.83-dev amd64 1.83.0-4.1 [239 kB] Get: 156 http://deb.debian.org/debian trixie/main amd64 libboost-system1.83.0 amd64 1.83.0-4.1 [230 kB] Get: 157 http://deb.debian.org/debian trixie/main amd64 libboost-system1.83-dev amd64 1.83.0-4.1 [232 kB] Get: 158 http://deb.debian.org/debian trixie/main amd64 libboost-thread1.83.0 amd64 1.83.0-4.1 [269 kB] Get: 159 http://deb.debian.org/debian trixie/main amd64 libboost-thread1.83-dev amd64 1.83.0-4.1 [276 kB] Get: 160 http://deb.debian.org/debian trixie/main amd64 libboost-context1.83.0 amd64 1.83.0-4.1 [231 kB] Get: 161 http://deb.debian.org/debian trixie/main amd64 libboost-context1.83-dev amd64 1.83.0-4.1 [233 kB] Get: 162 http://deb.debian.org/debian trixie/main amd64 libboost-context-dev amd64 1.83.0.2+b2 [3804 B] Get: 163 http://deb.debian.org/debian trixie/main amd64 libboost-coroutine1.83.0 amd64 1.83.0-4.1 [234 kB] Get: 164 http://deb.debian.org/debian trixie/main amd64 libboost-coroutine1.83-dev amd64 1.83.0-4.1 [236 kB] Get: 165 http://deb.debian.org/debian trixie/main amd64 libboost-coroutine-dev amd64 1.83.0.2+b2 [3868 B] Get: 166 http://deb.debian.org/debian trixie/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B] Get: 167 http://deb.debian.org/debian trixie/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 168 http://deb.debian.org/debian trixie/main amd64 libboost-exception1.83-dev amd64 1.83.0-4.1 [230 kB] Get: 169 http://deb.debian.org/debian trixie/main amd64 libboost-exception-dev amd64 1.83.0.2+b2 [3584 B] Get: 170 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-4.1 [282 kB] Get: 171 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-4.1 [298 kB] Get: 172 http://deb.debian.org/debian trixie/main amd64 libboost-fiber1.83.0 amd64 1.83.0-4.1 [254 kB] Get: 173 http://deb.debian.org/debian trixie/main amd64 libboost-fiber1.83-dev amd64 1.83.0-4.1 [265 kB] Get: 174 http://deb.debian.org/debian trixie/main amd64 libboost-fiber-dev amd64 1.83.0.2+b2 [4028 B] Get: 175 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 176 http://deb.debian.org/debian trixie/main amd64 libboost-graph1.83.0 amd64 1.83.0-4.1 [359 kB] Get: 177 http://deb.debian.org/debian trixie/main amd64 libboost-regex1.83.0 amd64 1.83.0-4.1 [330 kB] Get: 178 http://deb.debian.org/debian trixie/main amd64 libicu-dev amd64 72.1-6 [10.4 MB] Get: 179 http://deb.debian.org/debian trixie/main amd64 libboost-regex1.83-dev amd64 1.83.0-4.1 [346 kB] Get: 180 http://deb.debian.org/debian trixie/main amd64 libboost-test1.83.0 amd64 1.83.0-4.1 [471 kB] Get: 181 http://deb.debian.org/debian trixie/main amd64 libboost-test1.83-dev amd64 1.83.0-4.1 [540 kB] Get: 182 http://deb.debian.org/debian trixie/main amd64 libboost-graph1.83-dev amd64 1.83.0-4.1 [383 kB] Get: 183 http://deb.debian.org/debian trixie/main amd64 libboost-graph-dev amd64 1.83.0.2+b2 [3700 B] Get: 184 http://deb.debian.org/debian trixie/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 185 http://deb.debian.org/debian trixie/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 186 http://deb.debian.org/debian trixie/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 187 http://deb.debian.org/debian trixie/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 188 http://deb.debian.org/debian trixie/main amd64 librdmacm1t64 amd64 55.0-1 [70.2 kB] Get: 189 http://deb.debian.org/debian trixie/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 190 http://deb.debian.org/debian trixie/main amd64 libhwloc15 amd64 2.12.0-1 [164 kB] Get: 191 http://deb.debian.org/debian trixie/main amd64 libmunge2 amd64 0.5.16-1 [19.7 kB] Get: 192 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Get: 193 http://deb.debian.org/debian trixie/main amd64 libxnvctrl0 amd64 535.171.04-1+b2 [14.2 kB] Get: 194 http://deb.debian.org/debian trixie/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 195 http://deb.debian.org/debian trixie/main amd64 libhwloc-plugins amd64 2.12.0-1 [18.1 kB] Get: 196 http://deb.debian.org/debian trixie/main amd64 libpmix2t64 amd64 5.0.6-3 [651 kB] Get: 197 http://deb.debian.org/debian trixie/main amd64 libibumad3 amd64 55.0-1 [28.5 kB] Get: 198 http://deb.debian.org/debian trixie/main amd64 libibmad5 amd64 55.0-1 [43.3 kB] Get: 199 http://deb.debian.org/debian trixie/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 200 http://deb.debian.org/debian trixie/main amd64 libopenmpi40 amd64 5.0.7-1 [2365 kB] Get: 201 http://deb.debian.org/debian trixie/main amd64 libboost-mpi1.83.0 amd64 1.83.0-4.1 [271 kB] Get: 202 http://deb.debian.org/debian trixie/main amd64 libboost-graph-parallel1.83.0 amd64 1.83.0-4.1 [280 kB] Get: 203 http://deb.debian.org/debian trixie/main amd64 libboost-graph-parallel1.83-dev amd64 1.83.0-4.1 [284 kB] Get: 204 http://deb.debian.org/debian trixie/main amd64 libboost-graph-parallel-dev amd64 1.83.0.2+b2 [3728 B] Get: 205 http://deb.debian.org/debian trixie/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-4.1 [261 kB] Get: 206 http://deb.debian.org/debian trixie/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 207 http://deb.debian.org/debian trixie/main amd64 libboost-json1.83.0 amd64 1.83.0-4.1 [357 kB] Get: 208 http://deb.debian.org/debian trixie/main amd64 libboost-json1.83-dev amd64 1.83.0-4.1 [373 kB] Get: 209 http://deb.debian.org/debian trixie/main amd64 libboost-json-dev amd64 1.83.0.2+b2 [3704 B] Get: 210 http://deb.debian.org/debian trixie/main amd64 libboost-locale1.83.0 amd64 1.83.0-4.1 [472 kB] Get: 211 http://deb.debian.org/debian trixie/main amd64 libboost-locale1.83-dev amd64 1.83.0-4.1 [554 kB] Get: 212 http://deb.debian.org/debian trixie/main amd64 libboost-locale-dev amd64 1.83.0.2+b2 [3924 B] Get: 213 http://deb.debian.org/debian trixie/main amd64 libboost-log1.83.0 amd64 1.83.0-4.1 [708 kB] Get: 214 http://deb.debian.org/debian trixie/main amd64 libboost-log1.83-dev amd64 1.83.0-4.1 [877 kB] Get: 215 http://deb.debian.org/debian trixie/main amd64 libboost-log-dev amd64 1.83.0.2+b2 [3796 B] Get: 216 http://deb.debian.org/debian trixie/main amd64 libboost-math1.83.0 amd64 1.83.0-4.1 [523 kB] Get: 217 http://deb.debian.org/debian trixie/main amd64 libboost-math1.83-dev amd64 1.83.0-4.1 [571 kB] Get: 218 http://deb.debian.org/debian trixie/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 219 http://deb.debian.org/debian trixie/main amd64 openmpi-common all 5.0.7-1 [97.2 kB] Get: 220 http://deb.debian.org/debian trixie/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 221 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 222 http://deb.debian.org/debian trixie/main amd64 libibverbs-dev amd64 55.0-1 [648 kB] Get: 223 http://deb.debian.org/debian trixie/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 224 http://deb.debian.org/debian trixie/main amd64 libltdl7 amd64 2.5.4-3 [415 kB] Get: 225 http://deb.debian.org/debian trixie/main amd64 libltdl-dev amd64 2.5.4-3 [167 kB] Get: 226 http://deb.debian.org/debian trixie/main amd64 libhwloc-dev amd64 2.12.0-1 [255 kB] Get: 227 http://deb.debian.org/debian trixie/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 228 http://deb.debian.org/debian trixie/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 229 http://deb.debian.org/debian trixie/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 230 http://deb.debian.org/debian trixie/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 231 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 232 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 233 http://deb.debian.org/debian trixie/main amd64 libpmix-dev amd64 5.0.6-3 [3961 kB] Get: 234 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 235 http://deb.debian.org/debian trixie/main amd64 openmpi-bin amd64 5.0.7-1 [189 kB] Get: 236 http://deb.debian.org/debian trixie/main amd64 libopenmpi-dev amd64 5.0.7-1 [1089 kB] Get: 237 http://deb.debian.org/debian trixie/main amd64 mpi-default-dev amd64 1.18 [3372 B] Get: 238 http://deb.debian.org/debian trixie/main amd64 libboost-mpi1.83-dev amd64 1.83.0-4.1 [290 kB] Get: 239 http://deb.debian.org/debian trixie/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 240 http://deb.debian.org/debian trixie/main amd64 libboost-python1.83.0 amd64 1.83.0-4.1 [320 kB] Get: 241 http://deb.debian.org/debian trixie/main amd64 mpi-default-bin amd64 1.18 [2576 B] Get: 242 http://deb.debian.org/debian trixie/main amd64 libboost-mpi-python1.83.0 amd64 1.83.0-4.1 [358 kB] Get: 243 http://deb.debian.org/debian trixie/main amd64 libboost-mpi-python1.83-dev amd64 1.83.0-4.1 [237 kB] Get: 244 http://deb.debian.org/debian trixie/main amd64 libboost-mpi-python-dev amd64 1.83.0.2+b2 [3712 B] Get: 245 http://deb.debian.org/debian trixie/main amd64 libboost-nowide1.83.0 amd64 1.83.0-4.1 [234 kB] Get: 246 http://deb.debian.org/debian trixie/main amd64 libboost-nowide1.83-dev amd64 1.83.0-4.1 [236 kB] Get: 247 http://deb.debian.org/debian trixie/main amd64 libboost-nowide-dev amd64 1.83.0.2+b2 [3668 B] Get: 248 http://deb.debian.org/debian trixie/main amd64 libboost-numpy1.83.0 amd64 1.83.0-4.1 [242 kB] Get: 249 http://deb.debian.org/debian trixie/main amd64 libboost-numpy1.83-dev amd64 1.83.0-4.1 [246 kB] Get: 250 http://deb.debian.org/debian trixie/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B] Get: 251 http://deb.debian.org/debian trixie/main amd64 libboost-program-options1.83.0 amd64 1.83.0-4.1 [347 kB] Get: 252 http://deb.debian.org/debian trixie/main amd64 libboost-program-options1.83-dev amd64 1.83.0-4.1 [375 kB] Get: 253 http://deb.debian.org/debian trixie/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 254 http://deb.debian.org/debian trixie/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB] Get: 255 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 256 http://deb.debian.org/debian trixie/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB] Get: 257 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.13.2-1 [10.3 kB] Get: 258 http://deb.debian.org/debian trixie/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB] Get: 259 http://deb.debian.org/debian trixie/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 260 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 261 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.13.2-1 [26.1 kB] Get: 262 http://deb.debian.org/debian trixie/main amd64 libboost-python1.83-dev amd64 1.83.0-4.1 [328 kB] Get: 263 http://deb.debian.org/debian trixie/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B] Get: 264 http://deb.debian.org/debian trixie/main amd64 libboost-random1.83.0 amd64 1.83.0-4.1 [238 kB] Get: 265 http://deb.debian.org/debian trixie/main amd64 libboost-random1.83-dev amd64 1.83.0-4.1 [241 kB] Get: 266 http://deb.debian.org/debian trixie/main amd64 libboost-random-dev amd64 1.83.0.2+b2 [3592 B] Get: 267 http://deb.debian.org/debian trixie/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B] Get: 268 http://deb.debian.org/debian trixie/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 269 http://deb.debian.org/debian trixie/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-4.1 [283 kB] Get: 270 http://deb.debian.org/debian trixie/main amd64 libboost-stacktrace1.83-dev amd64 1.83.0-4.1 [245 kB] Get: 271 http://deb.debian.org/debian trixie/main amd64 libboost-stacktrace-dev amd64 1.83.0.2+b2 [3592 B] Get: 272 http://deb.debian.org/debian trixie/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B] Get: 273 http://deb.debian.org/debian trixie/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B] Get: 274 http://deb.debian.org/debian trixie/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 275 http://deb.debian.org/debian trixie/main amd64 libboost-timer1.83.0 amd64 1.83.0-4.1 [235 kB] Get: 276 http://deb.debian.org/debian trixie/main amd64 libboost-timer1.83-dev amd64 1.83.0-4.1 [236 kB] Get: 277 http://deb.debian.org/debian trixie/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 278 http://deb.debian.org/debian trixie/main amd64 libboost1.83-tools-dev amd64 1.83.0-4.1 [1529 kB] Get: 279 http://deb.debian.org/debian trixie/main amd64 libboost-tools-dev amd64 1.83.0.2+b2 [3768 B] Get: 280 http://deb.debian.org/debian trixie/main amd64 libboost-type-erasure1.83.0 amd64 1.83.0-4.1 [245 kB] Get: 281 http://deb.debian.org/debian trixie/main amd64 libboost-type-erasure1.83-dev amd64 1.83.0-4.1 [249 kB] Get: 282 http://deb.debian.org/debian trixie/main amd64 libboost-type-erasure-dev amd64 1.83.0.2+b2 [3688 B] Get: 283 http://deb.debian.org/debian trixie/main amd64 libboost-url1.83.0 amd64 1.83.0-4.1 [336 kB] Get: 284 http://deb.debian.org/debian trixie/main amd64 libboost-url1.83-dev amd64 1.83.0-4.1 [421 kB] Get: 285 http://deb.debian.org/debian trixie/main amd64 libboost-url-dev amd64 1.83.0.2+b2 [3732 B] Get: 286 http://deb.debian.org/debian trixie/main amd64 libboost-wave1.83.0 amd64 1.83.0-4.1 [437 kB] Get: 287 http://deb.debian.org/debian trixie/main amd64 libboost-wave1.83-dev amd64 1.83.0-4.1 [485 kB] Get: 288 http://deb.debian.org/debian trixie/main amd64 libboost-wave-dev amd64 1.83.0.2+b2 [3624 B] Get: 289 http://deb.debian.org/debian trixie/main amd64 libboost-all-dev amd64 1.83.0.2+b2 [3936 B] Get: 290 http://deb.debian.org/debian trixie/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB] Get: 291 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB] Get: 292 http://deb.debian.org/debian trixie/main amd64 libdeflate-dev amd64 1.23-1+b1 [56.0 kB] Get: 293 http://deb.debian.org/debian trixie/main amd64 libdouble-conversion3 amd64 3.3.1-1 [41.8 kB] Get: 294 http://deb.debian.org/debian trixie/main amd64 libdrm-intel1 amd64 2.4.124-1 [63.8 kB] Get: 295 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.124-1 [22.4 kB] Get: 296 http://deb.debian.org/debian trixie/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get: 297 http://deb.debian.org/debian trixie/main amd64 libwayland-server0 amd64 1.23.1-3 [34.4 kB] Get: 298 http://deb.debian.org/debian trixie/main amd64 libglapi-mesa amd64 24.3.4-3 [38.5 kB] Get: 299 http://deb.debian.org/debian trixie/main amd64 libllvm19 amd64 1:19.1.7-1+b1 [26.0 MB] Get: 300 http://deb.debian.org/debian trixie/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 301 http://deb.debian.org/debian trixie/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get: 302 http://deb.debian.org/debian trixie/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get: 303 http://deb.debian.org/debian trixie/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get: 304 http://deb.debian.org/debian trixie/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get: 305 http://deb.debian.org/debian trixie/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get: 306 http://deb.debian.org/debian trixie/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get: 307 http://deb.debian.org/debian trixie/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get: 308 http://deb.debian.org/debian trixie/main amd64 libxshmfence1 amd64 1.3-1+b3 [8852 B] Get: 309 http://deb.debian.org/debian trixie/main amd64 mesa-libgallium amd64 24.3.4-3 [9492 kB] Get: 310 http://deb.debian.org/debian trixie/main amd64 libgbm1 amd64 24.3.4-3 [43.7 kB] Get: 311 http://deb.debian.org/debian trixie/main amd64 libwayland-client0 amd64 1.23.1-3 [26.8 kB] Get: 312 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 313 http://deb.debian.org/debian trixie/main amd64 libegl-mesa0 amd64 24.3.4-3 [127 kB] Get: 314 http://deb.debian.org/debian trixie/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Get: 315 http://deb.debian.org/debian trixie/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get: 316 http://deb.debian.org/debian trixie/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB] Get: 317 http://deb.debian.org/debian trixie/main amd64 libvulkan1 amd64 1.4.304.0-1 [129 kB] Get: 318 http://deb.debian.org/debian trixie/main amd64 libgl1-mesa-dri amd64 24.3.4-3 [45.2 kB] Get: 319 http://deb.debian.org/debian trixie/main amd64 libglx-mesa0 amd64 24.3.4-3 [143 kB] Get: 320 http://deb.debian.org/debian trixie/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get: 321 http://deb.debian.org/debian trixie/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get: 322 http://deb.debian.org/debian trixie/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 323 http://deb.debian.org/debian trixie/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 324 http://deb.debian.org/debian trixie/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 325 http://deb.debian.org/debian trixie/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB] Get: 326 http://deb.debian.org/debian trixie/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 327 http://deb.debian.org/debian trixie/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 328 http://deb.debian.org/debian trixie/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 329 http://deb.debian.org/debian trixie/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB] Get: 330 http://deb.debian.org/debian trixie/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB] Get: 331 http://deb.debian.org/debian trixie/main amd64 libegl-dev amd64 1.7.0-1+b2 [19.5 kB] Get: 332 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 333 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 334 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 335 http://deb.debian.org/debian trixie/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 336 http://deb.debian.org/debian trixie/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 337 http://deb.debian.org/debian trixie/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB] Get: 338 http://deb.debian.org/debian trixie/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB] Get: 339 http://deb.debian.org/debian trixie/main amd64 libfftw3-long3 amd64 3.3.10-2+b1 [347 kB] Get: 340 http://deb.debian.org/debian trixie/main amd64 libfftw3-quad3 amd64 3.3.10-2+b1 [618 kB] Get: 341 http://deb.debian.org/debian trixie/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Get: 342 http://deb.debian.org/debian trixie/main amd64 libfftw3-bin amd64 3.3.10-2+b1 [51.3 kB] Get: 343 http://deb.debian.org/debian trixie/main amd64 libfftw3-dev amd64 3.3.10-2+b1 [2118 kB] Get: 344 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 345 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get: 346 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get: 347 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.83.4-1 [1512 kB] Get: 348 http://deb.debian.org/debian trixie/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Get: 349 http://deb.debian.org/debian trixie/main amd64 libglu1-mesa amd64 9.0.2-1.1+b3 [184 kB] Get: 350 http://deb.debian.org/debian trixie/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B] Get: 351 http://deb.debian.org/debian trixie/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b3 [223 kB] Get: 352 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 353 http://deb.debian.org/debian trixie/main amd64 libgudev-1.0-0 amd64 238-6 [14.5 kB] Get: 354 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB] Get: 355 http://deb.debian.org/debian trixie/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 356 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 357 http://deb.debian.org/debian trixie/main amd64 libwacom-common all 2.14.0-1 [103 kB] Get: 358 http://deb.debian.org/debian trixie/main amd64 libwacom9 amd64 2.14.0-1 [25.3 kB] Get: 359 http://deb.debian.org/debian trixie/main amd64 libinput-bin amd64 1.27.1-1 [26.0 kB] Get: 360 http://deb.debian.org/debian trixie/main amd64 libmtdev1t64 amd64 1.1.7-1 [22.6 kB] Get: 361 http://deb.debian.org/debian trixie/main amd64 libinput10 amd64 1.27.1-1 [135 kB] Get: 362 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 363 http://deb.debian.org/debian trixie/main amd64 libjbig-dev amd64 2.1-6.1+b2 [31.4 kB] Get: 364 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB] Get: 365 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3.1 [292 kB] Get: 366 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3.1 [72.0 kB] Get: 367 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 368 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 369 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 370 http://deb.debian.org/debian trixie/main amd64 liblerc-dev amd64 4.0.0+ds-5 [183 kB] Get: 371 http://deb.debian.org/debian trixie/main amd64 liblzma-dev amd64 5.6.4-1 [323 kB] Get: 372 http://deb.debian.org/debian trixie/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB] Get: 373 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.3-1 [204 kB] Get: 374 http://deb.debian.org/debian trixie/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-4+b1 [1058 kB] Get: 375 http://deb.debian.org/debian trixie/main amd64 libopenmm-dev amd64 8.1.2+dfsg-4+b1 [346 kB] Get: 376 http://deb.debian.org/debian trixie/main amd64 libopenmm-plugins amd64 8.1.2+dfsg-4+b1 [1458 kB] Get: 377 http://deb.debian.org/debian trixie/main amd64 libparasail8 amd64 2.6.2+dfsg-2 [1890 kB] Get: 378 http://deb.debian.org/debian trixie/main amd64 libparasail-dev amd64 2.6.2+dfsg-2 [1504 kB] Get: 379 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB] Get: 380 http://deb.debian.org/debian trixie/main amd64 libpng-dev amd64 1.6.47-1 [366 kB] Get: 381 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 382 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5+b2 [760 kB] Get: 383 http://deb.debian.org/debian trixie/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-4 [1868 kB] Get: 384 http://deb.debian.org/debian trixie/main amd64 libqt5concurrent5t64 amd64 5.15.15+dfsg-4 [44.8 kB] Get: 385 http://deb.debian.org/debian trixie/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-4 [217 kB] Get: 386 http://deb.debian.org/debian trixie/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-4 [682 kB] Get: 387 http://deb.debian.org/debian trixie/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 388 http://deb.debian.org/debian trixie/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB] Get: 389 http://deb.debian.org/debian trixie/main amd64 libxcb-util1 amd64 0.4.1-1 [23.5 kB] Get: 390 http://deb.debian.org/debian trixie/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB] Get: 391 http://deb.debian.org/debian trixie/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [16.7 kB] Get: 392 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 393 http://deb.debian.org/debian trixie/main amd64 libxcb-render-util0 amd64 0.3.10-1 [18.4 kB] Get: 394 http://deb.debian.org/debian trixie/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Get: 395 http://deb.debian.org/debian trixie/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB] Get: 396 http://deb.debian.org/debian trixie/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB] Get: 397 http://deb.debian.org/debian trixie/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB] Get: 398 http://deb.debian.org/debian trixie/main amd64 xkb-data all 2.42-1 [790 kB] Get: 399 http://deb.debian.org/debian trixie/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB] Get: 400 http://deb.debian.org/debian trixie/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [16.2 kB] Get: 401 http://deb.debian.org/debian trixie/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-4 [3497 kB] Get: 402 http://deb.debian.org/debian trixie/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-4 [2398 kB] Get: 403 http://deb.debian.org/debian trixie/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-4 [126 kB] Get: 404 http://deb.debian.org/debian trixie/main amd64 libqt5designer5 amd64 5.15.15-6 [2758 kB] Get: 405 http://deb.debian.org/debian trixie/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-4 [125 kB] Get: 406 http://deb.debian.org/debian trixie/main amd64 libqt5help5 amd64 5.15.15-6 [151 kB] Get: 407 http://deb.debian.org/debian trixie/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-4 [151 kB] Get: 408 http://deb.debian.org/debian trixie/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-4 [206 kB] Get: 409 http://deb.debian.org/debian trixie/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-4 [151 kB] Get: 410 http://deb.debian.org/debian trixie/main amd64 libvulkan-dev amd64 1.4.304.0-1 [1452 kB] Get: 411 http://deb.debian.org/debian trixie/main amd64 libxext-dev amd64 2:1.3.4-1+b3 [104 kB] Get: 412 http://deb.debian.org/debian trixie/main amd64 qt5-qmake-bin amd64 5.15.15+dfsg-4 [1066 kB] Get: 413 http://deb.debian.org/debian trixie/main amd64 qtchooser amd64 66-2 [26.3 kB] Get: 414 http://deb.debian.org/debian trixie/main amd64 qt5-qmake amd64 5.15.15+dfsg-4 [224 kB] Get: 415 http://deb.debian.org/debian trixie/main amd64 qtbase5-dev-tools amd64 5.15.15+dfsg-4 [778 kB] Get: 416 http://deb.debian.org/debian trixie/main amd64 qtbase5-dev amd64 5.15.15+dfsg-4 [1123 kB] Get: 417 http://deb.debian.org/debian trixie/main amd64 libqt5opengl5-dev amd64 5.15.15+dfsg-4 [51.7 kB] Get: 418 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB] Get: 419 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 420 http://deb.debian.org/debian trixie/main amd64 libsharpyuv-dev amd64 1.5.0-0.1 [120 kB] Get: 421 http://deb.debian.org/debian trixie/main amd64 libsqlite3-dev amd64 3.46.1-1 [1107 kB] Get: 422 http://deb.debian.org/debian trixie/main amd64 libzstd-dev amd64 1.5.6+dfsg-2 [365 kB] Get: 423 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 424 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 425 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 426 http://deb.debian.org/debian trixie/main amd64 libwebpdecoder3 amd64 1.5.0-0.1 [208 kB] Get: 427 http://deb.debian.org/debian trixie/main amd64 libwebp-dev amd64 1.5.0-0.1 [450 kB] Get: 428 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 429 http://deb.debian.org/debian trixie/main amd64 libtiffxx6 amd64 4.5.1+git230720-5 [149 kB] Get: 430 http://deb.debian.org/debian trixie/main amd64 libtiff-dev amd64 4.5.1+git230720-5 [463 kB] Get: 431 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 432 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-7 [2735 kB] Get: 433 http://deb.debian.org/debian trixie/main amd64 python3-attr all 25.1.0-1 [68.7 kB] Get: 434 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB] Get: 435 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB] Get: 436 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 437 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 438 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 439 http://deb.debian.org/debian trixie/main amd64 python3-pytz all 2025.1-3 [150 kB] Get: 440 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2025.1-3 [4004 B] Get: 441 http://deb.debian.org/debian trixie/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 442 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-6 [95.1 kB] Get: 443 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB] Get: 444 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.4.0+dfsg-1+b1 [25.5 kB] Get: 445 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.14.1-4+b1 [17.1 MB] Get: 446 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 447 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.3-5 [4148 kB] Get: 448 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get: 449 http://deb.debian.org/debian trixie/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b4 [299 kB] Get: 450 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 451 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.55.3-2+b1 [1448 kB] Get: 452 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB] Get: 453 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB] Get: 454 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.9-1 [113 kB] Get: 455 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB] Get: 456 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.13.1-1+b1 [9760 B] Get: 457 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB] Get: 458 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 459 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 460 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-7+b1 [23.0 MB] Get: 461 http://deb.debian.org/debian trixie/main amd64 python3-pyqt5.sip amd64 12.17.0-1+b1 [61.6 kB] Get: 462 http://deb.debian.org/debian trixie/main amd64 python3-pyqt5 amd64 5.15.11+dfsg-2 [2508 kB] Get: 463 http://deb.debian.org/debian trixie/main amd64 voronota amd64 1.29.4307+ds-1 [2650 kB] Fetched 352 MB in 15s (22.9 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19800 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.2-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.2-1_amd64.deb ... Unpacking python3.13-minimal (3.13.2-1) ... Setting up libpython3.13-minimal:amd64 (3.13.2-1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.13-minimal (3.13.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20134 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.2-1_amd64.deb ... Unpacking python3-minimal (3.13.2-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_12.0.0_all.deb ... Unpacking media-types (12.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025a-2_all.deb ... Unpacking tzdata (2025a-2) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../4-libffi8_3.4.7-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../6-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-1_amd64.deb ... Unpacking python3.13 (3.13.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../9-libpython3-stdlib_3.13.2-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.2-1) ... Setting up python3-minimal (3.13.2-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21144 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.2-1_amd64.deb ... Unpacking python3 (3.13.2-1) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-2+b1_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.2.3+ds-2+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../002-libblas3_3.12.1-2_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-2) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../003-libgfortran5_14.2.0-17_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-17) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../004-liblapack3_3.12.1-2_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../005-python3-numpy_1%3a2.2.3+ds-2+b1_amd64.deb ... Unpacking python3-numpy (1:2.2.3+ds-2+b1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../006-libproc2-0_2%3a4.0.4-7_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../007-procps_2%3a4.0.4-7_amd64.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../008-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../013-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../015-bsdextrautils_2.40.4-5_amd64.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../016-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../017-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../018-libedit2_3.1-20250104-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20250104-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../019-libcbor0.10_0.10.2-2_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-2) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../020-libfido2-1_1.15.0-1+b1_amd64.deb ... Unpacking libfido2-1:amd64 (1.15.0-1+b1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../021-libkrb5support0_1.21.3-4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-4) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../022-libcom-err2_1.47.2-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../023-libk5crypto3_1.21.3-4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-4) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../024-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../025-libkrb5-3_1.21.3-4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-4) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../026-libgssapi-krb5-2_1.21.3-4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-4) ... Selecting previously unselected package openssh-client. Preparing to unpack .../027-openssh-client_1%3a9.9p2-1_amd64.deb ... Unpacking openssh-client (1:9.9p2-1) ... Selecting previously unselected package m4. Preparing to unpack .../028-m4_1.4.19-7_amd64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../029-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../030-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../031-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../032-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../033-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../034-libbrotli1_1.1.0-2+b7_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../035-libpng16-16t64_1.6.47-1_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.47-1) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../036-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../037-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../038-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../039-fontconfig-config_2.15.0-2_amd64.deb ... Unpacking fontconfig-config (2.15.0-2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../040-libfontconfig1_2.15.0-2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../041-libxau6_1%3a1.0.11-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../042-libxdmcp6_1%3a1.1.5-1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../043-libxcb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../044-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../045-libx11-6_2%3a1.8.10-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.10-2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../046-libxrender1_1%3a0.9.10-1.1+b4_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b4) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../047-libxft2_2.3.6-1+b4_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b4) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../048-libxext6_2%3a1.3.4-1+b3_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b3) ... Selecting previously unselected package x11-common. Preparing to unpack .../049-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../050-libxss1_1%3a1.2.3-1+b3_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b3) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../051-libtk8.6_8.6.16-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.16-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../052-tk8.6-blt2.5_2.5.3+dfsg-7_amd64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... Selecting previously unselected package blt. Preparing to unpack .../053-blt_2.5.3+dfsg-7_amd64.deb ... Unpacking blt (2.5.3+dfsg-7) ... Selecting previously unselected package clustalw. Preparing to unpack .../054-clustalw_2.1+lgpl-7_amd64.deb ... Unpacking clustalw (2.1+lgpl-7) ... Selecting previously unselected package cmake-data. Preparing to unpack .../055-cmake-data_3.31.6-1_all.deb ... Unpacking cmake-data (3.31.6-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../056-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../057-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Selecting previously unselected package libarchive13t64:amd64. Preparing to unpack .../058-libarchive13t64_3.7.4-1.1_amd64.deb ... Unpacking libarchive13t64:amd64 (3.7.4-1.1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../059-libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libidn2-0:amd64. Preparing to unpack .../060-libidn2-0_2.3.7-2+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.7-2+b1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../061-libsasl2-modules-db_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../062-libsasl2-2_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../063-libldap2_2.6.9+dfsg-1_amd64.deb ... Unpacking libldap2:amd64 (2.6.9+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../064-libnghttp2-14_1.64.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../065-libnghttp3-9_1.8.0-1_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.8.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../066-libpsl5t64_0.21.2-1.1+b1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ... Selecting previously unselected package libp11-kit0:amd64. Preparing to unpack .../067-libp11-kit0_0.25.5-3_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-3) ... Selecting previously unselected package libtasn1-6:amd64. Preparing to unpack .../068-libtasn1-6_4.20.0-2_amd64.deb ... Unpacking libtasn1-6:amd64 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:amd64. Preparing to unpack .../069-libgnutls30t64_3.8.9-2_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.9-2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../070-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../071-libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../072-libcurl4t64_8.12.1-3_amd64.deb ... Unpacking libcurl4t64:amd64 (8.12.1-3) ... Selecting previously unselected package libjsoncpp26:amd64. Preparing to unpack .../073-libjsoncpp26_1.9.6-3_amd64.deb ... Unpacking libjsoncpp26:amd64 (1.9.6-3) ... Selecting previously unselected package librhash1:amd64. Preparing to unpack .../074-librhash1_1.4.5-1_amd64.deb ... Unpacking librhash1:amd64 (1.4.5-1) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../075-libuv1t64_1.50.0-2_amd64.deb ... Unpacking libuv1t64:amd64 (1.50.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../076-cmake_3.31.6-1_amd64.deb ... Unpacking cmake (3.31.6-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../077-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../078-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../079-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../080-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../081-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../082-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../083-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../084-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../085-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../086-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../087-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../088-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../089-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../090-python3-more-itertools_10.6.0-1_all.deb ... Unpacking python3-more-itertools (10.6.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../091-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../092-python3-typeguard_4.4.2-1_all.deb ... Unpacking python3-typeguard (4.4.2-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../093-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../094-python3-jaraco.context_6.0.1-1_all.deb ... Unpacking python3-jaraco.context (6.0.1-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../095-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../096-python3-pkg-resources_75.8.0-1_all.deb ... Unpacking python3-pkg-resources (75.8.0-1) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../097-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../098-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../099-python3-setuptools_75.8.0-1_all.deb ... Unpacking python3-setuptools (75.8.0-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../100-dh-python_6.20250108_all.deb ... Unpacking dh-python (6.20250108) ... Selecting previously unselected package libcifpp-data. Preparing to unpack .../101-libcifpp-data_7.0.9-1_all.deb ... Unpacking libcifpp-data (7.0.9-1) ... Selecting previously unselected package libcifpp7:amd64. Preparing to unpack .../102-libcifpp7_7.0.9-1_amd64.deb ... Unpacking libcifpp7:amd64 (7.0.9-1) ... Selecting previously unselected package dssp. Preparing to unpack .../103-dssp_4.4.10-1_amd64.deb ... Unpacking dssp (4.4.10-1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../104-fontconfig_2.15.0-2_amd64.deb ... Unpacking fontconfig (2.15.0-2) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../105-fonts-lyx_2.4.3-1_all.deb ... Unpacking fonts-lyx (2.4.3-1) ... Selecting previously unselected package libgfortran-14-dev:amd64. Preparing to unpack .../106-libgfortran-14-dev_14.2.0-17_amd64.deb ... Unpacking libgfortran-14-dev:amd64 (14.2.0-17) ... Selecting previously unselected package gfortran-14-x86-64-linux-gnu. Preparing to unpack .../107-gfortran-14-x86-64-linux-gnu_14.2.0-17_amd64.deb ... Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17) ... Selecting previously unselected package gfortran-14. Preparing to unpack .../108-gfortran-14_14.2.0-17_amd64.deb ... Unpacking gfortran-14 (14.2.0-17) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../109-libnl-3-200_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-3-200:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../110-libnl-route-3-200_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../111-libibverbs1_55.0-1_amd64.deb ... Unpacking libibverbs1:amd64 (55.0-1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../112-ibverbs-providers_55.0-1_amd64.deb ... Unpacking ibverbs-providers:amd64 (55.0-1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../113-icu-devtools_72.1-6_amd64.deb ... Unpacking icu-devtools (72.1-6) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../114-libz3-4_4.13.3-1_amd64.deb ... Unpacking libz3-4:amd64 (4.13.3-1) ... Selecting previously unselected package libllvm17t64:amd64. Preparing to unpack .../115-libllvm17t64_1%3a17.0.6-21_amd64.deb ... Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... Selecting previously unselected package libamd-comgr2:amd64. Preparing to unpack .../116-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b2_amd64.deb ... Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../117-libdrm-common_2.4.124-1_all.deb ... Unpacking libdrm-common (2.4.124-1) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../118-libdrm2_2.4.124-1_amd64.deb ... Unpacking libdrm2:amd64 (2.4.124-1) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../119-libdrm-amdgpu1_2.4.124-1_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.124-1) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../120-libnuma1_2.0.18-1+b1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.18-1+b1) ... Selecting previously unselected package libhsakmt1:amd64. Preparing to unpack .../121-libhsakmt1_6.2.4+ds-1_amd64.deb ... Unpacking libhsakmt1:amd64 (6.2.4+ds-1) ... Selecting previously unselected package libhsa-runtime64-1:amd64. Preparing to unpack .../122-libhsa-runtime64-1_6.1.2-3_amd64.deb ... Unpacking libhsa-runtime64-1:amd64 (6.1.2-3) ... Selecting previously unselected package libamdhip64-5. Preparing to unpack .../123-libamdhip64-5_5.7.1-5+b1_amd64.deb ... Unpacking libamdhip64-5 (5.7.1-5+b1) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../124-libavahi-common-data_0.8-16_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.8-16) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../125-libavahi-common3_0.8-16_amd64.deb ... Unpacking libavahi-common3:amd64 (0.8-16) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../126-libdbus-1-3_1.16.2-1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.16.2-1) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../127-libavahi-client3_0.8-16_amd64.deb ... Unpacking libavahi-client3:amd64 (0.8-16) ... Selecting previously unselected package libboost1.83-dev:amd64. Preparing to unpack .../128-libboost1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-atomic1.83.0:amd64. Preparing to unpack .../129-libboost-atomic1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-atomic1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-atomic1.83-dev:amd64. Preparing to unpack .../130-libboost-atomic1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-atomic1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-atomic-dev:amd64. Preparing to unpack .../131-libboost-atomic-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-atomic-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-chrono1.83.0t64:amd64. Preparing to unpack .../132-libboost-chrono1.83.0t64_1.83.0-4.1_amd64.deb ... Unpacking libboost-chrono1.83.0t64:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-chrono1.83-dev:amd64. Preparing to unpack .../133-libboost-chrono1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-chrono1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-chrono-dev:amd64. Preparing to unpack .../134-libboost-chrono-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-chrono-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-container1.83.0:amd64. Preparing to unpack .../135-libboost-container1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-container1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-container1.83-dev:amd64. Preparing to unpack .../136-libboost-container1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-container1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-container-dev:amd64. Preparing to unpack .../137-libboost-container-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-container-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-date-time1.83.0:amd64. Preparing to unpack .../138-libboost-date-time1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-date-time1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-serialization1.83.0:amd64. Preparing to unpack .../139-libboost-serialization1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-serialization1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-serialization1.83-dev:amd64. Preparing to unpack .../140-libboost-serialization1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-serialization1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-date-time1.83-dev:amd64. Preparing to unpack .../141-libboost-date-time1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-date-time1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-system1.83.0:amd64. Preparing to unpack .../142-libboost-system1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-system1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-system1.83-dev:amd64. Preparing to unpack .../143-libboost-system1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-system1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-thread1.83.0:amd64. Preparing to unpack .../144-libboost-thread1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-thread1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-thread1.83-dev:amd64. Preparing to unpack .../145-libboost-thread1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-thread1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-context1.83.0:amd64. Preparing to unpack .../146-libboost-context1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-context1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-context1.83-dev:amd64. Preparing to unpack .../147-libboost-context1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-context1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-context-dev:amd64. Preparing to unpack .../148-libboost-context-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-context-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-coroutine1.83.0:amd64. Preparing to unpack .../149-libboost-coroutine1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-coroutine1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-coroutine1.83-dev:amd64. Preparing to unpack .../150-libboost-coroutine1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-coroutine1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-coroutine-dev:amd64. Preparing to unpack .../151-libboost-coroutine-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-date-time-dev:amd64. Preparing to unpack .../152-libboost-date-time-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../153-libboost-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-exception1.83-dev:amd64. Preparing to unpack .../154-libboost-exception1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-exception1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-exception-dev:amd64. Preparing to unpack .../155-libboost-exception-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-exception-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-filesystem1.83.0:amd64. Preparing to unpack .../156-libboost-filesystem1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-filesystem1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-filesystem1.83-dev:amd64. Preparing to unpack .../157-libboost-filesystem1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-filesystem1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-fiber1.83.0:amd64. Preparing to unpack .../158-libboost-fiber1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-fiber1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-fiber1.83-dev:amd64. Preparing to unpack .../159-libboost-fiber1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-fiber1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-fiber-dev:amd64. Preparing to unpack .../160-libboost-fiber-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-filesystem-dev:amd64. Preparing to unpack .../161-libboost-filesystem-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-graph1.83.0:amd64. Preparing to unpack .../162-libboost-graph1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-graph1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-regex1.83.0:amd64. Preparing to unpack .../163-libboost-regex1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-regex1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libicu-dev:amd64. Preparing to unpack .../164-libicu-dev_72.1-6_amd64.deb ... Unpacking libicu-dev:amd64 (72.1-6) ... Selecting previously unselected package libboost-regex1.83-dev:amd64. Preparing to unpack .../165-libboost-regex1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-regex1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-test1.83.0:amd64. Preparing to unpack .../166-libboost-test1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-test1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-test1.83-dev:amd64. Preparing to unpack .../167-libboost-test1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-test1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-graph1.83-dev:amd64. Preparing to unpack .../168-libboost-graph1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-graph1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-graph-dev:amd64. Preparing to unpack .../169-libboost-graph-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-graph-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libevent-core-2.1-7t64:amd64. Preparing to unpack .../170-libevent-core-2.1-7t64_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. Preparing to unpack .../171-libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../172-libpsm-infinipath1_3.3+20.604758e7-6.3_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../173-libpsm2-2_11.2.185-2.1_amd64.deb ... Unpacking libpsm2-2 (11.2.185-2.1) ... Selecting previously unselected package librdmacm1t64:amd64. Preparing to unpack .../174-librdmacm1t64_55.0-1_amd64.deb ... Unpacking librdmacm1t64:amd64 (55.0-1) ... Selecting previously unselected package libfabric1:amd64. Preparing to unpack .../175-libfabric1_1.17.0-3.1_amd64.deb ... Unpacking libfabric1:amd64 (1.17.0-3.1) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../176-libhwloc15_2.12.0-1_amd64.deb ... Unpacking libhwloc15:amd64 (2.12.0-1) ... Selecting previously unselected package libmunge2:amd64. Preparing to unpack .../177-libmunge2_0.5.16-1_amd64.deb ... Unpacking libmunge2:amd64 (0.5.16-1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../178-libpciaccess0_0.17-3+b3_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3+b3) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../179-libxnvctrl0_535.171.04-1+b2_amd64.deb ... Unpacking libxnvctrl0:amd64 (535.171.04-1+b2) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../180-ocl-icd-libopencl1_2.3.2-1+b2_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../181-libhwloc-plugins_2.12.0-1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... Selecting previously unselected package libpmix2t64:amd64. Preparing to unpack .../182-libpmix2t64_5.0.6-3_amd64.deb ... Unpacking libpmix2t64:amd64 (5.0.6-3) ... Selecting previously unselected package libibumad3:amd64. Preparing to unpack .../183-libibumad3_55.0-1_amd64.deb ... Unpacking libibumad3:amd64 (55.0-1) ... Selecting previously unselected package libibmad5:amd64. Preparing to unpack .../184-libibmad5_55.0-1_amd64.deb ... Unpacking libibmad5:amd64 (55.0-1) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../185-libucx0_1.17.0+ds-3_amd64.deb ... Unpacking libucx0:amd64 (1.17.0+ds-3) ... Selecting previously unselected package libopenmpi40:amd64. Preparing to unpack .../186-libopenmpi40_5.0.7-1_amd64.deb ... Unpacking libopenmpi40:amd64 (5.0.7-1) ... Selecting previously unselected package libboost-mpi1.83.0. Preparing to unpack .../187-libboost-mpi1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-mpi1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-graph-parallel1.83.0. Preparing to unpack .../188-libboost-graph-parallel1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-graph-parallel1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-graph-parallel1.83-dev. Preparing to unpack .../189-libboost-graph-parallel1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-graph-parallel1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-graph-parallel-dev. Preparing to unpack .../190-libboost-graph-parallel-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-graph-parallel-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-iostreams1.83-dev:amd64. Preparing to unpack .../191-libboost-iostreams1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-iostreams1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-iostreams-dev:amd64. Preparing to unpack .../192-libboost-iostreams-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-json1.83.0:amd64. Preparing to unpack .../193-libboost-json1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-json1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-json1.83-dev:amd64. Preparing to unpack .../194-libboost-json1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-json1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-json-dev:amd64. Preparing to unpack .../195-libboost-json-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-json-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-locale1.83.0:amd64. Preparing to unpack .../196-libboost-locale1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-locale1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-locale1.83-dev:amd64. Preparing to unpack .../197-libboost-locale1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-locale1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-locale-dev:amd64. Preparing to unpack .../198-libboost-locale-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-locale-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-log1.83.0. Preparing to unpack .../199-libboost-log1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-log1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-log1.83-dev. Preparing to unpack .../200-libboost-log1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-log1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-log-dev. Preparing to unpack .../201-libboost-log-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-log-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-math1.83.0:amd64. Preparing to unpack .../202-libboost-math1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-math1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-math1.83-dev:amd64. Preparing to unpack .../203-libboost-math1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-math1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-math-dev:amd64. Preparing to unpack .../204-libboost-math-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-math-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../205-openmpi-common_5.0.7-1_all.deb ... Unpacking openmpi-common (5.0.7-1) ... Selecting previously unselected package libnl-3-dev:amd64. Preparing to unpack .../206-libnl-3-dev_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libnl-route-3-dev:amd64. Preparing to unpack .../207-libnl-route-3-dev_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libibverbs-dev:amd64. Preparing to unpack .../208-libibverbs-dev_55.0-1_amd64.deb ... Unpacking libibverbs-dev:amd64 (55.0-1) ... Selecting previously unselected package libnuma-dev:amd64. Preparing to unpack .../209-libnuma-dev_2.0.18-1+b1_amd64.deb ... Unpacking libnuma-dev:amd64 (2.0.18-1+b1) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../210-libltdl7_2.5.4-3_amd64.deb ... Unpacking libltdl7:amd64 (2.5.4-3) ... Selecting previously unselected package libltdl-dev:amd64. Preparing to unpack .../211-libltdl-dev_2.5.4-3_amd64.deb ... Unpacking libltdl-dev:amd64 (2.5.4-3) ... Selecting previously unselected package libhwloc-dev:amd64. Preparing to unpack .../212-libhwloc-dev_2.12.0-1_amd64.deb ... Unpacking libhwloc-dev:amd64 (2.12.0-1) ... Selecting previously unselected package libevent-2.1-7t64:amd64. Preparing to unpack .../213-libevent-2.1-7t64_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libevent-extra-2.1-7t64:amd64. Preparing to unpack .../214-libevent-extra-2.1-7t64_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libevent-openssl-2.1-7t64:amd64. Preparing to unpack .../215-libevent-openssl-2.1-7t64_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libevent-dev. Preparing to unpack .../216-libevent-dev_2.1.12-stable-10+b1_amd64.deb ... Unpacking libevent-dev (2.1.12-stable-10+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../217-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../218-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libpmix-dev:amd64. Preparing to unpack .../219-libpmix-dev_5.0.6-3_amd64.deb ... Unpacking libpmix-dev:amd64 (5.0.6-3) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../220-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../221-openmpi-bin_5.0.7-1_amd64.deb ... Unpacking openmpi-bin (5.0.7-1) ... Selecting previously unselected package libopenmpi-dev:amd64. Preparing to unpack .../222-libopenmpi-dev_5.0.7-1_amd64.deb ... Unpacking libopenmpi-dev:amd64 (5.0.7-1) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../223-mpi-default-dev_1.18_amd64.deb ... Unpacking mpi-default-dev (1.18) ... Selecting previously unselected package libboost-mpi1.83-dev. Preparing to unpack .../224-libboost-mpi1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-mpi1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-mpi-dev. Preparing to unpack .../225-libboost-mpi-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-mpi-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-python1.83.0. Preparing to unpack .../226-libboost-python1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-python1.83.0 (1.83.0-4.1) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../227-mpi-default-bin_1.18_amd64.deb ... Unpacking mpi-default-bin (1.18) ... Selecting previously unselected package libboost-mpi-python1.83.0. Preparing to unpack .../228-libboost-mpi-python1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-mpi-python1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-mpi-python1.83-dev. Preparing to unpack .../229-libboost-mpi-python1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-mpi-python1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-mpi-python-dev. Preparing to unpack .../230-libboost-mpi-python-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-mpi-python-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-nowide1.83.0. Preparing to unpack .../231-libboost-nowide1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-nowide1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-nowide1.83-dev. Preparing to unpack .../232-libboost-nowide1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-nowide1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-nowide-dev. Preparing to unpack .../233-libboost-nowide-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-nowide-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-numpy1.83.0. Preparing to unpack .../234-libboost-numpy1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-numpy1.83.0 (1.83.0-4.1) ... Selecting previously unselected package libboost-numpy1.83-dev. Preparing to unpack .../235-libboost-numpy1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-numpy1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-numpy-dev. Preparing to unpack .../236-libboost-numpy-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-numpy-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-program-options1.83.0:amd64. Preparing to unpack .../237-libboost-program-options1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-program-options1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-program-options1.83-dev:amd64. Preparing to unpack .../238-libboost-program-options1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-program-options1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-program-options-dev:amd64. Preparing to unpack .../239-libboost-program-options-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libpython3.13:amd64. Preparing to unpack .../240-libpython3.13_3.13.2-1_amd64.deb ... Unpacking libpython3.13:amd64 (3.13.2-1) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../241-libexpat1-dev_2.6.4-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.6.4-1) ... Selecting previously unselected package libpython3.13-dev:amd64. Preparing to unpack .../242-libpython3.13-dev_3.13.2-1_amd64.deb ... Unpacking libpython3.13-dev:amd64 (3.13.2-1) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../243-libpython3-dev_3.13.2-1_amd64.deb ... Unpacking libpython3-dev:amd64 (3.13.2-1) ... Selecting previously unselected package python3.13-dev. Preparing to unpack .../244-python3.13-dev_3.13.2-1_amd64.deb ... Unpacking python3.13-dev (3.13.2-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../245-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../246-libjs-sphinxdoc_8.1.3-5_all.deb ... Unpacking libjs-sphinxdoc (8.1.3-5) ... Selecting previously unselected package python3-dev. Preparing to unpack .../247-python3-dev_3.13.2-1_amd64.deb ... Unpacking python3-dev (3.13.2-1) ... Selecting previously unselected package libboost-python1.83-dev. Preparing to unpack .../248-libboost-python1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-python1.83-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-python-dev. Preparing to unpack .../249-libboost-python-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-python-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-random1.83.0:amd64. Preparing to unpack .../250-libboost-random1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-random1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-random1.83-dev:amd64. Preparing to unpack .../251-libboost-random1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-random1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-random-dev:amd64. Preparing to unpack .../252-libboost-random-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-random-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-regex-dev:amd64. Preparing to unpack .../253-libboost-regex-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-regex-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-serialization-dev:amd64. Preparing to unpack .../254-libboost-serialization-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-stacktrace1.83.0:amd64. Preparing to unpack .../255-libboost-stacktrace1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-stacktrace1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-stacktrace1.83-dev:amd64. Preparing to unpack .../256-libboost-stacktrace1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-stacktrace1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-stacktrace-dev:amd64. Preparing to unpack .../257-libboost-stacktrace-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-stacktrace-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-system-dev:amd64. Preparing to unpack .../258-libboost-system-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-system-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-test-dev:amd64. Preparing to unpack .../259-libboost-test-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-test-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-thread-dev:amd64. Preparing to unpack .../260-libboost-thread-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-thread-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-timer1.83.0:amd64. Preparing to unpack .../261-libboost-timer1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-timer1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-timer1.83-dev:amd64. Preparing to unpack .../262-libboost-timer1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-timer1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-timer-dev:amd64. Preparing to unpack .../263-libboost-timer-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-timer-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost1.83-tools-dev. Preparing to unpack .../264-libboost1.83-tools-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost1.83-tools-dev (1.83.0-4.1) ... Selecting previously unselected package libboost-tools-dev. Preparing to unpack .../265-libboost-tools-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-tools-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-type-erasure1.83.0:amd64. Preparing to unpack .../266-libboost-type-erasure1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-type-erasure1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-type-erasure1.83-dev:amd64. Preparing to unpack .../267-libboost-type-erasure1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-type-erasure1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-type-erasure-dev:amd64. Preparing to unpack .../268-libboost-type-erasure-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-url1.83.0:amd64. Preparing to unpack .../269-libboost-url1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-url1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-url1.83-dev:amd64. Preparing to unpack .../270-libboost-url1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-url1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-url-dev:amd64. Preparing to unpack .../271-libboost-url-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-url-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-wave1.83.0:amd64. Preparing to unpack .../272-libboost-wave1.83.0_1.83.0-4.1_amd64.deb ... Unpacking libboost-wave1.83.0:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-wave1.83-dev:amd64. Preparing to unpack .../273-libboost-wave1.83-dev_1.83.0-4.1_amd64.deb ... Unpacking libboost-wave1.83-dev:amd64 (1.83.0-4.1) ... Selecting previously unselected package libboost-wave-dev:amd64. Preparing to unpack .../274-libboost-wave-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-wave-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-all-dev. Preparing to unpack .../275-libboost-all-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-all-dev (1.83.0.2+b2) ... Selecting previously unselected package libcups2t64:amd64. Preparing to unpack .../276-libcups2t64_2.4.10-2+b1_amd64.deb ... Unpacking libcups2t64:amd64 (2.4.10-2+b1) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../277-libdeflate0_1.23-1+b1_amd64.deb ... Unpacking libdeflate0:amd64 (1.23-1+b1) ... Selecting previously unselected package libdeflate-dev:amd64. Preparing to unpack .../278-libdeflate-dev_1.23-1+b1_amd64.deb ... Unpacking libdeflate-dev:amd64 (1.23-1+b1) ... Selecting previously unselected package libdouble-conversion3:amd64. Preparing to unpack .../279-libdouble-conversion3_3.3.1-1_amd64.deb ... Unpacking libdouble-conversion3:amd64 (3.3.1-1) ... Selecting previously unselected package libdrm-intel1:amd64. Preparing to unpack .../280-libdrm-intel1_2.4.124-1_amd64.deb ... Unpacking libdrm-intel1:amd64 (2.4.124-1) ... Selecting previously unselected package libdrm-radeon1:amd64. Preparing to unpack .../281-libdrm-radeon1_2.4.124-1_amd64.deb ... Unpacking libdrm-radeon1:amd64 (2.4.124-1) ... Selecting previously unselected package libglvnd0:amd64. Preparing to unpack .../282-libglvnd0_1.7.0-1+b2_amd64.deb ... Unpacking libglvnd0:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libwayland-server0:amd64. Preparing to unpack .../283-libwayland-server0_1.23.1-3_amd64.deb ... Unpacking libwayland-server0:amd64 (1.23.1-3) ... Selecting previously unselected package libglapi-mesa:amd64. Preparing to unpack .../284-libglapi-mesa_24.3.4-3_amd64.deb ... Unpacking libglapi-mesa:amd64 (24.3.4-3) ... Selecting previously unselected package libllvm19:amd64. Preparing to unpack .../285-libllvm19_1%3a19.1.7-1+b1_amd64.deb ... Unpacking libllvm19:amd64 (1:19.1.7-1+b1) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../286-libsensors-config_1%3a3.6.0-10_all.deb ... Unpacking libsensors-config (1:3.6.0-10) ... Selecting previously unselected package libsensors5:amd64. Preparing to unpack .../287-libsensors5_1%3a3.6.0-10+b1_amd64.deb ... Unpacking libsensors5:amd64 (1:3.6.0-10+b1) ... Selecting previously unselected package libx11-xcb1:amd64. Preparing to unpack .../288-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... Selecting previously unselected package libxcb-dri3-0:amd64. Preparing to unpack .../289-libxcb-dri3-0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-present0:amd64. Preparing to unpack .../290-libxcb-present0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-present0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-randr0:amd64. Preparing to unpack .../291-libxcb-randr0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-randr0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-sync1:amd64. Preparing to unpack .../292-libxcb-sync1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-sync1:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xfixes0:amd64. Preparing to unpack .../293-libxcb-xfixes0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-xfixes0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxshmfence1:amd64. Preparing to unpack .../294-libxshmfence1_1.3-1+b3_amd64.deb ... Unpacking libxshmfence1:amd64 (1.3-1+b3) ... Selecting previously unselected package mesa-libgallium:amd64. Preparing to unpack .../295-mesa-libgallium_24.3.4-3_amd64.deb ... Unpacking mesa-libgallium:amd64 (24.3.4-3) ... Selecting previously unselected package libgbm1:amd64. Preparing to unpack .../296-libgbm1_24.3.4-3_amd64.deb ... Unpacking libgbm1:amd64 (24.3.4-3) ... Selecting previously unselected package libwayland-client0:amd64. Preparing to unpack .../297-libwayland-client0_1.23.1-3_amd64.deb ... Unpacking libwayland-client0:amd64 (1.23.1-3) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../298-libxcb-shm0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libegl-mesa0:amd64. Preparing to unpack .../299-libegl-mesa0_24.3.4-3_amd64.deb ... Unpacking libegl-mesa0:amd64 (24.3.4-3) ... Selecting previously unselected package libegl1:amd64. Preparing to unpack .../300-libegl1_1.7.0-1+b2_amd64.deb ... Unpacking libegl1:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libxcb-glx0:amd64. Preparing to unpack .../301-libxcb-glx0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-glx0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxxf86vm1:amd64. Preparing to unpack .../302-libxxf86vm1_1%3a1.1.4-1+b4_amd64.deb ... Unpacking libxxf86vm1:amd64 (1:1.1.4-1+b4) ... Selecting previously unselected package libvulkan1:amd64. Preparing to unpack .../303-libvulkan1_1.4.304.0-1_amd64.deb ... Unpacking libvulkan1:amd64 (1.4.304.0-1) ... Selecting previously unselected package libgl1-mesa-dri:amd64. Preparing to unpack .../304-libgl1-mesa-dri_24.3.4-3_amd64.deb ... Unpacking libgl1-mesa-dri:amd64 (24.3.4-3) ... Selecting previously unselected package libglx-mesa0:amd64. Preparing to unpack .../305-libglx-mesa0_24.3.4-3_amd64.deb ... Unpacking libglx-mesa0:amd64 (24.3.4-3) ... Selecting previously unselected package libglx0:amd64. Preparing to unpack .../306-libglx0_1.7.0-1+b2_amd64.deb ... Unpacking libglx0:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libgl1:amd64. Preparing to unpack .../307-libgl1_1.7.0-1+b2_amd64.deb ... Unpacking libgl1:amd64 (1.7.0-1+b2) ... Selecting previously unselected package xorg-sgml-doctools. Preparing to unpack .../308-xorg-sgml-doctools_1%3a1.11-1.1_all.deb ... Unpacking xorg-sgml-doctools (1:1.11-1.1) ... Selecting previously unselected package x11proto-dev. Preparing to unpack .../309-x11proto-dev_2024.1-1_all.deb ... Unpacking x11proto-dev (2024.1-1) ... Selecting previously unselected package libxau-dev:amd64. Preparing to unpack .../310-libxau-dev_1%3a1.0.11-1_amd64.deb ... Unpacking libxau-dev:amd64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp-dev:amd64. Preparing to unpack .../311-libxdmcp-dev_1%3a1.1.5-1_amd64.deb ... Unpacking libxdmcp-dev:amd64 (1:1.1.5-1) ... Selecting previously unselected package xtrans-dev. Preparing to unpack .../312-xtrans-dev_1.4.0-1_all.deb ... Unpacking xtrans-dev (1.4.0-1) ... Selecting previously unselected package libxcb1-dev:amd64. Preparing to unpack .../313-libxcb1-dev_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1-dev:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-dev:amd64. Preparing to unpack .../314-libx11-dev_2%3a1.8.10-2_amd64.deb ... Unpacking libx11-dev:amd64 (2:1.8.10-2) ... Selecting previously unselected package libglx-dev:amd64. Preparing to unpack .../315-libglx-dev_1.7.0-1+b2_amd64.deb ... Unpacking libglx-dev:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libgl-dev:amd64. Preparing to unpack .../316-libgl-dev_1.7.0-1+b2_amd64.deb ... Unpacking libgl-dev:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libegl-dev:amd64. Preparing to unpack .../317-libegl-dev_1.7.0-1+b2_amd64.deb ... Unpacking libegl-dev:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../318-libpkgconf3_1.8.1-4_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../319-pkgconf-bin_1.8.1-4_amd64.deb ... Unpacking pkgconf-bin (1.8.1-4) ... Selecting previously unselected package pkgconf:amd64. Preparing to unpack .../320-pkgconf_1.8.1-4_amd64.deb ... Unpacking pkgconf:amd64 (1.8.1-4) ... Selecting previously unselected package pkg-config:amd64. Preparing to unpack .../321-pkg-config_1.8.1-4_amd64.deb ... Unpacking pkg-config:amd64 (1.8.1-4) ... Selecting previously unselected package libeigen3-dev. Preparing to unpack .../322-libeigen3-dev_3.4.0-4_all.deb ... Unpacking libeigen3-dev (3.4.0-4) ... Selecting previously unselected package libevdev2:amd64. Preparing to unpack .../323-libevdev2_1.13.3+dfsg-1_amd64.deb ... Unpacking libevdev2:amd64 (1.13.3+dfsg-1) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../324-libfftw3-double3_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.10-2+b1) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../325-libfftw3-long3_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.10-2+b1) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../326-libfftw3-quad3_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.10-2+b1) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../327-libfftw3-single3_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.10-2+b1) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../328-libfftw3-bin_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-bin (3.3.10-2+b1) ... Selecting previously unselected package libfftw3-dev:amd64. Preparing to unpack .../329-libfftw3-dev_3.3.10-2+b1_amd64.deb ... Unpacking libfftw3-dev:amd64 (3.3.10-2+b1) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../330-libfribidi0_1.0.16-1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.16-1) ... Selecting previously unselected package libgpg-error0:amd64. Preparing to unpack .../331-libgpg-error0_1.51-3_amd64.deb ... Unpacking libgpg-error0:amd64 (1.51-3) ... Selecting previously unselected package libgcrypt20:amd64. Preparing to unpack .../332-libgcrypt20_1.11.0-7_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.0-7) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../333-libglib2.0-0t64_2.83.4-1_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.83.4-1) ... Selecting previously unselected package libopengl0:amd64. Preparing to unpack .../334-libopengl0_1.7.0-1+b2_amd64.deb ... Unpacking libopengl0:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libglu1-mesa:amd64. Preparing to unpack .../335-libglu1-mesa_9.0.2-1.1+b3_amd64.deb ... Unpacking libglu1-mesa:amd64 (9.0.2-1.1+b3) ... Selecting previously unselected package libopengl-dev:amd64. Preparing to unpack .../336-libopengl-dev_1.7.0-1+b2_amd64.deb ... Unpacking libopengl-dev:amd64 (1.7.0-1+b2) ... Selecting previously unselected package libglu1-mesa-dev:amd64. Preparing to unpack .../337-libglu1-mesa-dev_9.0.2-1.1+b3_amd64.deb ... Unpacking libglu1-mesa-dev:amd64 (9.0.2-1.1+b3) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../338-libgraphite2-3_1.3.14-2+b1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-2+b1) ... Selecting previously unselected package libgudev-1.0-0:amd64. Preparing to unpack .../339-libgudev-1.0-0_238-6_amd64.deb ... Unpacking libgudev-1.0-0:amd64 (238-6) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../340-libharfbuzz0b_10.2.0-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../341-libice6_2%3a1.1.1-1_amd64.deb ... Unpacking libice6:amd64 (2:1.1.1-1) ... Selecting previously unselected package libimagequant0:amd64. Preparing to unpack .../342-libimagequant0_2.18.0-1+b2_amd64.deb ... Unpacking libimagequant0:amd64 (2.18.0-1+b2) ... Selecting previously unselected package libwacom-common. Preparing to unpack .../343-libwacom-common_2.14.0-1_all.deb ... Unpacking libwacom-common (2.14.0-1) ... Selecting previously unselected package libwacom9:amd64. Preparing to unpack .../344-libwacom9_2.14.0-1_amd64.deb ... Unpacking libwacom9:amd64 (2.14.0-1) ... Selecting previously unselected package libinput-bin. Preparing to unpack .../345-libinput-bin_1.27.1-1_amd64.deb ... Unpacking libinput-bin (1.27.1-1) ... Selecting previously unselected package libmtdev1t64:amd64. Preparing to unpack .../346-libmtdev1t64_1.1.7-1_amd64.deb ... Unpacking libmtdev1t64:amd64 (1.1.7-1) ... Selecting previously unselected package libinput10:amd64. Preparing to unpack .../347-libinput10_1.27.1-1_amd64.deb ... Unpacking libinput10:amd64 (1.27.1-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../348-libjbig0_2.1-6.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b2) ... Selecting previously unselected package libjbig-dev:amd64. Preparing to unpack .../349-libjbig-dev_2.1-6.1+b2_amd64.deb ... Unpacking libjbig-dev:amd64 (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../350-libjpeg62-turbo_1%3a2.1.5-3.1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3.1) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../351-libjpeg62-turbo-dev_1%3a2.1.5-3.1_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:2.1.5-3.1) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../352-libjpeg-dev_1%3a2.1.5-3.1_amd64.deb ... Unpacking libjpeg-dev:amd64 (1:2.1.5-3.1) ... Selecting previously unselected package liblbfgsb0:amd64. Preparing to unpack .../353-liblbfgsb0_3.0+dfsg.4-1+b2_amd64.deb ... Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../354-liblcms2-2_2.16-2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.16-2) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../355-liblerc4_4.0.0+ds-5_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-5) ... Selecting previously unselected package liblerc-dev:amd64. Preparing to unpack .../356-liblerc-dev_4.0.0+ds-5_amd64.deb ... Unpacking liblerc-dev:amd64 (4.0.0+ds-5) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../357-liblzma-dev_5.6.4-1_amd64.deb ... Unpacking liblzma-dev:amd64 (5.6.4-1) ... Selecting previously unselected package libmd4c0:amd64. Preparing to unpack .../358-libmd4c0_0.5.2-2+b1_amd64.deb ... Unpacking libmd4c0:amd64 (0.5.2-2+b1) ... Selecting previously unselected package libopenjp2-7:amd64. Preparing to unpack .../359-libopenjp2-7_2.5.3-1_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.5.3-1) ... Selecting previously unselected package libopenmm8.1. Preparing to unpack .../360-libopenmm8.1_8.1.2+dfsg-4+b1_amd64.deb ... Unpacking libopenmm8.1 (8.1.2+dfsg-4+b1) ... Selecting previously unselected package libopenmm-dev. Preparing to unpack .../361-libopenmm-dev_8.1.2+dfsg-4+b1_amd64.deb ... Unpacking libopenmm-dev (8.1.2+dfsg-4+b1) ... Selecting previously unselected package libopenmm-plugins. Preparing to unpack .../362-libopenmm-plugins_8.1.2+dfsg-4+b1_amd64.deb ... Unpacking libopenmm-plugins (8.1.2+dfsg-4+b1) ... Selecting previously unselected package libparasail8:amd64. Preparing to unpack .../363-libparasail8_2.6.2+dfsg-2_amd64.deb ... Unpacking libparasail8:amd64 (2.6.2+dfsg-2) ... Selecting previously unselected package libparasail-dev:amd64. Preparing to unpack .../364-libparasail-dev_2.6.2+dfsg-2_amd64.deb ... Unpacking libparasail-dev:amd64 (2.6.2+dfsg-2) ... Selecting previously unselected package libpcre2-16-0:amd64. Preparing to unpack .../365-libpcre2-16-0_10.45-1_amd64.deb ... Unpacking libpcre2-16-0:amd64 (10.45-1) ... Selecting previously unselected package libpng-dev:amd64. Preparing to unpack .../366-libpng-dev_1.6.47-1_amd64.deb ... Unpacking libpng-dev:amd64 (1.6.47-1) ... Selecting previously unselected package libqhull-r8.0:amd64. Preparing to unpack .../367-libqhull-r8.0_2020.2-6+b2_amd64.deb ... Unpacking libqhull-r8.0:amd64 (2020.2-6+b2) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../368-shared-mime-info_2.4-5+b2_amd64.deb ... Unpacking shared-mime-info (2.4-5+b2) ... Selecting previously unselected package libqt5core5t64:amd64. Preparing to unpack .../369-libqt5core5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5core5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5concurrent5t64:amd64. Preparing to unpack .../370-libqt5concurrent5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5concurrent5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5dbus5t64:amd64. Preparing to unpack .../371-libqt5dbus5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5dbus5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5network5t64:amd64. Preparing to unpack .../372-libqt5network5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5network5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../373-libsm6_2%3a1.2.4-1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.4-1) ... Selecting previously unselected package libxcb-icccm4:amd64. Preparing to unpack .../374-libxcb-icccm4_0.4.2-1_amd64.deb ... Unpacking libxcb-icccm4:amd64 (0.4.2-1) ... Selecting previously unselected package libxcb-util1:amd64. Preparing to unpack .../375-libxcb-util1_0.4.1-1_amd64.deb ... Unpacking libxcb-util1:amd64 (0.4.1-1) ... Selecting previously unselected package libxcb-image0:amd64. Preparing to unpack .../376-libxcb-image0_0.4.0-2+b2_amd64.deb ... Unpacking libxcb-image0:amd64 (0.4.0-2+b2) ... Selecting previously unselected package libxcb-keysyms1:amd64. Preparing to unpack .../377-libxcb-keysyms1_0.4.1-1_amd64.deb ... Unpacking libxcb-keysyms1:amd64 (0.4.1-1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../378-libxcb-render0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-render-util0:amd64. Preparing to unpack .../379-libxcb-render-util0_0.3.10-1_amd64.deb ... Unpacking libxcb-render-util0:amd64 (0.3.10-1) ... Selecting previously unselected package libxcb-shape0:amd64. Preparing to unpack .../380-libxcb-shape0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-shape0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xinerama0:amd64. Preparing to unpack .../381-libxcb-xinerama0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-xinerama0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xinput0:amd64. Preparing to unpack .../382-libxcb-xinput0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-xinput0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xkb1:amd64. Preparing to unpack .../383-libxcb-xkb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-xkb1:amd64 (1.17.0-2+b1) ... Selecting previously unselected package xkb-data. Preparing to unpack .../384-xkb-data_2.42-1_all.deb ... Unpacking xkb-data (2.42-1) ... Selecting previously unselected package libxkbcommon0:amd64. Preparing to unpack .../385-libxkbcommon0_1.7.0-2_amd64.deb ... Unpacking libxkbcommon0:amd64 (1.7.0-2) ... Selecting previously unselected package libxkbcommon-x11-0:amd64. Preparing to unpack .../386-libxkbcommon-x11-0_1.7.0-2_amd64.deb ... Unpacking libxkbcommon-x11-0:amd64 (1.7.0-2) ... Selecting previously unselected package libqt5gui5t64:amd64. Preparing to unpack .../387-libqt5gui5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5gui5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5widgets5t64:amd64. Preparing to unpack .../388-libqt5widgets5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5widgets5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5xml5t64:amd64. Preparing to unpack .../389-libqt5xml5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5xml5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5designer5:amd64. Preparing to unpack .../390-libqt5designer5_5.15.15-6_amd64.deb ... Unpacking libqt5designer5:amd64 (5.15.15-6) ... Selecting previously unselected package libqt5sql5t64:amd64. Preparing to unpack .../391-libqt5sql5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5sql5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5help5:amd64. Preparing to unpack .../392-libqt5help5_5.15.15-6_amd64.deb ... Unpacking libqt5help5:amd64 (5.15.15-6) ... Selecting previously unselected package libqt5opengl5t64:amd64. Preparing to unpack .../393-libqt5opengl5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5opengl5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5printsupport5t64:amd64. Preparing to unpack .../394-libqt5printsupport5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5printsupport5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5test5t64:amd64. Preparing to unpack .../395-libqt5test5t64_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5test5t64:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libvulkan-dev:amd64. Preparing to unpack .../396-libvulkan-dev_1.4.304.0-1_amd64.deb ... Unpacking libvulkan-dev:amd64 (1.4.304.0-1) ... Selecting previously unselected package libxext-dev:amd64. Preparing to unpack .../397-libxext-dev_2%3a1.3.4-1+b3_amd64.deb ... Unpacking libxext-dev:amd64 (2:1.3.4-1+b3) ... Selecting previously unselected package qt5-qmake-bin. Preparing to unpack .../398-qt5-qmake-bin_5.15.15+dfsg-4_amd64.deb ... Unpacking qt5-qmake-bin (5.15.15+dfsg-4) ... Selecting previously unselected package qtchooser. Preparing to unpack .../399-qtchooser_66-2_amd64.deb ... Unpacking qtchooser (66-2) ... Selecting previously unselected package qt5-qmake:amd64. Preparing to unpack .../400-qt5-qmake_5.15.15+dfsg-4_amd64.deb ... Unpacking qt5-qmake:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package qtbase5-dev-tools. Preparing to unpack .../401-qtbase5-dev-tools_5.15.15+dfsg-4_amd64.deb ... Unpacking qtbase5-dev-tools (5.15.15+dfsg-4) ... Selecting previously unselected package qtbase5-dev:amd64. Preparing to unpack .../402-qtbase5-dev_5.15.15+dfsg-4_amd64.deb ... Unpacking qtbase5-dev:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libqt5opengl5-dev:amd64. Preparing to unpack .../403-libqt5opengl5-dev_5.15.15+dfsg-4_amd64.deb ... Unpacking libqt5opengl5-dev:amd64 (5.15.15+dfsg-4) ... Selecting previously unselected package libraqm0:amd64. Preparing to unpack .../404-libraqm0_0.10.2-1_amd64.deb ... Unpacking libraqm0:amd64 (0.10.2-1) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../405-libsharpyuv0_1.5.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... Selecting previously unselected package libsharpyuv-dev:amd64. Preparing to unpack .../406-libsharpyuv-dev_1.5.0-0.1_amd64.deb ... Unpacking libsharpyuv-dev:amd64 (1.5.0-0.1) ... Selecting previously unselected package libsqlite3-dev:amd64. Preparing to unpack .../407-libsqlite3-dev_3.46.1-1_amd64.deb ... Unpacking libsqlite3-dev:amd64 (3.46.1-1) ... Selecting previously unselected package libzstd-dev:amd64. Preparing to unpack .../408-libzstd-dev_1.5.6+dfsg-2_amd64.deb ... Unpacking libzstd-dev:amd64 (1.5.6+dfsg-2) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../409-libwebp7_1.5.0-0.1_amd64.deb ... Unpacking libwebp7:amd64 (1.5.0-0.1) ... Selecting previously unselected package libwebpdemux2:amd64. Preparing to unpack .../410-libwebpdemux2_1.5.0-0.1_amd64.deb ... Unpacking libwebpdemux2:amd64 (1.5.0-0.1) ... Selecting previously unselected package libwebpmux3:amd64. Preparing to unpack .../411-libwebpmux3_1.5.0-0.1_amd64.deb ... Unpacking libwebpmux3:amd64 (1.5.0-0.1) ... Selecting previously unselected package libwebpdecoder3:amd64. Preparing to unpack .../412-libwebpdecoder3_1.5.0-0.1_amd64.deb ... Unpacking libwebpdecoder3:amd64 (1.5.0-0.1) ... Selecting previously unselected package libwebp-dev:amd64. Preparing to unpack .../413-libwebp-dev_1.5.0-0.1_amd64.deb ... Unpacking libwebp-dev:amd64 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../414-libtiff6_4.5.1+git230720-5_amd64.deb ... Unpacking libtiff6:amd64 (4.5.1+git230720-5) ... Selecting previously unselected package libtiffxx6:amd64. Preparing to unpack .../415-libtiffxx6_4.5.1+git230720-5_amd64.deb ... Unpacking libtiffxx6:amd64 (4.5.1+git230720-5) ... Selecting previously unselected package libtiff-dev:amd64. Preparing to unpack .../416-libtiff-dev_4.5.1+git230720-5_amd64.deb ... Unpacking libtiff-dev:amd64 (4.5.1+git230720-5) ... Selecting previously unselected package libxslt1.1:amd64. Preparing to unpack .../417-libxslt1.1_1.1.35-1.1+b1_amd64.deb ... Unpacking libxslt1.1:amd64 (1.1.35-1.1+b1) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../418-python-matplotlib-data_3.8.3-7_all.deb ... Unpacking python-matplotlib-data (3.8.3-7) ... Selecting previously unselected package python3-attr. Preparing to unpack .../419-python3-attr_25.1.0-1_all.deb ... Unpacking python3-attr (25.1.0-1) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../420-python3-brotli_1.1.0-2+b7_amd64.deb ... Unpacking python3-brotli (1.1.0-2+b7) ... Selecting previously unselected package python3-contourpy. Preparing to unpack .../421-python3-contourpy_1.3.1-1+b1_amd64.deb ... Unpacking python3-contourpy (1.3.1-1+b1) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../422-python3-cycler_0.12.1-1_all.deb ... Unpacking python3-cycler (0.12.1-1) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../423-python3-dateutil_2.9.0-3_all.deb ... Unpacking python3-dateutil (2.9.0-3) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../424-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../425-python3-pytz_2025.1-3_all.deb ... Unpacking python3-pytz (2025.1-3) ... Selecting previously unselected package python3-tz. Preparing to unpack .../426-python3-tz_2025.1-3_all.deb ... Unpacking python3-tz (2025.1-3) ... Selecting previously unselected package python3-platformdirs. Preparing to unpack .../427-python3-platformdirs_4.3.6-1_all.deb ... Unpacking python3-platformdirs (4.3.6-1) ... Selecting previously unselected package python3-fs. Preparing to unpack .../428-python3-fs_2.4.16-6_all.deb ... Unpacking python3-fs (2.4.16-6) ... Selecting previously unselected package python3-lxml:amd64. Preparing to unpack .../429-python3-lxml_5.3.1-1+b1_amd64.deb ... Unpacking python3-lxml:amd64 (5.3.1-1+b1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../430-python3-lz4_4.4.0+dfsg-1+b1_amd64.deb ... Unpacking python3-lz4 (4.4.0+dfsg-1+b1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../431-python3-scipy_1.14.1-4+b1_amd64.deb ... Unpacking python3-scipy (1.14.1-4+b1) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../432-python3-mpmath_1.3.0-1_all.deb ... Unpacking python3-mpmath (1.3.0-1) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../433-python3-sympy_1.13.3-5_all.deb ... Unpacking python3-sympy (1.13.3-5) ... Selecting previously unselected package python3-ufolib2. Preparing to unpack .../434-python3-ufolib2_0.17.0+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.17.0+dfsg1-1) ... Selecting previously unselected package python3-unicodedata2. Preparing to unpack .../435-python3-unicodedata2_15.1.0+ds-1+b4_amd64.deb ... Unpacking python3-unicodedata2 (15.1.0+ds-1+b4) ... Selecting previously unselected package unicode-data. Preparing to unpack .../436-unicode-data_15.1.0-1_all.deb ... Unpacking unicode-data (15.1.0-1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../437-python3-fonttools_4.55.3-2+b1_amd64.deb ... Unpacking python3-fonttools (4.55.3-2+b1) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../438-python3-kiwisolver_1.4.7-3+b1_amd64.deb ... Unpacking python3-kiwisolver (1.4.7-3+b1) ... Selecting previously unselected package python3-pil:amd64. Preparing to unpack .../439-python3-pil_11.1.0-5+b1_amd64.deb ... Unpacking python3-pil:amd64 (11.1.0-5+b1) ... Selecting previously unselected package python3.12-tk. Preparing to unpack .../440-python3.12-tk_3.12.9-1_amd64.deb ... Unpacking python3.12-tk (3.12.9-1) ... Selecting previously unselected package python3.13-tk. Preparing to unpack .../441-python3.13-tk_3.13.2-1_amd64.deb ... Unpacking python3.13-tk (3.13.2-1) ... Selecting previously unselected package python3-tk:amd64. Preparing to unpack .../442-python3-tk_3.13.1-1+b1_amd64.deb ... Unpacking python3-tk:amd64 (3.13.1-1+b1) ... Selecting previously unselected package python3-pil.imagetk:amd64. Preparing to unpack .../443-python3-pil.imagetk_11.1.0-5+b1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (11.1.0-5+b1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../444-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../445-python3-packaging_24.2-1_all.deb ... Unpacking python3-packaging (24.2-1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../446-python3-matplotlib_3.8.3-7+b1_amd64.deb ... Unpacking python3-matplotlib (3.8.3-7+b1) ... Selecting previously unselected package python3-pyqt5.sip. Preparing to unpack .../447-python3-pyqt5.sip_12.17.0-1+b1_amd64.deb ... Unpacking python3-pyqt5.sip (12.17.0-1+b1) ... Selecting previously unselected package python3-pyqt5. Preparing to unpack .../448-python3-pyqt5_5.15.11+dfsg-2_amd64.deb ... Unpacking python3-pyqt5 (5.15.11+dfsg-2) ... Selecting previously unselected package voronota. Preparing to unpack .../449-voronota_1.29.4307+ds-1_amd64.deb ... Unpacking voronota (1.29.4307+ds-1) ... Setting up media-types (12.0.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libgraphite2-3:amd64 (1.3.14-2+b1) ... Setting up libboost-python1.83.0 (1.83.0-4.1) ... Setting up liblcms2-2:amd64 (2.16-2) ... Setting up libboost-program-options1.83.0:amd64 (1.83.0-4.1) ... Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... Setting up libpciaccess0:amd64 (0.17-3+b3) ... Setting up libxau6:amd64 (1:1.0.11-1) ... Setting up libxdmcp6:amd64 (1:1.1.5-1) ... Setting up libdouble-conversion3:amd64 (3.3.1-1) ... Setting up libboost-stacktrace1.83.0:amd64 (1.83.0-4.1) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libboost1.83-dev:amd64 (1.83.0-4.1) ... Setting up libxcb1:amd64 (1.17.0-2+b1) ... Setting up libfftw3-single3:amd64 (3.3.10-2+b1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up libxcb-xfixes0:amd64 (1.17.0-2+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-5) ... Setting up libzstd-dev:amd64 (1.5.6+dfsg-2) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libboost-nowide1.83.0 (1.83.0-4.1) ... Setting up libboost-date-time1.83.0:amd64 (1.83.0-4.1) ... Setting up libgpg-error0:amd64 (1.51-3) ... Setting up libxcb-xinput0:amd64 (1.17.0-2+b1) ... Setting up libparasail8:amd64 (2.6.2+dfsg-2) ... Setting up libboost-json1.83.0:amd64 (1.83.0-4.1) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libboost-timer1.83.0:amd64 (1.83.0-4.1) ... Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... Setting up libcbor0.10:amd64 (0.10.2-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:amd64 (1.7.0-1+b2) ... Setting up fonts-lyx (2.4.3-1) ... Setting up voronota (1.29.4307+ds-1) ... Setting up libboost-regex1.83.0:amd64 (1.83.0-4.1) ... Setting up libxcb-glx0:amd64 (1.17.0-2+b1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up libedit2:amd64 (3.1-20250104-1) ... Setting up libboost-system1.83.0:amd64 (1.83.0-4.1) ... Setting up libuv1t64:amd64 (1.50.0-2) ... Setting up libboost-context1.83.0:amd64 (1.83.0-4.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libxcb-keysyms1:amd64 (0.4.1-1) ... Setting up libboost-program-options1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-random1.83.0:amd64 (1.83.0-4.1) ... Setting up libxcb-shape0:amd64 (1.17.0-2+b1) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-10) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up libibumad3:amd64 (55.0-1) ... Setting up libdeflate0:amd64 (1.23-1+b1) ... Setting up libwebpdecoder3:amd64 (1.5.0-0.1) ... Setting up libboost-thread1.83.0:amd64 (1.83.0-4.1) ... Setting up libfftw3-long3:amd64 (3.3.10-2+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libgcrypt20:amd64 (1.11.0-7) ... Setting up libqhull-r8.0:amd64 (2020.2-6+b2) ... Setting up libxcb-render-util0:amd64 (0.3.10-1) ... Setting up xkb-data (2.42-1) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up libibmad5:amd64 (55.0-1) ... Setting up libxcb-icccm4:amd64 (0.4.2-1) ... Setting up libcom-err2:amd64 (1.47.2-1) ... Setting up file (1:5.45-3+b1) ... Setting up libparasail-dev:amd64 (2.6.2+dfsg-2) ... Setting up libboost-filesystem1.83.0:amd64 (1.83.0-4.1) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libboost-url1.83.0:amd64 (1.83.0-4.1) ... Setting up libpcre2-16-0:amd64 (10.45-1) ... Setting up libopengl0:amd64 (1.7.0-1+b2) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libxcb-util1:amd64 (0.4.1-1) ... Setting up libxcb-xkb1:amd64 (1.17.0-2+b1) ... Setting up libxcb-image0:amd64 (0.4.0-2+b2) ... Setting up libkrb5support0:amd64 (1.21.3-4) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Mar 9 12:11:42 UTC 2025. Universal Time is now: Sun Mar 9 12:11:42 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-4.1) ... Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... Setting up unicode-data (15.1.0-1) ... Setting up libboost-serialization1.83.0:amd64 (1.83.0-4.1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libboost-numpy1.83.0 (1.83.0-4.1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libblas3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb-xinerama0:amd64 (1.17.0-2+b1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libmunge2:amd64 (0.5.16-1) ... Setting up libexpat1-dev:amd64 (2.6.4-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3.1) ... Setting up qt5-qmake-bin (5.15.15+dfsg-4) ... Setting up libsqlite3-dev:amd64 (3.46.1-1) ... Setting up libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3.1) ... Setting up libboost-chrono1.83.0t64:amd64 (1.83.0-4.1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ... Setting up libjsoncpp26:amd64 (1.9.6-3) ... Setting up libavahi-common-data:amd64 (0.8-16) ... Setting up libdbus-1-3:amd64 (1.16.2-1) ... Setting up libfftw3-quad3:amd64 (3.3.10-2+b1) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libimagequant0:amd64 (2.18.0-1+b2) ... Setting up libproc2-0:amd64 (2:4.0.4-7) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libboost-nowide1.83-dev (1.83.0-4.1) ... Setting up libpng16-16t64:amd64 (1.6.47-1) ... Setting up libhwloc15:amd64 (2.12.0-1) ... Setting up python3-numpy-dev:amd64 (1:2.2.3+ds-2+b1) ... Setting up libboost-stacktrace1.83-dev:amd64 (1.83.0-4.1) ... Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... Setting up autopoint (0.23.1-1) ... Setting up libboost-numpy1.83-dev (1.83.0-4.1) ... Setting up icu-devtools (72.1-6) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... Setting up liblerc-dev:amd64 (4.0.0+ds-5) ... Setting up libk5crypto3:amd64 (1.21.3-4) ... Setting up libltdl7:amd64 (2.5.4-3) ... Setting up libfftw3-double3:amd64 (3.3.10-2+b1) ... Setting up libcifpp-data (7.0.9-1) ... Setting up libglapi-mesa:amd64 (24.3.4-3) ... Setting up libboost-test1.83.0:amd64 (1.83.0-4.1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:amd64 (14.2.0-17) ... Setting up libboost-fiber1.83.0:amd64 (1.83.0-4.1) ... Setting up libvulkan1:amd64 (1.4.304.0-1) ... Setting up libboost-atomic1.83-dev:amd64 (1.83.0-4.1) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:amd64 (1.8.0-1) ... Setting up libwebp7:amd64 (1.5.0-0.1) ... Setting up liblzma-dev:amd64 (5.6.4-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libffi8:amd64 (3.4.7-1) ... Setting up libboost-atomic-dev:amd64 (1.83.0.2+b2) ... Setting up libnuma1:amd64 (2.0.18-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up libmtdev1t64:amd64 (1.1.7-1) ... Setting up sensible-utils (0.0.24) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Setting up libxshmfence1:amd64 (1.3-1+b3) ... Setting up libboost-exception1.83-dev:amd64 (1.83.0-4.1) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ... Setting up libboost-stacktrace-dev:amd64 (1.83.0.2+b2) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-7) ... Setting up libnl-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libboost-graph1.83.0:amd64 (1.83.0-4.1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up openmpi-common (5.0.7-1) ... Setting up libtasn1-6:amd64 (4.20.0-2) ... Setting up clustalw (2.1+lgpl-7) ... Setting up libmd4c0:amd64 (0.5.2-2+b1) ... Setting up libboost-container1.83.0:amd64 (1.83.0-4.1) ... Setting up libopenjp2-7:amd64 (2.5.3-1) ... Setting up libx11-6:amd64 (2:1.8.10-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libboost-type-erasure1.83.0:amd64 (1.83.0-4.1) ... Setting up cmake-data (3.31.6-1) ... Setting up librhash1:amd64 (1.4.5-1) ... Setting up libkrb5-3:amd64 (1.21.3-4) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b3) ... Setting up libboost-system1.83-dev:amd64 (1.83.0-4.1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libboost-math1.83.0:amd64 (1.83.0-4.1) ... Setting up libopengl-dev:amd64 (1.7.0-1+b2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.15.0-1+b1) ... Setting up libsharpyuv-dev:amd64 (1.5.0-0.1) ... Setting up python-matplotlib-data (3.8.3-7) ... Setting up libwebpmux3:amd64 (1.5.0-0.1) ... Setting up libtiffxx6:amd64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:amd64 (1.23-1+b1) ... Setting up libopenmm8.1 (8.1.2+dfsg-4+b1) ... Setting up libdrm-common (2.4.124-1) ... Setting up libevdev2:amd64 (1.13.3+dfsg-1) ... Setting up readline-common (8.2-6) ... Setting up libicu-dev:amd64 (72.1-6) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Setting up libldap2:amd64 (2.6.9+dfsg-1) ... Setting up libboost1.83-tools-dev (1.83.0-4.1) ... Setting up qtchooser (66-2) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libwacom-common (2.14.0-1) ... Setting up libxkbcommon0:amd64 (1.7.0-2) ... Setting up libwayland-client0:amd64 (1.23.1-3) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:amd64 (14.2.0-17) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libllvm19:amd64 (1:19.1.7-1+b1) ... Setting up libwayland-server0:amd64 (1.23.1-3) ... Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... Setting up libice6:amd64 (2:1.1.1-1) ... Setting up liblapack3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-wave1.83.0:amd64 (1.83.0-4.1) ... Setting up gettext (0.23.1-1) ... Setting up libboost-coroutine1.83.0:amd64 (1.83.0-4.1) ... Setting up libxau-dev:amd64 (1:1.0.11-1) ... Setting up libboost-chrono1.83-dev:amd64 (1.83.0-4.1) ... Setting up qt5-qmake:amd64 (5.15.15+dfsg-4) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b4) ... Setting up libboost-math1.83-dev:amd64 (1.83.0-4.1) ... Setting up libtool (2.5.4-3) ... Setting up libboost-chrono-dev:amd64 (1.83.0.2+b2) ... Setting up libfftw3-bin (3.3.10-2+b1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libboost-log1.83.0 (1.83.0-4.1) ... Setting up fontconfig-config (2.15.0-2) ... Setting up libboost-math-dev:amd64 (1.83.0.2+b2) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libboost-system-dev:amd64 (1.83.0.2+b2) ... Setting up libpng-dev:amd64 (1.6.47-1) ... Setting up libavahi-common3:amd64 (0.8-16) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-4.1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3.1) ... Setting up libjbig-dev:amd64 (2.1-6.1+b2) ... Setting up libboost-locale1.83.0:amd64 (1.83.0-4.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up libboost-test1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-url1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-tools-dev (1.83.0.2+b2) ... Setting up libcifpp7:amd64 (7.0.9-1) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-exception-dev:amd64 (1.83.0.2+b2) ... Setting up dssp (4.4.10-1) ... Setting up libboost-nowide-dev (1.83.0.2+b2) ... Setting up libopenmm-dev (8.1.2+dfsg-4+b1) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1+b1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b2) ... Setting up libboost-test-dev:amd64 (1.83.0.2+b2) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.5.4-3) ... Setting up libxdmcp-dev:amd64 (1:1.1.5-1) ... Setting up libglib2.0-0t64:amd64 (2.83.4-1) ... No schema files found: doing nothing. Setting up libwebp-dev:amd64 (1.5.0-0.1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:amd64 (1.83.0-4.1) ... Setting up libllvm17t64:amd64 (1:17.0.6-21) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libtiff-dev:amd64 (4.5.1+git230720-5) ... Setting up libboost-container1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-4.1) ... Setting up shared-mime-info (2.4-5+b2) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up libboost-numpy-dev (1.83.0.2+b2) ... Setting up libxkbcommon-x11-0:amd64 (1.7.0-2) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-4) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-4.1) ... Setting up pkg-config:amd64 (1.8.1-4) ... Setting up libboost-random1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Setting up libjs-sphinxdoc (8.1.3-5) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libopenmm-plugins (8.1.2+dfsg-4+b1) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up libdrm2:amd64 (2.4.124-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up groff-base (1.23.0-7) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.2.0-1) ... Setting up libboost-url-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-dev:amd64 (2.12.0-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b3) ... Setting up libfontconfig1:amd64 (2.15.0-2) ... Setting up gfortran-14 (14.2.0-17) ... Setting up libboost-regex-dev:amd64 (1.83.0.2+b2) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libpython3.13-stdlib:amd64 (3.13.2-1) ... Setting up libfftw3-dev:amd64 (3.3.10-2+b1) ... Setting up libavahi-client3:amd64 (0.8-16) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libgudev-1.0-0:amd64 (238-6) ... Setting up libpython3-stdlib:amd64 (3.13.2-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.124-1) ... Setting up libpython3.13:amd64 (3.13.2-1) ... Setting up libgnutls30t64:amd64 (3.8.9-2) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-4.1) ... Setting up libibverbs1:amd64 (55.0-1) ... Setting up fontconfig (2.15.0-2) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b4) ... Setting up libboost-json1.83-dev:amd64 (1.83.0-4.1) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libboost-wave1.83-dev:amd64 (1.83.0-4.1) ... Setting up libboost-locale1.83-dev:amd64 (1.83.0-4.1) ... Setting up ibverbs-providers:amd64 (55.0-1) ... Setting up python3.13 (3.13.2-1) ... Setting up libwacom9:amd64 (2.14.0-1) ... Setting up libdrm-radeon1:amd64 (2.4.124-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-4.1) ... Setting up openssh-client (1:9.9p2-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.16-1) ... Setting up libdrm-intel1:amd64 (2.4.124-1) ... Setting up python3.12-tk (3.12.9-1) ... Setting up libboost-type-erasure1.83-dev:amd64 (1.83.0-4.1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libboost-random-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-locale-dev:amd64 (1.83.0.2+b2) ... Setting up python3 (3.13.2-1) ... Setting up libboost-wave-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up libhwloc-plugins:amd64 (2.12.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libboost-graph1.83-dev:amd64 (1.83.0-4.1) ... Setting up python3.13-tk (3.13.2-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up libboost-container-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Setting up libinput-bin (1.27.1-1) ... Setting up libboost-context1.83-dev:amd64 (1.83.0-4.1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libboost-coroutine1.83-dev:amd64 (1.83.0-4.1) ... Setting up libqt5core5t64:amd64 (5.15.15+dfsg-4) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up libboost-fiber1.83-dev:amd64 (1.83.0-4.1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up python3-brotli (1.1.0-2+b7) ... Setting up libraqm0:amd64 (0.10.2-1) ... Setting up libpython3.13-dev:amd64 (3.13.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up python3-kiwisolver (1.4.7-3+b1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up libpmix2t64:amd64 (5.0.6-3) ... Setting up python3-numpy (1:2.2.3+ds-2+b1) ... Setting up libxext-dev:amd64 (2:1.3.4-1+b3) ... Setting up python3-pyqt5.sip (12.17.0-1+b1) ... Setting up python3-lxml:amd64 (5.3.1-1+b1) ... Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-4) ... Setting up librdmacm1t64:amd64 (55.0-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-contourpy (1.3.1-1+b1) ... Setting up libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-log1.83-dev (1.83.0-4.1) ... Setting up libboost-json-dev:amd64 (1.83.0.2+b2) ... Setting up python3-mpmath (1.3.0-1) ... Setting up libboost-log-dev (1.83.0.2+b2) ... Setting up libcups2t64:amd64 (2.4.10-2+b1) ... Setting up libpmix-dev:amd64 (5.0.6-3) ... Setting up libhsakmt1:amd64 (6.2.4+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up libinput10:amd64 (1.27.1-1) ... Setting up python3-sympy (1.13.3-5) ... Setting up python3-attr (25.1.0-1) ... Setting up libboost-graph-dev:amd64 (1.83.0.2+b2) ... Setting up mesa-libgallium:amd64 (24.3.4-3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libvulkan-dev:amd64 (1.4.304.0-1) ... Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-4) ... Setting up python3-scipy (1.14.1-4+b1) ... Setting up libpython3-dev:amd64 (3.13.2-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcurl4t64:amd64 (8.12.1-3) ... Setting up libgbm1:amd64 (24.3.4-3) ... Setting up python3-lz4 (4.4.0+dfsg-1+b1) ... Setting up python3.13-dev (3.13.2-1) ... Setting up python3-unicodedata2 (15.1.0+ds-1+b4) ... Setting up libqt5concurrent5t64:amd64 (5.15.15+dfsg-4) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-typeguard (4.4.2-1) ... Setting up libgl1-mesa-dri:amd64 (24.3.4-3) ... Setting up libqt5network5t64:amd64 (5.15.15+dfsg-4) ... Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-4) ... Setting up python3-tk:amd64 (3.13.1-1+b1) ... Setting up debhelper (13.24.1) ... Setting up python3-pytz (2025.1-3) ... Setting up libboost-context-dev:amd64 (1.83.0.2+b2) ... Setting up libqt5test5t64:amd64 (5.15.15+dfsg-4) ... Setting up libibverbs-dev:amd64 (55.0-1) ... Setting up python3-tz (2025.1-3) ... Setting up python3-fs (2.4.16-6) ... Setting up python3-pil:amd64 (11.1.0-5+b1) ... Setting up qtbase5-dev-tools (5.15.15+dfsg-4) ... Setting up python3-inflect (7.3.1-2) ... Setting up libegl-mesa0:amd64 (24.3.4-3) ... Setting up python3-pil.imagetk:amd64 (11.1.0-5+b1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.13.2-1) ... Setting up libboost-python1.83-dev (1.83.0-4.1) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-3) ... Setting up libegl1:amd64 (1.7.0-1+b2) ... Setting up cmake (3.31.6-1) ... Setting up python3-pkg-resources (75.8.0-1) ... Setting up libglx-mesa0:amd64 (24.3.4-3) ... Setting up python3-setuptools (75.8.0-1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libamdhip64-5 (5.7.1-5+b1) ... Setting up libglx-dev:amd64 (1.7.0-1+b2) ... Setting up libgl-dev:amd64 (1.7.0-1+b2) ... Setting up dh-python (6.20250108) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up libegl-dev:amd64 (1.7.0-1+b2) ... Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-4) ... Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b3) ... Setting up libopenmpi40:amd64 (5.0.7-1) ... Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-4) ... Setting up libqt5help5:amd64 (5.15.15-6) ... Setting up libqt5opengl5t64:amd64 (5.15.15+dfsg-4) ... Setting up libboost-mpi1.83.0 (1.83.0-4.1) ... Setting up openmpi-bin (5.0.7-1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-4) ... Setting up libboost-graph-parallel1.83.0 (1.83.0-4.1) ... Setting up libqt5designer5:amd64 (5.15.15-6) ... Setting up mpi-default-bin (1.18) ... Setting up qtbase5-dev:amd64 (5.15.15+dfsg-4) ... Setting up libopenmpi-dev:amd64 (5.0.7-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libboost-graph-parallel1.83-dev (1.83.0-4.1) ... Setting up python3-pyqt5 (5.15.11+dfsg-2) ... Setting up libboost-mpi-python1.83.0 (1.83.0-4.1) ... Setting up libqt5opengl5-dev:amd64 (5.15.15+dfsg-4) ... Setting up libboost-graph-parallel-dev (1.83.0.2+b2) ... Setting up mpi-default-dev (1.18) ... Setting up libboost-mpi1.83-dev (1.83.0-4.1) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libboost-mpi-python1.83-dev (1.83.0-4.1) ... Setting up libboost-mpi-python-dev (1.83.0.2+b2) ... Setting up libboost-all-dev (1.83.0.2+b2) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Setting up python3-fonttools (4.55.3-2+b1) ... Setting up python3-matplotlib (3.8.3-7+b1) ... Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/openstructure-2.9.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openstructure_2.9.2-2_source.changes dpkg-buildpackage: info: source package openstructure dpkg-buildpackage: info: source version 2.9.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2' dh_auto_configure -- -DOPTIMIZE=ON -DUBUNTU_LAYOUT=ON -DENABLE_MM=ON -DOPEN_MM_PLUGIN_DIR=/usr/lib/x86_64-linux-gnu/openmm/plugins -DENABLE_PARASAIL=ON cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DOPTIMIZE=ON -DUBUNTU_LAYOUT=ON -DENABLE_MM=ON -DOPEN_MM_PLUGIN_DIR=/usr/lib/x86_64-linux-gnu/openmm/plugins -DENABLE_PARASAIL=ON .. -- The CXX compiler identification is GNU 14.2.0 -- The C compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done CMake Warning (dev) at cmake_support/OST.cmake:892 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): cmake_support/OST.cmake:921 (get_compiler_version) CMakeLists.txt:173 (setup_compiler_flags) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python: /usr/bin/python3 (found suitable version "3.13.2", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed CMake Warning (dev) at cmake_support/OST.cmake:955 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost package: python313 CMake Warning (dev) at cmake_support/OST.cmake:969 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: unit_test_framework CMake Warning (dev) at cmake_support/OST.cmake:976 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: filesystem system CMake Warning (dev) at cmake_support/OST.cmake:980 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: iostreams CMake Warning (dev) at cmake_support/OST.cmake:983 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: program_options CMake Warning (dev) at cmake_support/OST.cmake:986 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: regex CMake Warning (dev) at cmake_support/OST.cmake:989 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:190 (setup_boost) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: thread -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Found EIGEN: /usr/include/eigen3 (Required is at least version "3.2.0") -- Found SQLITE3: /usr/lib/x86_64-linux-gnu/libsqlite3.so (Required is at least version "3.7.13") -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.1") -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.47") -- Found FFTW: /usr/lib/x86_64-linux-gnu/libfftw3f.so -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.5.1") -- Found OpenMM: /usr/lib/x86_64-linux-gnu/libOpenMM.so -- Searching for python module PyQt5 for /usr/bin/python3 -- Found python module PyQt5 -- Searching for python module PyQt5.sip for /usr/bin/python3 -- Found python module PyQt5.sip CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/base/src/CMakeLists.txt:43 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:432 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/base/pymod/CMakeLists.txt:33 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:435 (copy_if_different) modules/base/pymod/CMakeLists.txt:33 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/bindings/src/CMakeLists.txt:13 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/bindings/src/CMakeLists.txt:13 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/bindings/pymod/CMakeLists.txt:27 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) modules/config/CMakeLists.txt:65 (stage_and_install_headers) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) modules/config/CMakeLists.txt:65 (stage_and_install_headers) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) modules/config/CMakeLists.txt:65 (stage_and_install_headers) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) modules/config/CMakeLists.txt:65 (stage_and_install_headers) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/config/CMakeLists.txt:65 (stage_and_install_headers) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/conop/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/conop/pymod/CMakeLists.txt:15 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/db/src/CMakeLists.txt:17 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/db/pymod/CMakeLists.txt:6 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/geom/src/CMakeLists.txt:55 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/geom/pymod/CMakeLists.txt:21 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gfx/src/CMakeLists.txt:193 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/src/CMakeLists.txt:244 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/src/CMakeLists.txt:244 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gfx/pymod/CMakeLists.txt:27 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/gui/src/CMakeLists.txt:443 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:26 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/share/CMakeLists.txt:31 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:93 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:101 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:111 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:111 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:111 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/gui/pymod/CMakeLists.txt:111 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/base/src/CMakeLists.txt:102 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/base/pymod/CMakeLists.txt:19 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/img/alg/src/CMakeLists.txt:95 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/img/alg/pymod/CMakeLists.txt:10 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/info/src/CMakeLists.txt:32 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/info/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/io/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/io/pymod/CMakeLists.txt:17 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/base/src/CMakeLists.txt:108 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/base/pymod/CMakeLists.txt:26 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/alg/src/CMakeLists.txt:65 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/src/CMakeLists.txt:71 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/src/CMakeLists.txt:76 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/pymod/CMakeLists.txt:42 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/alg/pymod/CMakeLists.txt:46 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/mol/mm/src/CMakeLists.txt:47 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/mm/src/CMakeLists.txt:55 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/mm/src/CMakeLists.txt:60 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/mol/mm/pymod/CMakeLists.txt:22 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/base/src/CMakeLists.txt:40 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/base/pymod/CMakeLists.txt:8 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:289 (copy_if_different) cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:291 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:267 (stage_and_install_headers) modules/seq/alg/src/CMakeLists.txt:49 (module) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:584 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:608 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:613 (copy_if_different) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:616 (compile_py_files) modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:617 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:5 (pymod) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:10 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:14 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): modules/seq/alg/pymod/CMakeLists.txt:18 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:435 (copy_if_different) scripts/CMakeLists.txt:23 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:435 (copy_if_different) scripts/CMakeLists.txt:25 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:435 (copy_if_different) scripts/CMakeLists.txt:28 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:432 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): scripts/CMakeLists.txt:33 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:435 (copy_if_different) scripts/CMakeLists.txt:33 (script) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): scripts/CMakeLists.txt:42 (copy_if_different) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at scripts/CMakeLists.txt:45 (install): Policy CMP0177 is not set: install() DESTINATION paths are normalized. Run "cmake --help-policy CMP0177" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:1016 (copy_if_different) actions/CMakeLists.txt:4 (ost_action) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:1016 (copy_if_different) actions/CMakeLists.txt:5 (ost_action) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command): The following keywords are not supported when using add_custom_command(TARGET): DEPENDS. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake_support/OST.cmake:1016 (copy_if_different) actions/CMakeLists.txt:6 (ost_action) This warning is for project developers. Use -Wno-dev to suppress it. -- OpenStructure will be built with the following options: Install Prefix (-DPREFIX) : /usr RPath in install (-DUSE_RPATH) : OFF Info support (-DENABLE_INFO) : ON Graphical interface (-DENABLE_GUI) : ON OpenGL support (-DENABLE_GFX) : ON Shader support (-DUSE_SHADER) : OFF SpaceNav Device support (-DENABLE_SPNAV) : OFF OpenMM support (-DENABLE_MM) : ON OpenMM plugins (-DOPEN_MM_PLUGIN_DIR) : /usr/lib/x86_64-linux-gnu/openmm/plugins Parasail alignment library (-DENABLE_PARASAIL) : ON Optimize (-DOPTIMIZE) : ON Profiling support (-DPROFILE) : OFF Double Precision (-DUSE_DOUBLE_PRECISION) : OFF Compound Lib (-DCOMPOUND_LIB) : NONE TMAlign and TMScore (-DCOMPILE_TMTOOLS) : OFF Static Libraries (-DENABLE_STATIC) : OFF Debian/Ubuntu directory layout (-DUBUNTU_LAYOUT) : ON Hidden object visibility (-DHIDDEN_VISIBILITY) : OFF -- Configuring done (5.9s) -- Generating done (4.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2' dh_auto_build cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.2 -B/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/depend make -f modules/base/pymod/CMakeFiles/subst___init__.py.dir/build.make modules/base/pymod/CMakeFiles/subst___init__.py.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/build.make modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/create_stage.dir/DependInfo.cmake "--color=" make -f modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/build.make modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/depend make -f modules/db/pymod/CMakeFiles/ost_db_pymod.dir/build.make modules/db/pymod/CMakeFiles/ost_db_pymod.dir/depend make -f modules/geom/pymod/CMakeFiles/ost_geom_pymod.dir/build.make modules/geom/pymod/CMakeFiles/ost_geom_pymod.dir/depend make -f modules/gfx/pymod/CMakeFiles/ost_gfx_pymod.dir/build.make modules/gfx/pymod/CMakeFiles/ost_gfx_pymod.dir/depend make -f modules/gui/share/CMakeFiles/scene_icons.dir/build.make modules/gui/share/CMakeFiles/scene_icons.dir/depend make -f modules/gui/share/CMakeFiles/gui_images.dir/build.make modules/gui/share/CMakeFiles/gui_images.dir/depend make -f modules/gui/pymod/CMakeFiles/ost_gui_scene_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_scene_pymod.dir/depend make -f modules/gui/pymod/CMakeFiles/ost_gui_dng_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_dng_pymod.dir/depend make -f modules/gui/pymod/CMakeFiles/ost_gui_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_pymod.dir/depend make -f modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/build.make modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/share /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share/CMakeFiles/gui_images.dir/DependInfo.cmake "--color=" make -f modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/build.make modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/ost_gui_scene_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/ost_gui_dng_pymod.dir/DependInfo.cmake "--color=" make -f modules/info/pymod/CMakeFiles/ost_info_pymod.dir/build.make modules/info/pymod/CMakeFiles/ost_info_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/ost_gui_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/DependInfo.cmake "--color=" make -f modules/io/pymod/CMakeFiles/ost_io_pymod.dir/build.make modules/io/pymod/CMakeFiles/ost_io_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/DependInfo.cmake "--color=" make -f modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/build.make modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod/CMakeFiles/ost_info_pymod.dir/DependInfo.cmake "--color=" make -f modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build.make modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod/CMakeFiles/ost_io_pymod.dir/DependInfo.cmake "--color=" make -f modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build.make modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/depend make -f modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build.make modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/pymod/CMakeFiles/ost_gui_dng_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_dng_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/build.make modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/img/./__init__.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/pymod/CMakeFiles/ost_gui_scene_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_scene_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/share/CMakeFiles/gui_images.dir/build.make modules/gui/share/CMakeFiles/gui_images.dir/build make -f modules/gui/pymod/CMakeFiles/ost_gui_pymod.dir/build.make modules/gui/pymod/CMakeFiles/ost_gui_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/__init__.py make -f modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/build.make modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/build make -f modules/io/pymod/CMakeFiles/ost_io_pymod.dir/build.make modules/io/pymod/CMakeFiles/ost_io_pymod.dir/build make -f modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/build.make modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/images/logo-small.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/images/logo-small.png make -f modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build.make modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build make -f modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build.make modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/img/alg/./__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./__init__.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./__init__.py make -f modules/info/pymod/CMakeFiles/ost_info_pymod.dir/build.make modules/info/pymod/CMakeFiles/ost_info_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/./__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./__init__.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/mm/./__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/info/./__init__.py make -f modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build.make modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/./__init__.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod/CMakeFiles/ost_gfx_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/subst___init__.py.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod/CMakeFiles/ost_geom_pymod.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/share /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share/CMakeFiles/scene_icons.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod/CMakeFiles/ost_db_pymod.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/./remote.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./remote.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/./antechamber.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/mm/./antechamber.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./init_context_menu.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_context_menu.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/termuse.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/termuse.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./views.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./views.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/color_options_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/color_options_widget.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/build.make modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/build [ 0%] Built target create_stage make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/pymod/CMakeFiles/subst___init__.py.dir/build.make modules/base/pymod/CMakeFiles/subst___init__.py.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./__init__.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/__init__.py.in -DOUT_FILE=__init__.py -DALL_ADDITIONAL_MODULES=,\'gui\',\'gfx\',\'img\',\'info\' -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 0%] Built target ost_img_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./init_menubar.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_menubar.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/./repository.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./repository.py make -f modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/build.make modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/conop/./__init__.py [ 0%] Built target gui_images cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./superpose.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./superpose.py make -f modules/db/pymod/CMakeFiles/ost_db_pymod.dir/build.make modules/db/pymod/CMakeFiles/ost_db_pymod.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/color_select_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/color_select_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/superpositiondialog.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/superpositiondialog.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/db/./__init__.py make -f modules/geom/pymod/CMakeFiles/ost_geom_pymod.dir/build.make modules/geom/pymod/CMakeFiles/ost_geom_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/pymod/CMakeFiles/ost_gfx_pymod.dir/build.make modules/gfx/pymod/CMakeFiles/ost_gfx_pymod.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/geom/./__init__.py make -f modules/gui/share/CMakeFiles/scene_icons.dir/build.make modules/gui/share/CMakeFiles/scene_icons.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gfx/./__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/add_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/add_icon.png [ 0%] Built target ost_seq_pymod [ 0%] Built target ost_mol_pymod [ 0%] Built target ost_info_pymod [ 0%] Built target ost_img_alg_pymod [ 0%] Built target ost_mol_mm_pymod make -f modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build.make modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/DependInfo.cmake "--color=" make -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/depend make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_startup.py.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./init_spacenav.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_spacenav.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/init.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/init.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/combo_options_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/combo_options_widget.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/depend make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/close_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/close_icon.png make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./lga.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./lga.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./qsscoring.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./qsscoring.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_config.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/./cleanup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/conop/./cleanup.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/./py_gfx_obj.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gfx/./py_gfx_obj.py [ 0%] Built target ost_io_pymod [ 0%] Built target subst___init__.py [ 0%] Built target ost_geom_pymod [ 0%] Built target ost_db_pymod make -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/depend make -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/depend make -f actions/CMakeFiles/actions.dir/build.make actions/CMakeFiles/actions.dir/depend make -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/depend make -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/depend make -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/depend make -f modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build.make modules/base/pymod/CMakeFiles/ost_base_pymod.dir/depend make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/actions /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/actions /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/actions/CMakeFiles/actions.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build.make modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom_headers.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./hbplus.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hbplus.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base_headers.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/ost_base_pymod.dir/DependInfo.cmake "--color=" make -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/critical_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/critical_icon.png make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./trajectory_analysis.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./trajectory_analysis.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./__init__.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost_startup.py.in -DOUT_FILE=ost_startup.py -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost_config.in -DOUT_FILE=ost_config -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info_headers.dir/DependInfo.cmake "--color=" [ 0%] Built target ost_gfx_pymod make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build.make modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f actions/CMakeFiles/actions.dir/build.make actions/CMakeFiles/actions.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./msms.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./msms.py make -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/build make -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./settings.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./settings.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/actions/ost-compare-ligand-structures /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-ligand-structures cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/./mat.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./mat.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/export_helper/vector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/export_helper/vector.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/delete_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/delete_icon.png make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./base.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/generic_property_def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/generic_property_def.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/depend make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/DependInfo.cmake "--color=" make -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info.hh [ 0%] Built target subst_ost_config cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/pair_to_tuple_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/pair_to_tuple_conv.hh make -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/distance_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/distance_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/actions/ost-compare-structures /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-structures cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/./renumber.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./renumber.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./tmtools.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./tmtools.py [ 0%] Built target subst_ost_startup.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/DependInfo.cmake "--color=" make -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop_headers.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_error.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/pointer_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/pointer_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./dssp.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./dssp.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/find_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/find_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/actions/ost-compare-structures-legacy /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-structures-legacy cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/vec_to_list_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/vec_to_list_conv.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./dllexport.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./dllexport.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/./aaindex.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./aaindex.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/./wrap_tmalign.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/bindings/./wrap_tmalign.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_group.hh make -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./conop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./conop.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/test_utils/compare_files.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/test_utils/compare_files.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_dng.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./version.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./version.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/information_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/information_icon.png make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./clustalw.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./clustalw.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./def.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./structure_analysis.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./structure_analysis.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/menu.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/menu.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/aaindex1 /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex1 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./init_splash.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_splash.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./stutil.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./stutil.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/cpk_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/cpk_widget.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_prop.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./processor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./processor.hh [ 0%] Built target actions [ 0%] Built target ost_bindings_headers [ 0%] Built target ost_conop_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/custom_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/custom_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./helix_kinks.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./helix_kinks.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./generic_property.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./generic_property.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./amino_acids.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./amino_acids.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./trajectory_viewer.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./trajectory_viewer.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./utils.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./utils.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./exc.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./exc.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_editor_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_editor_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./helpwidget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./helpwidget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_info_handler.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_info_handler.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./table.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./table.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/chain_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./integrity_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./integrity_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./table.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./table.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/map_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/map_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./naccess.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./naccess.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./hbond.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./hbond.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./diag.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./diag.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/aaindex2 /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex2 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_list_model.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_list_model.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost.in -DOUT_FILE=ost -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./geom.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./geom.hh make -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/chain_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/./gosty_startup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./gosty_startup.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/dng.in -DOUT_FILE=dng -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl.hh make -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/depend make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db_headers.dir/DependInfo.cmake "--color=" make -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./table_selector.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./table_selector.py [ 0%] Built target ost_gui_dng_pymod make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./model_check.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./model_check.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./invalid_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./invalid_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/aaindex3 /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex3 make -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_preset_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_preset_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/menubar_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/menubar_icon.png make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./lddt.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./lddt.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/connector_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./hhblits.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits.py [ 0%] Built target ost_config_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./xmlrunner.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./xmlrunner.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./sqlite_wrap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_wrap.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_item.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_item.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 0%] Built target ost_gui_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/hsc_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/hsc_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/connector_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl_fw.hh [ 0%] Built target subst_ost [ 0%] Built target subst_dng make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build make -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/build make -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/depend make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/depend make -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./alignment_opts.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./alignment_opts.hh make -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/raster_image/raster_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/raster_image/raster_image.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io_headers.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./hhblits2.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits2.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/rigid_body_manipulator_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/rigid_body_manipulator_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./ptr_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./ptr_observer.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 0%] Built target ost_seq_alg_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/dispatch.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/dispatch.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./clip_alignment.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./clip_alignment.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./log.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./log.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./hhblits3.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits3.py make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/selection_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/selection_icon.png make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./svd_superpose.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./svd_superpose.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/chemdict_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./conservation.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./conservation.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./log_sink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./log_sink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./blast.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./blast.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/show_sidebar_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/show_sidebar_icon.png make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./module_config.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./forcefield.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./forcefield.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./contact_prediction_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_prediction_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/site_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/site_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./ff_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./ff_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./sec_structure_segments.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_structure_segments.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_writer.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/dihedral.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/dihedral.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui_headers.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./sqlite_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_conv.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl_fw.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat2.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/./testutils.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./testutils.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/immutable_gradient_info_handler.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/immutable_gradient_info_handler.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./qsscore.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./qsscore.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./cadscore.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./cadscore.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./dyn_cast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./dyn_cast.hh make -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./heuristic.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./heuristic.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./anisotropic.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./anisotropic.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/split_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/split_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./buildingblock.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./buildingblock.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./local_dist_diff_test.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./local_dist_diff_test.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_reader.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./module_config.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/entity_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl.hh make -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./scoring.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./scoring.py make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./kclust.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./kclust.py make -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/immutable_preset_info_handler.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/immutable_preset_info_handler.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./stdint.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./stdint.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/entity_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./auto_correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./auto_correlate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different __init__.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/__init__.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/init_inspector.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/init_inspector.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/fragment_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./clear.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clear.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_bar.hh [ 0%] Built target ost_base_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/inspector_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/inspector_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_spec.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_spec.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/fragment_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./clip_min_max.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clip_min_max.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/selection_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/selection_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./conjugate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./conjugate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./alignment_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./alignment_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/map_level_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/map_level_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_ast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_octree.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_octree.hh make -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./linear_indexer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./linear_indexer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/warning_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/warning_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./ialign.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./ialign.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/measure_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/measure_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./chain_mapping.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./chain_mapping.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./stdint_msc.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./stdint_msc.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_info.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./distance_test_common.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_test_common.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./distance_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./distance_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./convolute.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./convolute.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/octree_isocont.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/octree_isocont.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_def.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_ast_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast_fw.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./binary_container.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./binary_container.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/share/icons/refresh.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/refresh.png make -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./mmseqs2.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./mmseqs2.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./range.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./range.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./stereochemistry.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./stereochemistry.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_path.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_path.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'modules/config/CMakeFiles/ost_config.dir/build'. make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./distance_rmsd_test.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_rmsd_test.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat4.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat4.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./gromacs_block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./gromacs_block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./entropy.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./entropy.hh [ 0%] Built target ost_config cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./module_config.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/remote.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/remote.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./extract_data_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./extract_data_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./heuristic_block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./heuristic_block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cartoon_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/./dockq.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./dockq.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./dockq.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./dockq.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_set.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_set.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./superpose_frames.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./superpose_frames.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec2.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./units.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./units.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./interaction.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./interaction.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_frequency_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_frequency_domain.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./filter_clashes.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./filter_clashes.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_editor_list_model.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_editor_list_model.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/custom_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./settings.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./settings.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_half_frequency_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_half_frequency_domain.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_editor_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_editor_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cpk_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./message.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./message.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec4.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec4.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./simulation.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./simulation.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_info_handler.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_info_handler.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/debug_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/debug_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./construct_cbeta.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./construct_cbeta.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_verbose_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_verbose_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./correlate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound_lib.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./global_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./global_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./contact_score.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./contact_score.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./platform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./platform.hh [ 0%] Built target ost_bindings_pymod [ 0%] Built target ost_db_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./modeller.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./modeller.hh [ 0%] Built target scene_icons cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_list_model.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_list_model.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_spatial_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_spatial_domain.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_region.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_region.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/simple_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./item_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./cross_correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./cross_correlate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./clash_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./clash_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./ins_del.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./ins_del.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./trajectory_analysis.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./trajectory_analysis.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./geom_info_conversion.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./geom_info_conversion.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/manipulator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/manipulator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_column.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/io_profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/io_profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./density_slice.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./density_slice.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_column_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./local_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./local_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./rule_based.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./rule_based.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./dft.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./dft.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./item_type_cast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type_cast.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_mode_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_mode_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/dcd_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/mouse_event.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/mouse_event.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./merge_pairwise_alignments.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./merge_pairwise_alignments.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./invalid_sequence.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./invalid_sequence.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fft.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fft.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./minimal_compound_lib.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./minimal_compound_lib.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_op.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_op.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_crd_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/map_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/map_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./views_from_sequences.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./views_from_sequences.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fftw_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fftw_helper.hh [ 0%] Built target ost_info_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_options_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_options_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound_lib_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pqr_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fill.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fill.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/align_properties_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/align_properties_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./pair_subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/scene_observer_impl.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/scene_observer_impl.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./ring_finder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./ring_finder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mae_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/sline_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/sline_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./profile_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./profile_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./structure_analysis.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./structure_analysis.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat2_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat2_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./ligand_scoring.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./string_ref.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./string_ref.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/residue_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./filter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./filter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_row.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/scene_selection_helper.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/scene_selection_helper.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./semiglobal_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./semiglobal_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mmcif_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./ligand_scoring_base.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_base.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./pod_vector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./pod_vector.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_algorithm.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat3_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat3_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/residue_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./state_extractor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./state_extractor.hh [ 0%] Built target ost_conop_headers [ 0%] Built target ost_seq_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./fixed_string.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./fixed_string.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/line_trace_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/line_trace_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/simple_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/simple_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_visitor_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fourier_filters.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fourier_filters.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/surface_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./sequence_identity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_identity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./pdbize.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./pdbize.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/background_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/background_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./system_creator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./system_creator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian_gradient_magnitude.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_gradient_magnitude.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/conservation_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/conservation_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/backbone_trace.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/backbone_trace.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/surface_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/sline_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/sline_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./sequence_similarity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_similarity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./adjacency_bitmap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./adjacency_bitmap.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./tri_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./tri_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./topology_creator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology_creator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat4_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat4_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./boost_filesystem_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./boost_filesystem_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/index.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/index.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./ligand_scoring_scrmsd.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_scrmsd.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_detail.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/torsion_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./index.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./index.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/toolbar_options_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/toolbar_options_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./circular_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./circular_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/trace_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/trace_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian_laplacian.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_laplacian.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./variance_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./variance_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./ligand_scoring_lddtpli.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_lddtpli.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./highest_peak_search_3d.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./highest_peak_search_3d.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./constants.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./constants.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/tube_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/tube_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pdb_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/./bb_lddt.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./bb_lddt.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./data/default_contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_contact_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/value_holder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/value_holder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./histogram.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./histogram.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/stereo_data.json /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/stereo_data.json cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./paged_array.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./paged_array.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/uniform_color_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/uniform_color_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/secstr_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/secstr_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/torsion_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./data/default_pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./algorithm.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_secstr_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_secstr_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_sdf_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_base.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/visibility_op.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/visibility_op.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./topology.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./contact_overlap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./contact_overlap.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./line_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./circle_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./circle_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./hmm_pseudo_counts.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_pseudo_counts.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2.hh [ 0%] Built target ost_mol_alg_pymod [ 0%] Built target ost_base_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_selection_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_selection_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./domain_find.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./domain_find.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/line_trace_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/line_trace_widget.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./steep.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./steep.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./local_sigma_threshold.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./local_sigma_threshold.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./composite_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./composite_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./hmm_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/wireframe_widget.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/wireframe_widget.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_text_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_text_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./similarity_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./similarity_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./mask_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./mask_image.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./wrap_parasail.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./wrap_parasail.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/connect_renderer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/connect_renderer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_algorithm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite_op.hh [ 0%] Built target ost_mol_mm_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_delegate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_delegate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_observer.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/query_editor.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/query_editor.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/mapped_property.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/mapped_property.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./accessibility.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./accessibility.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bond_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./negate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./negate.hh [ 0%] Built target ost_seq_alg_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite2_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_types.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_types.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/save_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/save_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_model.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_renderer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./normalizer_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bond_table.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_table.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./sec_struct.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_struct.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite3_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_entity.hh [ 0%] Built target ost_gui_scene_pymod cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./nonstandard.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./nonstandard.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/tabulated_trig.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/tabulated_trig.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_search_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_search_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./debug.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./debug.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./aligned_cuboid.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./aligned_cuboid.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./molck.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./molck.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec_mat_predicates.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec_mat_predicates.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_table_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_table_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./dllexport.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./dllexport.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./find_membrane.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./find_membrane.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/fast_spheres.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/fast_spheres.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./normalizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_msms_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./quat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./quat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_linear.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_linear.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./entity_to_density.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./entity_to_density.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_log.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_log.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/tick_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/tick_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./biounit.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./biounit.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./gdt.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./gdt.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/custom_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/custom_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/title_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/title_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/alignment_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/alignment_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cpk_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cpk_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/simple_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/simple_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./point_cloud.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./point_cloud.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_str.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_od.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_od.hh [ 0%] Built target ost_mol_alg_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./power_spectrum.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./power_spectrum.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/sline_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/sline_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chem_class.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_class.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_handle_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/main_thread_runner.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/main_thread_runner.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/stereochemical_params_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chem_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./randomize.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./randomize.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/omf.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/omf.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/output_redirector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/output_redirector.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./smooth_mask_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./smooth_mask_image.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_trace_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_trace_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/completer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/completer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/load_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/load_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_source.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cartoon_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cartoon_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_list.hh [ 0%] Built target ost_geom_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/dir_model.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./in_mem_coord_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./in_mem_coord_source.hh make -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat_accumulator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_accumulator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_df3_handler.hh make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/trace_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/trace_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_state_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat_min_max.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_min_max.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/image_format.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/image_format.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/gutter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/gutter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_frame.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_frame.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./threshold.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./threshold.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dx_handler.hh [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite2_op.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat3.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat4_op.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vec3.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat2_op.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat3_op.cc.o [ 0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat2.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./editor_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/path_completer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/path_completer.hh [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite2.cc.o [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat4.cc.o [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite3.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat3_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat3_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat3_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/vecmat3_op.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat2.cc.o -MF CMakeFiles/ost_geom.dir/mat2.cc.o.d -o CMakeFiles/ost_geom.dir/mat2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/mat2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat3.cc.o -MF CMakeFiles/ost_geom.dir/mat3.cc.o.d -o CMakeFiles/ost_geom.dir/mat3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/mat3.cc [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite3_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat4.cc.o -MF CMakeFiles/ost_geom.dir/mat4.cc.o.d -o CMakeFiles/ost_geom.dir/mat4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/mat4.cc [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/transform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vec3.cc.o -MF CMakeFiles/ost_geom.dir/vec3.cc.o.d -o CMakeFiles/ost_geom.dir/vec3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/vec3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat2_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat2_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat2_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/vecmat2_op.cc [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/quat.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat4_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat4_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat4_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/vecmat4_op.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_element_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_element_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite2.cc.o -MF CMakeFiles/ost_geom.dir/composite2.cc.o.d -o CMakeFiles/ost_geom.dir/composite2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/composite2.cc [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite3.cc.o -MF CMakeFiles/ost_geom.dir/composite3.cc.o.d -o CMakeFiles/ost_geom.dir/composite3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/composite3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transcendentals.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transcendentals.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_spi_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite2_op.cc.o -MF CMakeFiles/ost_geom.dir/composite2_op.cc.o.d -o CMakeFiles/ost_geom.dir/composite2_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/composite2_op.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite3_op.cc.o -MF CMakeFiles/ost_geom.dir/composite3_op.cc.o.d -o CMakeFiles/ost_geom.dir/composite3_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/composite3_op.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./editor_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/quat.cc.o -MF CMakeFiles/ost_geom.dir/quat.cc.o.d -o CMakeFiles/ost_geom.dir/quat.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/quat.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/transform.cc.o -MF CMakeFiles/ost_geom.dir/transform.cc.o.d -o CMakeFiles/ost_geom.dir/transform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/transform.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_context_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_context_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o -MF CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o.d -o CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/aligned_cuboid.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_situs_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_chain_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_chain_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/uniform_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/uniform_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transform_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./inverted_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./inverted_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_mrc_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./mol.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./mol.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_completer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_completer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_mirror.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_mirror.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/entity_view_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/entity_view_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_shift.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_shift.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dat_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./discrete_shrink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./discrete_shrink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/basic_gradient_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/basic_gradient_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_ipl_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_level_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_level_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transformation_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformation_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_jpk_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/map_handle_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transformations.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformations.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./render_pass.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_pass.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./bitmap_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./bitmap_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fractional_shift.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fractional_shift.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_tokenizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_tokenizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_nanoscope_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_observer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_syntax_highlighter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_syntax_highlighter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./collada_exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./collada_exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_property_mapper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_property_mapper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_png_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./polar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./polar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dm3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./normalizer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./color.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./color.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/text_logger.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/text_logger.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./line_average.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_average.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./normalizer_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_tiff_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./rscrosscorr.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./rscrosscorr.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./entity_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter_worker.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter_worker.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./null_data.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./null_data.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/tiff_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/tiff_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_visitor_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_text_document_layout.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_text_document_layout.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gl_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/jpk_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/jpk_util.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./observable.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./observable.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/shell_history.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/shell_history.hh [ 1%] Built target ost_img_alg_headers [ 1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/point_cloud.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/point_cloud.cc.o -MF CMakeFiles/ost_geom.dir/point_cloud.cc.o.d -o CMakeFiles/ost_geom.dir/point_cloud.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/src/point_cloud.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state_machine.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state_machine.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/sequence_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./handle_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./handle_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./paste_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./paste_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./peak.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./peak.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/fasta_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./ics_editor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./ics_editor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./phase.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./phase.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pir_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/promod_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./physical_units.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./physical_units.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./not_connected_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./not_connected_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/profile_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition_guard.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition_guard.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./pixel_sampling.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./pixel_sampling.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./property_id.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./property_id.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./point_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./point_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/hhm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/drop_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/drop_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./point.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./point.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pssm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./polygon_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./polygon_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/clustal_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_prim.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_prim.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/bottom_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/bottom_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/load.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/load.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./progress.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./progress.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./symmetry_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./symmetry_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/save.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/save.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/event_button.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/event_button.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./binary_data_sink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_sink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_test_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_test_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./size.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./size.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./binary_data_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_source.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./glwin_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glwin_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_widget_container.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_widget_container.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./spherical_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./spherical_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./container_serialization.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./container_serialization.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./sec_structure.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./sec_structure.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./input.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./input.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar_widget_holder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar_widget_holder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./util.cc /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./util.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./spatial_organizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./spatial_organizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./swap_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./swap_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./prim_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./prim_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_utils.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_utils.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./scene.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/side_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/side_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_exception.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_exception.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_builder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_builder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./selection.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./selection.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./value_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./value_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./builder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./builder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/splitter_panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/splitter_panel_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./vecmat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./vecmat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./texture.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./texture.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./convert.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./convert.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/tabbed_panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/tabbed_panel_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./vertex_array.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_info_convert.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_info_convert.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./converting_streams.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./converting_streams.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./vertex_array_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./torsion_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./torsion_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/context_menu.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/context_menu.hh [ 1%] Built target ost_img_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/current_selection_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/current_selection_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./formatted_line.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./formatted_line.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./transfer_connectivity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./transfer_connectivity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./scene_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gl_include.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_include.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_view_wrapper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_view_wrapper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/custom_part_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/custom_part_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./chemdict_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./glext_include.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glext_include.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/star_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./star_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./render_mode.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_mode.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_part_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_part_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/star_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./star_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./material.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./material.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_info.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/gfx_scene_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/gfx_scene_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./xcs_editor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./xcs_editor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gradient.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/label_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/label_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bounding_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bounding_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gradient_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/root_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/root_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/io_profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./dcd_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_mode_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_mode_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./primitives.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./primitives.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_crd_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./povray_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray_fw.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_modes_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_modes_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pqr_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./povray.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh [ 1%] Built target ost_mol_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mae_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mmcif_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./exporter_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gost_exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gost_exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_handle_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_box_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_box_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pdb_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_iso.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/log_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/log_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_slab.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_slab.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_sdf_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/argand.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/argand.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_iso_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/save_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./save_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel.hh [ 1%] Built target ost_gfx_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/load_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/draw_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/draw_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/drawing_functions.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/drawing_functions.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/load_surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/fft_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/fft_panel.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_msms_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/info_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/info_panel.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/img2qt.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/img2qt.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/mask_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/mask_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./stereochemical_params_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/null_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/null_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/omf.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./omf.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sequence_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./fasta_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pir_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./promod_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_gui.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_gui.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./profile_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./hhm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pssm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./clustal_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/strategies.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/load.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/strategies_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/save.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./save.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/viewer_normalizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/viewer_normalizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/load_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_browser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_browser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_df3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_type_dialog.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_type_dialog.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_viewer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/image_format.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./image_format.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dx_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gl_canvas.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_canvas.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gl_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_spi_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./scene_menu.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_menu.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_situs_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gosty_app.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gosty_app.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./admin.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./admin.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_mrc_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dat_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_ipl_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main_area.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_area.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_jpk_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_nanoscope_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./perspective.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./perspective.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_png_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./scene_selection.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_selection.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main_window.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_window.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dm3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_tiff_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/tiff_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./tiff_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./thin_splitter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./thin_splitter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/jpk_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./jpk_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_geom_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_geom_handler.hh [ 1%] Built target ost_io_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_pool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_pool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_registry.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_registry.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_state_saver.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_state_saver.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_loader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_loader.hh make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 1%] Built target ost_gui_headers [ 1%] Linking CXX shared library ../../../stage/lib/libost_geom.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_geom.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_geom.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_geom.so.2.9 -o ../../../stage/lib/libost_geom.so.2.9.2 CMakeFiles/ost_geom.dir/mat2.cc.o CMakeFiles/ost_geom.dir/mat3.cc.o CMakeFiles/ost_geom.dir/mat4.cc.o CMakeFiles/ost_geom.dir/vec3.cc.o CMakeFiles/ost_geom.dir/vecmat2_op.cc.o CMakeFiles/ost_geom.dir/vecmat3_op.cc.o CMakeFiles/ost_geom.dir/vecmat4_op.cc.o CMakeFiles/ost_geom.dir/composite2.cc.o CMakeFiles/ost_geom.dir/composite3.cc.o CMakeFiles/ost_geom.dir/composite2_op.cc.o CMakeFiles/ost_geom.dir/composite3_op.cc.o CMakeFiles/ost_geom.dir/quat.cc.o CMakeFiles/ost_geom.dir/transform.cc.o CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o CMakeFiles/ost_geom.dir/point_cloud.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_geom.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9 ../../../stage/lib/libost_geom.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 1%] Built target ost_geom make -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/depend make -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod/CMakeFiles/_ost_geom.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 1%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/wrap_geom.cc.o [ 1%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o [ 1%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o [ 1%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec3.cc.o [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec4.cc.o [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec2.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec3.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec3.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vec3.cc [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat2.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec2.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec2.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vec2.cc [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat4.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vecmat2_op.cc [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat3.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vecmat3_op.cc [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/generic_property.cc.o [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/profile.cc.o [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/log_sink.cc.o [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/log.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec4.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec4.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vec4.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/generic_property.cc.o -MF CMakeFiles/ost_base.dir/generic_property.cc.o.d -o CMakeFiles/ost_base.dir/generic_property.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/generic_property.cc [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite2.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_vecmat4_op.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/log.cc.o -MF CMakeFiles/ost_base.dir/log.cc.o.d -o CMakeFiles/ost_base.dir/log.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/log.cc [ 2%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite3.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/log_sink.cc.o -MF CMakeFiles/ost_base.dir/log_sink.cc.o.d -o CMakeFiles/ost_base.dir/log_sink.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/log_sink.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/profile.cc.o -MF CMakeFiles/ost_base.dir/profile.cc.o.d -o CMakeFiles/ost_base.dir/profile.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/profile.cc [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/units.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/wrap_geom.cc.o -MF CMakeFiles/_ost_geom.dir/wrap_geom.cc.o.d -o CMakeFiles/_ost_geom.dir/wrap_geom.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/wrap_geom.cc [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/platform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat2.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat2.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_mat2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat3.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat3.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_mat3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/units.cc.o -MF CMakeFiles/ost_base.dir/units.cc.o.d -o CMakeFiles/ost_base.dir/units.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/units.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat4.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat4.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_mat4.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/platform.cc.o -MF CMakeFiles/ost_base.dir/platform.cc.o.d -o CMakeFiles/ost_base.dir/platform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/platform.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite2.cc.o -MF CMakeFiles/_ost_geom.dir/export_composite2.cc.o.d -o CMakeFiles/_ost_geom.dir/export_composite2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_composite2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite3.cc.o -MF CMakeFiles/_ost_geom.dir/export_composite3.cc.o.d -o CMakeFiles/_ost_geom.dir/export_composite3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_composite3.cc [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/string_ref.cc.o [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/message.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/string_ref.cc.o -MF CMakeFiles/ost_base.dir/string_ref.cc.o.d -o CMakeFiles/ost_base.dir/string_ref.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/string_ref.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/message.cc.o -MF CMakeFiles/ost_base.dir/message.cc.o.d -o CMakeFiles/ost_base.dir/message.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/message.cc [ 2%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o -MF CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o.d -o CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/test_utils/compare_files.cc [ 3%] Building CXX object modules/base/src/CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o -MF CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o.d -o CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/src/boost_filesystem_helper.cc [ 5%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_composite2_op.cc [ 5%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_composite3_op.cc [ 5%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_quat.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_quat.cc.o -MF CMakeFiles/_ost_geom.dir/export_quat.cc.o.d -o CMakeFiles/_ost_geom.dir/export_quat.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_quat.cc [ 5%] Building CXX object modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_transform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_transform.cc.o -MF CMakeFiles/_ost_geom.dir/export_transform.cc.o.d -o CMakeFiles/_ost_geom.dir/export_transform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/export_transform.cc [ 5%] Linking CXX shared library ../../../stage/lib/libost_base.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_base.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_base.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_base.so.2.9 -o ../../../stage/lib/libost_base.so.2.9.2 CMakeFiles/ost_base.dir/generic_property.cc.o CMakeFiles/ost_base.dir/log.cc.o CMakeFiles/ost_base.dir/log_sink.cc.o CMakeFiles/ost_base.dir/profile.cc.o CMakeFiles/ost_base.dir/units.cc.o CMakeFiles/ost_base.dir/string_ref.cc.o CMakeFiles/ost_base.dir/platform.cc.o CMakeFiles/ost_base.dir/message.cc.o CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_base.so.2.9 ../../../stage/lib/libost_base.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 5%] Built target ost_base make -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_impl.cc.o -MF CMakeFiles/ost_info.dir/info_impl.cc.o.d -o CMakeFiles/ost_info.dir/info_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_impl.cc [ 5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_group.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_group.cc.o -MF CMakeFiles/ost_info.dir/info_group.cc.o.d -o CMakeFiles/ost_info.dir/info_group.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_group.cc [ 5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_item.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_item.cc.o -MF CMakeFiles/ost_info.dir/info_item.cc.o.d -o CMakeFiles/ost_info.dir/info_item.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_item.cc [ 5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_handle.cc.o -MF CMakeFiles/ost_info.dir/info_handle.cc.o.d -o CMakeFiles/ost_info.dir/info_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_handle.cc [ 5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_path.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_path.cc.o -MF CMakeFiles/ost_info.dir/info_path.cc.o.d -o CMakeFiles/ost_info.dir/info_path.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_path.cc [ 6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_set.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_set.cc.o -MF CMakeFiles/ost_info.dir/info_set.cc.o.d -o CMakeFiles/ost_info.dir/info_set.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_set.cc [ 6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_visitor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_visitor.cc.o -MF CMakeFiles/ost_info.dir/info_visitor.cc.o.d -o CMakeFiles/ost_info.dir/info_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_visitor.cc [ 6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/geom_info_conversion.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/geom_info_conversion.cc.o -MF CMakeFiles/ost_info.dir/geom_info_conversion.cc.o.d -o CMakeFiles/ost_info.dir/geom_info_conversion.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/geom_info_conversion.cc [ 6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o -MF CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o.d -o CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/src/info_verbose_visitor.cc [ 6%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/geom/_ost_geom.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_geom.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_geom.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/geom/_ost_geom.so CMakeFiles/_ost_geom.dir/export_vec2.cc.o CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o CMakeFiles/_ost_geom.dir/export_vec3.cc.o CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o CMakeFiles/_ost_geom.dir/export_vec4.cc.o CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o CMakeFiles/_ost_geom.dir/wrap_geom.cc.o CMakeFiles/_ost_geom.dir/export_mat2.cc.o CMakeFiles/_ost_geom.dir/export_mat3.cc.o CMakeFiles/_ost_geom.dir/export_mat4.cc.o CMakeFiles/_ost_geom.dir/export_composite2.cc.o CMakeFiles/_ost_geom.dir/export_composite3.cc.o CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o CMakeFiles/_ost_geom.dir/export_quat.cc.o CMakeFiles/_ost_geom.dir/export_transform.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/geom/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/geom/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 6%] Built target _ost_geom make -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/_ost_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/wrap_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/wrap_base.cc.o -MF CMakeFiles/_ost_base.dir/wrap_base.cc.o.d -o CMakeFiles/_ost_base.dir/wrap_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/wrap_base.cc [ 6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_logger.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_logger.cc.o -MF CMakeFiles/_ost_base.dir/export_logger.cc.o.d -o CMakeFiles/_ost_base.dir/export_logger.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/export_logger.cc [ 6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_units.cc.o [ 6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_range.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_units.cc.o -MF CMakeFiles/_ost_base.dir/export_units.cc.o.d -o CMakeFiles/_ost_base.dir/export_units.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/export_units.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_range.cc.o -MF CMakeFiles/_ost_base.dir/export_range.cc.o.d -o CMakeFiles/_ost_base.dir/export_range.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/pymod/export_range.cc [ 6%] Linking CXX shared library ../../../stage/lib/libost_info.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_info.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_info.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_info.so.2.9 -o ../../../stage/lib/libost_info.so.2.9.2 CMakeFiles/ost_info.dir/info_impl.cc.o CMakeFiles/ost_info.dir/info_handle.cc.o CMakeFiles/ost_info.dir/info_group.cc.o CMakeFiles/ost_info.dir/info_item.cc.o CMakeFiles/ost_info.dir/info_path.cc.o CMakeFiles/ost_info.dir/info_set.cc.o CMakeFiles/ost_info.dir/info_visitor.cc.o CMakeFiles/ost_info.dir/geom_info_conversion.cc.o CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_info.so.2.9 ../../../stage/lib/libost_info.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 6%] Built target ost_info make -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/depend make -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_base.cc.o -MF CMakeFiles/ost_mol.dir/atom_base.cc.o.d -o CMakeFiles/ost_mol.dir/atom_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/atom_base.cc [ 7%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/circle_mask.cc.o [ 7%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/composite_mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/circle_mask.cc.o -MF CMakeFiles/ost_img.dir/circle_mask.cc.o.d -o CMakeFiles/ost_img.dir/circle_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/circle_mask.cc [ 7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_base.cc.o [ 7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/composite_mask.cc.o -MF CMakeFiles/ost_img.dir/composite_mask.cc.o.d -o CMakeFiles/ost_img.dir/composite_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/composite_mask.cc [ 7%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_base.cc.o -MF CMakeFiles/ost_mol.dir/chain_base.cc.o.d -o CMakeFiles/ost_mol.dir/chain_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/chain_base.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_view.cc.o -MF CMakeFiles/ost_mol.dir/atom_view.cc.o.d -o CMakeFiles/ost_mol.dir/atom_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/atom_view.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data.cc.o -MF CMakeFiles/ost_img.dir/data.cc.o.d -o CMakeFiles/ost_img.dir/data.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/data.cc [ 7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_handle.cc.o [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data_algorithm.cc.o [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent_mask.cc.o [ 8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_view.cc.o [ 8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_handle.cc.o [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent_iterator.cc.o [ 8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/bond_handle.cc.o [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data_algorithm.cc.o -MF CMakeFiles/ost_img.dir/data_algorithm.cc.o.d -o CMakeFiles/ost_img.dir/data_algorithm.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/data_algorithm.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_handle.cc.o -MF CMakeFiles/ost_mol.dir/atom_handle.cc.o.d -o CMakeFiles/ost_mol.dir/atom_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/atom_handle.cc [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_factory.cc.o [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data_observer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent_iterator.cc.o -MF CMakeFiles/ost_img.dir/extent_iterator.cc.o.d -o CMakeFiles/ost_img.dir/extent_iterator.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/extent_iterator.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/bond_handle.cc.o -MF CMakeFiles/ost_mol.dir/bond_handle.cc.o.d -o CMakeFiles/ost_mol.dir/bond_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/bond_handle.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data_observer.cc.o -MF CMakeFiles/ost_img.dir/data_observer.cc.o.d -o CMakeFiles/ost_img.dir/data_observer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/data_observer.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_handle.cc.o -MF CMakeFiles/ost_mol.dir/chain_handle.cc.o.d -o CMakeFiles/ost_mol.dir/chain_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/chain_handle.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent_mask.cc.o -MF CMakeFiles/ost_img.dir/extent_mask.cc.o.d -o CMakeFiles/ost_img.dir/extent_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/extent_mask.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_view.cc.o -MF CMakeFiles/ost_mol.dir/chain_view.cc.o.d -o CMakeFiles/ost_mol.dir/chain_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/chain_view.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent.cc.o -MF CMakeFiles/ost_img.dir/extent.cc.o.d -o CMakeFiles/ost_img.dir/extent.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/extent.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_factory.cc.o -MF CMakeFiles/ost_img.dir/image_factory.cc.o.d -o CMakeFiles/ost_img.dir/image_factory.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_factory.cc [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_handle.cc.o -MF CMakeFiles/ost_img.dir/image_handle.cc.o.d -o CMakeFiles/ost_img.dir/image_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_handle.cc [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_impl.cc.o -MF CMakeFiles/ost_img.dir/image_impl.cc.o.d -o CMakeFiles/ost_img.dir/image_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_impl.cc [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_list.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_list.cc.o -MF CMakeFiles/ost_img.dir/image_list.cc.o.d -o CMakeFiles/ost_img.dir/image_list.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_list.cc [ 8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_type.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_type.cc.o -MF CMakeFiles/ost_mol.dir/chain_type.cc.o.d -o CMakeFiles/ost_mol.dir/chain_type.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/chain_type.cc [ 8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/inverted_mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/inverted_mask.cc.o -MF CMakeFiles/ost_img.dir/inverted_mask.cc.o.d -o CMakeFiles/ost_img.dir/inverted_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/inverted_mask.cc [ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/map.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/map.cc.o -MF CMakeFiles/ost_img.dir/map.cc.o.d -o CMakeFiles/ost_img.dir/map.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/map.cc [ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_base.cc.o -MF CMakeFiles/ost_img.dir/mask_base.cc.o.d -o CMakeFiles/ost_img.dir/mask_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/mask_base.cc [ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_frame.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_frame.cc.o -MF CMakeFiles/ost_mol.dir/coord_frame.cc.o.d -o CMakeFiles/ost_mol.dir/coord_frame.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/coord_frame.cc [ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_op.cc.o -MF CMakeFiles/ost_img.dir/mask_op.cc.o.d -o CMakeFiles/ost_img.dir/mask_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/mask_op.cc [ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_group.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_group.cc.o -MF CMakeFiles/ost_mol.dir/coord_group.cc.o.d -o CMakeFiles/ost_mol.dir/coord_group.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/coord_group.cc [ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/editor_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/editor_base.cc.o -MF CMakeFiles/ost_mol.dir/editor_base.cc.o.d -o CMakeFiles/ost_mol.dir/editor_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/editor_base.cc [ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask.cc.o -MF CMakeFiles/ost_img.dir/mask.cc.o.d -o CMakeFiles/ost_img.dir/mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/mask.cc [ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_base.cc.o -MF CMakeFiles/ost_mol.dir/entity_base.cc.o.d -o CMakeFiles/ost_mol.dir/entity_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_base.cc [ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_handle.cc.o -MF CMakeFiles/ost_mol.dir/entity_handle.cc.o.d -o CMakeFiles/ost_mol.dir/entity_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_handle.cc [ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_observer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_observer.cc.o -MF CMakeFiles/ost_mol.dir/entity_observer.cc.o.d -o CMakeFiles/ost_mol.dir/entity_observer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_observer.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/observable.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/observable.cc.o -MF CMakeFiles/ost_img.dir/observable.cc.o.d -o CMakeFiles/ost_img.dir/observable.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/observable.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/paste_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/paste_impl.cc.o -MF CMakeFiles/ost_img.dir/paste_impl.cc.o.d -o CMakeFiles/ost_img.dir/paste_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/paste_impl.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/peak.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/peak.cc.o -MF CMakeFiles/ost_img.dir/peak.cc.o.d -o CMakeFiles/ost_img.dir/peak.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/peak.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/phase.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/phase.cc.o -MF CMakeFiles/ost_img.dir/phase.cc.o.d -o CMakeFiles/ost_img.dir/phase.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/phase.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/physical_units.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/physical_units.cc.o -MF CMakeFiles/ost_img.dir/physical_units.cc.o.d -o CMakeFiles/ost_img.dir/physical_units.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/physical_units.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/pixel_sampling.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/pixel_sampling.cc.o -MF CMakeFiles/ost_img.dir/pixel_sampling.cc.o.d -o CMakeFiles/ost_img.dir/pixel_sampling.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/pixel_sampling.cc [ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o -MF CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o.d -o CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_property_mapper.cc [ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/point_list.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/point_list.cc.o -MF CMakeFiles/ost_img.dir/point_list.cc.o.d -o CMakeFiles/ost_img.dir/point_list.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/point_list.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/point.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/point.cc.o -MF CMakeFiles/ost_img.dir/point.cc.o.d -o CMakeFiles/ost_img.dir/point.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/point.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/polygon_mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/polygon_mask.cc.o -MF CMakeFiles/ost_img.dir/polygon_mask.cc.o.d -o CMakeFiles/ost_img.dir/polygon_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/polygon_mask.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_view.cc.o -MF CMakeFiles/ost_mol.dir/entity_view.cc.o.d -o CMakeFiles/ost_mol.dir/entity_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_view.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/progress.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/progress.cc.o -MF CMakeFiles/ost_img.dir/progress.cc.o.d -o CMakeFiles/ost_img.dir/progress.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/progress.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_visitor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_visitor.cc.o -MF CMakeFiles/ost_mol.dir/entity_visitor.cc.o.d -o CMakeFiles/ost_mol.dir/entity_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/entity_visitor.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/ics_editor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/ics_editor.cc.o -MF CMakeFiles/ost_mol.dir/ics_editor.cc.o.d -o CMakeFiles/ost_mol.dir/ics_editor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/ics_editor.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/not_connected_error.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/not_connected_error.cc.o -MF CMakeFiles/ost_mol.dir/not_connected_error.cc.o.d -o CMakeFiles/ost_mol.dir/not_connected_error.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/not_connected_error.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/size.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/size.cc.o -MF CMakeFiles/ost_img.dir/size.cc.o.d -o CMakeFiles/ost_img.dir/size.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/size.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/spherical_mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/spherical_mask.cc.o -MF CMakeFiles/ost_img.dir/spherical_mask.cc.o.d -o CMakeFiles/ost_img.dir/spherical_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/spherical_mask.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_info_convert.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_info_convert.cc.o -MF CMakeFiles/ost_img.dir/mask_info_convert.cc.o.d -o CMakeFiles/ost_img.dir/mask_info_convert.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/mask_info_convert.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o -MF CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o.d -o CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_factory.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/index.cc.o [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/property_id.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/index.cc.o -MF CMakeFiles/ost_img.dir/image_state/index.cc.o.d -o CMakeFiles/ost_img.dir/image_state/index.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/index.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/property_id.cc.o -MF CMakeFiles/ost_mol.dir/property_id.cc.o.d -o CMakeFiles/ost_mol.dir/property_id.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/property_id.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query.cc.o -MF CMakeFiles/ost_mol.dir/query.cc.o.d -o CMakeFiles/ost_mol.dir/query.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/query.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o -MF CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o.d -o CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_base.cc [ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o -MF CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o.d -o CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/raster_image/raster_image.cc [ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_error.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_error.cc.o -MF CMakeFiles/ost_mol.dir/query_error.cc.o.d -o CMakeFiles/ost_mol.dir/query_error.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/query_error.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_state.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_state.cc.o -MF CMakeFiles/ost_mol.dir/query_state.cc.o.d -o CMakeFiles/ost_mol.dir/query_state.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/query_state.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_base.cc.o -MF CMakeFiles/ost_mol.dir/residue_base.cc.o.d -o CMakeFiles/ost_mol.dir/residue_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/residue_base.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_handle.cc.o -MF CMakeFiles/ost_mol.dir/residue_handle.cc.o.d -o CMakeFiles/ost_mol.dir/residue_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/residue_handle.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_view.cc.o -MF CMakeFiles/ost_mol.dir/residue_view.cc.o.d -o CMakeFiles/ost_mol.dir/residue_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/residue_view.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_builder.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_builder.cc.o -MF CMakeFiles/ost_mol.dir/surface_builder.cc.o.d -o CMakeFiles/ost_mol.dir/surface_builder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/surface_builder.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_handle.cc.o -MF CMakeFiles/ost_mol.dir/surface_handle.cc.o.d -o CMakeFiles/ost_mol.dir/surface_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/surface_handle.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o -MF CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o.d -o CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/transfer_connectivity.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/torsion_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/torsion_handle.cc.o -MF CMakeFiles/ost_mol.dir/torsion_handle.cc.o.d -o CMakeFiles/ost_mol.dir/torsion_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/torsion_handle.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o -MF CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o.d -o CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/query_view_wrapper.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/view_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/view_op.cc.o -MF CMakeFiles/ost_mol.dir/view_op.cc.o.d -o CMakeFiles/ost_mol.dir/view_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/view_op.cc [ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_source.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_source.cc.o -MF CMakeFiles/ost_mol.dir/coord_source.cc.o.d -o CMakeFiles/ost_mol.dir/coord_source.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/coord_source.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o -MF CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o.d -o CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/in_mem_coord_source.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/bounding_box.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/bounding_box.cc.o -MF CMakeFiles/ost_mol.dir/bounding_box.cc.o.d -o CMakeFiles/ost_mol.dir/bounding_box.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/bounding_box.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/xcs_editor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/xcs_editor.cc.o -MF CMakeFiles/ost_mol.dir/xcs_editor.cc.o.d -o CMakeFiles/ost_mol.dir/xcs_editor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/xcs_editor.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_impl.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/chain_impl.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/connector_impl.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/dihedral.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/dihedral.cc.o -MF CMakeFiles/ost_mol.dir/impl/dihedral.cc.o.d -o CMakeFiles/ost_mol.dir/impl/dihedral.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/dihedral.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/entity_impl.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_ast.cc.o [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_ast.cc.o -MF CMakeFiles/ost_mol.dir/impl/query_ast.cc.o.d -o CMakeFiles/ost_mol.dir/impl/query_ast.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_ast.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/fragment_impl.cc [ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/query_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/query_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_impl.cc [ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/residue_impl.cc [ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/surface_impl.cc [ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/torsion_impl.cc [ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o -MF CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o.d -o CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_prop.cc [ 16%] Linking CXX shared library ../../../../stage/lib/libost_img.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_img.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_img.so.2.9 -o ../../../../stage/lib/libost_img.so.2.9.2 CMakeFiles/ost_img.dir/circle_mask.cc.o CMakeFiles/ost_img.dir/composite_mask.cc.o CMakeFiles/ost_img.dir/data_algorithm.cc.o CMakeFiles/ost_img.dir/data_observer.cc.o CMakeFiles/ost_img.dir/data.cc.o CMakeFiles/ost_img.dir/extent_iterator.cc.o CMakeFiles/ost_img.dir/extent_mask.cc.o CMakeFiles/ost_img.dir/extent.cc.o CMakeFiles/ost_img.dir/image_factory.cc.o CMakeFiles/ost_img.dir/image_handle.cc.o CMakeFiles/ost_img.dir/image_impl.cc.o CMakeFiles/ost_img.dir/image_list.cc.o CMakeFiles/ost_img.dir/inverted_mask.cc.o CMakeFiles/ost_img.dir/map.cc.o CMakeFiles/ost_img.dir/mask_base.cc.o CMakeFiles/ost_img.dir/mask_op.cc.o CMakeFiles/ost_img.dir/mask.cc.o CMakeFiles/ost_img.dir/observable.cc.o CMakeFiles/ost_img.dir/paste_impl.cc.o CMakeFiles/ost_img.dir/peak.cc.o CMakeFiles/ost_img.dir/phase.cc.o CMakeFiles/ost_img.dir/physical_units.cc.o CMakeFiles/ost_img.dir/pixel_sampling.cc.o CMakeFiles/ost_img.dir/point_list.cc.o CMakeFiles/ost_img.dir/point.cc.o CMakeFiles/ost_img.dir/polygon_mask.cc.o CMakeFiles/ost_img.dir/progress.cc.o CMakeFiles/ost_img.dir/size.cc.o CMakeFiles/ost_img.dir/spherical_mask.cc.o CMakeFiles/ost_img.dir/mask_info_convert.cc.o CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o CMakeFiles/ost_img.dir/image_state/index.cc.o CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9 ../../../../stage/lib/libost_img.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 16%] Built target ost_img make -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/anisotropic.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/anisotropic.cc.o -MF CMakeFiles/ost_img_alg.dir/anisotropic.cc.o.d -o CMakeFiles/ost_img_alg.dir/anisotropic.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/anisotropic.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/auto_correlate.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/correlate.cc.o [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/convolute.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/convolute.cc.o -MF CMakeFiles/ost_img_alg.dir/convolute.cc.o.d -o CMakeFiles/ost_img_alg.dir/convolute.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/convolute.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/correlate.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/correlate.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/density_slice.cc.o [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/density_slice.cc.o -MF CMakeFiles/ost_img_alg.dir/density_slice.cc.o.d -o CMakeFiles/ost_img_alg.dir/density_slice.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/density_slice.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/cross_correlate.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/dft.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/dft.cc.o -MF CMakeFiles/ost_img_alg.dir/dft.cc.o.d -o CMakeFiles/ost_img_alg.dir/dft.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/dft.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fft.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fft.cc.o -MF CMakeFiles/ost_img_alg.dir/fft.cc.o.d -o CMakeFiles/ost_img_alg.dir/fft.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/fft.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o -MF CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o.d -o CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/fourier_filters.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/gaussian.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/gaussian_gradient_magnitude.cc [ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/gaussian_laplacian.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o -MF CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o.d -o CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/highest_peak_search_3d.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/histogram.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/histogram.cc.o -MF CMakeFiles/ost_img_alg.dir/histogram.cc.o.d -o CMakeFiles/ost_img_alg.dir/histogram.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/histogram.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_iterator.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_iterator.cc.o -MF CMakeFiles/ost_img_alg.dir/line_iterator.cc.o.d -o CMakeFiles/ost_img_alg.dir/line_iterator.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/line_iterator.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o -MF CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o.d -o CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/local_sigma_threshold.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/mask_image.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/mask_image.cc.o -MF CMakeFiles/ost_img_alg.dir/mask_image.cc.o.d -o CMakeFiles/ost_img_alg.dir/mask_image.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/mask_image.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer.cc.o -MF CMakeFiles/ost_img_alg.dir/normalizer.cc.o.d -o CMakeFiles/ost_img_alg.dir/normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/normalizer.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o -MF CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o.d -o CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/normalizer_factory.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_linear.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_linear.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_linear.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_linear.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/norm_linear.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_log.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_log.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_log.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_log.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/norm_log.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_od.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_od.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_od.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_od.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/norm_od.cc [ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o -MF CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o.d -o CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/power_spectrum.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/randomize.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/randomize.cc.o -MF CMakeFiles/ost_img_alg.dir/randomize.cc.o.d -o CMakeFiles/ost_img_alg.dir/randomize.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/randomize.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o -MF CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o.d -o CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/smooth_mask_image.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat.cc.o -MF CMakeFiles/ost_img_alg.dir/stat.cc.o.d -o CMakeFiles/ost_img_alg.dir/stat.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/stat.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o -MF CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o.d -o CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/stat_min_max.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_transform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_transform.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_transform.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_transform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/alg_transform.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/alg_mirror.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_shift.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_shift.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_shift.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_shift.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/alg_shift.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/threshold.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/threshold.cc.o -MF CMakeFiles/ost_img_alg.dir/threshold.cc.o.d -o CMakeFiles/ost_img_alg.dir/threshold.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/threshold.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o -MF CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o.d -o CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/discrete_shrink.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformation_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformation_base.cc.o -MF CMakeFiles/ost_img_alg.dir/transformation_base.cc.o.d -o CMakeFiles/ost_img_alg.dir/transformation_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/transformation_base.cc [ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformations.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformations.cc.o -MF CMakeFiles/ost_img_alg.dir/transformations.cc.o.d -o CMakeFiles/ost_img_alg.dir/transformations.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/transformations.cc [ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o -MF CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o.d -o CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/fractional_shift.cc [ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/polar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/polar.cc.o -MF CMakeFiles/ost_img_alg.dir/polar.cc.o.d -o CMakeFiles/ost_img_alg.dir/polar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/polar.cc [ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o -MF CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o.d -o CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/rscrosscorr.cc [ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_average.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_average.cc.o -MF CMakeFiles/ost_img_alg.dir/line_average.cc.o.d -o CMakeFiles/ost_img_alg.dir/line_average.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/line_average.cc [ 21%] Linking CXX shared library ../../../../stage/lib/libost_img_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img_alg.dir/link.txt --verbose=1 [ 21%] Linking CXX shared library ../../../../stage/lib/libost_mol.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol.dir/link.txt --verbose=1 [ 21%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/_ost_base.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_base.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_base.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/_ost_base.so CMakeFiles/_ost_base.dir/wrap_base.cc.o CMakeFiles/_ost_base.dir/export_logger.cc.o CMakeFiles/_ost_base.dir/export_range.cc.o CMakeFiles/_ost_base.dir/export_units.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_base.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/settings.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./settings.pyc\",\"settings.py\",doraise=True)" /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_img_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_img_alg.so.2.9 -o ../../../../stage/lib/libost_img_alg.so.2.9.2 CMakeFiles/ost_img_alg.dir/anisotropic.cc.o CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o CMakeFiles/ost_img_alg.dir/convolute.cc.o CMakeFiles/ost_img_alg.dir/correlate.cc.o CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o CMakeFiles/ost_img_alg.dir/density_slice.cc.o CMakeFiles/ost_img_alg.dir/dft.cc.o CMakeFiles/ost_img_alg.dir/fft.cc.o CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o CMakeFiles/ost_img_alg.dir/gaussian.cc.o CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o CMakeFiles/ost_img_alg.dir/histogram.cc.o CMakeFiles/ost_img_alg.dir/line_iterator.cc.o CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o CMakeFiles/ost_img_alg.dir/mask_image.cc.o CMakeFiles/ost_img_alg.dir/normalizer.cc.o CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o CMakeFiles/ost_img_alg.dir/norm_linear.cc.o CMakeFiles/ost_img_alg.dir/norm_log.cc.o CMakeFiles/ost_img_alg.dir/norm_od.cc.o CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o CMakeFiles/ost_img_alg.dir/randomize.cc.o CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o CMakeFiles/ost_img_alg.dir/stat.cc.o CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o CMakeFiles/ost_img_alg.dir/alg_transform.cc.o CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o CMakeFiles/ost_img_alg.dir/alg_shift.cc.o CMakeFiles/ost_img_alg.dir/threshold.cc.o CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o CMakeFiles/ost_img_alg.dir/transformation_base.cc.o CMakeFiles/ost_img_alg.dir/transformations.cc.o CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o CMakeFiles/ost_img_alg.dir/polar.cc.o CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o CMakeFiles/ost_img_alg.dir/line_average.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img_alg.so.2.9 ../../../../stage/lib/libost_img_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/stutil.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./stutil.pyc\",\"stutil.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 21%] Built target ost_img_alg cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/table.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./table.pyc\",\"table.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/table_selector.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./table_selector.pyc\",\"table_selector.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/xmlrunner.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./xmlrunner.pyc\",\"xmlrunner.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/base/pymod/testutils.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/./testutils.pyc\",\"testutils.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 21%] Built target _ost_base make -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod/CMakeFiles/_ost_info.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 21%] Building CXX object modules/info/pymod/CMakeFiles/_ost_info.dir/wrap_info.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/pymod/CMakeFiles/_ost_info.dir/wrap_info.cc.o -MF CMakeFiles/_ost_info.dir/wrap_info.cc.o.d -o CMakeFiles/_ost_info.dir/wrap_info.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/info/pymod/wrap_info.cc /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_mol.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol.so.2.9 -o ../../../../stage/lib/libost_mol.so.2.9.2 CMakeFiles/ost_mol.dir/atom_base.cc.o CMakeFiles/ost_mol.dir/atom_handle.cc.o CMakeFiles/ost_mol.dir/atom_view.cc.o CMakeFiles/ost_mol.dir/bond_handle.cc.o CMakeFiles/ost_mol.dir/chain_base.cc.o CMakeFiles/ost_mol.dir/chain_handle.cc.o CMakeFiles/ost_mol.dir/chain_view.cc.o CMakeFiles/ost_mol.dir/chain_type.cc.o CMakeFiles/ost_mol.dir/coord_frame.cc.o CMakeFiles/ost_mol.dir/coord_group.cc.o CMakeFiles/ost_mol.dir/editor_base.cc.o CMakeFiles/ost_mol.dir/entity_base.cc.o CMakeFiles/ost_mol.dir/entity_handle.cc.o CMakeFiles/ost_mol.dir/entity_observer.cc.o CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o CMakeFiles/ost_mol.dir/entity_view.cc.o CMakeFiles/ost_mol.dir/entity_visitor.cc.o CMakeFiles/ost_mol.dir/ics_editor.cc.o CMakeFiles/ost_mol.dir/not_connected_error.cc.o CMakeFiles/ost_mol.dir/property_id.cc.o CMakeFiles/ost_mol.dir/query.cc.o CMakeFiles/ost_mol.dir/query_error.cc.o CMakeFiles/ost_mol.dir/query_state.cc.o CMakeFiles/ost_mol.dir/residue_base.cc.o CMakeFiles/ost_mol.dir/residue_handle.cc.o CMakeFiles/ost_mol.dir/residue_view.cc.o CMakeFiles/ost_mol.dir/surface_builder.cc.o CMakeFiles/ost_mol.dir/surface_handle.cc.o CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o CMakeFiles/ost_mol.dir/torsion_handle.cc.o CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o CMakeFiles/ost_mol.dir/view_op.cc.o CMakeFiles/ost_mol.dir/coord_source.cc.o CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o CMakeFiles/ost_mol.dir/bounding_box.cc.o CMakeFiles/ost_mol.dir/xcs_editor.cc.o CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o CMakeFiles/ost_mol.dir/impl/dihedral.cc.o CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o CMakeFiles/ost_mol.dir/impl/query_ast.cc.o CMakeFiles/ost_mol.dir/impl/query_impl.cc.o CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9 ../../../../stage/lib/libost_mol.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 21%] Built target ost_mol make -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o -MF CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o.d -o CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_impl.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o -MF CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o.d -o CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_impl.cc [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_list.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_list.cc.o -MF CMakeFiles/ost_seq.dir/sequence_list.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_list.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/sequence_list.cc [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_region.cc.o [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_column.cc.o [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_region.cc.o -MF CMakeFiles/ost_seq.dir/aligned_region.cc.o.d -o CMakeFiles/ost_seq.dir/aligned_region.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/aligned_region.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_column.cc.o -MF CMakeFiles/ost_seq.dir/aligned_column.cc.o.d -o CMakeFiles/ost_seq.dir/aligned_column.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/aligned_column.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_handle.cc.o -MF CMakeFiles/ost_seq.dir/sequence_handle.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/sequence_handle.cc [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/alignment_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/alignment_handle.cc.o -MF CMakeFiles/ost_seq.dir/alignment_handle.cc.o.d -o CMakeFiles/ost_seq.dir/alignment_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/alignment_handle.cc [ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_op.cc.o -MF CMakeFiles/ost_seq.dir/sequence_op.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/sequence_op.cc [ 22%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/views_from_sequences.cc.o [ 22%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/profile_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/views_from_sequences.cc.o -MF CMakeFiles/ost_seq.dir/views_from_sequences.cc.o.d -o CMakeFiles/ost_seq.dir/views_from_sequences.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/views_from_sequences.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/profile_handle.cc.o -MF CMakeFiles/ost_seq.dir/profile_handle.cc.o.d -o CMakeFiles/ost_seq.dir/profile_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/profile_handle.cc [ 22%] Linking CXX shared library ../../../../stage/lib/libost_seq.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_seq.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_seq.so.2.9 -o ../../../../stage/lib/libost_seq.so.2.9.2 CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o CMakeFiles/ost_seq.dir/sequence_handle.cc.o CMakeFiles/ost_seq.dir/aligned_region.cc.o CMakeFiles/ost_seq.dir/aligned_column.cc.o CMakeFiles/ost_seq.dir/sequence_list.cc.o CMakeFiles/ost_seq.dir/alignment_handle.cc.o CMakeFiles/ost_seq.dir/sequence_op.cc.o CMakeFiles/ost_seq.dir/views_from_sequences.cc.o CMakeFiles/ost_seq.dir/profile_handle.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9 ../../../../stage/lib/libost_seq.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 22%] Built target ost_seq make -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings.dir/DependInfo.cmake "--color=" make -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db.dir/DependInfo.cmake "--color=" make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 22%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/sqlite_wrap.cc.o [ 22%] Building CXX object modules/bindings/src/CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BINDINGS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/src/CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o -MF CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o.d -o CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/sqlite_wrap.cc.o -MF CMakeFiles/ost_db.dir/sqlite_wrap.cc.o.d -o CMakeFiles/ost_db.dir/sqlite_wrap.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/src/sqlite_wrap.cc [ 22%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o [ 22%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/binary_container.cc.o [ 23%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/linear_indexer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/linear_indexer.cc.o -MF CMakeFiles/ost_db.dir/linear_indexer.cc.o.d -o CMakeFiles/ost_db.dir/linear_indexer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/src/linear_indexer.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o -MF CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o.d -o CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/clip_alignment.cc [ 23%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/extract_data_helper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/binary_container.cc.o -MF CMakeFiles/ost_db.dir/binary_container.cc.o.d -o CMakeFiles/ost_db.dir/binary_container.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/src/binary_container.cc [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/extract_data_helper.cc.o -MF CMakeFiles/ost_db.dir/extract_data_helper.cc.o.d -o CMakeFiles/ost_db.dir/extract_data_helper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/src/extract_data_helper.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o -MF CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o.d -o CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/contact_prediction_score.cc [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/conservation.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/conservation.cc.o -MF CMakeFiles/ost_seq_alg.dir/conservation.cc.o.d -o CMakeFiles/ost_seq_alg.dir/conservation.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/conservation.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/contact_weight_matrix.cc [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/entropy.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/entropy.cc.o -MF CMakeFiles/ost_seq_alg.dir/entropy.cc.o.d -o CMakeFiles/ost_seq_alg.dir/entropy.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/entropy.cc [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/distance_map.cc.o [ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/global_align.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/distance_map.cc.o -MF CMakeFiles/ost_seq_alg.dir/distance_map.cc.o.d -o CMakeFiles/ost_seq_alg.dir/distance_map.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/distance_map.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/global_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/global_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/global_align.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/global_align.cc [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/local_align.cc.o [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/ins_del.cc.o [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/local_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/local_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/local_align.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/local_align.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/ins_del.cc.o -MF CMakeFiles/ost_seq_alg.dir/ins_del.cc.o.d -o CMakeFiles/ost_seq_alg.dir/ins_del.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/ins_del.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/pair_subst_weight_matrix.cc [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o -MF CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o.d -o CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/sequence_similarity.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o -MF CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o.d -o CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/merge_pairwise_alignments.cc [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/semiglobal_align.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o -MF CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o.d -o CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/sequence_identity.cc [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/subst_weight_matrix.cc In file included from /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/param_set.h:7, from /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:6, from /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:20: /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h: In function 'void file2chainlist(std::vector >&, const std::string&, const std::string&, const std::string&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h:833:11: warning: unused variable 'b' [-Wunused-variable] 833 | int a,b; | ^ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h: In function 'void file2chainpairlist(std::vector >&, std::vector >&, const std::string&, const std::string&, const std::string&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h:897:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 897 | for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear(); | ^~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h:897:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 897 | for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear(); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h:901:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 901 | for (i=0;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 458 | for (int i=0;i >&, char*, char*, std::vector >, std::vector >, std::vector, std::vector, int, int, int)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h:715:14: warning: statement has no effect [-Wunused-value] 715 | for (i;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 878 | for (i=0;i >&, const std::vector >&, std::string, std::string)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:1604:38: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map, int>::mapped_type' {aka 'int'} [-Wsign-compare] 1604 | if (atom_site_pos==_atom_site["Cartn_x"]) /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:1607:43: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map, int>::mapped_type' {aka 'int'} [-Wsign-compare] 1607 | else if (atom_site_pos==_atom_site["Cartn_y"]) /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:1610:43: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map, int>::mapped_type' {aka 'int'} [-Wsign-compare] 1610 | else if (atom_site_pos==_atom_site["Cartn_z"]) /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:1653:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1653 | for (i=1;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1655 | for (i=1;i >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1716 | for (int p=0;p >&, const std::vector >&, std::string, std::string, int, int, double, int, double, double, double)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:1855:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1855 | for (i=1;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1857 | for (i=1;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2162 | if (!mm_opt) for (i=1;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2372 | for (i=1;i >, double, double, int, int, bool, bool, bool, int, double)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:3289:12: warning: variable 'Lnorm_d0' set but not used [-Wunused-but-set-variable] 3289 | double Lnorm_d0; | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h: In function 'int CPalign_main(double**, double**, const char*, const char*, const char*, const char*, double*, double (*)[3], double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, std::string&, std::string&, std::string&, double&, int&, double&, double&, double&, int&, int&, int, int, std::vector >, double, double, int, int, bool, bool, bool, int, double)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/TMalign.h:3467:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3467 | for (i=0;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3572 | for (i=0;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3606 | for (r=0;r >&, double, double, bool, bool, int, bool, int, int, int*, int)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/se.h:52:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 52 | for (int r=0;r::size_type' {aka 'long unsigned int'} [-Wsign-compare] 222 | for (int r=0;r > >, std::string)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:670:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 670 | for (chain_i=0;chain_i >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 673 | for (a=0;a >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 687 | for (a=0;a >&, int, int, int, std::string, int, double**, const std::string&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:1010:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1010 | for (a=0;a > >&, const std::vector > >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector&, const std::vector&, const std::vector&, const std::vector&, double**, double**, char*, char*, char*, char*, int, int, std::vector > >&, std::vector > >&, int*, int*, std::vector >&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:1166:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1166 | for (i=0;i >&, std::vector > >&, std::vector > >&, int*, int*, double**, std::vector > >&, std::vector > >&, int*, int*, double**)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:1593:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1593 | for (i=0;i >, double, double, int, int, bool, bool, bool, int, double)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:2542:12: warning: variable 'Lnorm_d0' set but not used [-Wunused-but-set-variable] 2542 | double Lnorm_d0; | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h: In function 'void MMalign_dimer(double&, const std::vector > >&, const std::vector > >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector&, const std::vector&, const std::vector&, const std::vector&, double**, double**, char*, char*, char*, char*, int, int, int, int, double**, std::vector > >&, std::vector > >&, int*, int*, std::vector >&, double, bool)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:2694:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2694 | for (c=0;c > >&, std::vector >&, std::vector&, std::vector >&, std::vector&, const std::string&, std::string)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:2993:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2993 | for (c=0;c >&, const std::vector >&, double**, int*)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:3030:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3030 | for (i=0;i::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/conservation.cc:128:27: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/sequence_handle.hh:27, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alignment_handle.hh:28: /usr/include/boost/variant/variant.hpp: In function 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/string:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/conservation.cc:128:27: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/conservation.cc:128:27: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/conservation.cc:128:27: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'std::vector ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o -MF CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o.d -o CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/hmm_score.cc [ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o -MF CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o.d -o CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/wrap_parasail.cc /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc: In function 'void ost::bindings::parse_chain_list_hacked(const std::vector&, const ost::seq::SequenceList&, const std::vector&, const std::vector >&, std::vector > >&, std::vector >&, std::vector >&, std::vector&, std::vector&, std::vector >&, int, int, std::string, int, std::string, int, int, int&, int&, int, std::vector >&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:263:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 263 | const std::string& s = seq[i].GetString(); | ^ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:263:44: note: the temporary was destroyed at the end of the full expression 'ost::seq::SequenceList::operator[](int) const(i).ost::seq::SequenceHandle::GetString()' 263 | const std::string& s = seq[i].GetString(); | ~~~~~~~~~~~~~~~~^~ [ 25%] Linking CXX shared library ../../../stage/lib/libost_db.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_db.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_db.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_db.so.2.9 -o ../../../stage/lib/libost_db.so.2.9.2 CMakeFiles/ost_db.dir/sqlite_wrap.cc.o CMakeFiles/ost_db.dir/linear_indexer.cc.o CMakeFiles/ost_db.dir/binary_container.cc.o CMakeFiles/ost_db.dir/extract_data_helper.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_db.so.2.9.2 ../../../stage/lib/libost_db.so.2.9 ../../../stage/lib/libost_db.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 25%] Built target ost_db make -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/processor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/processor.cc.o -MF CMakeFiles/ost_conop.dir/processor.cc.o.d -o CMakeFiles/ost_conop.dir/processor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/processor.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/amino_acids.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/amino_acids.cc.o -MF CMakeFiles/ost_conop.dir/amino_acids.cc.o.d -o CMakeFiles/ost_conop.dir/amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/amino_acids.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/conop.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/conop.cc.o -MF CMakeFiles/ost_conop.dir/conop.cc.o.d -o CMakeFiles/ost_conop.dir/conop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/conop.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib_base.cc.o -MF CMakeFiles/ost_conop.dir/compound_lib_base.cc.o.d -o CMakeFiles/ost_conop.dir/compound_lib_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/compound_lib_base.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o -MF CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o.d -o CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/minimal_compound_lib.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/rule_based.cc.o [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/diag.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/diag.cc.o -MF CMakeFiles/ost_conop.dir/diag.cc.o.d -o CMakeFiles/ost_conop.dir/diag.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/diag.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/rule_based.cc.o -MF CMakeFiles/ost_conop.dir/rule_based.cc.o.d -o CMakeFiles/ost_conop.dir/rule_based.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/rule_based.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/heuristic.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/heuristic.cc.o -MF CMakeFiles/ost_conop.dir/heuristic.cc.o.d -o CMakeFiles/ost_conop.dir/heuristic.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/heuristic.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/model_check.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/model_check.cc.o -MF CMakeFiles/ost_conop.dir/model_check.cc.o.d -o CMakeFiles/ost_conop.dir/model_check.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/model_check.cc [ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound.cc.o -MF CMakeFiles/ost_conop.dir/compound.cc.o.d -o CMakeFiles/ost_conop.dir/compound.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/compound.cc [ 27%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/ring_finder.cc.o [ 27%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib.cc.o -MF CMakeFiles/ost_conop.dir/compound_lib.cc.o.d -o CMakeFiles/ost_conop.dir/compound_lib.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/compound_lib.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/ring_finder.cc.o -MF CMakeFiles/ost_conop.dir/ring_finder.cc.o.d -o CMakeFiles/ost_conop.dir/ring_finder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/ring_finder.cc /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/hmm_pseudo_counts.cc: In static member function 'static ost::seq::alg::ContextProfileDBPtr ost::seq::alg::ContextProfileDB::FromCRF(const String&)': /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/hmm_pseudo_counts.cc:146:56: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 146 | if(boost::iequals(".gz", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/hmm_pseudo_counts.cc:4: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /usr/include/c++/14/complex:45, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/conop/src/ring_finder.cc:19: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26: /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h: In function 'int extract_aln_from_resi(std::vector >&, char*, char*, std::vector >, std::vector >, std::vector, std::vector, int, int, int)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h:686:21: warning: 'invmap' may be used uninitialized [-Wmaybe-uninitialized] 686 | NWalign_main(seqx, seqy, xlen, ylen, sequence[0],sequence[1], | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 | mol_type, invmap, 0, glocal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h:676:14: note: 'invmap' was declared here 676 | int *invmap; | ^~~~~~ [ 28%] Linking CXX shared library ../../../../stage/lib/libost_seq_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_alg.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_seq_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_seq_alg.so.2.9 -o ../../../../stage/lib/libost_seq_alg.so.2.9.2 CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o CMakeFiles/ost_seq_alg.dir/conservation.cc.o CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/distance_map.cc.o CMakeFiles/ost_seq_alg.dir/entropy.cc.o CMakeFiles/ost_seq_alg.dir/global_align.cc.o CMakeFiles/ost_seq_alg.dir/ins_del.cc.o CMakeFiles/ost_seq_alg.dir/local_align.cc.o CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/variance_map.cc.o CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../../stage/lib/libost_seq_alg.so.2.9 ../../../../stage/lib/libost_seq_alg.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Built target ost_seq_alg /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h: In function 'int extract_aln_from_resi(std::vector >&, char*, char*, std::vector >, std::vector >, int)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h:545:21: warning: 'invmap' may be used uninitialized [-Wmaybe-uninitialized] 545 | NWalign_main(seqx, seqy, xlen, ylen, sequence[0],sequence[1], | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 | mol_type, invmap, 0, glocal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/NWalign.h:535:14: note: 'invmap' was declared here 535 | int *invmap; | ^~~~~~ [ 28%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/info/_ost_info.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_info.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_info.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/info/_ost_info.so CMakeFiles/_ost_info.dir/wrap_info.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/info/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/info/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Built target _ost_info make -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/depend make -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod/CMakeFiles/_ost_img.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data.cc.o -MF CMakeFiles/_ost_img.dir/export_data.cc.o.d -o CMakeFiles/_ost_img.dir/export_data.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_data.cc [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o -MF CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o.d -o CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_data_algorithm.cc [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom.cc.o [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bond.cc.o [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_extent.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom.cc.o -MF CMakeFiles/_ost_mol.dir/export_atom.cc.o.d -o CMakeFiles/_ost_mol.dir/export_atom.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_atom.cc [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_peak.cc.o [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_extent.cc.o -MF CMakeFiles/_ost_img.dir/export_extent.cc.o.d -o CMakeFiles/_ost_img.dir/export_extent.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_extent.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bond.cc.o -MF CMakeFiles/_ost_mol.dir/export_bond.cc.o.d -o CMakeFiles/_ost_mol.dir/export_bond.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_bond.cc [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain_view.cc.o [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_handle.cc.o -MF CMakeFiles/_ost_img.dir/export_image_handle.cc.o.d -o CMakeFiles/_ost_img.dir/export_image_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_image_handle.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_peak.cc.o -MF CMakeFiles/_ost_img.dir/export_peak.cc.o.d -o CMakeFiles/_ost_img.dir/export_peak.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_peak.cc [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_atom_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_atom_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_atom_view.cc [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_group.cc.o [ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain.cc.o -MF CMakeFiles/_ost_mol.dir/export_chain.cc.o.d -o CMakeFiles/_ost_mol.dir/export_chain.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_chain.cc [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_phase.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_phase.cc.o -MF CMakeFiles/_ost_img.dir/export_phase.cc.o.d -o CMakeFiles/_ost_img.dir/export_phase.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_phase.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_chain_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_chain_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_chain_view.cc [ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_point.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_group.cc.o -MF CMakeFiles/_ost_mol.dir/export_coord_group.cc.o.d -o CMakeFiles/_ost_mol.dir/export_coord_group.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_coord_group.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o -MF CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o.d -o CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_coord_frame.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_point.cc.o -MF CMakeFiles/_ost_img.dir/export_point.cc.o.d -o CMakeFiles/_ost_img.dir/export_point.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_point.cc [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_progress.cc.o [ 30%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity.cc.o [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_raster_image.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_progress.cc.o -MF CMakeFiles/_ost_img.dir/export_progress.cc.o.d -o CMakeFiles/_ost_img.dir/export_progress.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_progress.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_entity.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_raster_image.cc.o -MF CMakeFiles/_ost_img.dir/export_raster_image.cc.o.d -o CMakeFiles/_ost_img.dir/export_raster_image.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_raster_image.cc [ 30%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_editors.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_editors.cc.o -MF CMakeFiles/_ost_mol.dir/export_editors.cc.o.d -o CMakeFiles/_ost_mol.dir/export_editors.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_editors.cc [ 30%] Linking CXX shared library ../../../stage/lib/libost_conop.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_conop.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_conop.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_conop.so.2.9 -o ../../../stage/lib/libost_conop.so.2.9.2 CMakeFiles/ost_conop.dir/processor.cc.o CMakeFiles/ost_conop.dir/amino_acids.cc.o CMakeFiles/ost_conop.dir/conop.cc.o CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o CMakeFiles/ost_conop.dir/compound_lib_base.cc.o CMakeFiles/ost_conop.dir/heuristic.cc.o CMakeFiles/ost_conop.dir/diag.cc.o CMakeFiles/ost_conop.dir/rule_based.cc.o CMakeFiles/ost_conop.dir/model_check.cc.o CMakeFiles/ost_conop.dir/compound.cc.o CMakeFiles/ost_conop.dir/compound_lib.cc.o CMakeFiles/ost_conop.dir/ring_finder.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9 ../../../stage/lib/libost_conop.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 30%] Built target ost_conop make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 30%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o -MF CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o.d -o CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/svd_superpose.cc [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_size.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_size.cc.o -MF CMakeFiles/_ost_img.dir/export_size.cc.o.d -o CMakeFiles/_ost_img.dir/export_size.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_size.cc [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_mask.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_mask.cc.o -MF CMakeFiles/_ost_img.dir/export_mask.cc.o.d -o CMakeFiles/_ost_img.dir/export_mask.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_mask.cc [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_list.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_list.cc.o -MF CMakeFiles/_ost_img.dir/export_image_list.cc.o.d -o CMakeFiles/_ost_img.dir/export_image_list.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_image_list.cc [ 30%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_entity_view.cc [ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_map.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_map.cc.o -MF CMakeFiles/_ost_img.dir/export_map.cc.o.d -o CMakeFiles/_ost_img.dir/export_map.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/export_map.cc [ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_property_id.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_property_id.cc.o -MF CMakeFiles/_ost_mol.dir/export_property_id.cc.o.d -o CMakeFiles/_ost_mol.dir/export_property_id.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_property_id.cc In file included from /usr/include/x86_64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/basic_fun.h:12: In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::pair; _Args = {std::pair}; _Tp = std::pair]', inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::pair; _Args = {std::pair}; _Tp = std::pair]' at /usr/include/c++/14/bits/alloc_traits.h:575:17, inlined from 'void std::vector<_Tp, _Alloc>::_M_realloc_append(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/vector.tcc:634:26, inlined from 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/vector.tcc:123:21, inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_vector.h:1301:21, inlined from 'int trimComplex(std::vector > >&, std::vector >&, std::vector >&, std::vector&, const std::vector > >&, const std::vector >&, const std::vector >&, const std::vector&, const std::vector&, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:2955:33: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: 'dinter' may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h: In function 'int trimComplex(std::vector > >&, std::vector >&, std::vector >&, std::vector&, const std::vector > >&, const std::vector >&, const std::vector >&, const std::vector&, const std::vector&, int, int)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/USalign/MMalign.h:2908:12: note: 'dinter' was declared here 2908 | double dinter; | ^~~~~~ [ 31%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/wrap_img.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/wrap_img.cc.o -MF CMakeFiles/_ost_img.dir/wrap_img.cc.o.d -o CMakeFiles/_ost_img.dir/wrap_img.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/wrap_img.cc [ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/clash_score.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/clash_score.cc.o -MF CMakeFiles/ost_mol_alg.dir/clash_score.cc.o.d -o CMakeFiles/ost_mol_alg.dir/clash_score.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/clash_score.cc make -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/bitmap_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/bitmap_io.cc.o -MF CMakeFiles/ost_gfx.dir/bitmap_io.cc.o.d -o CMakeFiles/ost_gfx.dir/bitmap_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/bitmap_io.cc /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc: In function 'ost::bindings::MMAlignResult ost::bindings::WrappedMMAlign(const std::vector&, const std::vector&, const ost::seq::SequenceList&, const ost::seq::SequenceList&, const std::vector&, const std::vector&, bool, const std::map&)': /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'seqx' may be used uninitialized [-Wmaybe-uninitialized] 904 | if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 | seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 | ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 | chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 | sequence, d0_scale, fast_opt, chainmap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:551:11: note: 'seqx' was declared here 551 | char *seqx, *seqy; // for the protein sequence | ^~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'seqy' may be used uninitialized [-Wmaybe-uninitialized] 904 | if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 | seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 | ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 | chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 | sequence, d0_scale, fast_opt, chainmap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:551:18: note: 'seqy' was declared here 551 | char *seqx, *seqy; // for the protein sequence | ^~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'secx' may be used uninitialized [-Wmaybe-uninitialized] 904 | if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 | seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 | ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 | chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 | sequence, d0_scale, fast_opt, chainmap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:552:11: note: 'secx' was declared here 552 | char *secx, *secy; // for the secondary structure | ^~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'secy' may be used uninitialized [-Wmaybe-uninitialized] 904 | if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 | seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 | ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 | chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 | sequence, d0_scale, fast_opt, chainmap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/wrap_tmalign.cc:552:18: note: 'secy' was declared here 552 | char *secx, *secy; // for the secondary structure | ^~~~ [ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query.cc.o -MF CMakeFiles/_ost_mol.dir/export_query.cc.o.d -o CMakeFiles/_ost_mol.dir/export_query.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_query.cc [ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/exporter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/exporter.cc.o -MF CMakeFiles/ost_gfx.dir/exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/exporter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/exporter.cc [ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o -MF CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o.d -o CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/sec_structure_segments.cc [ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o -MF CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o.d -o CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/local_dist_diff_test.cc [ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o -MF CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o.d -o CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/distance_test_common.cc [ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o -MF CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o.d -o CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/distance_rmsd_test.cc [ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/collada_exporter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/collada_exporter.cc.o -MF CMakeFiles/ost_gfx.dir/collada_exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/collada_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/collada_exporter.cc [ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue.cc.o -MF CMakeFiles/_ost_mol.dir/export_residue.cc.o.d -o CMakeFiles/_ost_mol.dir/export_residue.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_residue.cc [ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_residue_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_residue_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_residue_view.cc [ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color.cc.o -MF CMakeFiles/ost_gfx.dir/color.cc.o.d -o CMakeFiles/ost_gfx.dir/color.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color.cc [ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/primitives.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/primitives.cc.o -MF CMakeFiles/ost_gfx.dir/primitives.cc.o.d -o CMakeFiles/ost_gfx.dir/primitives.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/primitives.cc [ 31%] Linking CXX shared library ../../../stage/lib/libost_bindings.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_bindings.dir/link.txt --verbose=1 [ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o -MF CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o.d -o CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/superpose_frames.cc /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_bindings.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_bindings.so.2.9 -o ../../../stage/lib/libost_bindings.so.2.9.2 CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_bindings.so.2.9.2 ../../../stage/lib/libost_bindings.so.2.9 ../../../stage/lib/libost_bindings.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 32%] Built target ost_bindings [ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o -MF CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o.d -o CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/filter_clashes.cc [ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o -MF CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o.d -o CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/construct_cbeta.cc [ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_surface.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_surface.cc.o -MF CMakeFiles/_ost_mol.dir/export_surface.cc.o.d -o CMakeFiles/_ost_mol.dir/export_surface.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_surface.cc [ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/entity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/entity.cc.o -MF CMakeFiles/ost_gfx.dir/entity.cc.o.d -o CMakeFiles/ost_gfx.dir/entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/entity.cc [ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/symmetry_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/symmetry_node.cc.o -MF CMakeFiles/ost_gfx.dir/symmetry_node.cc.o.d -o CMakeFiles/ost_gfx.dir/symmetry_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/symmetry_node.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_node.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_node.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_node.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_object.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_object.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_object.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_object.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object.cc In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/distance_rmsd_test.cc:1: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/distance_rmsd_test.cc:2: /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o -MF CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o.d -o CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/trajectory_analysis.cc [ 33%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/img/_ost_img.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_img.dir/link.txt --verbose=1 [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_prim.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_prim.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_prim.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_prim.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_prim.cc /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_img.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/img/_ost_img.so CMakeFiles/_ost_img.dir/export_data.cc.o CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o CMakeFiles/_ost_img.dir/export_extent.cc.o CMakeFiles/_ost_img.dir/export_image_handle.cc.o CMakeFiles/_ost_img.dir/export_peak.cc.o CMakeFiles/_ost_img.dir/export_phase.cc.o CMakeFiles/_ost_img.dir/export_point.cc.o CMakeFiles/_ost_img.dir/export_progress.cc.o CMakeFiles/_ost_img.dir/export_raster_image.cc.o CMakeFiles/_ost_img.dir/export_size.cc.o CMakeFiles/_ost_img.dir/export_mask.cc.o CMakeFiles/_ost_img.dir/export_image_list.cc.o CMakeFiles/_ost_img.dir/export_map.cc.o CMakeFiles/_ost_img.dir/wrap_img.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/img/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 33%] Built target _ost_img [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_test_object.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh:27, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh:31, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/entity.cc:39: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/entity.cc:52: /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ [ 33%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o -MF CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o.d -o CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_bounding_box.cc [ 33%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o -MF CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o.d -o CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_query_view_wrapper.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/input.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/input.cc.o -MF CMakeFiles/ost_gfx.dir/input.cc.o.d -o CMakeFiles/ost_gfx.dir/input.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/input.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o -MF CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o.d -o CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/structure_analysis.cc make -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 33%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o -MF CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o.d -o CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/wrap_alg.cc [ 33%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_torsion.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_torsion.cc.o -MF CMakeFiles/_ost_mol.dir/export_torsion.cc.o.d -o CMakeFiles/_ost_mol.dir/export_torsion.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_torsion.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o -MF CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o.d -o CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/consistency_checks.cc In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_test_object.hh:28, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_test_object.cc:31: /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object.hh:124:31: warning: 'virtual geom::AlignedCuboid ost::gfx::GfxObj::GetBoundingBox(bool) const' was hidden [-Woverloaded-virtual=] 124 | virtual geom::AlignedCuboid GetBoundingBox(bool use_tf=false) const; | ^~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_test_object.hh:40:31: note: by 'virtual geom::AlignedCuboid ost::gfx::GfxTestObj::GetBoundingBox() const' 40 | virtual geom::AlignedCuboid GetBoundingBox() const; | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/filter_clashes.cc:19: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/filter_clashes.cc:20: /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/pdbize.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/pdbize.cc.o -MF CMakeFiles/ost_mol_alg.dir/pdbize.cc.o.d -o CMakeFiles/ost_mol_alg.dir/pdbize.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/pdbize.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/prim_list.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/prim_list.cc.o -MF CMakeFiles/ost_gfx.dir/prim_list.cc.o.d -o CMakeFiles/ost_gfx.dir/prim_list.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/prim_list.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o -MF CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o.d -o CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/adjacency_bitmap.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/scene.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/scene.cc.o -MF CMakeFiles/ost_gfx.dir/scene.cc.o.d -o CMakeFiles/ost_gfx.dir/scene.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/scene.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/selection.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/selection.cc.o -MF CMakeFiles/ost_gfx.dir/selection.cc.o.d -o CMakeFiles/ost_gfx.dir/selection.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/selection.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o -MF CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o.d -o CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/domain_find.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/domain_find.cc.o -MF CMakeFiles/ost_mol_alg.dir/domain_find.cc.o.d -o CMakeFiles/ost_mol_alg.dir/domain_find.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/domain_find.cc [ 33%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/surface.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/surface.cc.o -MF CMakeFiles/ost_gfx.dir/surface.cc.o.d -o CMakeFiles/ost_gfx.dir/surface.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/surface.cc [ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o -MF CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o.d -o CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/similarity_matrix.cc [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/accessibility.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/accessibility.cc.o -MF CMakeFiles/ost_mol_alg.dir/accessibility.cc.o.d -o CMakeFiles/ost_mol_alg.dir/accessibility.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc [ 35%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient.cc.o -MF CMakeFiles/ost_gfx.dir/gradient.cc.o.d -o CMakeFiles/ost_gfx.dir/gradient.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gradient.cc [ 35%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_visitor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_visitor.cc.o -MF CMakeFiles/_ost_mol.dir/export_visitor.cc.o.d -o CMakeFiles/_ost_mol.dir/export_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_visitor.cc [ 35%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/wrap_mol.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/wrap_mol.cc.o -MF CMakeFiles/_ost_mol.dir/wrap_mol.cc.o.d -o CMakeFiles/_ost_mol.dir/wrap_mol.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/wrap_mol.cc [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o -MF CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o.d -o CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/sec_struct.cc In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/scene.cc:49: /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object.hh:124:31: warning: 'virtual geom::AlignedCuboid ost::gfx::GfxObj::GetBoundingBox(bool) const' was hidden [-Woverloaded-virtual=] 124 | virtual geom::AlignedCuboid GetBoundingBox(bool use_tf=false) const; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/scene.cc:50: /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_test_object.hh:40:31: note: by 'virtual geom::AlignedCuboid ost::gfx::GfxTestObj::GetBoundingBox() const' 40 | virtual geom::AlignedCuboid GetBoundingBox() const; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/surface.hh:32, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/surface.cc:28: /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 35%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/export_entity_property_mapper.cc [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o -MF CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o.d -o CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/nonstandard.cc [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/molck.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/molck.cc.o -MF CMakeFiles/ost_mol_alg.dir/molck.cc.o.d -o CMakeFiles/ost_mol_alg.dir/molck.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/molck.cc [ 35%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient_manager.cc.o -MF CMakeFiles/ost_gfx.dir/gradient_manager.cc.o.d -o CMakeFiles/ost_gfx.dir/gradient_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gradient_manager.cc In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:1: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:66:20: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:2: /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:66:20: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:66:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:66:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o -MF CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o.d -o CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc [ 35%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_filter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_filter.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_filter.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_filter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/export_filter.cc [ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o -MF CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o.d -o CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/entity_to_density.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array.cc.o -MF CMakeFiles/ost_gfx.dir/vertex_array.cc.o.d -o CMakeFiles/ost_gfx.dir/vertex_array.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/vertex_array.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o -MF CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o.d -o CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/vertex_array_helper.cc In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:445:21: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:445:21: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:445:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:445:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:448:21: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:448:21: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:448:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:448:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:453:23: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:453:23: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:453:23: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/contact_overlap.cc:453:23: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/material.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/material.cc.o -MF CMakeFiles/ost_gfx.dir/material.cc.o.d -o CMakeFiles/ost_gfx.dir/material.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/material.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/povray.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/povray.cc.o -MF CMakeFiles/ost_gfx.dir/povray.cc.o.d -o CMakeFiles/ost_gfx.dir/povray.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/povray.cc [ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/biounit.cc.o [ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/gdt.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/biounit.cc.o -MF CMakeFiles/ost_mol_alg.dir/biounit.cc.o.d -o CMakeFiles/ost_mol_alg.dir/biounit.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/biounit.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/gdt.cc.o -MF CMakeFiles/ost_mol_alg.dir/gdt.cc.o.d -o CMakeFiles/ost_mol_alg.dir/gdt.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/gdt.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gost_exporter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gost_exporter.cc.o -MF CMakeFiles/ost_gfx.dir/gost_exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/gost_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/gost_exporter.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/texture.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/texture.cc.o -MF CMakeFiles/ost_gfx.dir/texture.cc.o.d -o CMakeFiles/ost_gfx.dir/texture.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/texture.cc [ 36%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/export_normalizer.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/color_op.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_element_color_op.cc [ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_chain_color_op.cc [ 37%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/export_transcendentals.cc /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/vertex_array.cc:1311:8: warning: 'geom::Vec3 ost::gfx::{anonymous}::make_aaline_edge(const geom::Vec2&, const geom::Vec2&, float)' defined but not used [-Wunused-function] 1311 | Vec3 make_aaline_edge(const Vec2& c1, const Vec2& c0, float s) | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/vertex_array.cc:1239:8: warning: 'void ost::gfx::{anonymous}::render_aalines(AALineList&, float, float)' defined but not used [-Wunused-function] 1239 | void render_aalines(AALineList& line_list, float w, float r) | ^~~~~~~~~~~~~~ [ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/uniform_color_op.cc [ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_color_op.cc [ 37%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_polar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_polar.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_polar.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_polar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/export_polar.cc In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /usr/include/c++/14/complex:45, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_view.hh:24, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/accessibility.hh:23, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:1: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_base.hh:25, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_view.hh:27: /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/entity_view_color_op.cc In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:778:21: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:778:21: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:778:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:778:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:785:32: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:785:32: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:785:32: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:785:32: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:788:21: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:788:21: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:788:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:788:21: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:803:35: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:803:35: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:803:35: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:803:35: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:808:35: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:808:35: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:808:35: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/accessibility.cc:808:35: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/basic_gradient_color_op.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_chain_color_op.cc:23: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_element_color_op.cc:22: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/domain_find.cc:11: In member function 'void ost::mol::alg::AdjacencyBitmap::set(size_t, size_t, bool, bool)', inlined from 'ost::mol::alg::AdjacencyBitmap::AdjacencyBitmap(const ost::mol::alg::DistanceMatrix&, const ost::mol::alg::DistanceMatrix&, Real, Real, int, int)' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/adjacency_bitmap.hh:49:16, inlined from 'static ost::mol::alg::DomainsPtr ost::mol::alg::Domains::FromDistMats(const ost::mol::alg::DistanceMatrix&, const ost::mol::alg::DistanceMatrix&, Real, Real, Real, int, bool, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/domain_find.cc:363:37: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/adjacency_bitmap.hh:109:23: warning: '*(uint64_t*)' may be used uninitialized [-Wmaybe-uninitialized] 109 | data_[byte_index] &= ~(one << bit_index); | ~~~~~~~~~~~~~~~~^ [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_level_color_op.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o -MF CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_detail.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cartoon_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/surface.hh:32, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/basic_gradient_color_op.cc:22: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/surface.hh:102:8: note: by 'ost::gfx::Surface::Apply' 102 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/debug_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/sline_renderer.cc [ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/line_trace_renderer.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o -MF CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/backbone_trace.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o -MF CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/connect_renderer_base.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o -MF CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer_base.cc /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc: In member function 'void ost::gfx::impl::CustomRenderer::PrepareRendering(ost::gfx::impl::GfxView&, ost::gfx::IndexedVertexArray&, bool)': /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:67:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 67 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:67:54: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 67 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:68:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 68 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:68:55: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 68 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc: In member function 'virtual void ost::gfx::impl::CustomRenderer::RenderPov(ost::gfx::PovState&, const std::string&)': /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:93:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 93 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:93:52: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 93 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:94:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 94 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.cc:94:53: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 94 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.hh:24, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.cc:19: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.cc:23: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ In file included from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /usr/include/c++/14/complex:45, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/find_membrane.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc:1: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc:1053:20: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26: /usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/ios:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc:1053:20: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc:1053:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/find_membrane.cc:1053:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o -MF CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/mapped_property.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh:27, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/debug_renderer.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/debug_renderer.cc:19: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o -MF CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/tabulated_trig.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o -MF CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/fast_spheres.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/render_options.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh:35, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/backbone_trace.hh:29, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/backbone_trace.cc:22: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_render_options.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/custom_render_options.cc [ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cpk_render_options.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/simple_render_options.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/sline_render_options.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:26: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc: In member function 'void ost::gfx::impl::SimpleRenderer::PrepareRendering(ost::gfx::impl::GfxView&, ost::gfx::IndexedVertexArray&)': /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:125:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 125 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:125:54: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 125 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:126:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 126 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:126:55: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 126 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc: In member function 'virtual void ost::gfx::impl::SimpleRenderer::RenderPov(ost::gfx::PovState&, const std::string&)': /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:203:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 203 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:203:52: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 203 | const geom::Vec3& p0=it->bond.GetFirst().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:204:23: warning: possibly dangling reference to a temporary [-Wdangling-reference] 204 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ^~ /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.cc:204:53: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()' 204 | const geom::Vec3& p2=it->bond.GetSecond().GetPos(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ [ 41%] Linking CXX shared library ../../../../stage/lib/libost_mol_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/atom_scattering_properties.txt /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/atom_scattering_properties.txt cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/stereo_chemical_props.txt /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/stereo_chemical_props.txt cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_alg.dir/link.txt --verbose=1 [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_trace_render_options.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cartoon_render_options.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/trace_render_options.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/map_handle_color_op.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/map_iso.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/map_iso.cc.o -MF CMakeFiles/ost_gfx.dir/map_iso.cc.o.d -o CMakeFiles/ost_gfx.dir/map_iso.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/map_iso.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/map_slab.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/map_slab.cc.o -MF CMakeFiles/ost_gfx.dir/map_slab.cc.o.d -o CMakeFiles/ost_gfx.dir/map_slab.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/map_slab.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen.cc [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_s.cc /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_mol_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol_alg.so.2.9 -o ../../../../stage/lib/libost_mol_alg.so.2.9.2 CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o CMakeFiles/ost_mol_alg.dir/clash_score.cc.o CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o CMakeFiles/ost_mol_alg.dir/pdbize.cc.o CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o CMakeFiles/ost_mol_alg.dir/domain_find.cc.o CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o CMakeFiles/ost_mol_alg.dir/accessibility.cc.o CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o CMakeFiles/ost_mol_alg.dir/molck.cc.o CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o CMakeFiles/ost_mol_alg.dir/biounit.cc.o CMakeFiles/ost_mol_alg.dir/gdt.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_db.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9 ../../../../stage/lib/libost_mol_alg.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 41%] Built target ost_mol_alg make -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/depend [ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_o.cc make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 41%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/io_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/io_manager.cc.o -MF CMakeFiles/ost_io.dir/io_manager.cc.o.d -o CMakeFiles/ost_io.dir/io_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/io_manager.cc [ 42%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_octree.cc [ 42%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o -MF CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/octree_isocont.cc [ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/convert.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/convert.cc.o -MF CMakeFiles/ost_io.dir/convert.cc.o.d -o CMakeFiles/ost_io.dir/convert.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/convert.cc [ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/io_utils.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/io_utils.cc.o -MF CMakeFiles/ost_io.dir/io_utils.cc.o.d -o CMakeFiles/ost_io.dir/io_utils.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/io_utils.cc [ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.cc [ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.cc [ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_sdf_handler.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mmcif_handler.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.cc [ 43%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/img/alg/_ost_img_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_img_alg.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_img_alg.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/img/alg/_ost_img_alg.so CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o CMakeFiles/_ost_img_alg.dir/export_filter.cc.o CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o CMakeFiles/_ost_img_alg.dir/export_polar.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_img_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/img/alg/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 43%] Built target _ost_img_alg [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_writer.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/save_entity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/save_entity.cc.o -MF CMakeFiles/ost_io.dir/mol/save_entity.cc.o.d -o CMakeFiles/ost_io.dir/mol/save_entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/save_entity.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/load_entity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/load_entity.cc.o -MF CMakeFiles/ost_io.dir/mol/load_entity.cc.o.d -o CMakeFiles/ost_io.dir/mol/load_entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_entity.cc [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.cc /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.cc: In constructor 'ost::io::PQRReader::PQRReader(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.cc:61:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 61 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.cc:28: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ [ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/load_surface.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/load_surface.cc.o -MF CMakeFiles/ost_io.dir/mol/load_surface.cc.o.d -o CMakeFiles/ost_io.dir/mol/load_surface.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_surface.cc [ 45%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/mol/_ost_mol.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol.dir/link.txt --verbose=1 /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.cc: In member function 'void ost::io::PDBReader::Init(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.cc:91:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 91 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.cc:20: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.cc:99:49: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 99 | if(boost::iequals(boost::filesystem::extension(loc), ".pqr")) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.cc: In constructor 'ost::io::CRDReader::CRDReader(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.cc:63:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 63 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.cc:27: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.cc: In constructor 'ost::io::MAEReader::MAEReader(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.cc:60:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 60 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.cc:31: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc: In constructor 'ost::io::PDBWriter::PDBWriter(const boost::filesystem::path&, const ost::io::IOProfile&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc:395:58: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 395 | if (boost::iequals(".pqr", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc:28: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc:398:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 398 | if (boost::iequals(".gz", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc: In constructor 'ost::io::PDBWriter::PDBWriter(const String&, const ost::io::IOProfile&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc:414:58: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 414 | if (boost::iequals(".pqr", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.cc:417:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 417 | if (boost::iequals(".gz", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_mol.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/mol/_ost_mol.so CMakeFiles/_ost_mol.dir/export_atom.cc.o CMakeFiles/_ost_mol.dir/export_atom_view.cc.o CMakeFiles/_ost_mol.dir/export_bond.cc.o CMakeFiles/_ost_mol.dir/export_chain.cc.o CMakeFiles/_ost_mol.dir/export_chain_view.cc.o CMakeFiles/_ost_mol.dir/export_coord_group.cc.o CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o CMakeFiles/_ost_mol.dir/export_editors.cc.o CMakeFiles/_ost_mol.dir/export_entity.cc.o CMakeFiles/_ost_mol.dir/export_entity_view.cc.o CMakeFiles/_ost_mol.dir/export_property_id.cc.o CMakeFiles/_ost_mol.dir/export_query.cc.o CMakeFiles/_ost_mol.dir/export_residue.cc.o CMakeFiles/_ost_mol.dir/export_residue_view.cc.o CMakeFiles/_ost_mol.dir/export_surface.cc.o CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o CMakeFiles/_ost_mol.dir/export_torsion.cc.o CMakeFiles/_ost_mol.dir/export_visitor.cc.o CMakeFiles/_ost_mol.dir/wrap_mol.cc.o CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/./__init__.pyc\",\"__init__.py\",doraise=True)" [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o -MF CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o.d -o CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/chemdict_parser.cc make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 46%] Built target _ost_mol [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/io_profile.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/io_profile.cc.o -MF CMakeFiles/ost_io.dir/mol/io_profile.cc.o.d -o CMakeFiles/ost_io.dir/mol/io_profile.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/io_profile.cc /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.cc: In member function 'virtual void ost::io::EntityIOPDBHandler::Export(const ost::mol::EntityView&, const boost::filesystem::path&) const': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.cc:52:50: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 52 | if (boost::iequals(boost::filesystem::extension(loc), ".pqr")) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.cc:27: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.cc: In member function 'void ost::io::SDFReader::ClearState(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.cc:125:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 125 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.cc:24: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.cc: In function 'std::pair ost::io::{anonymous}::detect_files(const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.cc:36:45: warning: 'boost::filesystem::path boost::filesystem::change_extension(const path&, const path&)' is deprecated: Use path::replace_extension() instead [-Wdeprecated-declarations] 36 | return std::make_pair(bf::change_extension(loc, ".vert"), | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.cc:25: /usr/include/boost/filesystem/convenience.hpp:41:13: note: declared here 41 | inline path change_extension(const path& p, const path& new_extension) | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.cc:37:45: warning: 'boost::filesystem::path boost::filesystem::change_extension(const path&, const path&)' is deprecated: Use path::replace_extension() instead [-Wdeprecated-declarations] 37 | bf::change_extension(loc, ".face")); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/boost/filesystem/convenience.hpp:41:13: note: declared here 41 | inline path change_extension(const path& p, const path& new_extension) | ^~~~~~~~~~~~~~~~ make -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 46%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_sequence.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_sequence.cc.o -MF CMakeFiles/_ost_seq.dir/export_sequence.cc.o.d -o CMakeFiles/_ost_seq.dir/export_sequence.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod/export_sequence.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/dcd_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/dcd_io.cc.o -MF CMakeFiles/ost_io.dir/mol/dcd_io.cc.o.d -o CMakeFiles/ost_io.dir/mol/dcd_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/dcd_io.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/star_parser.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/star_parser.cc.o -MF CMakeFiles/ost_io.dir/mol/star_parser.cc.o.d -o CMakeFiles/ost_io.dir/mol/star_parser.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_parser.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/star_writer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/star_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/star_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/star_writer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_reader.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_info.cc In file included from /usr/include/eigen3/Eigen/Core:341, from /usr/include/eigen3/Eigen/QR:11, from /usr/include/eigen3/Eigen/SVD:11, from /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cartoon_renderer.cc:26: /usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h: In function 'static void Eigen::internal::trmv_selector::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose, 1, -1, true>, 1, -1, false> >; int Mode = 6]': /usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: warning: 'result' may be used uninitialized [-Wmaybe-uninitialized] 327 | internal::triangular_matrix_vector_product | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 | | ~~~~~~~~~ 332 | ::run(actualLhs.rows(),actualLhs.cols(), | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 | actualLhs.data(),actualLhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 | actualRhsPtr,1, | ~~~~~~~~~~~~~~~ 335 | dest.data(),dest.innerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 | actualAlpha); | ~~~~~~~~~~~~ /usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type 'const float*' to 'static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = float; bool ConjLhs = false; RhsScalar = float; bool ConjRhs = false; int Version = 0]' declared here 105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_writer.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_str.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_str.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_str.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_str.cc [ 46%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o -MF CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o.d -o CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod/export_profile_handle.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_str.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_str.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_str.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_str.cc [ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_str.cc /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.cc: In member function 'void ost::io::StarWriter::Write(const String&, const String&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.cc:52:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 52 | if (boost::iequals(".gz", boost::filesystem::extension(filename))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/include/boost/filesystem.hpp:21, from /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.cc:22: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/stereochemical_params_reader.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/omf.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/omf.cc.o -MF CMakeFiles/ost_io.dir/mol/omf.cc.o.d -o CMakeFiles/ost_io.dir/mol/omf.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/omf.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/clustal_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/load.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/load.cc.o -MF CMakeFiles/ost_io.dir/seq/load.cc.o.d -o CMakeFiles/ost_io.dir/seq/load.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/load.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/save.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/save.cc.o -MF CMakeFiles/ost_io.dir/seq/save.cc.o.d -o CMakeFiles/ost_io.dir/seq/save.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/save.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/fasta_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pir_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/promod_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.cc [ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/load_map.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/load_map.cc.o -MF CMakeFiles/ost_io.dir/img/load_map.cc.o.d -o CMakeFiles/ost_io.dir/img/load_map.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/load_map.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_spi_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_situs_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_mrc_handler.cc /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.cc: In member function 'virtual void ost::io::HhmIOHandler::Import(ost::seq::ProfileHandle&, const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.cc:133:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 133 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.cc:27: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.cc: In member function 'virtual void ost::io::PssmIOHandler::Import(ost::seq::ProfileHandle&, const boost::filesystem::path&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.cc:47:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 47 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.cc:27: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dm3_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_tiff_handler.cc /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.cc: In member function 'virtual void ost::io::MapIODxHandler::Import(ost::img::MapHandle&, const boost::filesystem::path&, const ost::io::ImageFormatBase&)': /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.cc:97:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 97 | if (boost::iequals(".gz", boost::filesystem::extension(loc))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.cc:31: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ [ 48%] Linking CXX shared library ../../../stage/lib/libost_gfx.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/test_texture.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/textures/test_texture.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/glyph_texture.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/textures/glyph_texture.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gfx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_gfx.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_gfx.so.2.9 -o ../../../stage/lib/libost_gfx.so.2.9.2 CMakeFiles/ost_gfx.dir/bitmap_io.cc.o CMakeFiles/ost_gfx.dir/exporter.cc.o CMakeFiles/ost_gfx.dir/collada_exporter.cc.o CMakeFiles/ost_gfx.dir/color.cc.o CMakeFiles/ost_gfx.dir/primitives.cc.o CMakeFiles/ost_gfx.dir/entity.cc.o CMakeFiles/ost_gfx.dir/symmetry_node.cc.o CMakeFiles/ost_gfx.dir/gfx_node.cc.o CMakeFiles/ost_gfx.dir/gfx_object.cc.o CMakeFiles/ost_gfx.dir/gfx_prim.cc.o CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o CMakeFiles/ost_gfx.dir/input.cc.o CMakeFiles/ost_gfx.dir/prim_list.cc.o CMakeFiles/ost_gfx.dir/scene.cc.o CMakeFiles/ost_gfx.dir/selection.cc.o CMakeFiles/ost_gfx.dir/surface.cc.o CMakeFiles/ost_gfx.dir/gradient.cc.o CMakeFiles/ost_gfx.dir/gradient_manager.cc.o CMakeFiles/ost_gfx.dir/vertex_array.cc.o CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o CMakeFiles/ost_gfx.dir/material.cc.o CMakeFiles/ost_gfx.dir/povray.cc.o CMakeFiles/ost_gfx.dir/gost_exporter.cc.o CMakeFiles/ost_gfx.dir/texture.cc.o CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o CMakeFiles/ost_gfx.dir/map_iso.cc.o CMakeFiles/ost_gfx.dir/map_slab.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_img_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_db.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dat_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_ipl_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_jpk_handler.cc linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_gfx.so.2.9.2 ../../../stage/lib/libost_gfx.so.2.9 ../../../stage/lib/libost_gfx.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 48%] Built target ost_gfx [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_nanoscope_handler.cc [ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_png_handler.cc [ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_df3_handler.cc [ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/image_format.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/image_format.cc.o -MF CMakeFiles/ost_io.dir/img/image_format.cc.o.d -o CMakeFiles/ost_io.dir/img/image_format.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/image_format.cc [ 50%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/wrap_seq.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/wrap_seq.cc.o -MF CMakeFiles/_ost_seq.dir/wrap_seq.cc.o.d -o CMakeFiles/_ost_seq.dir/wrap_seq.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod/wrap_seq.cc [ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/tiff_util.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/tiff_util.cc.o -MF CMakeFiles/ost_io.dir/img/tiff_util.cc.o.d -o CMakeFiles/ost_io.dir/img/tiff_util.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/tiff_util.cc [ 50%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/seq/_ost_seq.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_seq.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_seq.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/seq/_ost_seq.so CMakeFiles/_ost_seq.dir/export_sequence.cc.o CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o CMakeFiles/_ost_seq.dir/wrap_seq.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Built target _ost_seq make -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/depend make -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/depend make -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod/CMakeFiles/_ost_db.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build make -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Building CXX object modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o -MF CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o.d -o CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/wrap_bindings.cc [ 50%] Building CXX object modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o [ 50%] Building CXX object modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o -MF CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o.d -o CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/export_tmalign.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o -MF CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o.d -o CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/wrap_seq_alg.cc [ 50%] Building CXX object modules/db/pymod/CMakeFiles/_ost_db.dir/wrap_db.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/pymod/CMakeFiles/_ost_db.dir/wrap_db.cc.o -MF CMakeFiles/_ost_db.dir/wrap_db.cc.o.d -o CMakeFiles/_ost_db.dir/wrap_db.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/pymod/wrap_db.cc [ 50%] Building CXX object modules/db/pymod/CMakeFiles/_ost_db.dir/export_linear_db.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/pymod/CMakeFiles/_ost_db.dir/export_linear_db.cc.o -MF CMakeFiles/_ost_db.dir/export_linear_db.cc.o.d -o CMakeFiles/_ost_db.dir/export_linear_db.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/db/pymod/export_linear_db.cc [ 50%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/bindings/_ost_bindings.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_bindings.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_bindings.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/bindings/_ost_bindings.so CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_bindings.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/lga.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./lga.pyc\",\"lga.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/hbplus.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hbplus.pyc\",\"hbplus.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/msms.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./msms.pyc\",\"msms.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/tmtools.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./tmtools.pyc\",\"tmtools.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/dssp.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./dssp.pyc\",\"dssp.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/clustalw.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./clustalw.pyc\",\"clustalw.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/utils.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./utils.pyc\",\"utils.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/naccess.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./naccess.pyc\",\"naccess.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/hhblits.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits.pyc\",\"hhblits.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/hhblits2.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits2.pyc\",\"hhblits2.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/hhblits3.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./hhblits3.pyc\",\"hhblits3.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/blast.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./blast.pyc\",\"blast.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/cadscore.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./cadscore.pyc\",\"cadscore.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/kclust.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./kclust.pyc\",\"kclust.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/ialign.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./ialign.pyc\",\"ialign.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/mmseqs2.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./mmseqs2.pyc\",\"mmseqs2.py\",doraise=True)" [ 50%] Linking CXX shared library ../../../stage/lib/libost_io.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod/dockq.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/bindings/./dockq.pyc\",\"dockq.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_io.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_io.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_io.so.2.9 -o ../../../stage/lib/libost_io.so.2.9.2 CMakeFiles/ost_io.dir/io_manager.cc.o CMakeFiles/ost_io.dir/convert.cc.o CMakeFiles/ost_io.dir/io_utils.cc.o CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o CMakeFiles/ost_io.dir/mol/save_entity.cc.o CMakeFiles/ost_io.dir/mol/load_entity.cc.o CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o CMakeFiles/ost_io.dir/mol/load_surface.cc.o CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o CMakeFiles/ost_io.dir/mol/io_profile.cc.o CMakeFiles/ost_io.dir/mol/dcd_io.cc.o CMakeFiles/ost_io.dir/mol/star_parser.cc.o CMakeFiles/ost_io.dir/mol/star_writer.cc.o CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o CMakeFiles/ost_io.dir/mol/pdb_str.cc.o CMakeFiles/ost_io.dir/mol/sdf_str.cc.o CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o CMakeFiles/ost_io.dir/mol/omf.cc.o CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o CMakeFiles/ost_io.dir/seq/load.cc.o CMakeFiles/ost_io.dir/seq/save.cc.o CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o CMakeFiles/ost_io.dir/img/load_map.cc.o CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o CMakeFiles/ost_io.dir/img/image_format.cc.o CMakeFiles/ost_io.dir/img/tiff_util.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_img_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linumake[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Built target _ost_bindings [ 50%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/db/_ost_db.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_db.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_db.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/db/_ost_db.so CMakeFiles/_ost_db.dir/export_linear_db.cc.o CMakeFiles/_ost_db.dir/wrap_db.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/db/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/db/./__init__.pyc\",\"__init__.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Built target _ost_db make -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/_ost_conop.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_heuristic.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/wrap_conop.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_rule_based.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/wrap_conop.cc.o -MF CMakeFiles/_ost_conop.dir/wrap_conop.cc.o.d -o CMakeFiles/_ost_conop.dir/wrap_conop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/wrap_conop.cc [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_conop.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_compound.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_diag.cc.o [ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_processor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_compound.cc.o -MF CMakeFiles/_ost_conop.dir/export_compound.cc.o.d -o CMakeFiles/_ost_conop.dir/export_compound.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_compound.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_processor.cc.o -MF CMakeFiles/_ost_conop.dir/export_processor.cc.o.d -o CMakeFiles/_ost_conop.dir/export_processor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_processor.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_heuristic.cc.o -MF CMakeFiles/_ost_conop.dir/export_heuristic.cc.o.d -o CMakeFiles/_ost_conop.dir/export_heuristic.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_heuristic.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o -MF CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o.d -o CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_amino_acids.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_conop.cc.o -MF CMakeFiles/_ost_conop.dir/export_conop.cc.o.d -o CMakeFiles/_ost_conop.dir/export_conop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_conop.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_diag.cc.o -MF CMakeFiles/_ost_conop.dir/export_diag.cc.o.d -o CMakeFiles/_ost_conop.dir/export_diag.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_diag.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_rule_based.cc.o -MF CMakeFiles/_ost_conop.dir/export_rule_based.cc.o.d -o CMakeFiles/_ost_conop.dir/export_rule_based.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_rule_based.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o -MF CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o.d -o CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/export_ring_finder.cc x-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libparasail.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_io.so.2.9.2 ../../../stage/lib/libost_io.so.2.9 ../../../stage/lib/libost_io.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 51%] Built target ost_io make -f modules/conop/src/CMakeFiles/chemdict_tool.dir/build.make modules/conop/src/CMakeFiles/chemdict_tool.dir/depend make -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/chemdict_tool.dir/DependInfo.cmake "--color=" make -f modules/io/tests/CMakeFiles/test_mae_standalone.dir/build.make modules/io/tests/CMakeFiles/test_mae_standalone.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_mae_standalone.dir/DependInfo.cmake "--color=" make -f modules/mol/alg/src/CMakeFiles/lddt.dir/build.make modules/mol/alg/src/CMakeFiles/lddt.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/lddt.dir/DependInfo.cmake "--color=" make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f tools/molck/CMakeFiles/molck.dir/build.make tools/molck/CMakeFiles/molck.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/tools/molck /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tools/molck /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tools/molck/CMakeFiles/molck.dir/DependInfo.cmake "--color=" [ 51%] Generating tools/moc_tool_options_win.cpp make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_win.cpp_parameters make -f modules/io/tests/CMakeFiles/test_mae_standalone.dir/build.make modules/io/tests/CMakeFiles/test_mae_standalone.dir/build [ 51%] Generating data_viewer/moc_argand.cpp make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 51%] Generating data_viewer/moc_data_viewer.cpp make -f modules/mol/alg/src/CMakeFiles/lddt.dir/build.make modules/mol/alg/src/CMakeFiles/lddt.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_argand.cpp_parameters make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer.cpp_parameters make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 52%] Generating data_viewer/moc_fft_panel.cpp make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f tools/molck/CMakeFiles/molck.dir/build.make tools/molck/CMakeFiles/molck.dir/build [ 51%] Generating data_viewer/moc_data_viewer_panel_base.cpp make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer_panel_base.cpp_parameters make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/src/CMakeFiles/chemdict_tool.dir/build.make modules/conop/src/CMakeFiles/chemdict_tool.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_fft_panel.cpp_parameters make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 52%] Building CXX object modules/io/tests/CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -MF CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o.d -o CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_mae_standalone.cc [ 52%] Building CXX object modules/mol/alg/src/CMakeFiles/lddt.dir/lddt.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/lddt.dir/lddt.cc.o -MF CMakeFiles/lddt.dir/lddt.cc.o.d -o CMakeFiles/lddt.dir/lddt.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/lddt.cc [ 52%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/forcefield.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/forcefield.cc.o -MF CMakeFiles/ost_mol_mm.dir/forcefield.cc.o.d -o CMakeFiles/ost_mol_mm.dir/forcefield.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/forcefield.cc [ 53%] Building CXX object tools/molck/CMakeFiles/molck.dir/main.cc.o [ 53%] Building CXX object modules/conop/src/CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tools/molck && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT tools/molck/CMakeFiles/molck.dir/main.cc.o -MF CMakeFiles/molck.dir/main.cc.o.d -o CMakeFiles/molck.dir/main.cc.o -c /build/reproducible-path/openstructure-2.9.2/tools/molck/main.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/src/CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -MF CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o.d -o CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/src/chemdict_tool.cc [ 53%] Generating data_viewer/moc_null_overlay.cpp [ 53%] Generating data_viewer/moc_info_panel.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_null_overlay.cpp_parameters [ 53%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o -MF CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o.d -o CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/ff_reader.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_info_panel.cpp_parameters [ 53%] Generating data_viewer/moc_overlay_base.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_base.cpp_parameters [ 53%] Generating data_viewer/moc_overlay_manager_gui.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_manager_gui.cpp_parameters [ 53%] Generating data_viewer/moc_pointlist_overlay_base.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_pointlist_overlay_base.cpp_parameters [ 53%] Generating messages/moc_log_reader.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_log_reader.cpp_parameters [ 53%] Generating messages/moc_message_box_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_box_widget.cpp_parameters [ 53%] Generating messages/moc_message_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_widget.cpp_parameters [ 53%] Generating moc_dock_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_dock_widget.cpp_parameters [ 53%] Generating moc_file_browser.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_browser.cpp_parameters [ 55%] Generating moc_file_type_dialog.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_type_dialog.cpp_parameters [ 55%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o -MF CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o.d -o CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/buildingblock.cc [ 55%] Generating moc_file_viewer.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_viewer.cpp_parameters [ 55%] Generating moc_gl_canvas.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_canvas.cpp_parameters [ 55%] Generating moc_gl_win.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_win.cpp_parameters [ 55%] Generating moc_gosty_app.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty_app.cpp_parameters [ 55%] Generating moc_main.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp_parameters [ 55%] Generating moc_main_area.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main_area.cpp_parameters [ 55%] Generating moc_main_window.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main_window.cpp_parameters [ 55%] Generating moc_perspective.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_perspective.cpp_parameters [ 55%] Generating moc_scene_menu.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_menu.cpp_parameters [ 56%] Generating moc_scene_selection.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_selection.cpp_parameters [ 56%] Generating moc_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget.cpp_parameters [ 56%] Generating moc_widget_geom_handler.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_geom_handler.cpp_parameters [ 56%] Generating moc_widget_pool.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_pool.cpp_parameters [ 56%] Generating panels/moc_bottom_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_bottom_bar.cpp_parameters [ 56%] Generating panels/moc_button_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_bar.cpp_parameters [ 56%] Generating panels/moc_button_box.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_box.cpp_parameters [ 57%] Generating panels/moc_drop_box.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_drop_box.cpp_parameters [ 57%] Generating panels/moc_event_button.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_event_button.cpp_parameters [ 57%] Generating panels/moc_panel_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar.cpp_parameters [ 57%] Generating panels/moc_panel_bar_widget_holder.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar_widget_holder.cpp_parameters [ 57%] Generating panels/moc_panel_manager.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_manager.cpp_parameters [ 57%] Generating panels/moc_panel_widget_container.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_widget_container.cpp_parameters [ 57%] Generating panels/moc_side_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_side_bar.cpp_parameters [ 57%] Generating panels/moc_splitter_panel_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_splitter_panel_bar.cpp_parameters [ 57%] Generating panels/moc_tabbed_panel_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_tabbed_panel_bar.cpp_parameters [ 57%] Generating python_shell/moc_completer_base.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_completer_base.cpp_parameters [ 57%] Generating python_shell/moc_gutter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_gutter.cpp_parameters [ 57%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/gromacs_block_modifiers.cc [ 57%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/heuristic_block_modifiers.cc [ 57%] Generating python_shell/moc_main_thread_runner.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_main_thread_runner.cpp_parameters [ 57%] Generating python_shell/moc_output_redirector.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_output_redirector.cpp_parameters [ 57%] Generating python_shell/moc_path_completer.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_path_completer.cpp_parameters [ 57%] Generating python_shell/moc_python_completer.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_completer.cpp_parameters [ 58%] Generating python_shell/moc_python_interpreter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter.cpp_parameters [ 58%] Generating python_shell/moc_python_interpreter_worker.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter_worker.cpp_parameters [ 58%] Generating python_shell/moc_python_namespace_tree_model.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_namespace_tree_model.cpp_parameters [ 58%] Generating python_shell/moc_python_shell.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell.cpp_parameters [ 58%] Generating python_shell/moc_python_shell_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell_widget.cpp_parameters [ 58%] Generating python_shell/moc_state.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state.cpp_parameters [ 58%] Generating python_shell/moc_state_machine.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state_machine.cpp_parameters [ 58%] Generating python_shell/moc_text_logger.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_text_logger.cpp_parameters [ 58%] Generating python_shell/moc_transition.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition.cpp_parameters [ 58%] Generating python_shell/moc_transition_guard.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition_guard.cpp_parameters [ 60%] Generating scene_win/moc_context_menu.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_context_menu.cpp_parameters [ 60%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/interaction.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/interaction.cc.o -MF CMakeFiles/ost_mol_mm.dir/interaction.cc.o.d -o CMakeFiles/ost_mol_mm.dir/interaction.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/interaction.cc [ 60%] Linking CXX executable ../../../stage/bin/test_mae_standalone cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mae_standalone.dir/link.txt --verbose=1 /build/reproducible-path/openstructure-2.9.2/tools/molck/main.cc: In function 'ost::conop::CompoundLibPtr load_compound_lib(const String&)': /build/reproducible-path/openstructure-2.9.2/tools/molck/main.cc:119:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations] 119 | fs::path path_only=path_and_exe.branch_path(); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/openstructure-2.9.2/tools/molck/main.cc:3: /usr/include/boost/filesystem/path.hpp:1129:10: note: declared here 1129 | path branch_path() const { return parent_path(); } | ^~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/tools/molck/main.cc:120:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations] 120 | fs::path share_path = path_only.branch_path(); | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/boost/filesystem/path.hpp:1129:10: note: declared here 1129 | path branch_path() const { return parent_path(); } | ^~~~~~~~~~~ [ 60%] Generating scene_win/moc_current_selection_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_current_selection_node.cpp_parameters /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/test_mae_standalone.dir/link.d CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -o ../../../stage/bin/test_mae_standalone -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib ../../../stage/lib/libost_io.so.2.9.2 ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 60%] Built target test_mae_standalone [ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/simulation.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/simulation.cc.o -MF CMakeFiles/ost_mol_mm.dir/simulation.cc.o.d -o CMakeFiles/ost_mol_mm.dir/simulation.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/simulation.cc /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/lddt.cc: In function 'ost::conop::CompoundLibPtr load_compound_lib(const String&)': /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/lddt.cc:138:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations] 138 | fs::path path_only=path_and_exe.branch_path(); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/boost/filesystem/fstream.hpp:17, from /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/lddt.cc:26: /usr/include/boost/filesystem/path.hpp:1129:10: note: declared here 1129 | path branch_path() const { return parent_path(); } | ^~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/lddt.cc:139:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations] 139 | fs::path share_path = path_only.branch_path(); | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/boost/filesystem/path.hpp:1129:10: note: declared here 1129 | path branch_path() const { return parent_path(); } | ^~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/conop/src/chemdict_tool.cc: In function 'int main(int, const char**)': /build/reproducible-path/openstructure-2.9.2/modules/conop/src/chemdict_tool.cc:96:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 96 | if (boost::iequals(".gz", boost::filesystem::extension(argv[2]))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/conop/src/chemdict_tool.cc:27: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ [ 61%] Generating scene_win/moc_custom_part_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_custom_part_node.cpp_parameters [ 61%] Generating scene_win/moc_entity_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp_parameters [ 61%] Generating scene_win/moc_entity_part_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_part_node.cpp_parameters [ 61%] Generating scene_win/moc_gfx_scene_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_gfx_scene_node.cpp_parameters [ 61%] Generating scene_win/moc_label_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_label_node.cpp_parameters [ 61%] Generating scene_win/moc_render_mode_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_mode_node.cpp_parameters [ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/modeller.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/modeller.cc.o -MF CMakeFiles/ost_mol_mm.dir/modeller.cc.o.d -o CMakeFiles/ost_mol_mm.dir/modeller.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/modeller.cc [ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o -MF CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o.d -o CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/state_extractor.cc [ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/observer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/observer.cc.o -MF CMakeFiles/ost_mol_mm.dir/observer.cc.o.d -o CMakeFiles/ost_mol_mm.dir/observer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/observer.cc [ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/system_creator.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/system_creator.cc.o -MF CMakeFiles/ost_mol_mm.dir/system_creator.cc.o.d -o CMakeFiles/ost_mol_mm.dir/system_creator.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/system_creator.cc [ 61%] Generating scene_win/moc_render_modes_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_modes_node.cpp_parameters [ 61%] Generating scene_win/moc_root_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_root_node.cpp_parameters [ 61%] Generating scene_win/moc_scene_node.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_node.cpp_parameters [ 62%] Generating scene_win/moc_scene_win.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win.cpp_parameters [ 62%] Generating scene_win/moc_scene_win_model.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win_model.cpp_parameters [ 62%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o -MF CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o.d -o CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/topology_creator.cc [ 62%] Generating sequence_viewer/moc_align_properties_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_align_properties_painter.cpp_parameters [ 62%] Generating sequence_viewer/moc_alignment_view_object.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_alignment_view_object.cpp_parameters [ 62%] Generating sequence_viewer/moc_background_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_background_painter.cpp_parameters [ 62%] Generating sequence_viewer/moc_base_row.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_row.cpp_parameters [ 62%] Generating sequence_viewer/moc_base_view_object.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_view_object.cpp_parameters [ 62%] Generating sequence_viewer/moc_conservation_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_conservation_painter.cpp_parameters [ 62%] Linking CXX executable ../../../stage/bin/chemdict_tool cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdict_tool.dir/link.txt --verbose=1 [ 63%] Generating sequence_viewer/moc_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_painter.cpp_parameters /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/chemdict_tool.dir/link.d CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -o ../../../stage/bin/chemdict_tool -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_io.so.2.9.2 ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 63%] Built target chemdict_tool [ 63%] Generating sequence_viewer/moc_secstr_row.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_secstr_row.cpp_parameters [ 63%] Generating sequence_viewer/moc_seq_secstr_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_secstr_painter.cpp_parameters [ 63%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology.cc.o -MF CMakeFiles/ost_mol_mm.dir/topology.cc.o.d -o CMakeFiles/ost_mol_mm.dir/topology.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/topology.cc [ 63%] Generating sequence_viewer/moc_seq_selection_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_selection_painter.cpp_parameters [ 63%] Generating sequence_viewer/moc_seq_text_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_text_painter.cpp_parameters [ 63%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/steep.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/steep.cc.o -MF CMakeFiles/ost_mol_mm.dir/steep.cc.o.d -o CMakeFiles/ost_mol_mm.dir/steep.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/steep.cc [ 63%] Generating sequence_viewer/moc_sequence_delegate.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_delegate.cpp_parameters [ 63%] Generating sequence_viewer/moc_sequence_model.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_model.cpp_parameters [ 63%] Generating sequence_viewer/moc_sequence_row.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_row.cpp_parameters [ 63%] Generating sequence_viewer/moc_sequence_search_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_search_bar.cpp_parameters [ 63%] Linking CXX executable ../../stage/bin/molck cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tools/molck && /usr/bin/cmake -E cmake_link_script CMakeFiles/molck.dir/link.txt --verbose=1 [ 63%] Generating sequence_viewer/moc_sequence_table_view.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_table_view.cpp_parameters [ 63%] Generating sequence_viewer/moc_sequence_view_object.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp_parameters [ 63%] Generating sequence_viewer/moc_sequence_viewer.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_viewer.cpp_parameters [ 65%] Generating sequence_viewer/moc_tick_painter.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_tick_painter.cpp_parameters /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/molck.dir/link.d CMakeFiles/molck.dir/main.cc.o -o ../../stage/bin/molck -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../stage/lib/libost_io.so.2.9.2 ../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../stage/lib/libost_conop.so.2.9.2 ../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../stage/lib/libost_seq.so.2.9.2 ../../stage/lib/libost_mol.so.2.9.2 ../../stage/lib/libost_img_alg.so.2.9.2 ../../stage/lib/libost_img.so.2.9.2 ../../stage/lib/libost_info.so.2.9.2 ../../stage/lib/libost_base.so.2.9.2 ../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 65%] Built target molck [ 65%] Generating sequence_viewer/moc_title_row.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_title_row.cpp_parameters [ 65%] Generating tools/moc_measure_tool.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_measure_tool.cpp_parameters [ 65%] Linking CXX executable ../../../../stage/bin/lddt cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lddt.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/lddt.dir/link.d CMakeFiles/lddt.dir/lddt.cc.o -o ../../../../stage/bin/lddt -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_io.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 65%] Built target lddt [ 65%] Generating tools/moc_tool_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_bar.cpp_parameters [ 65%] Generating tools/moc_tool.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool.cpp_parameters [ 65%] Generating tools/moc_tool_manager.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_manager.cpp_parameters [ 65%] Generating tools/moc_tool_option.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option.cpp_parameters [ 65%] Generating tools/moc_tool_option_group.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option_group.cpp_parameters [ 65%] Generating tools/moc_tool_options.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options.cpp_parameters [ 65%] Generating tools/moc_tool_options_widget.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_widget.cpp_parameters cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_browser.cpp [ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o [ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_viewer.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_file_type_dialog.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_canvas.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o -MF CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_menu.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_win.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty_app.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_perspective.cpp.o [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_area.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_perspective.cpp.o -MF CMakeFiles/ost_gui.dir/moc_perspective.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_perspective.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_perspective.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_area.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main_area.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main_area.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main_area.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o -MF CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_dock_widget.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_window.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_window.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main_window.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main_window.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main_window.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o -MF CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_selection.cpp [ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_geom_handler.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_pool.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_widget.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_box_widget.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_log_reader.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_align_properties_painter.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_background_painter.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_row.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_conservation_painter.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_painter.cpp [ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_secstr_row.cpp [ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_secstr_painter.cpp [ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_selection_painter.cpp [ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_text_painter.cpp In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/main.hh:28, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp:10: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh: In instantiation of 'ost::gui::WidgetStateSaver::~WidgetStateSaver() [with BASE = QMainWindow]': /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/main.hh:40:25: required from here 40 | class DLLEXPORT_OST_GUI GostyMainWindow : public WidgetStateSaver | ^~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh:323:8: warning: the address of 'ost::gui::WidgetStateSaver::QMainWindow' will never be NULL [-Waddress] 323 | if(dynamic_cast(this)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver::QMainWindow' declared here 263 | class WidgetStateSaver: public BASE | ^~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_delegate.cpp [ 70%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/seq/alg/_ost_seq_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_seq_alg.dir/link.txt --verbose=1 [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_model.cpp /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_seq_alg.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/seq/alg/_ost_seq_alg.so CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./__init__.pyc\",\"__init__.py\",doraise=True)" [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_row.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/mat.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./mat.pyc\",\"mat.py\",doraise=True)" [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_search_bar.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/renumber.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./renumber.pyc\",\"renumber.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod/aaindex.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/seq/alg/./aaindex.pyc\",\"aaindex.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 70%] Built target _ost_seq_alg [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_table_view.cpp [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_viewer.cpp [ 70%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/conop/_ost_conop.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_conop.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_conop.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/conop/_ost_conop.so CMakeFiles/_ost_conop.dir/wrap_conop.cc.o CMakeFiles/_ost_conop.dir/export_compound.cc.o CMakeFiles/_ost_conop.dir/export_processor.cc.o CMakeFiles/_ost_conop.dir/export_heuristic.cc.o CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o CMakeFiles/_ost_conop.dir/export_conop.cc.o CMakeFiles/_ost_conop.dir/export_diag.cc.o CMakeFiles/_ost_conop.dir/export_rule_based.cc.o CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_conop.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/conop/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/conop/pymod/cleanup.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/conop/./cleanup.pyc\",\"cleanup.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 70%] Built target _ost_conop make -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_tick_painter.cpp [ 70%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o -MF CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o.d -o CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/wrap_gfx.cc [ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_title_row.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_alignment_view_object.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_view_object.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_main_thread_runner.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_completer_base.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_gutter.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_output_redirector.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_path_completer.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_completer.cpp [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter.cpp [ 71%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene.cc.o -MF CMakeFiles/_ost_gfx.dir/export_scene.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_scene.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_scene.cc [ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter_worker.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_namespace_tree_model.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell_widget.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_text_logger.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state_machine.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition.cpp make -f modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build.make modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build.make modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 72%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o -MF CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/wrap_mol_alg.cc [ 72%] Linking CXX shared library ../../../../stage/lib/libost_mol_mm.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/AMBER03.dat /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/forcefields/AMBER03.dat cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/CHARMM27.dat /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/forcefields/CHARMM27.dat cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_mm.dir/link.txt --verbose=1 [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition_guard.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_bar.cpp In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/../../../../../modules/gui/src/sequence_viewer/sequence_view_object.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp:10: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 72%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_svd_superpose.cc [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_drop_box.cpp [ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_manager.cpp /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_mol_mm.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol_mm.so.2.9 -o ../../../../stage/lib/libost_mol_mm.so.2.9.2 CMakeFiles/ost_mol_mm.dir/forcefield.cc.o CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o CMakeFiles/ost_mol_mm.dir/interaction.cc.o CMakeFiles/ost_mol_mm.dir/simulation.cc.o CMakeFiles/ost_mol_mm.dir/modeller.cc.o CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o CMakeFiles/ost_mol_mm.dir/observer.cc.o CMakeFiles/ost_mol_mm.dir/system_creator.cc.o CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o CMakeFiles/ost_mol_mm.dir/topology.cc.o CMakeFiles/ost_mol_mm.dir/steep.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_io.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenMM.so ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol_mm.so.2.9.2 ../../../../stage/lib/libost_mol_mm.so.2.9 ../../../../stage/lib/libost_mol_mm.so [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_bottom_bar.cpp make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 73%] Built target ost_mol_mm [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_box.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_event_button.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_widget_container.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar_widget_holder.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_side_bar.cpp [ 73%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_gfx_node.cc [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_splitter_panel_bar.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_tabbed_panel_bar.cpp [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o [ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_context_menu.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_current_selection_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_custom_part_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_gfx_scene_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_label_node.cpp [ 75%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_clash.cc [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_part_node.cpp [ 75%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_trajectory_analysis.cc [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_mode_node.cpp [ 75%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o -MF CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_symmetry_node.cc [ 75%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_gfx_obj.cc [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_modes_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_root_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_node.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win.cpp [ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win_model.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option_group.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_bar.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_manager.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_widget.cpp In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/../../../../../modules/gui/src/scene_win/entity_node.hh:28, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp:10: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_measure_tool.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_win.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_argand.cpp [ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_fft_panel.cpp [ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_info_panel.cpp [ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer.cpp [ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_manager_gui.cpp [ 77%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_entity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_entity.cc.o -MF CMakeFiles/_ost_gfx.dir/export_entity.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_entity.cc [ 77%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_structure_analysis.cc [ 77%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_contact_overlap.cc [ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer_panel_base.cpp [ 78%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_surface.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_surface.cc.o -MF CMakeFiles/_ost_gfx.dir/export_surface.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_surface.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_surface.cc [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_null_overlay.cpp [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_base.cpp [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_pointlist_overlay_base.cpp [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/thin_splitter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/thin_splitter.cc.o -MF CMakeFiles/ost_gui.dir/thin_splitter.cc.o.d -o CMakeFiles/ost_gui.dir/thin_splitter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/thin_splitter.cc [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/perspective.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/perspective.cc.o -MF CMakeFiles/ost_gui.dir/perspective.cc.o.d -o CMakeFiles/ost_gui.dir/perspective.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/perspective.cc [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_registry.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_registry.cc.o -MF CMakeFiles/ost_gui.dir/widget_registry.cc.o.d -o CMakeFiles/ost_gui.dir/widget_registry.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/widget_registry.cc [ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_browser.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_browser.cc.o -MF CMakeFiles/ost_gui.dir/file_browser.cc.o.d -o CMakeFiles/ost_gui.dir/file_browser.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_type_dialog.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_type_dialog.cc.o -MF CMakeFiles/ost_gui.dir/file_type_dialog.cc.o.d -o CMakeFiles/ost_gui.dir/file_type_dialog.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_type_dialog.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_viewer.cc.o -MF CMakeFiles/ost_gui.dir/file_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/file_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_viewer.cc [ 80%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primitives.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primitives.cc.o -MF CMakeFiles/_ost_gfx.dir/export_primitives.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_primitives.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_primitives.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main.cc.o -MF CMakeFiles/ost_gui.dir/main.cc.o.d -o CMakeFiles/ost_gui.dir/main.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main.cc [ 80%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primlist.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primlist.cc.o -MF CMakeFiles/_ost_gfx.dir/export_primlist.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_primlist.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_primlist.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gl_canvas.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gl_canvas.cc.o -MF CMakeFiles/ost_gui.dir/gl_canvas.cc.o.d -o CMakeFiles/ost_gui.dir/gl_canvas.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/gl_canvas.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/dock_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/dock_widget.cc.o -MF CMakeFiles/ost_gui.dir/dock_widget.cc.o.d -o CMakeFiles/ost_gui.dir/dock_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/dock_widget.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main_window.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main_window.cc.o -MF CMakeFiles/ost_gui.dir/main_window.cc.o.d -o CMakeFiles/ost_gui.dir/main_window.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main_window.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gl_win.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gl_win.cc.o -MF CMakeFiles/ost_gui.dir/gl_win.cc.o.d -o CMakeFiles/ost_gui.dir/gl_win.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/gl_win.cc [ 80%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o -MF CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_scene_observer.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_menu.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_menu.cc.o -MF CMakeFiles/ost_gui.dir/scene_menu.cc.o.d -o CMakeFiles/ost_gui.dir/scene_menu.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_menu.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget.cc.o -MF CMakeFiles/ost_gui.dir/widget.cc.o.d -o CMakeFiles/ost_gui.dir/widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/widget.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/admin.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/admin.cc.o -MF CMakeFiles/ost_gui.dir/admin.cc.o.d -o CMakeFiles/ost_gui.dir/admin.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/admin.cc [ 80%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_accessibility.cc [ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_pool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_pool.cc.o -MF CMakeFiles/ost_gui.dir/widget_pool.cc.o.d -o CMakeFiles/ost_gui.dir/widget_pool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/widget_pool.cc [ 80%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_sec_structure.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_widget.cc.o -MF CMakeFiles/ost_gui.dir/messages/message_widget.cc.o.d -o CMakeFiles/ost_gui.dir/messages/message_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_widget.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o -MF CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o.d -o CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_box_widget.cc [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_render_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_render_options.cc.o -MF CMakeFiles/_ost_gfx.dir/export_render_options.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_render_options.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/log_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/log_reader.cc.o -MF CMakeFiles/ost_gui.dir/messages/log_reader.cc.o.d -o CMakeFiles/ost_gui.dir/messages/log_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/log_reader.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/align_properties_painter.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/main.hh:28, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/gosty_app.hh:28, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main.cc:19: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh: In instantiation of 'ost::gui::WidgetStateSaver::~WidgetStateSaver() [with BASE = QMainWindow]': /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main.cc:70:69: required from here 70 | GostyMainWindow::GetDefaultSize(), 0) | ^ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:323:8: warning: the address of 'ost::gui::WidgetStateSaver::QMainWindow' will never be NULL [-Waddress] 323 | if(dynamic_cast(this)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver::QMainWindow' declared here 263 | class WidgetStateSaver: public BASE | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh: In instantiation of 'void ost::gui::WidgetStateSaver::set_state_() [with BASE = QMainWindow]': /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:286:5: required from 'ost::gui::WidgetStateSaver::WidgetStateSaver(const QString&, QPoint, QSize, QWidget*) [with BASE = QMainWindow]' 286 | set_state_(); | ^~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main.cc:70:69: required from here 70 | GostyMainWindow::GetDefaultSize(), 0) | ^ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:305:10: warning: the address of 'ost::gui::WidgetStateSaver::QMainWindow' will never be NULL [-Waddress] 305 | if(dynamic_cast(this)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver::QMainWindow' declared here 263 | class WidgetStateSaver: public BASE | ^~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color.cc.o -MF CMakeFiles/_ost_gfx.dir/export_color.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_color.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_color.cc [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gradient.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gradient.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gradient.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gradient.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_gradient.cc /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc: In constructor 'ost::gui::FileBrowser::FileBrowser(QWidget*)': /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc:62:13: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 62 | model_(new QDirModel), | ^~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc:53: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc: In constructor 'ost::gui::FileBrowser::FileBrowser(const QString&, QWidget*)': /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_browser.cc:102:13: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 102 | model_(new QDirModel), | ^~~~~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o -MF CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_color_ops.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_row.cc [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o -MF CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_glwin_base.cc [ 81%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_exporter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_exporter.cc.o -MF CMakeFiles/_ost_gfx.dir/export_exporter.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_exporter.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/background_painter.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/conservation_painter.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/secstr_row.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_secstr_painter.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_selection_painter.cc [ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_text_painter.cc [ 81%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_non_standard.cc [ 81%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_molck.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/secstr_row.cc:29: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_delegate.cc [ 82%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o -MF CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_bitmap.cc [ 83%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_map.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_map.cc.o -MF CMakeFiles/_ost_gfx.dir/export_map.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_map.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/export_map.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_model.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_row.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_search_bar.cc [ 83%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_membrane.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_table_view.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_viewer.cc [ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/tick_painter.cc [ 85%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_entity_to_density.cc [ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/title_row.cc [ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/alignment_view_object.cc [ 85%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_biounit.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_row.cc:29: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_model.hh:33, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_model.cc:30: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 85%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/export_gdt.cc [ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_view_object.cc [ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.cc [ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gosty_app.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gosty_app.cc.o -MF CMakeFiles/ost_gui.dir/gosty_app.cc.o.d -o CMakeFiles/ost_gui.dir/gosty_app.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/gosty_app.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main_area.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main_area.cc.o -MF CMakeFiles/ost_gui.dir/main_area.cc.o.d -o CMakeFiles/ost_gui.dir/main_area.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/main_area.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_state_saver.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_state_saver.cc.o -MF CMakeFiles/ost_gui.dir/widget_state_saver.cc.o.d -o CMakeFiles/ost_gui.dir/widget_state_saver.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/widget_state_saver.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_selection.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_selection.cc.o -MF CMakeFiles/ost_gui.dir/scene_selection.cc.o.d -o CMakeFiles/ost_gui.dir/scene_selection.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_selection.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o -MF CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o.d -o CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/widget_geom_handler.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_loader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_loader.cc.o -MF CMakeFiles/ost_gui.dir/file_loader.cc.o.d -o CMakeFiles/ost_gui.dir/file_loader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/file_loader.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.hh:30, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/alignment_view_object.hh:32, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/alignment_view_object.cc:41: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/button_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/button_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_bar.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/drop_box.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/drop_box.cc.o -MF CMakeFiles/ost_gui.dir/panels/drop_box.cc.o.d -o CMakeFiles/ost_gui.dir/panels/drop_box.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/drop_box.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/bottom_bar.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_box.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_box.cc.o -MF CMakeFiles/ost_gui.dir/panels/button_box.cc.o.d -o CMakeFiles/ost_gui.dir/panels/button_box.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_box.cc [ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/event_button.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/event_button.cc.o -MF CMakeFiles/ost_gui.dir/panels/event_button.cc.o.d -o CMakeFiles/ost_gui.dir/panels/event_button.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/event_button.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_manager.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_widget_container.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.hh:30, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.cc:32: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar_widget_holder.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/side_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/side_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/side_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/side_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/side_bar.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/splitter_panel_bar.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/tabbed_panel_bar.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option_group.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_option.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_option.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_manager.cc [ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_win.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh:31, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/gosty_app.cc:29: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh:32: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o -MF CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o.d -o CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/mouse_event.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/manipulator.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/manipulator.cc.o -MF CMakeFiles/ost_gui.dir/tools/manipulator.cc.o.d -o CMakeFiles/ost_gui.dir/tools/manipulator.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/manipulator.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_widget.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_bar.cc [ 88%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/mol/alg/_ost_mol_alg.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol_alg.dir/link.txt --verbose=1 [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/selection_tool.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/measure_tool.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/gutter.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/main_thread_runner.cc [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/output_redirector.cc In file included from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_selection.cc:28: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_selection.cc:29: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_mol_alg.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/mol/alg/_ost_mol_alg.so CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./__init__.pyc\",\"__init__.py\",doraise=True)" [ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/completer_base.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/views.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./views.pyc\",\"views.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/superpose.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./superpose.pyc\",\"superpose.py\",doraise=True)" [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/qsscoring.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./qsscoring.pyc\",\"qsscoring.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/trajectory_analysis.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./trajectory_analysis.pyc\",\"trajectory_analysis.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/structure_analysis.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./structure_analysis.pyc\",\"structure_analysis.py\",doraise=True)" [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/path_completer.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/helix_kinks.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./helix_kinks.pyc\",\"helix_kinks.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/hbond.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./hbond.pyc\",\"hbond.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/lddt.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./lddt.pyc\",\"lddt.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/qsscore.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./qsscore.pyc\",\"qsscore.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/scoring.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./scoring.pyc\",\"scoring.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/chain_mapping.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./chain_mapping.pyc\",\"chain_mapping.py\",doraise=True)" [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_context_parser.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/stereochemistry.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./stereochemistry.pyc\",\"stereochemistry.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/dockq.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./dockq.pyc\",\"dockq.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/contact_score.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./contact_score.pyc\",\"contact_score.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/ligand_scoring.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring.pyc\",\"ligand_scoring.py\",doraise=True)" [ 90%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/gfx/_ost_gfx.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/gradients.xml /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/gradients.xml cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/ligand_scoring_base.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_base.pyc\",\"ligand_scoring_base.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_gfx.dir/link.txt --verbose=1 cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/ligand_scoring_scrmsd.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_scrmsd.pyc\",\"ligand_scoring_scrmsd.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/ligand_scoring_lddtpli.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./ligand_scoring_lddtpli.pyc\",\"ligand_scoring_lddtpli.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod/bb_lddt.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/alg/./bb_lddt.pyc\",\"bb_lddt.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] Built target _ost_mol_alg make -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod/CMakeFiles/_ost_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/wrap_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/wrap_io.cc.o -MF CMakeFiles/_ost_io.dir/wrap_io.cc.o.d -o CMakeFiles/_ost_io.dir/wrap_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/wrap_io.cc [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_completer.cc /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.cc: In constructor 'ost::gui::OstDirModel::OstDirModel(QObject*)': /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.cc:31:18: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 31 | QDirModel(parent) | ^ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.hh:26, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.cc:23: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter.cc [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter_worker.cc /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_gfx.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/gfx/_ost_gfx.so CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o CMakeFiles/_ost_gfx.dir/export_scene.cc.o CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o CMakeFiles/_ost_gfx.dir/export_entity.cc.o CMakeFiles/_ost_gfx.dir/export_surface.cc.o CMakeFiles/_ost_gfx.dir/export_primitives.cc.o CMakeFiles/_ost_gfx.dir/export_primlist.cc.o CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o CMakeFiles/_ost_gfx.dir/export_render_options.cc.o CMakeFiles/_ost_gfx.dir/export_color.cc.o CMakeFiles/_ost_gfx.dir/export_gradient.cc.o CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o CMakeFiles/_ost_gfx.dir/export_exporter.cc.o CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o CMakeFiles/_ost_gfx.dir/export_map.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gfx.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gfx/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_namespace_tree_model.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod/py_gfx_obj.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gfx/./py_gfx_obj.pyc\",\"py_gfx_obj.py\",doraise=True)" [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_namespace_tree_item.cc make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] Built target _ost_gfx [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell.cc [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_widget.cc [ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_text_document_layout.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_tokenizer.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_syntax_highlighter.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/shell_history.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/string_literal_positions.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/text_logger.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state_machine.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/state.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/state.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/transition.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/transition.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition_guard.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/context_menu.cc [ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/current_selection_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/custom_part_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/label_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_part_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/gfx_scene_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_mode_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_modes_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/root_node.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.cc [ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win_model.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_part_node.cc:22: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/map_tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/map_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/map_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/map_tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/map_tool.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/map_iso.hh:33, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/context_menu.cc:31: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_node.hh:28, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/context_menu.cc:34: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/custom_part_node.cc:24: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/argand.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_mode_node.cc:21: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel_base.cc [ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_pdb_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_pdb_io.cc.o -MF CMakeFiles/_ost_io.dir/export_pdb_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_pdb_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/export_pdb_io.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/draw_overlay.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/drawing_functions.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/fft_panel.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/info_panel.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/img2qt.cc [ 93%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/mask_overlay.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/null_overlay.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_base.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win_model.cc:28: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_gui.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay.cc [ 95%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o -MF CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/export_mmcif_io.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay_base.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/strategies.cc [ 95%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/viewer_normalizer.cc [ 95%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_omf_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_omf_io.cc.o -MF CMakeFiles/_ost_io.dir/export_omf_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_omf_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/export_omf_io.cc /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.cc: In member function 'void ost::gui::SceneWin::RowsInserted(const QModelIndex&, int, int)': /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.cc:117:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 117 | model->select(parent.child(start,0),QItemSelectionModel::ClearAndSelect|QItemSelectionModel::Rows); | ~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/QModelIndex:1, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh:34, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.cc:26: /usr/include/x86_64-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ [ 95%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_map_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_map_io.cc.o -MF CMakeFiles/_ost_io.dir/export_map_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_map_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/export_map_io.cc [ 95%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_sdf_io.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_sdf_io.cc.o -MF CMakeFiles/_ost_io.dir/export_sdf_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_sdf_io.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/pymod/export_sdf_io.cc In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_modes_node.cc:25: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=] 62 | virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st); | ^~~~~ /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note: by 'ost::gfx::Entity::Apply' 294 | void Apply(const gfx::MapHandleColorOp& op, bool store=true); | ^~~~~ [ 95%] Linking CXX shared library ../../../stage/lib/libost_gui.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gui.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/ost_gui.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_gui.so.2.9 -o ../../../stage/lib/libost_gui.so.2.9.2 CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o CMakeFiles/ost_gui.dir/moc_main.cpp.o CMakeFiles/ost_gui.dir/moc_main_area.cpp.o CMakeFiles/ost_gui.dir/moc_perspective.cpp.o CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o CMakeFiles/ost_gui.dir/moc_main_window.cpp.o CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o CMakeFiles/ost_gui.dir/moc_widget.cpp.o CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o CMakeFiles/ost_gui.dir/thin_splitter.cc.o CMakeFiles/ost_gui.dir/perspective.cc.o CMakeFiles/ost_gui.dir/widget_registry.cc.o CMakeFiles/ost_gui.dir/file_browser.cc.o CMakeFiles/ost_gui.dir/file_type_dialog.cc.o CMakeFiles/ost_gui.dir/file_viewer.cc.o CMakeFiles/ost_gui.dir/main.cc.o CMakeFiles/ost_gui.dir/gl_canvas.cc.o CMakeFiles/ost_gui.dir/dock_widget.cc.o CMakeFiles/ost_gui.dir/main_window.cc.o CMakeFiles/ost_gui.dir/gl_win.cc.o CMakeFiles/ost_gui.dir/scene_menu.cc.o CMakeFiles/ost_gui.dir/widget.cc.o CMakeFiles/ost_gui.dir/admin.cc.o CMakeFiles/ost_gui.dir/widget_pool.cc.o CMakeFiles/ost_gui.dir/messages/message_widget.cc.o CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o CMakeFiles/ost_gui.dir/messages/log_reader.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o CMakeFiles/ost_gui.dir/gosty_app.cc.o CMakeFiles/ost_gui.dir/main_area.cc.o CMakeFiles/ost_gui.dir/widget_state_saver.cc.o CMakeFiles/ost_gui.dir/scene_selection.cc.o CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o CMakeFiles/ost_gui.dir/file_loader.cc.o CMakeFiles/ost_gui.dir/panels/button_bar.cc.o CMakeFiles/ost_gui.dir/panels/drop_box.cc.o CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o CMakeFiles/ost_gui.dir/panels/button_box.cc.o CMakeFiles/ost_gui.dir/panels/event_button.cc.o CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o CMakeFiles/ost_gui.dir/panels/side_bar.cc.o CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o CMakeFiles/ost_gui.dir/tools/tool_options.cc.o CMakeFiles/ost_gui.dir/tools/tool_option.cc.o CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o CMakeFiles/ost_gui.dir/tools/tool.cc.o CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o CMakeFiles/ost_gui.dir/tools/manipulator.cc.o CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o CMakeFiles/ost_gui.dir/python_shell/state.cc.o CMakeFiles/ost_gui.dir/python_shell/transition.cc.o CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o CMakeFiles/ost_gui.dir/tools/map_tool.cc.o CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.2 ../../../stage/lib/libost_io.so.2.9.2 ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libparasail.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_gui.so.2.9.2 ../../../stage/lib/libost_gui.so.2.9 ../../../stage/lib/libost_gui.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target ost_gui make -f modules/gui/src/CMakeFiles/gosty.dir/build.make modules/gui/src/CMakeFiles/gosty.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Generating moc_gosty.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty.cpp_parameters [ 95%] Generating qrc_dngr.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/rcc --name dngr --output /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/qrc_dngr.cpp /build/reproducible-path/openstructure-2.9.2/modules/gui/src/dngr.qrc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/gosty.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/src/CMakeFiles/gosty.dir/build.make modules/gui/src/CMakeFiles/gosty.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Building CXX object modules/gui/src/CMakeFiles/gosty.dir/gosty.cc.o [ 95%] Building CXX object modules/gui/src/CMakeFiles/gosty.dir/qrc_dngr.cpp.o [ 95%] Building CXX object modules/gui/src/CMakeFiles/gosty.dir/moc_gosty.cpp.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gui/src/CMakeFiles/gosty.dir/gosty.cc.o -MF CMakeFiles/gosty.dir/gosty.cc.o.d -o CMakeFiles/gosty.dir/gosty.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/src/gosty.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gui/src/CMakeFiles/gosty.dir/moc_gosty.cpp.o -MF CMakeFiles/gosty.dir/moc_gosty.cpp.o.d -o CMakeFiles/gosty.dir/moc_gosty.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty.cpp cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gui/src/CMakeFiles/gosty.dir/qrc_dngr.cpp.o -MF CMakeFiles/gosty.dir/qrc_dngr.cpp.o.d -o CMakeFiles/gosty.dir/qrc_dngr.cpp.o -c /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/qrc_dngr.cpp [ 95%] Linking CXX executable ../../../stage/lib/openstructure/libexec/gosty cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gosty.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/gosty.dir/link.d CMakeFiles/gosty.dir/gosty.cc.o CMakeFiles/gosty.dir/moc_gosty.cpp.o CMakeFiles/gosty.dir/qrc_dngr.cpp.o -o ../../../stage/lib/openstructure/libexec/gosty -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gui.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_io.so.2.9.2 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target gosty [ 96%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/io/_ost_io.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_io.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_io.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/io/_ost_io.so CMakeFiles/_ost_io.dir/wrap_io.cc.o CMakeFiles/_ost_io.dir/export_pdb_io.cc.o CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o CMakeFiles/_ost_io.dir/export_omf_io.cc.o CMakeFiles/_ost_io.dir/export_map_io.cc.o CMakeFiles/_ost_io.dir/export_sdf_io.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_io.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/io/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/io/pymod/remote.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./remote.pyc\",\"remote.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/io/pymod/repository.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/io/./repository.pyc\",\"repository.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 96%] Built target _ost_io make -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/depend make -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/_ost_gui.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/build make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_message_widget.cc.o [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_tool.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o -MF CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o.d -o CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_alignment_view.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_message_widget.cc.o -MF CMakeFiles/_ost_gui.dir/export_message_widget.cc.o.d -o CMakeFiles/_ost_gui.dir/export_message_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_message_widget.cc [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gosty.cc.o [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/wrap_gui.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_tool.cc.o -MF CMakeFiles/_ost_gui.dir/export_tool.cc.o.d -o CMakeFiles/_ost_gui.dir/export_tool.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_tool.cc [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_py_shell.cc.o [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_win.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/wrap_gui.cc.o -MF CMakeFiles/_ost_gui.dir/wrap_gui.cc.o.d -o CMakeFiles/_ost_gui.dir/wrap_gui.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/wrap_gui.cc [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_py_shell.cc.o -MF CMakeFiles/_ost_gui.dir/export_py_shell.cc.o.d -o CMakeFiles/_ost_gui.dir/export_py_shell.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_py_shell.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_forcefield.cc [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_settings.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_win.cc.o -MF CMakeFiles/_ost_gui.dir/export_gl_win.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gl_win.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_gl_win.cc [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gosty.cc.o -MF CMakeFiles/_ost_gui.dir/export_gosty.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gosty.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_gosty.cc [ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_simulation.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_openmm.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_observers.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_ff_reader.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_interaction.cc [ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_win.cc.o [ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_win.cc.o -MF CMakeFiles/_ost_gui.dir/export_scene_win.cc.o.d -o CMakeFiles/_ost_gui.dir/export_scene_win.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_scene_win.cc [ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_sequence_viewer.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_buildingblock.cc [ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o -MF CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o.d -o CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_sip_handler.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_perspective.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_perspective.cc.o -MF CMakeFiles/_ost_gui.dir/export_perspective.cc.o.d -o CMakeFiles/_ost_gui.dir/export_perspective.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_perspective.cc [ 98%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_block_modifiers.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o -MF CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o.d -o CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_scene_selection.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_main_area.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_main_area.cc.o -MF CMakeFiles/_ost_gui.dir/export_main_area.cc.o.d -o CMakeFiles/_ost_gui.dir/export_main_area.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_main_area.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_panels.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_panels.cc.o -MF CMakeFiles/_ost_gui.dir/export_panels.cc.o.d -o CMakeFiles/_ost_gui.dir/export_panels.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_panels.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o -MF CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o.d -o CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_menu_bar.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_loader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_loader.cc.o -MF CMakeFiles/_ost_gui.dir/export_file_loader.cc.o.d -o CMakeFiles/_ost_gui.dir/export_file_loader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_file_loader.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_file_viewer.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_widget.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_widget.cc.o -MF CMakeFiles/_ost_gui.dir/export_widget.cc.o.d -o CMakeFiles/_ost_gui.dir/export_widget.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_widget.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o -MF CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_gl_canvas.cc [ 98%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_topology.cc [ 98%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/export_modeller.cc [ 98%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o -MF CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/wrap_mol_mm.cc [ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o -MF CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o.d -o CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/data_viewer_proxy.cc [100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_data_viewer.cc In file included from /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_scene_selection.cc:23: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=] 55 | virtual void DeepSwap(GfxNode& n); | ^~~~~~~~ In file included from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41, from /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_scene_selection.cc:24: /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note: by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)' 58 | virtual void DeepSwap(GfxObj& go); | ^~~~~~~~ [100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay.cc.o -MF CMakeFiles/_ost_gui.dir/export_overlay.cc.o.d -o CMakeFiles/_ost_gui.dir/export_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_overlay.cc [100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.13 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o -MF CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o.d -o CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/export_overlay_manager.cc [100%] Linking CXX shared module ../../../stage/lib/python3.13/dist-packages/ost/gui/_ost_gui.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/presets.xml /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/presets.xml cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/icons/color_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/color_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/icons/preset_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/preset_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/icons/render_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/render_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/icons/tool_icon.png /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/tool_icon.png cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_gui.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_gui.dir/link.d -Wl,-z,relro -shared -o ../../../stage/lib/python3.13/dist-packages/ost/gui/_ost_gui.so CMakeFiles/_ost_gui.dir/wrap_gui.cc.o CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o CMakeFiles/_ost_gui.dir/export_message_widget.cc.o CMakeFiles/_ost_gui.dir/export_gl_win.cc.o CMakeFiles/_ost_gui.dir/export_tool.cc.o CMakeFiles/_ost_gui.dir/export_py_shell.cc.o CMakeFiles/_ost_gui.dir/export_gosty.cc.o CMakeFiles/_ost_gui.dir/export_scene_win.cc.o CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o CMakeFiles/_ost_gui.dir/export_perspective.cc.o CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o CMakeFiles/_ost_gui.dir/export_main_area.cc.o CMakeFiles/_ost_gui.dir/export_panels.cc.o CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o CMakeFiles/_ost_gui.dir/export_file_loader.cc.o CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o CMakeFiles/_ost_gui.dir/export_widget.cc.o CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o CMakeFiles/_ost_gui.dir/export_overlay.cc.o CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gui.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_io.so.2.9.2 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/color_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/color_options_widget.pyc\",\"color_options_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/color_select_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/color_select_widget.pyc\",\"color_select_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/combo_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/combo_options_widget.pyc\",\"combo_options_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/cpk_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/cpk_widget.pyc\",\"cpk_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/custom_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/custom_widget.pyc\",\"custom_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_editor_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_editor_widget.pyc\",\"gradient_editor_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_info_handler.pyc\",\"gradient_info_handler.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_list_model.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_list_model.pyc\",\"gradient_list_model.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/gradient_preset_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/gradient_preset_widget.pyc\",\"gradient_preset_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/hsc_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/hsc_widget.pyc\",\"hsc_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/immutable_gradient_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/immutable_gradient_info_handler.pyc\",\"immutable_gradient_info_handler.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/immutable_preset_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/immutable_preset_info_handler.pyc\",\"immutable_preset_info_handler.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/init_inspector.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/init_inspector.pyc\",\"init_inspector.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/inspector_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/inspector_widget.pyc\",\"inspector_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/map_level_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/map_level_widget.pyc\",\"map_level_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset.pyc\",\"preset.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/remote.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/remote.pyc\",\"remote.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_editor_list_model.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_editor_list_model.pyc\",\"preset_editor_list_model.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_editor_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_editor_widget.pyc\",\"preset_editor_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_info_handler.pyc\",\"preset_info_handler.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_list_model.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_list_model.pyc\",\"preset_list_model.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/preset_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/preset_widget.pyc\",\"preset_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_mode_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_mode_widget.pyc\",\"render_mode_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_op.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_op.pyc\",\"render_op.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/render_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/render_options_widget.pyc\",\"render_options_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/scene_observer_impl.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/scene_observer_impl.pyc\",\"scene_observer_impl.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/scene_selection_helper.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/scene_selection_helper.pyc\",\"scene_selection_helper.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/simple_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/simple_widget.pyc\",\"simple_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/sline_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/sline_widget.pyc\",\"sline_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/toolbar_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/toolbar_options_widget.pyc\",\"toolbar_options_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/trace_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/trace_widget.pyc\",\"trace_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/tube_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/tube_widget.pyc\",\"tube_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/uniform_color_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/uniform_color_widget.pyc\",\"uniform_color_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/visibility_op.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/visibility_op.pyc\",\"visibility_op.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/line_trace_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/line_trace_widget.pyc\",\"line_trace_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/wireframe_widget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/wireframe_widget.pyc\",\"wireframe_widget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/scene/query_editor.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/scene/query_editor.pyc\",\"query_editor.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/termuse.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/termuse.pyc\",\"termuse.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/superpositiondialog.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/superpositiondialog.pyc\",\"superpositiondialog.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/init.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/init.pyc\",\"init.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/dng/menu.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/dng/menu.pyc\",\"menu.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/init_context_menu.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_context_menu.pyc\",\"init_context_menu.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/init_menubar.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_menubar.pyc\",\"init_menubar.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/init_spacenav.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_spacenav.pyc\",\"init_spacenav.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/init_splash.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./init_splash.pyc\",\"init_splash.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/trajectory_viewer.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./trajectory_viewer.pyc\",\"trajectory_viewer.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/helpwidget.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./helpwidget.pyc\",\"helpwidget.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/table.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./table.pyc\",\"table.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/gui/pymod/gosty_startup.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/gui/./gosty_startup.pyc\",\"gosty_startup.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target _ost_gui make -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/depend make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/ost_scripts.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/build make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost_config cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin/ost cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different dng /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin/dng cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_startup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/ost_startup.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/scripts/dng_startup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/dng_startup.py make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_scripts [100%] Linking CXX shared module ../../../../stage/lib/python3.13/dist-packages/ost/mol/mm/_ost_mol_mm.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol_mm.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file=CMakeFiles/_ost_mol_mm.dir/link.d -Wl,-z,relro -shared -o ../../../../stage/lib/python3.13/dist-packages/ost/mol/mm/_ost_mol_mm.so CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol_mm.so.2.9.2 /usr/lib/x86_64-linux-gnu/libpython3.13.so /usr/lib/x86_64-linux-gnu/libboost_python313.so.1.83.0 ../../../../stage/lib/libost_io.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libOpenMM.so cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/mm/./__init__.pyc\",\"__init__.py\",doraise=True)" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod/antechamber.py\",\"/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/mol/mm/./antechamber.pyc\",\"antechamber.py\",doraise=True)" make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target _ost_mol_mm make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j20 check ARGS\+=--verbose ARGS\+=-j20 make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.2 -B/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.2 -B/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/CMakeFiles 94 make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_startup.py.dir/DependInfo.cmake "--color=" make -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/create_stage.dir/DependInfo.cmake "--color=" make -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_config.dir/DependInfo.cmake "--color=" make -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost.dir/DependInfo.cmake "--color=" make -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_dng.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost_startup.py.in -DOUT_FILE=ost_startup.py -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib make -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost_config.in -DOUT_FILE=ost_config -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/dng.in -DOUT_FILE=dng -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.2/scripts/ost.in -DOUT_FILE=ost -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.13.2 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.13/dist-packages/ -P /build/reproducible-path/openstructure-2.9.2/cmake_support/substitute.cmake make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin [ 0%] Built target subst_ost_startup.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 0%] Built target subst_ost_config [ 0%] Built target subst_dng make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 0%] Built target subst_ost [ 0%] Built target create_stage make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/DependInfo.cmake "--color=" make -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom_headers.dir/DependInfo.cmake "--color=" make -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config_headers.dir/DependInfo.cmake "--color=" make -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base_headers.dir/DependInfo.cmake "--color=" make -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/depend make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info_headers.dir/DependInfo.cmake "--color=" make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./alignment_opts.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./alignment_opts.hh make -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/depend make -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/DependInfo.cmake "--color=" make -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/depend make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop_headers.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/export_helper/vector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/export_helper/vector.hh make -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./clip_alignment.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./clip_alignment.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./base.hh make -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/generic_property_def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/generic_property_def.hh make -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/build make -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/depend make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db_headers.dir/DependInfo.cmake "--color=" make -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build make -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/depend make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/pointer_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/pointer_iterator.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/DependInfo.cmake "--color=" make -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./def.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./conservation.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./conservation.hh make -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_error.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./conop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./conop.hh make -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img_headers.dir/DependInfo.cmake "--color=" make -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./config.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/DependInfo.cmake "--color=" make -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/pair_to_tuple_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/pair_to_tuple_conv.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui_headers.dir/DependInfo.cmake "--color=" make -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_group.hh make -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./sqlite_wrap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_wrap.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io_headers.dir/DependInfo.cmake "--color=" make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./contact_prediction_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_prediction_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./exc.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./exc.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/DependInfo.cmake "--color=" make -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./dllexport.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./dllexport.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl.hh make -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl_fw.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./processor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./processor.hh make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/raster_image/raster_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/raster_image/raster_image.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./anisotropic.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./anisotropic.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/export_helper/vec_to_list_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/export_helper/vec_to_list_conv.hh make -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/chemdict_parser.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./sqlite_conv.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_conv.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/config/./version.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./version.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./amino_acids.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./amino_acids.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./geom.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./geom.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./forcefield.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./forcefield.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./svd_superpose.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./svd_superpose.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./diag.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./diag.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/dispatch.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/dispatch.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./distance_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./distance_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./auto_correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./auto_correlate.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/bindings/src/./wrap_tmalign.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/bindings/./wrap_tmalign.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/test_utils/compare_files.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/test_utils/compare_files.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/star_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./ff_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./ff_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat2.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./clear.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clear.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./entropy.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./entropy.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./generic_property.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./generic_property.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./sec_structure_segments.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_structure_segments.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/impl/sequence_list_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/atom_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_iso_spec.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_spec.hh [ 0%] Built target ost_config_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./clip_min_max.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clip_min_max.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./buildingblock.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./buildingblock.hh make -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./linear_indexer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./linear_indexer.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./model_check.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./model_check.hh [ 0%] Built target ost_bindings_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/map_octree.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_octree.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./global_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./global_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./conjugate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./conjugate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./integrity_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./integrity_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_info.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./heuristic.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./heuristic.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_item.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_item.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./local_dist_diff_test.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./local_dist_diff_test.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/chain_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./mat4.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat4.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./binary_container.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./binary_container.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/config/CMakeFiles/ost_config.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./ins_del.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./ins_del.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/octree_isocont.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/octree_isocont.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./convolute.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./convolute.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/chain_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./invalid_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./invalid_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/selection_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/selection_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./distance_test_common.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_test_common.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound_lib.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/io_profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/io_profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_fw.hh [ 0%] Built target ost_config cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./ptr_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./ptr_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/db/src/./extract_data_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/db/./extract_data_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./local_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./local_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cartoon_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/measure_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/measure_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./gromacs_block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./gromacs_block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./correlate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./alignment_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./alignment_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/connector_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/dcd_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./distance_rmsd_test.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_rmsd_test.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec2.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./heuristic_block_modifiers.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./heuristic_block_modifiers.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./merge_pairwise_alignments.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./merge_pairwise_alignments.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/custom_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/custom_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./log.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./log.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_option.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./cross_correlate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./cross_correlate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/connector_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./superpose_frames.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./superpose_frames.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./rule_based.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./rule_based.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./interaction.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./interaction.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_crd_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./log_sink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./log_sink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_path.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_path.hh [ 0%] Built target ost_db_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/dihedral.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/dihedral.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/cpk_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cpk_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./sequence_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./filter_clashes.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./filter_clashes.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pqr_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./density_slice.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./density_slice.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./minimal_compound_lib.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./minimal_compound_lib.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./settings.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./settings.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_def.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_def.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec4.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec4.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/entity_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./construct_cbeta.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./construct_cbeta.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/debug_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/debug_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_set.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_set.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_region.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_region.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mae_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./pair_subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./dft.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./dft.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./compound_lib_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./simulation.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./simulation.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/entity_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/manipulator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/manipulator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./clash_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./clash_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/simple_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/simple_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./dyn_cast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./dyn_cast.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_column.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_frequency_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_frequency_domain.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/fragment_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fft.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fft.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./trajectory_analysis.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./trajectory_analysis.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./info_verbose_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./info_verbose_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/conop/src/./ring_finder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/conop/./ring_finder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat2_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat2_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mmcif_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/tool_options_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./semiglobal_align.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./semiglobal_align.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./modeller.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./modeller.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/sline_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/sline_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./structure_analysis.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./structure_analysis.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./stdint.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./stdint.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./aligned_column_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/fragment_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./item_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat3_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat3_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_half_frequency_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_half_frequency_domain.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fftw_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fftw_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/mouse_event.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/mouse_event.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./sequence_identity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_identity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./stdint_msc.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./stdint_msc.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./invalid_sequence.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./invalid_sequence.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vecmat4_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat4_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_impl.hh [ 0%] Built target ost_conop_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./geom_info_conversion.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./geom_info_conversion.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/line_trace_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/line_trace_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_ast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fill.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fill.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./sequence_similarity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_similarity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/tools/map_tool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/map_tool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./pdbize.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./pdbize.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/backbone_trace.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/backbone_trace.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./state_extractor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./state_extractor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./range.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./range.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_spatial_domain.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_spatial_domain.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/info/src/./item_type_cast.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type_cast.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./circular_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./circular_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./views_from_sequences.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./views_from_sequences.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_detail.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./system_creator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./system_creator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./filter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./filter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_ast_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/align_properties_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/align_properties_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./adjacency_bitmap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./adjacency_bitmap.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src/./profile_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/./profile_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./module_config.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pdb_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fourier_filters.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fourier_filters.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./constants.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./constants.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_algorithm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./variance_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./variance_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./units.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./units.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_renderer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./topology_creator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology_creator.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian_gradient_magnitude.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_gradient_magnitude.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_writer.hh [ 0%] Built target ost_info_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/query_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/trace_renderer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./message.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./message.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./data/default_contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_contact_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/image_state_visitor_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/background_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/background_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./index.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./index.hh [ 0%] Built target ost_seq_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./contact_overlap.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./contact_overlap.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite2.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./platform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./platform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/residue_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/connect_renderer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/connect_renderer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_sdf_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/index.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/index.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/conservation_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/conservation_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite3.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/residue_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./topology.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./domain_find.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./domain_find.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./data/default_pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./string_ref.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./string_ref.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/mapped_property.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/mapped_property.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./gaussian_laplacian.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_laplacian.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/image_state/value_holder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/value_holder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/secstr_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/secstr_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./algorithm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_secstr_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_secstr_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/surface_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./circle_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./circle_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src/./steep.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./steep.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./similarity_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./similarity_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./pod_vector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./pod_vector.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./hmm_pseudo_counts.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_pseudo_counts.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/entity_renderer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_selection_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_selection_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./composite_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./composite_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./highest_peak_search_3d.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./highest_peak_search_3d.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/surface_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./accessibility.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./accessibility.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/seq_text_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_text_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite2_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2_op.hh [ 0%] Built target ost_mol_mm_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./fixed_string.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./fixed_string.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./histogram.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./histogram.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./hmm_score.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_score.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/tabulated_trig.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/tabulated_trig.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_algorithm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_algorithm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./sec_struct.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_struct.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./line_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_iterator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/torsion_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./tri_matrix.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./tri_matrix.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./nonstandard.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./nonstandard.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_delegate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_delegate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./composite3_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/impl/fast_spheres.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/fast_spheres.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/impl/torsion_impl_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src/./wrap_parasail.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./wrap_parasail.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./local_sigma_threshold.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./local_sigma_threshold.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/save_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/save_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./molck.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./molck.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./boost_filesystem_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./boost_filesystem_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./aligned_cuboid.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./aligned_cuboid.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./atom_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data_types.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data_types.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./find_membrane.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./find_membrane.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bond_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./mask_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./mask_image.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./vec_mat_predicates.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec_mat_predicates.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/base/src/./paged_array.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/./paged_array.hh [ 0%] Built target ost_seq_alg_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bond_table.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_table.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./data.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./data.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./negate.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./negate.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./entity_to_density.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./entity_to_density.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_model.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_base.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/load_surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./quat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./quat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./biounit.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./biounit.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./normalizer_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./debug.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./debug.hh [ 0%] Built target ost_base_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_search_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_search_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_msms_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src/./gdt.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./gdt.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./point_cloud.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./point_cloud.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./dllexport.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./dllexport.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./normalizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/custom_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/custom_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_table_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_table_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/geom/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/geom/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chain_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent_iterator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_iterator.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_str.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cpk_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cpk_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_linear.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_linear.hh [ 0%] Built target ost_mol_alg_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chem_class.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_class.hh [ 0%] Built target ost_geom_headers make -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/simple_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/simple_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/tick_painter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/tick_painter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_log.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_log.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./chem_type.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_type.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./extent.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./extent.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_group.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_group.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/sline_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/sline_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/title_row.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/title_row.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_source.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./norm_od.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_od.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_factory.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_factory.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/stereochemical_params_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/alignment_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/alignment_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./in_mem_coord_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./in_mem_coord_source.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./power_spectrum.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./power_spectrum.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/line_trace_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_trace_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./coord_frame.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_frame.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/mol/omf.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/mol/omf.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/base_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./randomize.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./randomize.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./editor_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/cartoon_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cartoon_render_options.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_handle_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/sequence_viewer/sequence_view_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_view_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./editor_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./mol.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./mol.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/load_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/load_map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/render_options/trace_render_options.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/trace_render_options.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./smooth_mask_image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./smooth_mask_image.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_df3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/geom/src/CMakeFiles/ost_geom.dir/build'. cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_element_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_element_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat_accumulator.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_accumulator.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/image_format.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/image_format.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/by_chain_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_chain_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/main_thread_runner.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/main_thread_runner.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./stat_min_max.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_min_max.hh [ 1%] Built target ost_geom make -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dx_handler.hh make -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base.dir/DependInfo.cmake "--color=" make -f modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/pymod/CMakeFiles/_ost_geom.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_impl.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/ost_geom_tests.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/uniform_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/uniform_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/output_redirector.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/output_redirector.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./threshold.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./threshold.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_spi_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_color_op.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_observer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer_fw.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/completer_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/completer_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transcendentals.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transcendentals.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_situs_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/entity_view_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/entity_view_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_state_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state_fw.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_property_mapper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_property_mapper.hh [ 1%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o [ 1%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o [ 1%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_composite3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/basic_gradient_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/basic_gradient_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_composite2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_mat3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_view.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/gradient_level_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_level_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transform_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_mrc_handler.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/base/src/CMakeFiles/ost_base.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/map_handle_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_transform.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dat_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./image.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./image.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./entity_visitor_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./render_pass.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_pass.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_ipl_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_mirror.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_mirror.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/dir_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/dir_model.hh [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op4.cc.o [ 3%] Built target ost_base [ 3%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op2.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_quat.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op3.cc.o [ 2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_mat2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./handle_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./handle_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./inverted_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./inverted_mask.hh make -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_mat4.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./bitmap_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./bitmap_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_op2.cc make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./alg_shift.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_shift.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_jpk_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/gutter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/gutter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_op3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_op4.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_quat.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_quat.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_quat.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_quat.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_vec2.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./ics_editor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./ics_editor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./map.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./collada_exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./collada_exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_vec3.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_vec4.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./discrete_shrink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./discrete_shrink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/path_completer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/path_completer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_nanoscope_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./not_connected_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./not_connected_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_context_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_context_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./color.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./color.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transformation_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformation_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_png_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./property_id.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./property_id.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./transformations.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformations.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./entity_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dm3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./fractional_shift.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fractional_shift.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_error.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_error.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gl_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_tiff_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_state.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./polar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./polar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/tiff_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/tiff_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_completer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_completer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./line_average.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_average.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/img/jpk_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/img/jpk_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./normalizer_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src/./rscrosscorr.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./rscrosscorr.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/sequence_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./normalizer_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./residue_view.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_view.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./null_data.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./null_data.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/fasta_io_handler.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_node_visitor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_visitor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./sec_structure.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./sec_structure.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pir_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_tokenizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_tokenizer.hh [ 3%] Built target ost_img_alg_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_syntax_highlighter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_syntax_highlighter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./spatial_organizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./spatial_organizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/promod_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/text_logger.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/text_logger.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/profile_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_object_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/hhm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_interpreter_worker.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter_worker.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_builder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_builder.hh [ 3%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_transform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pssm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_prim.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_prim.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_transform.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_transform.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_transform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_transform.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./builder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./builder.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./observable.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./observable.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/python_shell_text_document_layout.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_text_document_layout.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./symmetry_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./symmetry_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/clustal_io_handler.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/info/src/CMakeFiles/ost_info.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/shell_history.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/shell_history.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./paste_impl.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./paste_impl.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gfx_test_object.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_test_object.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_handle.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/geom/pymod/CMakeFiles/_ost_geom.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state_machine.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state_machine.hh [ 4%] Built target ost_info cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./glwin_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glwin_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./peak.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./peak.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/load.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/load.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./surface_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./input.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./input.hh [ 6%] Built target _ost_geom make -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/state.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/_ost_base.dir/DependInfo.cmake "--color=" [ 7%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/tests.cc.o -MF CMakeFiles/ost_geom_tests.dir/tests.cc.o.d -o CMakeFiles/ost_geom_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/tests.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/seq/save.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/seq/save.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./torsion_handle.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./torsion_handle.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./prim_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./prim_list.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./binary_data_sink.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_sink.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./phase.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./phase.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./transfer_connectivity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./transfer_connectivity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./scene.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./physical_units.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./physical_units.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./query_view_wrapper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_view_wrapper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./binary_data_source.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_source.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./selection.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./selection.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./pixel_sampling.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./pixel_sampling.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/python_shell/transition_guard.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition_guard.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_type_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_type_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./point_list.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./point_list.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./texture.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./texture.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./container_serialization.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./container_serialization.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./point.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./point.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./polygon_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./polygon_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./xcs_editor.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./xcs_editor.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./swap_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./swap_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./progress.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./progress.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./bounding_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./bounding_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_utils.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_utils.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./size.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./size.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./io_exception.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_exception.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./vertex_array.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/base/pymod/CMakeFiles/_ost_base.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./spherical_mask.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./spherical_mask.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./transform.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./transform.hh [ 7%] Built target _ost_base cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./vertex_array_helper.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array_helper.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./convert.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./convert.hh make -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/info/pymod/CMakeFiles/_ost_info.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/drop_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/drop_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./scene_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene_observer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./converting_streams.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./converting_streams.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./util.cc /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./util.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gl_include.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_include.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./formatted_line.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./formatted_line.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./util.hh [ 7%] Built target ost_mol_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/bottom_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/bottom_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./glext_include.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glext_include.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./chemdict_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./value_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./value_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./render_mode.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_mode.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/button_box.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_box.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./vecmat.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./vecmat.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/star_parser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./star_parser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./material.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./material.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/event_button.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/event_button.hh make -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/img/base/src/./mask_info_convert.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_info_convert.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/star_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./star_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gradient.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_widget_container.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_widget_container.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/panel_bar_widget_holder.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar_widget_holder.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gradient_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient_manager.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/side_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/side_bar.hh [ 7%] Built target ost_img_headers make -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/depend make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/splitter_panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/splitter_panel_bar.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./module_config.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_reader.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img.dir/DependInfo.cmake "--color=" make -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/panels/tabbed_panel_bar.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/tabbed_panel_bar.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/info/pymod/CMakeFiles/_ost_info.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./primitives.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./primitives.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_info.hh [ 7%] Built target _ost_info cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./povray_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/context_menu.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/context_menu.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./povray.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/io_profile.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./io_profile.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/current_selection_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/current_selection_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./dcd_io.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/custom_part_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/custom_part_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./exporter_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./gost_exporter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gost_exporter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_handle_color_op.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_iso.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_crd_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_slab.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_slab.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/entity_part_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_part_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pqr_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gfx/src/./map_iso_prop.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso_prop.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/gfx_scene_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/gfx_scene_node.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/label_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/label_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mae_handler.hh [ 7%] Built target ost_gfx_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/root_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/root_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mmcif_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_mode_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_mode_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/render_modes_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_modes_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_node.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pdb_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/scene_win/scene_win_model.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/message_box_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_box_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_sdf_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/messages/log_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/log_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/argand.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/argand.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_reader.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_writer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/data_viewer_panel_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/save_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./save_entity.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/draw_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/draw_overlay.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/img/base/src/CMakeFiles/ost_img.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/drawing_functions.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/drawing_functions.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/load_entity.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_entity.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/fft_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/fft_panel.hh [ 10%] Built target ost_img make -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/depend make -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/info_panel.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/info_panel.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/pymod/CMakeFiles/_ost_img.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/load_surface.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_surface.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/img2qt.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/img2qt.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_msms_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/mask_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/mask_overlay.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/null_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/null_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_str.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/base/src/CMakeFiles/ost_mol.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_base_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_str.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager.hh [ 15%] Built target ost_mol make -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq.dir/DependInfo.cmake "--color=" make -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/depend make -f modules/base/tests/CMakeFiles/ost_base_tests.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./stereochemical_params_reader.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_fw.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/ost_base_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_gui.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_gui.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/tests/CMakeFiles/ost_base_tests.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./mol/omf.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./omf.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/overlay_manager_observer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_observer.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/img/base/pymod/CMakeFiles/_ost_img.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 15%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o -MF CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_generic_property.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./sequence_io_handler.hh [ 17%] Built target _ost_img cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/pointlist_overlay_base.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay_base.hh [ 17%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./fasta_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o -MF CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_string_ref.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/strategies.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/strategies_fw.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies_fw.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pir_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/data_viewer/viewer_normalizer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/viewer_normalizer.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./promod_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_browser.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_browser.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./profile_io_handler.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_type_dialog.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_type_dialog.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_viewer.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_viewer.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/seq/base/src/CMakeFiles/ost_seq.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gl_canvas.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_canvas.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./hhm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gl_win.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_win.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./scene_menu.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_menu.hh [ 18%] Built target ost_seq cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./pssm_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./gosty_app.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./gosty_app.hh make -f modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./admin.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./admin.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./clustal_io_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./module_config.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./module_config.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/load.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main_area.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_area.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./perspective.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./perspective.hh [ 18%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_atom_groups.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./scene_selection.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_selection.hh [ 22%] Built target ost_img_alg cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./seq/save.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./save.hh make -f modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./main_window.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_window.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./thin_splitter.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./thin_splitter.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_geom_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_geom_handler.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_pool.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_pool.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/load_map.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./load_map.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_registry.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_registry.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./widget_state_saver.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_state_saver.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/gui/src/./file_loader.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_loader.hh [ 22%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_sequence.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_df3_handler.hh [ 22%] Built target ost_gui_headers cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/image_format.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./image_format.hh [ 22%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_aligned_column.cc cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dx_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_spi_handler.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_situs_handler.hh make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_handler.hh [ 24%] Built target _ost_mol make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_mrc_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dat_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_ipl_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_jpk_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_nanoscope_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_png_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dm3_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_tiff_handler.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/tiff_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./tiff_util.hh cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/modules/io/src/./img/jpk_util.hh /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/io/./jpk_util.hh make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 24%] Built target ost_io_headers make -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 26%] Built target ost_seq_alg make -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 26%] Built target _ost_seq make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/build make -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/db/src/CMakeFiles/ost_db.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 27%] Built target ost_db [ 27%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_aligned_region.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Built target _ost_img_alg make -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/bindings/src/CMakeFiles/ost_bindings.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Built target ost_bindings make -f modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests/CMakeFiles/ost_img_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_data.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_data.cc.o -MF CMakeFiles/ost_img_tests.dir/test_data.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_data.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_data.cc [ 28%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_extent.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_extent.cc.o -MF CMakeFiles/ost_img_tests.dir/test_extent.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_extent.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_extent.cc [ 28%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_image.cc make -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 28%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_clear.cc [ 28%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image_state.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image_state.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_image_state.cc make -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/depend [ 28%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_chain.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_chain.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_chain.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_chain.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 29%] Built target _ost_seq_alg make -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop.dir/DependInfo.cmake "--color=" [ 29%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_conj.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/conop/src/CMakeFiles/ost_conop.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 31%] Built target ost_conop make -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/pymod/CMakeFiles/_ost_db.dir/DependInfo.cmake "--color=" [ 31%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_image_state_visitor.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/db/pymod/CMakeFiles/_ost_db.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 32%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_alignment.cc [ 32%] Built target _ost_db make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 35%] Built target ost_mol_alg make -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 35%] Built target _ost_bindings make -f modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/ost_conop_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 35%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_amino_acids.cc [ 35%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_profile.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_profile.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_profile.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_profile.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_profile.cc [ 35%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_heuristic_conop.cc [ 35%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/tests.cc.o -MF CMakeFiles/ost_conop_tests.dir/tests.cc.o.d -o CMakeFiles/ost_conop_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/tests.cc [ 35%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_index.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_index.cc.o -MF CMakeFiles/ost_img_tests.dir/test_index.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_index.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_index.cc [ 35%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o -MF CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_pod_vector.cc [ 35%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_convolute.cc [ 35%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/tests.cc.o -MF CMakeFiles/ost_base_tests.dir/tests.cc.o.d -o CMakeFiles/ost_base_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/base/tests/tests.cc [ 35%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_rule_based_conop.cc [ 35%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_point.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_point.cc.o -MF CMakeFiles/ost_img_tests.dir/test_point.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_point.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_point.cc [ 35%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/tests.cc.o -MF CMakeFiles/ost_seq_tests.dir/tests.cc.o.d -o CMakeFiles/ost_seq_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/tests.cc [ 35%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_sampling.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_sampling.cc.o -MF CMakeFiles/ost_img_tests.dir/test_sampling.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_sampling.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_sampling.cc [ 35%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_discrete_shrink.cc [ 35%] Linking CXX executable ../../../tests/ost_geom_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_geom_tests.dir/link.txt --verbose=1 [ 35%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_conn.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_conn.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_conn.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_conn.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_conn.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_geom_tests.dir/link.d CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o CMakeFiles/ost_geom_tests.dir/test_op2.cc.o CMakeFiles/ost_geom_tests.dir/test_op3.cc.o CMakeFiles/ost_geom_tests.dir/test_op4.cc.o CMakeFiles/ost_geom_tests.dir/test_quat.cc.o CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o CMakeFiles/ost_geom_tests.dir/test_transform.cc.o CMakeFiles/ost_geom_tests.dir/tests.cc.o -o ../../../tests/ost_geom_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 35%] Built target ost_geom_tests make -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx.dir/DependInfo.cmake "--color=" [ 35%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_domains.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_domains.cc.o -MF CMakeFiles/ost_img_tests.dir/test_domains.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_domains.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_domains.cc [ 36%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_size.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_size.cc.o -MF CMakeFiles/ost_img_tests.dir/test_size.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_size.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_size.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/gfx/src/CMakeFiles/ost_gfx.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 42%] Built target ost_gfx make -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/_ost_conop.dir/DependInfo.cmake "--color=" [ 42%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_fft.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/conop/pymod/CMakeFiles/_ost_conop.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 43%] Built target _ost_conop make -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/io/src/CMakeFiles/ost_io.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 48%] Built target ost_io make -f modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build.make modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build.make modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Built target _ost_mol_alg make -f modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] running checks for module geom cd /build/reproducible-path/openstructure-2.9.2/modules/geom/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_geom_tests [ 50%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/helper.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/helper.cc.o -MF CMakeFiles/ost_conop_tests.dir/helper.cc.o.d -o CMakeFiles/ost_conop_tests.dir/helper.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/helper.cc Running 25 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Built target ost_geom_tests_run make -f modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 50%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/tests.cc.o -MF CMakeFiles/ost_gfx_tests.dir/tests.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests/tests.cc [ 50%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_fill.cc [ 51%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_filter.cc [ 51%] Linking CXX executable ../../../tests/ost_base_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_base_tests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_base_tests.dir/link.d CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o CMakeFiles/ost_base_tests.dir/tests.cc.o -o ../../../tests/ost_base_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 51%] Built target ost_base_tests make -f modules/io/tests/CMakeFiles/ost_io_tests.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/ost_io_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/tests/CMakeFiles/ost_io_tests.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 51%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o -MF CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/test_value_holder.cc [ 51%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_clustal.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_clustal.cc.o -MF CMakeFiles/ost_io_tests.dir/test_clustal.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_clustal.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_clustal.cc [ 51%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/tests.cc.o -MF CMakeFiles/ost_img_tests.dir/tests.cc.o.d -o CMakeFiles/ost_img_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests/tests.cc [ 51%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests/test_gfx_node.cc [ 51%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_color.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_color.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_color.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_color.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests/test_color.cc [ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_coord_group.cc [ 52%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_histogram.cc [ 52%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_mirror.cc [ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_builder.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_builder.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_builder.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_builder.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_builder.cc [ 52%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_negate.cc [ 52%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_power_spectrum.cc [ 52%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_shift.cc [ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_delete.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_delete.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_delete.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_delete.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_delete.cc make -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 52%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_superposition.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_superposition.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/test_superposition.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/test_superposition.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_superposition.cc [ 52%] Linking CXX executable ../../../../tests/ost_img_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img_tests.dir/link.txt --verbose=1 make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/DependInfo.cmake "--color=" [ 52%] Linking CXX executable ../../../../tests/ost_seq_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_tests.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 53%] Built target ost_mol_mm make -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 53%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_distance_analysis.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_seq_tests.dir/link.d CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o CMakeFiles/ost_seq_tests.dir/test_profile.cc.o CMakeFiles/ost_seq_tests.dir/tests.cc.o -o ../../../../tests/ost_seq_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_seq.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_img_tests.dir/link.d CMakeFiles/ost_img_tests.dir/test_data.cc.o CMakeFiles/ost_img_tests.dir/test_extent.cc.o CMakeFiles/ost_img_tests.dir/test_image.cc.o CMakeFiles/ost_img_tests.dir/test_image_state.cc.o CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o CMakeFiles/ost_img_tests.dir/test_index.cc.o CMakeFiles/ost_img_tests.dir/test_point.cc.o CMakeFiles/ost_img_tests.dir/test_sampling.cc.o CMakeFiles/ost_img_tests.dir/test_domains.cc.o CMakeFiles/ost_img_tests.dir/test_size.cc.o CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o CMakeFiles/ost_img_tests.dir/tests.cc.o -o ../../../../tests/ost_img_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 53%] Built target ost_seq_tests make -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/DependInfo.cmake "--color=" [ 53%] Built target ost_img_tests make -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 55%] Built target _ost_gfx make -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/pymod/CMakeFiles/_ost_io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/io/pymod/CMakeFiles/_ost_io.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 56%] Built target _ost_io make -f modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/ost_base_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 56%] running checks for module base cd /build/reproducible-path/openstructure-2.9.2/modules/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_base_tests Running 5 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 56%] Built target ost_base_tests_run make -f modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 56%] running checks for module img cd /build/reproducible-path/openstructure-2.9.2/modules/img/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_img_tests Running 44 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 56%] Built target ost_img_tests_run [ 56%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_merge_pairwise_alignments.cc [ 56%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_pdb.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/build [ 56%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_entity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_entity.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_entity.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_entity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc In file included from /usr/include/c++/14/string:54, from /usr/include/boost/test/utils/basic_cstring/bcs_char_traits.hpp:25, from /usr/include/boost/test/utils/basic_cstring/basic_cstring.hpp:21, from /usr/include/boost/test/detail/global_typedef.hpp:15, from /usr/include/boost/test/tools/detail/print_helper.hpp:20, from /usr/include/boost/test/utils/lazy_ostream.hpp:16, from /usr/include/boost/test/tools/context.hpp:19, from /usr/include/boost/test/test_tools.hpp:42, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:23: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:114:18: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:25: /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/string:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:114:18: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:114:18: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_chain.cc:114:18: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/gui/src/CMakeFiles/ost_gui.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 87%] Built target ost_gui make -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 87%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_interaction.cc [ 87%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_stat.cc [ 87%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_transform.cc [ 87%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/test_normalizer.cc [ 87%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_sequence_identity.cc [ 87%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests/tests.cc [ 87%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests/test_map_octree.cc [ 87%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_ics.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_ics.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_ics.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_ics.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_ics.cc [ 87%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/tests.cc [ 87%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_query.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_query.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_query.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_query.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_query.cc [ 87%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_crd.cc [ 87%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_block.cc [ 87%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_surface.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_surface.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_surface.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_surface.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_surface.cc [ 87%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/tests.cc [ 88%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_consistency_checks.cc [ 88%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_residue.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_residue.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_residue.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_residue.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_residue.cc [ 88%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_partial_sec_struct_assignment.cc [ 88%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_view.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_view.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_view.cc [ 88%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_dcd.cc [ 88%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_sdf.cc [ 88%] Linking CXX executable ../../../../tests/ost_img_alg_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img_alg_tests.dir/link.txt --verbose=1 [ 88%] Linking CXX executable ../../../tests/ost_conop_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_conop_tests.dir/link.txt --verbose=1 [ 88%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_sdf_v3000.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_img_alg_tests.dir/link.d CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o CMakeFiles/ost_img_alg_tests.dir/tests.cc.o -o ../../../../tests/ost_img_alg_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_conop_tests.dir/link.d CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o CMakeFiles/ost_conop_tests.dir/tests.cc.o CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o CMakeFiles/ost_conop_tests.dir/helper.cc.o -o ../../../tests/ost_conop_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 88%] Built target ost_img_alg_tests [ 88%] Built target ost_conop_tests make -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/DependInfo.cmake "--color=" [ 88%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_sequence_profile.cc make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 89%] Built target _ost_mol_mm [ 90%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_pir.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_pir.cc.o -MF CMakeFiles/ost_io_tests.dir/test_pir.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_pir.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_pir.cc [ 90%] Linking CXX executable ../../../tests/ost_gfx_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gfx_tests.dir/link.txt --verbose=1 [ 90%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o -MF CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_iomanager.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_gfx_tests.dir/link.d CMakeFiles/ost_gfx_tests.dir/tests.cc.o CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o CMakeFiles/ost_gfx_tests.dir/test_color.cc.o CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -o ../../../tests/ost_gfx_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.2 ../../../stage/lib/libost_io.so.2.9.2 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libparasail.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] Built target ost_gfx_tests make -f modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] running checks for module seq cd /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_seq_tests Running 32 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 90%] Built target ost_seq_tests_run make -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/_ost_gui.dir/DependInfo.cmake "--color=" [ 90%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_transfer_connectivity.cc [ 90%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/tests.cc.o -MF CMakeFiles/ost_io_tests.dir/tests.cc.o.d -o CMakeFiles/ost_io_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/tests.cc [ 90%] Linking CXX executable ../../../../tests/ost_seq_alg_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_alg_tests.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'modules/gui/pymod/CMakeFiles/_ost_gui.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 92%] Built target _ost_gui make -f modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 92%] running checks for module conop cd /build/reproducible-path/openstructure-2.9.2/modules/conop/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_conop_tests Running 18 test cases... unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' In file included from /usr/include/c++/14/string:54, from /usr/include/boost/test/utils/basic_cstring/bcs_char_traits.hpp:25, from /usr/include/boost/test/utils/basic_cstring/basic_cstring.hpp:21, from /usr/include/boost/test/detail/global_typedef.hpp:15, from /usr/include/boost/test/tools/detail/print_helper.hpp:20, from /usr/include/boost/test/utils/lazy_ostream.hpp:16, from /usr/include/boost/test/tools/context.hpp:19, from /usr/include/boost/test/test_tools.hpp:42, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:24: In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:436:20: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26, from /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22, from /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:27: /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In file included from /usr/include/c++/14/string:42: In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:436:20: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:436:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38, inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:436:20: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ [ 92%] Built target ost_conop_tests_run make -f modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 92%] running checks for module gfx cd /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_gfx_tests Running 13 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 92%] Built target ost_gfx_tests_run make -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] running checks for module img_alg cd /build/reproducible-path/openstructure-2.9.2/modules/img/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_img_alg_tests Running 25 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] Built target ost_img_alg_tests_run [ 93%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_view_op.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_seq_alg_tests.dir/link.d CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -o ../../../../tests/ost_seq_alg_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_io.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] Built target ost_seq_alg_tests make -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts/CMakeFiles/ost_scripts.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_config /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost_config cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin/ost cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different dng /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/bin/dng cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_startup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/ost_startup.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.2/scripts/dng_startup.py /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages//ost/dng_startup.py make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] Built target ost_scripts make -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] running checks for module seq_alg cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_seq_alg_tests Running 19 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] Built target ost_seq_alg_tests_run make -f modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 93%] running checks test_renumber.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_renumber.py" Compound library not available. Some functionality may not work as expected. [ 93%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o -MF CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_star_parser.cc [ 94%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/tests.cc.o -MF CMakeFiles/ost_mol_tests.dir/tests.cc.o.d -o CMakeFiles/ost_mol_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/tests.cc ........ ---------------------------------------------------------------------- Ran 8 tests in 0.321s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 94%] Built target test_renumber.py_run make -f modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 94%] running checks test_local_align.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_local_align.py" Compound library not available. Some functionality may not work as expected. [ 94%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o -MF CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_mmcif_reader.cc ... ---------------------------------------------------------------------- Ran 3 tests in 0.011s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 94%] Built target test_local_align.py_run make -f modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 94%] running checks test_global_align.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_global_align.py" Compound library not available. Some functionality may not work as expected. [ 95%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_block_modifiers.cc ... ---------------------------------------------------------------------- Ran 3 tests in 0.008s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target test_global_align.py_run make -f modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] running checks test_semiglobal_align.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_semiglobal_align.py" Compound library not available. Some functionality may not work as expected. . ---------------------------------------------------------------------- Ran 1 test in 0.003s OK [ 95%] Linking CXX executable ../../../../tests/ost_mol_alg_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_alg_tests.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target test_semiglobal_align.py_run make -f modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/DependInfo.cmake "--color=" In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:904:15, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:140:19: /usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] 1084 | { return _M_string_length; } | ^~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In static member function 'static constexpr void std::char_traits::assign(char_type&, const char_type&)', inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:433:23, inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/14/bits/basic_string.h:882:18, inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:140:19: /usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits::char_type*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized] 350 | __c1 = __c2; | ^~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:140:19: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string]' at /usr/include/boost/variant/variant.hpp:597:21, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step, std::__cxx11::basic_string, boost::mpl::l_item, float, boost::mpl::l_item, int, boost::mpl::l_item, bool, boost::mpl::l_item, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from 'static typename Visitor::result_type boost::variant::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48, inlined from 'typename Visitor::result_type boost::variant::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43, inlined from 'void boost::variant::variant_assign(boost::variant&&) [with T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27, inlined from 'void boost::variant::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10, inlined from 'typename boost::enable_if >, boost::detail::variant::is_variant_constructible_from::is_recursive_, boost::mpl::transform::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type, boost::mpl::protect > > >, boost::mpl::identity::is_sequence_based_, typename boost::mpl::eval_if::is_recursive_, T0_, boost::mpl::identity >::type, boost::detail::variant::make_variant_list::is_recursive_, T0_, boost::mpl::identity >::type, TN ...> >::type> >::type, boost::mpl::protect > >::type> >, boost::variant&>::type boost::variant::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15, inlined from 'void ost::GenericPropContainer::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38, inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_entity.cc:140:19: /usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string, std::allocator >*)((char*)&temp + offsetof(boost::variant, std::allocator >, float, int, bool, geom::Vec3>,boost::variant, std::allocator >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string::.std::__cxx11::basic_string::::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized] 905 | _M_capacity(__str._M_allocated_capacity); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()': /usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here 2107 | variant temp(rhs); | ^~~~ make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] running checks test_weight_matrix.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_weight_matrix.py" make -f modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] running checks test_alignment_from_chain_view.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_alignment_from_chain_view.py" Compound library not available. Some functionality may not work as expected. Compound library not available. Some functionality may not work as expected. . ---------------------------------------------------------------------- Ran 1 test in 0.005s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target test_alignment_from_chain_view.py_run make -f modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] running checks test_aaindex.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/alg/tests/test_aaindex.py" Compound library not available. Some functionality may not work as expected. /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_mol_alg_tests.dir/link.d CMakeFiles/ost_mol_alg_tests.dir/test_superposition.cc.o CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o -o ../../../../tests/ost_mol_alg_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_io.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target ost_mol_alg_tests make -f modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build.make modules/base/tests/CMakeFiles/test_stutil.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_stutil.py_run.dir/DependInfo.cmake "--color=" .. ---------------------------------------------------------------------- Ran 2 tests in 0.009s OK . ---------------------------------------------------------------------- Ran 1 test in 0.282s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build.make modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] running checks test_stutil.py cd /build/reproducible-path/openstructure-2.9.2/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_stutil.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 95%] Built target test_aaindex.py_run make -f modules/base/tests/CMakeFiles/test_table.py_run.dir/build.make modules/base/tests/CMakeFiles/test_table.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_table.py_run.dir/DependInfo.cmake "--color=" [ 95%] Built target test_weight_matrix.py_run make -f modules/base/tests/CMakeFiles/test_log.py_run.dir/build.make modules/base/tests/CMakeFiles/test_log.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_log.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/tests/CMakeFiles/test_table.py_run.dir/build.make modules/base/tests/CMakeFiles/test_table.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 95%] running checks test_table.py cd /build/reproducible-path/openstructure-2.9.2/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_table.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/base/tests/CMakeFiles/test_log.py_run.dir/build.make modules/base/tests/CMakeFiles/test_log.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' ...... ---------------------------------------------------------------------- Ran 6 tests in 0.002s OK [ 96%] running checks test_log.py cd /build/reproducible-path/openstructure-2.9.2/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/base/tests/test_log.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 96%] Built target test_stutil.py_run make -f modules/bindings/tests/CMakeFiles/test_msms.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_msms.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_msms.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_msms.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_msms.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 96%] running checks test_msms.py Compound library not available. Some functionality may not work as expected. cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_msms.py" [ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o -MF CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_mmcif_writer.cc .... ---------------------------------------------------------------------- Ran 4 tests in 0.007s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 96%] Built target test_log.py_run make -f modules/bindings/tests/CMakeFiles/test_clustalw.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_clustalw.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_clustalw.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_clustalw.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_clustalw.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] running checks test_clustalw.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_clustalw.py" Compound library not available. Some functionality may not work as expected. Could not find msms executable: ignoring unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o [ 97%] Built target test_msms.py_run make -f modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/depend cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o -MF CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_mmcif_info.cc make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] running checks test_hhblits.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_hhblits.py" Compound library not available. Some functionality may not work as expected. No HHblits installation found: skip unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Built target test_hhblits.py_run make -f modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .s[ 97%] running checks test_blast.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_blast.py" /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_blast.py:81: SyntaxWarning: invalid escape sequence '\d' re_v = re.compile('\d+\.\d+\.\d+') .Compound library not available. Some functionality may not work as expected. ....../build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ost/table.py:2696: DeprecationWarning: `trapz` is deprecated. Use `trapezoid` instead, or one of the numerical integration functions in `scipy.integrate`. return np.trapz(enr[1], enr[0]) ../build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ost/table.py:2807: DeprecationWarning: `trapz` is deprecated. Use `trapezoid` instead, or one of the numerical integration functions in `scipy.integrate`. return np.trapz(roc[1], roc[0]) .................Could not find blast executable: ignoring unit tests [ 97%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_topology.cc .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .[ 97%] Built target test_blast.py_run make -f modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/DependInfo.cmake "--color=" ---------------------------------------------------------------------- Ran 7 tests in 2.105s OK (skipped=1) make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o [ 97%] running checks test_kclust.py cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_forcefield.cc cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_kclust.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Built target test_clustalw.py_run make -f modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] running checks test_naccess.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_naccess.py" Compound library not available. Some functionality may not work as expected. Could not find NACCESS, could not test binding... Could not find kClust executable: ignoring unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_simulation.cc [ 97%] Built target test_naccess.py_run make -f modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Built target test_kclust.py_run make -f modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/DependInfo.cmake "--color=" [ 97%] running checks test_cadscore.py make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_cadscore.py" make -f modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] running checks test_tmtools.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_tmtools.py" Compound library not available. Some functionality may not work as expected. Compound library not available. Some functionality may not work as expected. ...../build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ost/table.py:2807: DeprecationWarning: `trapz` is deprecated. Use `trapezoid` instead, or one of the numerical integration functions in `scipy.integrate`. return np.trapz(roc[1], roc[0]) ..........s./usr/lib/python3.13/unittest/case.py:606: ResourceWarning: unclosed file <_io.BufferedReader name='testfiles/enrichment-out.png'> if method() is not None: ResourceWarning: Enable tracemalloc to get the object allocation traceback ... ---------------------------------------------------------------------- Ran 3 tests in 1.094s OK Could not find tmalign executable: ignoring unit tests Could not find tmalign executable: ignoring unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 97%] Built target test_tmtools.py_run make -f modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_ialign.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_ialign.py" [ 98%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_img.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_img.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_img.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_img.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_img.cc .Compound library not available. Some functionality may not work as expected. /usr/lib/python3.13/unittest/case.py:606: ResourceWarning: unclosed file <_io.BufferedReader name='testfiles/roc-out.png'> if method() is not None: ResourceWarning: Enable tracemalloc to get the object allocation traceback .. ---------------------------------------------------------------------- Ran 1 test in 0.126s OK Could not find ialign master perl script: ignoring unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_ialign.py_run /usr/lib/python3.13/unittest/case.py:606: ResourceWarning: unclosed file <_io.BufferedReader name='testfiles/roc-same-val-out.png'> if method() is not None: ResourceWarning: Enable tracemalloc to get the object allocation traceback ..............[ 98%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o -MF CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_exceptions.cc ............................ ---------------------------------------------------------------------- Ran 83 tests in 7.585s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_table.py_run make -f modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_lga.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_lga.py" Compound library not available. Some functionality may not work as expected. [ 98%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/tests.cc . ---------------------------------------------------------------------- Ran 1 test in 0.152s OK Could not find lga executable: ignoring unit tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_lga.py_run make -f modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_hbplus.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_hbplus.py" make -f modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_dockq.py cd /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/bindings/tests/test_dockq.py" Compound library not available. Some functionality may not work as expected. Could not find hbplus, could not test binding... make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_hbplus.py_run make -f modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_processor.py_run.dir/depend Could not find DockQ.py, could not test binding... make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/test_processor.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_processor.py cd /build/reproducible-path/openstructure-2.9.2/modules/conop/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_processor.py" [ 98%] Built target test_dockq.py_run make -f modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_complib.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/test_complib.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 98%] running checks test_complib.py cd /build/reproducible-path/openstructure-2.9.2/modules/conop/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_complib.py" Compound library not available. Some functionality may not work as expected. . ---------------------------------------------------------------------- Ran 1 test in 0.007s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_processor.py_run make -f modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build.make modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/db/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/DependInfo.cmake "--color=" make -f modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build.make modules/geom/tests/CMakeFiles/test_geom.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/test_geom.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build.make modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_linear_db.py make -f modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build.make modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build cd /build/reproducible-path/openstructure-2.9.2/modules/db/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/db/tests/test_linear_db.py" make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_geom.py cd /build/reproducible-path/openstructure-2.9.2/modules/geom/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/geom/tests/test_geom.py" Compound library not available. Some functionality may not work as expected. Compound library not available. Some functionality may not work as expected. ........ ---------------------------------------------------------------------- Ran 8 tests in 0.010s OK ../build/reproducible-path/openstructure-2.9.2/modules/conop/tests/test_complib.py:71: UserWarning: Compound library not available. Some functionality may not work as expected. warnings.warn("Compound library not available. Some functionality may not work as expected.") .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' ... ---------------------------------------------------------------------- Ran 3 tests in 0.009s OK [ 98%] Built target test_geom.py_run make -f modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build.make modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build.make modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .[ 98%] Built target test_linear_db.py_run make -f modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/DependInfo.cmake "--color=" [ 98%] running checks test_gfx.py cd /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/gfx/tests/test_gfx.py" .... ---------------------------------------------------------------------- Ran 8 tests in 1.484s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_io_pdb.py [ 98%] Built target test_complib.py_run make -f modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/depend cd /build/reproducible-path/openstructure-2.9.2/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_pdb.py" make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build Compound library not available. Some functionality may not work as expected. make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_io_mmcif.py cd /build/reproducible-path/openstructure-2.9.2/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_mmcif.py" Compound library not available. Some functionality may not work as expected. ...... ---------------------------------------------------------------------- Ran 6 tests in 0.017s OK Compound library not available. Some functionality may not work as expected. make -f modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_gfx.py_run make -f modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/DependInfo.cmake "--color=" [ 98%] running checks test_io_omf.py cd /build/reproducible-path/openstructure-2.9.2/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_omf.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_io_sdf.py cd /build/reproducible-path/openstructure-2.9.2/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_sdf.py" Compound library not available. Some functionality may not work as expected. ....s ---------------------------------------------------------------------- Ran 5 tests in 0.025s OK (skipped=1) make -f modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build.make modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build.make modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_invalid.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests/test_invalid.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .No compound library available. Ignoring test_stereochemistry.py tests. No citation for identifier '1' found. Couldn't set author list. SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X. ..[ 98%] Built target test_io_pdb.py_run make -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build Compound library not available. Some functionality may not work as expected. make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/DependInfo.cmake "--color=" [ 98%] running checks for module mol_alg make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_mol_alg_tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_io_omf.py_run make -f modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/DependInfo.cmake "--color=" [ 98%] running checks test_pdbize.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_pdbize.py" SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' ....... ---------------------------------------------------------------------- Ran 7 tests in 0.015s OK Compound library not available. Some functionality may not work as expected. [ 98%] running checks test_convenient_superpose.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_convenient_superpose.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Running 4 test cases... *** No errors detected [ 98%] Built target test_invalid.py_run make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. [ 98%] Built target ost_mol_alg_tests_run make -f modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .[ 98%] running checks test_hbond.py ..cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_hbond.py" .. ---------------------------------------------------------------------- Ran 5 tests in 0.055s OK [ 98%] running checks test_accessibility.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_accessibility.py" Compound library not available. Some functionality may not work as expected. Compound library not available. Some functionality may not work as expected. .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_io_sdf.py_run make -f modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build ..make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' ...... ---------------------------------------------------------------------- Ran 8 tests in 0.040s OK [ 98%] running checks test_sec_struct.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_sec_struct.py" .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. . ---------------------------------------------------------------------- Ran 2 tests in 0.065s OK [ 98%] Built target test_pdbize.py_run make -f modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/DependInfo.cmake "--color=" smake[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] Built target test_hbond.py_run make -f modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/DependInfo.cmake "--color=" [ 98%] running checks test_lddt.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_lddt.py" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_qsscore.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_qsscore.py" s ---------------------------------------------------------------------- Ran 1 test in 0.001s OK (skipped=1) make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 98%] Built target test_sec_struct.py_run make -f modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 98%] running checks test_stereochemistry.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_stereochemistry.py" .Compound library not available. Some functionality may not work as expected. No compound library available. Ignoring test_stereochemistry.py tests. ./build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_img.cc: In member function 'void io::test_io_img::test_method()': /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_img.cc:105:10: warning: variable 'failed' set but not used [-Wunused-but-set-variable] 105 | bool failed=false; | ^~~~~~ /build/reproducible-path/openstructure-2.9.2/modules/io/tests/test_io_img.cc:130:10: warning: variable 'failed' set but not used [-Wunused-but-set-variable] 130 | bool failed=false; | ^~~~~~ .No compound library available. Ignoring test_lddt.py tests. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X. unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X' [ 98%] Built target test_stereochemistry.py_run make -f modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_contact_score.py make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_contact_score.py" [ 98%] Built target test_lddt.py_run No compound lib available. Ignoring test_qsscore.py tests. make -f modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/DependInfo.cmake "--color=" Compound library not available. Some functionality may not work as expected. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_biounit.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_biounit.py" [ 98%] Built target test_qsscore.py_run make -f modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build Compound library not available. Some functionality may not work as expected. make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_ost_dockq.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_ost_dockq.py" .SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X. No SEQRES found for chain 'A'. Most likely the entity_poly_seq category was missing from the input file. No SEQRES found for chain 'B'. Most likely the entity_poly_seq category was missing from the input file. No SEQRES found for chain 'C'. Most likely the entity_poly_seq category was missing from the input file. .......s ---------------------------------------------------------------------- Ran 12 tests in 5.526s OK (skipped=1) Ignoring struct_ref_seq_dif with missing data item seq_num Ignoring struct_ref_seq_dif with missing data item seq_num SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X. unknown residue 'ACE' in SEQRES record. Setting one-letter-code to 'X' .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Compound library not available. Some functionality may not work as expected. [ 98%] Built target test_io_mmcif.py_run make -f modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_bblddt.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/alg/tests/test_bblddt.py" No compound lib available. Ignoring contact_score.py tests. Compound library not available. Some functionality may not work as expected. . ---------------------------------------------------------------------- Ran 1 test in 0.845s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' .[ 98%] Built target test_contact_score.py_run [ 98%] Built target test_biounit.py_run make -f modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build.make modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/DependInfo.cmake "--color=" make -f modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build.make modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/DependInfo.cmake "--color=" .make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build.make modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build.make modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [ 98%] running checks test_antechamber.py cd /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests/test_antechamber.py" [100%] running checks test_seq.py cd /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib/python3.13/dist-packages/ /usr/bin/python3 /build/reproducible-path/openstructure-2.9.2/modules/seq/base/tests/test_seq.py" Compound library not available. Some functionality may not work as expected. Compound library not available. Some functionality may not work as expected. No compound lib available. Ignoring test_bblddt.py tests. ... ---------------------------------------------------------------------- Ran 9 tests in 6.695s OK .. ---------------------------------------------------------------------- Ran 3 tests in 0.133s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target test_bblddt.py_run [100%] Built target test_convenient_superpose.py_run [100%] Built target test_antechamber.py_run .............. ---------------------------------------------------------------------- Ran 14 tests in 0.038s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target test_seq.py_run . ---------------------------------------------------------------------- Ran 1 test in 2.455s OK make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target test_ost_dockq.py_run . ---------------------------------------------------------------------- Ran 2 tests in 12.725s OK (skipped=1) Could not find NACCESS, could not compare Accessiblity function... make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target test_accessibility.py_run [100%] Linking CXX executable ../../../../tests/ost_mol_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_tests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_mol_tests.dir/link.d CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o CMakeFiles/ost_mol_tests.dir/test_chain.cc.o CMakeFiles/ost_mol_tests.dir/test_conn.cc.o CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o CMakeFiles/ost_mol_tests.dir/test_builder.cc.o CMakeFiles/ost_mol_tests.dir/test_delete.cc.o CMakeFiles/ost_mol_tests.dir/test_entity.cc.o CMakeFiles/ost_mol_tests.dir/test_ics.cc.o CMakeFiles/ost_mol_tests.dir/test_query.cc.o CMakeFiles/ost_mol_tests.dir/test_surface.cc.o CMakeFiles/ost_mol_tests.dir/test_residue.cc.o CMakeFiles/ost_mol_tests.dir/test_view.cc.o CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o CMakeFiles/ost_mol_tests.dir/tests.cc.o -o ../../../../tests/ost_mol_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_mol_tests make -f modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] running checks for module mol cd /build/reproducible-path/openstructure-2.9.2/modules/mol/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_mol_tests Running 71 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_mol_tests_run . ---------------------------------------------------------------------- Ran 2 tests in 61.530s OK (skipped=1) make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target test_cadscore.py_run [100%] Linking CXX executable ../../../tests/ost_io_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_io_tests.dir/link.txt --verbose=1 [100%] Linking CXX executable ../../../../tests/ost_mol_mm_tests cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_mm_tests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_io_tests.dir/link.d CMakeFiles/ost_io_tests.dir/test_clustal.cc.o CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o CMakeFiles/ost_io_tests.dir/test_pir.cc.o CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o CMakeFiles/ost_io_tests.dir/tests.cc.o CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o CMakeFiles/ost_io_tests.dir/test_io_img.cc.o CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o -o ../../../tests/ost_io_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_io.so.2.9.2 ../../../stage/lib/libost_mol_alg.so.2.9.2 ../../../stage/lib/libost_conop.so.2.9.2 ../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../stage/lib/libost_seq.so.2.9.2 ../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.2 ../../../stage/lib/libost_img.so.2.9.2 ../../../stage/lib/libost_info.so.2.9.2 ../../../stage/lib/libost_base.so.2.9.2 ../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_io_tests make -f modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests_run.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/ost_mol_mm_tests.dir/link.d CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o -o ../../../../tests/ost_mol_mm_tests -L/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib -Wl,-rpath,/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_mol_mm.so.2.9.2 ../../../../stage/lib/libost_io.so.2.9.2 ../../../../stage/lib/libost_mol_alg.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.2 ../../../../stage/lib/libost_db.so.2.9.2 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.2 ../../../../stage/lib/libost_seq.so.2.9.2 ../../../../stage/lib/libost_mol.so.2.9.2 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.2 ../../../../stage/lib/libost_img.so.2.9.2 ../../../../stage/lib/libost_info.so.2.9.2 ../../../../stage/lib/libost_base.so.2.9.2 ../../../../stage/lib/libost_geom.so.2.9.2 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libOpenMM.so make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/ost_io_tests_run.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_mol_mm_tests make -f modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/DependInfo.cmake "--color=" [100%] running checks for module io cd /build/reproducible-path/openstructure-2.9.2/modules/io/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_io_tests make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] running checks for module mol_mm cd /build/reproducible-path/openstructure-2.9.2/modules/mol/mm/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/tests/ost_mol_mm_tests Running 182 test cases... unable to open database file WARNING: skipping SEQRES import unit test. Compound lib is required unable to open database file WARNING: skipping mmcif_entity_poly_tests unit test. Compound library is required unable to open database file unable to open database file unable to open database file unable to open database file unable to open database file *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_io_tests_run Running 13 test cases... *** No errors detected make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target ost_mol_mm_tests_run make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' cd /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2 /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/CMakeFiles/check.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' [100%] Built target check make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/openstructure-2.9.2/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.2 -B/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_base.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_base.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_base.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_base.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/export_helper/generic_property_def.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/export_helper/pair_to_tuple_conv.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/export_helper/vec_to_list_conv.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/test_utils/compare_files.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./generic_property.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./integrity_error.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./invalid_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./ptr_observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./log.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./log_sink.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./profile.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./dyn_cast.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./stdint.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./stdint_msc.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./range.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./units.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./message.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./platform.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./string_ref.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./pod_vector.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./fixed_string.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./tri_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./boost_filesystem_helper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./paged_array.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/_ost_base.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/_ost_base.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./settings.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./stutil.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./table.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./table_selector.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./xmlrunner.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./testutils.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./settings.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./stutil.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./table.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./table_selector.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./xmlrunner.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/./testutils.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_bindings.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_bindings.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_bindings.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_bindings.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/bindings/./wrap_tmalign.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/_ost_bindings.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/_ost_bindings.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./lga.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hbplus.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./msms.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./tmtools.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./dssp.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./clustalw.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./utils.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./naccess.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits2.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits3.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./blast.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./cadscore.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./kclust.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./ialign.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./mmseqs2.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./dockq.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./lga.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hbplus.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./msms.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./tmtools.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./dssp.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./clustalw.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./utils.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./naccess.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits2.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./hhblits3.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./blast.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./cadscore.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./kclust.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./ialign.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./mmseqs2.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/bindings/./dockq.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./dllexport.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/./version.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_conop.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_conop.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_conop.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_conop.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./conop.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./processor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./amino_acids.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./diag.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./model_check.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./heuristic.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./compound.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./compound_lib.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./rule_based.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./minimal_compound_lib.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./compound_lib_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/conop/./ring_finder.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/chemdict_tool -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/chemdict_tool" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/_ost_conop.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/_ost_conop.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/./cleanup.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/conop/./cleanup.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_db.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_db.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_db.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_db.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./sqlite_wrap.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./sqlite_conv.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./linear_indexer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./binary_container.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/db/./extract_data_helper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/db/_ost_db.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/db/_ost_db.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/db/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/db/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_geom.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_geom.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_geom.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_geom.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/export_helper/vector.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./def.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./exc.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./geom.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./mat.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./mat2.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./mat3.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./mat4.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vec.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vec2.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vec3.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vec4.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vecmat_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vecmat2_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vecmat3_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vecmat4_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./circular_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./constants.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite2.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite3.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite2_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./composite3_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./aligned_cuboid.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./vec_mat_predicates.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./quat.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./transform.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./point_cloud.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/geom/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/geom/_ost_geom.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/geom/_ost_geom.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/geom/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/geom/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gfx.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gfx.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gfx.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gfx.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen_s.hh -- Up-to-date: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen_s.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/map_iso_spec.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/map_octree.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/octree_isocont.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/cartoon_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/custom_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/cpk_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/debug_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/simple_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/sline_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/trace_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/line_trace_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/backbone_trace.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/entity_detail.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/entity_renderer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/trace_renderer_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/connect_renderer_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/mapped_property.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/entity_renderer_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/tabulated_trig.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/impl/fast_spheres.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/line_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/custom_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/cpk_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/simple_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/sline_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/line_trace_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/cartoon_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/render_options/trace_render_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/by_element_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/by_chain_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/uniform_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/gradient_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/entity_view_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/basic_gradient_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/gradient_level_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/color_ops/map_handle_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./render_pass.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./bitmap_io.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./collada_exporter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./color.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./entity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./entity_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gl_helper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_node_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_node_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_object_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_object.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_object_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_prim.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./symmetry_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gfx_test_object.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./glwin_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./input.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./prim_list.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./scene.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./selection.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./surface.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./texture.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./vertex_array.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./vertex_array_helper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./scene_observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gl_include.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./glext_include.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./render_mode.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./material.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gradient.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gradient_manager.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./primitives.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./povray_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./povray.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./exporter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./exporter_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./gost_exporter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./map_handle_color_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./map_iso.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./map_slab.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gfx/./map_iso_prop.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/textures/test_texture.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/textures/glyph_texture.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/_ost_gfx.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/_ost_gfx.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/./py_gfx_obj.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gfx/./py_gfx_obj.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/gradients.xml -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gui.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gui.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gui.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_gui.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_option_group.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_options.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/selection_tool.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/measure_tool.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_option.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_manager.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_options_widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/manipulator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/tool_options_win.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/mouse_event.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/tools/map_tool.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/align_properties_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/base_row.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/background_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/conservation_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/secstr_row.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_secstr_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_selection_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_text_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_delegate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_model.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_row.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_search_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_table_view.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_viewer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/tick_painter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/title_row.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/alignment_view_object.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/base_view_object.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_view_object.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/main_thread_runner.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/output_redirector.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/completer_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/dir_model.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/gutter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/path_completer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_context_parser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_completer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_shell.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_shell_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_shell_widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_tokenizer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_syntax_highlighter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/text_logger.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_interpreter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_interpreter_worker.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/python_shell_text_document_layout.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/shell_history.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/state_machine.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/state.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/transition.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/python_shell/transition_guard.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/button_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/drop_box.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/panel_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/panel_manager.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/bottom_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/button_box.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/event_button.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/panel_widget_container.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/panel_bar_widget_holder.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/side_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/splitter_panel_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/panels/tabbed_panel_bar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/context_menu.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/current_selection_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/custom_part_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/entity_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/entity_part_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/gfx_scene_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/label_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/root_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/render_mode_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/render_modes_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/scene_node.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/scene_win.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/scene_win/scene_win_model.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/messages/message_widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/messages/message_box_widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/messages/log_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/argand.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer_panel.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer_panel_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/draw_overlay.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/drawing_functions.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/fft_panel.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/info_panel.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/img2qt.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/mask_overlay.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/null_overlay.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_base_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_gui.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/pointlist_overlay.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/pointlist_overlay_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/strategies.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/strategies_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/data_viewer/viewer_normalizer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./file_browser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./file_type_dialog.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./file_viewer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./gl_canvas.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./gl_win.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./scene_menu.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./gosty_app.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./admin.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./main.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./main_area.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./perspective.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./scene_selection.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./main_window.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./dock_widget.hh -- Up-to-date: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./dock_widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./thin_splitter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./widget.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./widget_geom_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./widget_pool.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./widget_registry.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./widget_state_saver.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/gui/./file_loader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/gosty -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/gosty" to "$ORIGIN/../../lib" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/add_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/close_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/critical_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/delete_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/distance_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/find_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/information_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/map_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/menubar_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/rigid_body_manipulator_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/selection_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/show_sidebar_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/site_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/split_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/warning_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/icons/refresh.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/gui/images/logo-small.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/_ost_gui.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/_ost_gui.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/color_options_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/color_select_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/combo_options_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/cpk_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/custom_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_editor_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_info_handler.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_list_model.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_preset_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/hsc_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/immutable_gradient_info_handler.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/immutable_preset_info_handler.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/init_inspector.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/inspector_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/map_level_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/remote.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_editor_list_model.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_editor_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_info_handler.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_list_model.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_mode_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_op.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_options_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/scene_observer_impl.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/scene_selection_helper.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/simple_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/sline_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/toolbar_options_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/trace_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/tube_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/uniform_color_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/visibility_op.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/line_trace_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/wireframe_widget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/query_editor.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/color_options_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/color_select_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/combo_options_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/cpk_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/custom_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_editor_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_info_handler.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_list_model.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/gradient_preset_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/hsc_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/immutable_gradient_info_handler.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/immutable_preset_info_handler.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/init_inspector.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/inspector_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/map_level_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/remote.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_editor_list_model.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_editor_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_info_handler.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_list_model.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/preset_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_mode_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_op.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/render_options_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/scene_observer_impl.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/scene_selection_helper.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/simple_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/sline_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/toolbar_options_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/trace_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/tube_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/uniform_color_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/visibility_op.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/line_trace_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/wireframe_widget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/scene/query_editor.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/termuse.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/superpositiondialog.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/init.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/menu.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/termuse.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/superpositiondialog.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/init.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/dng/menu.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_context_menu.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_menubar.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_spacenav.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_splash.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./trajectory_viewer.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./helpwidget.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./table.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./gosty_startup.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_context_menu.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_menubar.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_spacenav.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./init_splash.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./trajectory_viewer.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./helpwidget.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./table.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/gui/./gosty_startup.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/presets.xml -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/icons/color_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/icons/preset_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/icons/render_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/scene/icons/tool_icon.png -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/raster_image/raster_image.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/dispatch.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_base_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_def.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_factory.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_frequency_domain.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_half_frequency_domain.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_spatial_domain.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_algorithm.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/image_state_visitor_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/index.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/type_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/image_state/value_holder.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./algorithm.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./circle_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./composite_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./data_algorithm.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./data_observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./data_types.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./data.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./debug.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./dllexport.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./extent_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./extent_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./extent.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_factory.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_handle_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_list.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_state_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image_state.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./image.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./inverted_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./map.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask_base_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./normalizer_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./normalizer_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./null_data.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./observable.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./paste_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./peak.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./phase.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./physical_units.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./pixel_sampling.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./point_list.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./point.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./polygon_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./progress.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./size.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./spherical_mask.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./util.cc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./value_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./vecmat.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/./mask_info_convert.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/_ost_img.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/_ost_img.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img_alg.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img_alg.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img_alg.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_img_alg.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./anisotropic.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./auto_correlate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./clear.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./clip_min_max.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./conjugate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./convolute.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./correlate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./cross_correlate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./density_slice.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./dft.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./fft.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./fftw_helper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./fill.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./filter.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./fourier_filters.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./gaussian_gradient_magnitude.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./gaussian.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./gaussian_laplacian.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./highest_peak_search_3d.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./histogram.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./line_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./local_sigma_threshold.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./mask_image.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./negate.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./normalizer_factory.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./norm.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./normalizer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./norm_linear.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./norm_log.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./norm_od.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./power_spectrum.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./randomize.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./smooth_mask_image.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./stat.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./stat_accumulator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./stat_min_max.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./threshold.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./transcendentals.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./transform.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./transform_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./alg_transform.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./alg_mirror.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./alg_shift.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./discrete_shrink.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./transformation_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./transformations.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./fractional_shift.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./polar.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./line_average.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/img/alg/./rscrosscorr.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/alg/_ost_img_alg.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/alg/_ost_img_alg.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/alg/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/img/alg/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_info.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_info.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_info.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_info.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_error.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_group.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_item.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_path.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_set.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./info_verbose_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./item_type.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./geom_info_conversion.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/info/./item_type_cast.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/info/_ost_info.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/info/_ost_info.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/info/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/info/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_io.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_io.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_io.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_io.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/chemdict_parser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/star_parser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/star_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/mmcif_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/mmcif_info.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/mmcif_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/io_profile.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/dcd_io.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_crd_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_pqr_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_mae_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_mmcif_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/pdb_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_pdb_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/pdb_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/entity_io_sdf_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/sdf_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/sdf_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/save_entity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/load_entity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/surface_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/load_surface.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/surface_io_msms_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/pdb_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/sdf_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/mmcif_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/stereochemical_params_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/mol/omf.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/load_map.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_df3_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/image_format.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_dx_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_spi_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_situs_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_mrc_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_dat_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_ipl_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_jpk_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_nanoscope_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_png_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_dm3_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/map_io_tiff_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/tiff_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/img/jpk_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/sequence_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/fasta_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/pir_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/promod_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/profile_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/hhm_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/pssm_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/clustal_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/load.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/seq/save.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./binary_data_sink.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./io_manager.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./binary_data_source.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./container_serialization.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./swap_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./io_utils.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./io_exception.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./convert.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./converting_streams.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./formatted_line.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./chemdict_parser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./star_parser.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./star_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./mmcif_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./mmcif_info.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./mmcif_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./io_profile.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./dcd_io.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_crd_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_pqr_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_mae_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_mmcif_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./pdb_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_pdb_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./pdb_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./entity_io_sdf_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./sdf_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./sdf_writer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./save_entity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./load_entity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./surface_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./load_surface.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./surface_io_msms_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./pdb_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./sdf_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./mmcif_str.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./stereochemical_params_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./omf.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./sequence_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./fasta_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./pir_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./promod_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./profile_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./hhm_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./pssm_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./clustal_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./load.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./save.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./load_map.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_df3_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./image_format.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_dx_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_spi_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_situs_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_mrc_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_dat_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_ipl_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_jpk_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_nanoscope_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_png_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_dm3_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./map_io_tiff_handler.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./tiff_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/io/./jpk_util.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/_ost_io.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/_ost_io.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./remote.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./repository.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./remote.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/io/./repository.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/pointer_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/atom_group.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/atom_prop.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/atom_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/atom_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/chain_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/chain_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/connector_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/connector_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/dihedral.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/entity_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/entity_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/fragment_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/fragment_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/query_ast.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/query_ast_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/query_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/query_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/residue_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/residue_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/surface_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/surface_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/torsion_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/impl/torsion_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./atom_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./atom_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./atom_view.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./bond_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./bond_table.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chain_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chain_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chain_view.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chain_type.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chem_class.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./chem_type.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./coord_group.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./coord_source.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./in_mem_coord_source.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./coord_frame.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./editor_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./editor_type_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./mol.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_base.hh -- Up-to-date: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_observer_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_property_mapper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_view.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_visitor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./entity_visitor_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./handle_type_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./ics_editor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./not_connected_error.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./property_id.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./query.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./query_error.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./query_state.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./residue_base.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./residue_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./residue_prop.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./residue_view.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./sec_structure.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./spatial_organizer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./surface.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./surface_builder.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./builder.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./surface_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./surface_prop.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./torsion_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./transfer_connectivity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./query_view_wrapper.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./view_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./view_type_fw.hh -- Up-to-date: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./view_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./xcs_editor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./bounding_box.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./transform.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/_ost_mol.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/_ost_mol.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/lddt -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/lddt" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_alg.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_alg.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_alg.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_alg.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./svd_superpose.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./sec_structure_segments.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./local_dist_diff_test.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./distance_test_common.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./distance_rmsd_test.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./superpose_frames.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./filter_clashes.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./construct_cbeta.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./clash_score.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./trajectory_analysis.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./structure_analysis.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./consistency_checks.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./pdbize.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./adjacency_bitmap.hh -- Up-to-date: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./consistency_checks.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./contact_overlap.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./domain_find.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./similarity_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./accessibility.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./sec_struct.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./nonstandard.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./molck.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./find_membrane.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./entity_to_density.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./biounit.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/alg/./gdt.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/atom_scattering_properties.txt -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/stereo_chemical_props.txt -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/_ost_mol_alg.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/_ost_mol_alg.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./views.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./superpose.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./qsscoring.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./trajectory_analysis.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./structure_analysis.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./helix_kinks.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./hbond.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./lddt.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./qsscore.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./scoring.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./chain_mapping.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./stereochemistry.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./dockq.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./contact_score.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_base.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_scrmsd.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_lddtpli.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./bb_lddt.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./views.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./superpose.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./qsscoring.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./trajectory_analysis.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./structure_analysis.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./helix_kinks.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./hbond.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./lddt.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./qsscore.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./scoring.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./chain_mapping.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./stereochemistry.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./dockq.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./contact_score.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_base.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_scrmsd.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./ligand_scoring_lddtpli.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/alg/./bb_lddt.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/stereo_data.json -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_mm.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_mm.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_mm.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_mol_mm.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./forcefield.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./ff_reader.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./buildingblock.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./block_modifiers.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./gromacs_block_modifiers.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./heuristic_block_modifiers.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./interaction.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./settings.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./simulation.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./modeller.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./observer.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./state_extractor.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./system_creator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./topology_creator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./index.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./topology.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/mol/mm/./steep.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/forcefields/AMBER03.dat -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/forcefields/CHARMM27.dat -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/_ost_mol_mm.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/_ost_mol_mm.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/./antechamber.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/mol/mm/./antechamber.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/impl/sequence_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/impl/sequence_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/impl/sequence_list_impl_fw.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/impl/sequence_list_impl.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/impl/sequence_list_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./sequence_list.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./sequence_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./alignment_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./sequence_op.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./aligned_region.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./aligned_column.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./aligned_column_iterator.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./invalid_sequence.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./views_from_sequences.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/./profile_handle.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/_ost_seq.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/_ost_seq.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq_alg.so.2.9.2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq_alg.so.2.9 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq_alg.so.2.9.2" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/libost_seq_alg.so -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./alignment_opts.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./clip_alignment.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./conservation.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./contact_prediction_score.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./contact_weight_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./distance_map.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./entropy.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./global_align.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./ins_del.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./local_align.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./merge_pairwise_alignments.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./module_config.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./pair_subst_weight_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./semiglobal_align.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./sequence_identity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./sequence_similarity.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./subst_weight_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./variance_map.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./default_contact_weight_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./hmm_pseudo_counts.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./hmm_score.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/include/ost/seq/alg/./wrap_parasail.hh -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/_ost_seq_alg.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/_ost_seq_alg.so" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./__init__.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./mat.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./renumber.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./aaindex.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./__init__.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./mat.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./renumber.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/seq/alg/./aaindex.pyc -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/aaindex/aaindex1 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/aaindex/aaindex2 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/share/openstructure/aaindex/aaindex3 -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/ost_config -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/ost -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/dng -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/ost_startup.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/python3.13/dist-packages/ost/dng_startup.py -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/molck -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/bin/molck" to "" -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/ost-compare-ligand-structures -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/ost-compare-structures -- Installing: /build/reproducible-path/openstructure-2.9.2/debian/tmp/usr/lib/openstructure/libexec/ost-compare-structures-legacy make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2/obj-x86_64-linux-gnu' debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2' find debian/tmp/usr/lib -name '*.pyc' | xargs --no-run-if-empty rm make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2' dh_install debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.2' find debian/python3-ost/usr/lib/python3/dist-packages -type f \ | xargs --no-run-if-empty chmod -x find debian/tmp/usr/lib -name 'libost_*.so.*' \ | while read LIB; \ do dh_install -p$(echo $LIB | cut -d / -f 5 | cut -d . -f 1 | sed 's/_/-/g')2.9 \ $LIB usr/lib/x86_64-linux-gnu; \ done find debian/tmp/usr/lib -name 'libost_*.so' \ | while read LIB; \ do dh_install -p$(echo $LIB | cut -d / -f 5 | cut -d . -f 1 | sed 's/_/-/g')-dev \ $LIB usr/lib/x86_64-linux-gnu; \ done make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.2' dh_installdocs dh_installchangelogs dh_python3 I: dh_python3 fs:421: renaming _ost_base.so to _ost_base.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_conop.so to _ost_conop.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_gui.so to _ost_gui.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_gfx.so to _ost_gfx.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_geom.so to _ost_geom.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_io.so to _ost_io.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_bindings.so to _ost_bindings.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_img.so to _ost_img.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_img_alg.so to _ost_img_alg.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_db.so to _ost_db.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_mol.so to _ost_mol.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_mol_alg.so to _ost_mol_alg.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_mol_mm.so to _ost_mol_mm.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_info.so to _ost_info.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_seq.so to _ost_seq.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming _ost_seq_alg.so to _ost_seq_alg.cpython-313-x86_64-linux-gnu.so dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Provides field of package python3-ost: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-ost: substitution variable ${python3:Provides} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libost-base2.9' in '../libost-base2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-bindings2.9-dbgsym' in '../libost-bindings2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-db2.9' in '../libost-db2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-geom2.9-dbgsym' in '../libost-geom2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gui2.9' in '../libost-gui2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img-alg2.9-dbgsym' in '../libost-img-alg2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-info2.9' in '../libost-info2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-io2.9-dbgsym' in '../libost-io2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-mm2.9' in '../libost-mol-mm2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq2.9' in '../libost-seq2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'openstructure-dbgsym' in '../openstructure-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-base-dev' in '../libost-base-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gui-dev' in '../libost-gui-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq-dev' in '../libost-seq-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol2.9-dbgsym' in '../libost-mol2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-db-dev' in '../libost-db-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-info-dev' in '../libost-info-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-mm-dev' in '../libost-mol-mm-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-geom-dev' in '../libost-geom-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-io-dev' in '../libost-io-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-base2.9-dbgsym' in '../libost-base2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-bindings-dev' in '../libost-bindings-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-db2.9-dbgsym' in '../libost-db2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq2.9-dbgsym' in '../libost-seq2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-dev' in '../libost-mol-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gfx-dev' in '../libost-gfx-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img-alg-dev' in '../libost-img-alg-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-conop-dev' in '../libost-conop-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-bindings2.9' in '../libost-bindings2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-alg-dev' in '../libost-mol-alg-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img-dev' in '../libost-img-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq-alg-dev' in '../libost-seq-alg-dev_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-info2.9-dbgsym' in '../libost-info2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gfx2.9' in '../libost-gfx2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-geom2.9' in '../libost-geom2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-mm2.9-dbgsym' in '../libost-mol-mm2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img2.9' in '../libost-img2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'openstructure' in '../openstructure_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-conop2.9' in '../libost-conop2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'python3-ost' in '../python3-ost_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img2.9-dbgsym' in '../libost-img2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gui2.9-dbgsym' in '../libost-gui2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-gfx2.9-dbgsym' in '../libost-gfx2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-conop2.9-dbgsym' in '../libost-conop2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-io2.9' in '../libost-io2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol2.9' in '../libost-mol2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq-alg2.9' in '../libost-seq-alg2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-seq-alg2.9-dbgsym' in '../libost-seq-alg2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-alg2.9' in '../libost-mol-alg2.9_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-mol-alg2.9-dbgsym' in '../libost-mol-alg2.9-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'python3-ost-dbgsym' in '../python3-ost-dbgsym_2.9.2-2_amd64.deb'. dpkg-deb: building package 'libost-img-alg2.9' in '../libost-img-alg2.9_2.9.2-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../openstructure_2.9.2-2_amd64.buildinfo dpkg-genchanges --build=binary -O../openstructure_2.9.2-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2835719 and its subdirectories I: Current time: Sun Mar 9 00:48:48 -12 2025 I: pbuilder-time-stamp: 1741524528 Sun Mar 9 12:48:54 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Sun Mar 9 12:48:54 UTC 2025 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Sun Mar 9 12:59:22 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Sun Mar 9 12:59:23 UTC 2025 I: openstructure_2.9.2-2_amd64.changes: Format: 1.8 Date: Fri, 07 Mar 2025 07:41:00 -0500 Source: openstructure Binary: libost-base-dev libost-base2.9 libost-base2.9-dbgsym libost-bindings-dev libost-bindings2.9 libost-bindings2.9-dbgsym libost-conop-dev libost-conop2.9 libost-conop2.9-dbgsym libost-db-dev libost-db2.9 libost-db2.9-dbgsym libost-geom-dev libost-geom2.9 libost-geom2.9-dbgsym libost-gfx-dev libost-gfx2.9 libost-gfx2.9-dbgsym libost-gui-dev libost-gui2.9 libost-gui2.9-dbgsym libost-img-alg-dev libost-img-alg2.9 libost-img-alg2.9-dbgsym libost-img-dev libost-img2.9 libost-img2.9-dbgsym libost-info-dev libost-info2.9 libost-info2.9-dbgsym libost-io-dev libost-io2.9 libost-io2.9-dbgsym libost-mol-alg-dev libost-mol-alg2.9 libost-mol-alg2.9-dbgsym libost-mol-dev libost-mol-mm-dev libost-mol-mm2.9 libost-mol-mm2.9-dbgsym libost-mol2.9 libost-mol2.9-dbgsym libost-seq-alg-dev libost-seq-alg2.9 libost-seq-alg2.9-dbgsym libost-seq-dev libost-seq2.9 libost-seq2.9-dbgsym openstructure openstructure-dbgsym python3-ost python3-ost-dbgsym Architecture: amd64 Version: 2.9.2-2 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Andrius Merkys Description: libost-base-dev - Open-Source Computational Structural Biology Framework libost-base2.9 - Open-Source Computational Structural Biology Framework libost-bindings-dev - Open-Source Computational Structural Biology Framework libost-bindings2.9 - Open-Source Computational Structural Biology Framework libost-conop-dev - Open-Source Computational Structural Biology Framework libost-conop2.9 - Open-Source Computational Structural Biology Framework libost-db-dev - Open-Source Computational Structural Biology Framework libost-db2.9 - Open-Source Computational Structural Biology Framework libost-geom-dev - Open-Source Computational Structural Biology Framework libost-geom2.9 - Open-Source Computational Structural Biology Framework libost-gfx-dev - Open-Source Computational Structural Biology Framework libost-gfx2.9 - Open-Source Computational Structural Biology Framework libost-gui-dev - Open-Source Computational Structural Biology Framework libost-gui2.9 - Open-Source Computational Structural Biology Framework libost-img-alg-dev - Open-Source Computational Structural Biology Framework libost-img-alg2.9 - Open-Source Computational Structural Biology Framework libost-img-dev - Open-Source Computational Structural Biology Framework libost-img2.9 - Open-Source Computational Structural Biology Framework libost-info-dev - Open-Source Computational Structural Biology Framework libost-info2.9 - Open-Source Computational Structural Biology Framework libost-io-dev - Open-Source Computational Structural Biology Framework libost-io2.9 - Open-Source Computational Structural Biology Framework libost-mol-alg-dev - Open-Source Computational Structural Biology Framework libost-mol-alg2.9 - Open-Source Computational Structural Biology Framework libost-mol-dev - Open-Source Computational Structural Biology Framework libost-mol-mm-dev - Open-Source Computational Structural Biology Framework libost-mol-mm2.9 - Open-Source Computational Structural Biology Framework libost-mol2.9 - Open-Source Computational Structural Biology Framework libost-seq-alg-dev - Open-Source Computational Structural Biology Framework libost-seq-alg2.9 - Open-Source Computational Structural Biology Framework libost-seq-dev - Open-Source Computational Structural Biology Framework libost-seq2.9 - Open-Source Computational Structural Biology Framework openstructure - Open-Source Computational Structural Biology Framework python3-ost - Open-Source Computational Structural Biology Framework - Python 3 Closes: 1092077 Changes: openstructure (2.9.2-2) unstable; urgency=medium . * Skip testMultipleClustalW test (Closes: #1092077) * Simplify debian/rules. Checksums-Sha1: 1258fd5a8616714269e57f5883d3d88d4db80857 28924 libost-base-dev_2.9.2-2_amd64.deb 6be16b00205aba93afdaf0562ad1c6a7469a60b5 263500 libost-base2.9-dbgsym_2.9.2-2_amd64.deb a11409c356cfb6189c33f40ee1815e12dec6cbdb 34816 libost-base2.9_2.9.2-2_amd64.deb ade81eb91e2a6633076472b33331e63eebe33cf5 16464 libost-bindings-dev_2.9.2-2_amd64.deb bfe0a31ec9be88019a07572e7d25e41ea8e3b38e 1798000 libost-bindings2.9-dbgsym_2.9.2-2_amd64.deb 35b2c447d6447be581ceaee48e28bbd64fa0c04f 203732 libost-bindings2.9_2.9.2-2_amd64.deb 61b745b270a5a99e0b128919e80aa7ebe8e6f669 23336 libost-conop-dev_2.9.2-2_amd64.deb 9d0af545458c11b332d61e5f922226ad8dda1f0f 3040524 libost-conop2.9-dbgsym_2.9.2-2_amd64.deb 692e02adc31056110876f9f9530b35df92a549b9 189000 libost-conop2.9_2.9.2-2_amd64.deb 78b39cd72abbcfb69d517c79a573ead62330720d 18792 libost-db-dev_2.9.2-2_amd64.deb e7f24290d41b5ffc9f04f5d1c1e0fc28c42e5ee3 498288 libost-db2.9-dbgsym_2.9.2-2_amd64.deb 3612f95687a174c019917c4734f125395f9c2b18 45456 libost-db2.9_2.9.2-2_amd64.deb edb12e669dffb8542e98c848bdfb5f5f7bd3339a 29908 libost-geom-dev_2.9.2-2_amd64.deb ce92c9ace349ee2f5c362a9947becf41e4c211fa 871764 libost-geom2.9-dbgsym_2.9.2-2_amd64.deb 6916cc752277bf62488f65b4aeb599d0945f2cfc 66384 libost-geom2.9_2.9.2-2_amd64.deb ad53e660377b86df5f7888079e302bb17d0f0453 68728 libost-gfx-dev_2.9.2-2_amd64.deb 6ac79a2fbcc607bfdfeaa87e3febac5710cda3df 9476908 libost-gfx2.9-dbgsym_2.9.2-2_amd64.deb 81a6bb524a7486ca5b5783cf27019aa0a28f972d 432148 libost-gfx2.9_2.9.2-2_amd64.deb 2cf2da95d11d6f1810b7e59e357a4cfb53ad83dd 54532 libost-gui-dev_2.9.2-2_amd64.deb 83def663b0393e98d77422f93707c84673fda5ca 22130228 libost-gui2.9-dbgsym_2.9.2-2_amd64.deb 5f48237baa0ec350173c8e13923b0aaee4494199 506588 libost-gui2.9_2.9.2-2_amd64.deb b7c65a71b5ea2e2072a80cb85bedf4b79045fde8 30656 libost-img-alg-dev_2.9.2-2_amd64.deb fc876141ca64473d303600a360d0813a78e4060b 1868028 libost-img-alg2.9-dbgsym_2.9.2-2_amd64.deb 93c9863a1e145762c6ea27b9ffd4d8b80d0e07c3 169368 libost-img-alg2.9_2.9.2-2_amd64.deb 42b9a85df8c3fdb5a29611dd0d0aedfa254f7c11 44468 libost-img-dev_2.9.2-2_amd64.deb 3caba531fa62f076dee7fb40ea9ed4767989e759 1780700 libost-img2.9-dbgsym_2.9.2-2_amd64.deb dea203b107acb433aa10377726157915ffa81522 143948 libost-img2.9_2.9.2-2_amd64.deb 67bfb36fce7b78afb34c996ac436ad7e7d35f3cd 21720 libost-info-dev_2.9.2-2_amd64.deb 0eeff0cd1e26c3d4c8b357053e8ce0088304a509 2434972 libost-info2.9-dbgsym_2.9.2-2_amd64.deb b82cf1bde7252affe66ea7fff3baee7379c59b74 167828 libost-info2.9_2.9.2-2_amd64.deb d6e7038a1c14a117b164550152bf76362a49e5b6 53348 libost-io-dev_2.9.2-2_amd64.deb 5a63ef211a5549a321e263d704b022a4edd015ff 18131372 libost-io2.9-dbgsym_2.9.2-2_amd64.deb 0ad5f956d2f2fbfc977db106872943749ac37323 883456 libost-io2.9_2.9.2-2_amd64.deb f343cd243e7505ea8e454bc58d4dc9589e8e0d84 32500 libost-mol-alg-dev_2.9.2-2_amd64.deb 0bd2300e4ea013cecbc5a736751f0e84b3474d30 9951932 libost-mol-alg2.9-dbgsym_2.9.2-2_amd64.deb 4d0bb910f027e406eaf4ed3635b2cb6eb2ead64c 369500 libost-mol-alg2.9_2.9.2-2_amd64.deb 3600e21e35980b9dedb1ac19f2e6bc360fb7ef38 59236 libost-mol-dev_2.9.2-2_amd64.deb db0d9363a336404d031d7c4bccaa7aead05d1020 29644 libost-mol-mm-dev_2.9.2-2_amd64.deb f88c317d09fcf1a0e54932a58264d795d93c9c2c 6413972 libost-mol-mm2.9-dbgsym_2.9.2-2_amd64.deb 524825f444c3bec3be4a9314c961a6a18013ab86 299012 libost-mol-mm2.9_2.9.2-2_amd64.deb 327aec4054585f833bc920b2b3eefc1707f9f2c2 8032460 libost-mol2.9-dbgsym_2.9.2-2_amd64.deb 6e6f1c4574e1397b9f07316f5316bd78554a92d2 394904 libost-mol2.9_2.9.2-2_amd64.deb 0c89cb7b3b3fab9b8c41b64ed46ebe6bf30dc34c 180052 libost-seq-alg-dev_2.9.2-2_amd64.deb 3ba91ec88eeccca8492e0157f320e8a79c39d80d 1841340 libost-seq-alg2.9-dbgsym_2.9.2-2_amd64.deb 5aa99d4d60ce28c5f0b0dfee440c109233d12ca6 254764 libost-seq-alg2.9_2.9.2-2_amd64.deb 401c07bf426947aadf4f2d71d77bc28c6b91e747 25816 libost-seq-dev_2.9.2-2_amd64.deb 4f671eb7241e952767c0b86629363eb0d58e4ce5 1204000 libost-seq2.9-dbgsym_2.9.2-2_amd64.deb 6b48abd8e54518258b15e2148001f29bd64f3fb8 91044 libost-seq2.9_2.9.2-2_amd64.deb 0da293f3ebfbfaa9e370ec8be3e407a3639ac3b9 1991756 openstructure-dbgsym_2.9.2-2_amd64.deb 314b286010813507a4c6bbc8a9243747e0b9ba5b 34009 openstructure_2.9.2-2_amd64.buildinfo e1b32a6dd76a98e3c692dd3986b8d370a94e6193 93114888 openstructure_2.9.2-2_amd64.deb 8c5b7c600c216777f0fbf3ca677ff51c675eb3da 65141384 python3-ost-dbgsym_2.9.2-2_amd64.deb e2b8b8792828bacd15368d0e670776a2f8c63999 3991776 python3-ost_2.9.2-2_amd64.deb Checksums-Sha256: d6b96325d47341884a73b51e516c8dd0b186ba2939afd8b09358c25b7ed2ca64 28924 libost-base-dev_2.9.2-2_amd64.deb 4d0959f6dc5fde3dcbdfb00a86d1699d985fe4d6b8845c5012f43f71f14d5f59 263500 libost-base2.9-dbgsym_2.9.2-2_amd64.deb 029a2b43ecb3f4f77586502253321aab1df7e2cf3c1fb1146cf6a662f6fa76f9 34816 libost-base2.9_2.9.2-2_amd64.deb fe701633f5848a3a10ff0560a728b1ceeef2097037037911e54b85f1f075b34a 16464 libost-bindings-dev_2.9.2-2_amd64.deb 35bd9e7a87a12522e2f2bd8606c827ddd6add8be21aeb35455aa785da6604bcd 1798000 libost-bindings2.9-dbgsym_2.9.2-2_amd64.deb ac84b33c987074a86491e78de10a4ddc1b7713835fff8604a2a59199832c3701 203732 libost-bindings2.9_2.9.2-2_amd64.deb aef03211edc64c5fa9fedf4bfd1d1976ae40afcfac051f3adbfc33a41a1f7852 23336 libost-conop-dev_2.9.2-2_amd64.deb d0fda10253eee9da574d736d5413212788c78c2910e57503b0b2f7534ada0ead 3040524 libost-conop2.9-dbgsym_2.9.2-2_amd64.deb c769a0a5f698f1a6f95fecdf310928971265b658a6022509c556361c018b105e 189000 libost-conop2.9_2.9.2-2_amd64.deb 56d2f64b9d799cf8d3081f74e3562734e7fb10fa6e6aaaf08e58c29ca66709af 18792 libost-db-dev_2.9.2-2_amd64.deb f0758d13382e49eb8600116e4565daba65d1088311b6944f41cca19638a05163 498288 libost-db2.9-dbgsym_2.9.2-2_amd64.deb 1a2722d45f333d487031732f741a302d4d5c3a85474f6981b7616ff34da8ca2f 45456 libost-db2.9_2.9.2-2_amd64.deb 7ac5e1b8123f97af4154edcfdf5c0b75fc80eca7775e9ad4a390599fd396873f 29908 libost-geom-dev_2.9.2-2_amd64.deb 0ae5f2a850fbab562eda33631568e118d0923da7e1c3a67024132428b0fcbdd0 871764 libost-geom2.9-dbgsym_2.9.2-2_amd64.deb 123fd2e2f475785e21a91f72086d15e50493d62411fa66577db9e3049361d05c 66384 libost-geom2.9_2.9.2-2_amd64.deb 72377102cdcc8cdb9986d29e1f5e60218fc846f18e17c42903b01c44bb4dac8c 68728 libost-gfx-dev_2.9.2-2_amd64.deb 868d253f7d705afecdee19c90958d3d1de12eb3ba48bf5bb5953433dfade20e9 9476908 libost-gfx2.9-dbgsym_2.9.2-2_amd64.deb a25ac5e0f3eadd30b771728534392529539c227b300aea59f2f8b227d8908694 432148 libost-gfx2.9_2.9.2-2_amd64.deb f626d2cf3230d8bdc2349fe1ae1c2dd2a78fa31194ad7fe18f107edd370c2247 54532 libost-gui-dev_2.9.2-2_amd64.deb d937abd2286bfd432f7075591af63442ce139e3a07086d2230ed7dfefc49d448 22130228 libost-gui2.9-dbgsym_2.9.2-2_amd64.deb feef6a14b41e154360de049307696b1c13ecb622ce76def9c28217ddb24703e1 506588 libost-gui2.9_2.9.2-2_amd64.deb 15156c89a06e4ccaddd2035cfe9fc70ddae6747c842a16f471c531d29798525a 30656 libost-img-alg-dev_2.9.2-2_amd64.deb f3283774b0be4c341b32a48c163005a802063037cfd2ccfa19fe884976dbd2c1 1868028 libost-img-alg2.9-dbgsym_2.9.2-2_amd64.deb 22fe5cd7991b29978c312581fbad0ac97ccabf280611643ee2c71ae140980323 169368 libost-img-alg2.9_2.9.2-2_amd64.deb fb84b5364d9b46ad798cb48fa75b000a8859303bcc1b6e728cf7598fef7065ae 44468 libost-img-dev_2.9.2-2_amd64.deb c466ae8f1c2977685e2ade02f50e4bc1fc80fb44f4e329d78024f6ab05a56d3a 1780700 libost-img2.9-dbgsym_2.9.2-2_amd64.deb 55b6824c244340f2a6f44d128b77a1ae73558f6c524abc746198f7b70ca6aade 143948 libost-img2.9_2.9.2-2_amd64.deb 01bc445d003da3bb22161341f42830734af6915d160c69563a3ae6c7f40e6c47 21720 libost-info-dev_2.9.2-2_amd64.deb f1f28d00b915f924a0d3f9c8f99f7cfe04b0529e15cd61d6b78d042b147fef20 2434972 libost-info2.9-dbgsym_2.9.2-2_amd64.deb 5726653dc96ceb212f85091ee5c30246b1d9f2dc01a9383558588cf633503ed7 167828 libost-info2.9_2.9.2-2_amd64.deb d5c222ce26d8a1b4b89c488be6339fbefe74b671e6b6162f3488f71dff58aa4d 53348 libost-io-dev_2.9.2-2_amd64.deb a73709d77974312d0e9df7ab42caa1f2e94db37ca99e2a48ac8be6e5a76ee76a 18131372 libost-io2.9-dbgsym_2.9.2-2_amd64.deb 980b7aae306ca5b5cd786645e587ee3842c6dfc3d1728b86e327f35df172420a 883456 libost-io2.9_2.9.2-2_amd64.deb 1aacab9955a8df2cbe8393e1c6ab72066d929199d089fddb1d8ac42412934da6 32500 libost-mol-alg-dev_2.9.2-2_amd64.deb 6260e60dc6c370b68b684f40015787b1b857c280da3254d9e20ec4fc67a0a3b7 9951932 libost-mol-alg2.9-dbgsym_2.9.2-2_amd64.deb 22921f7b8979be789a91570bb54a6d2115baefea83e3ced11f88e011bbaf5fc5 369500 libost-mol-alg2.9_2.9.2-2_amd64.deb 47e3c6efa5a6cc1948a6bd14463a029b44306a7fd13f52e57b2d5ac04de88efd 59236 libost-mol-dev_2.9.2-2_amd64.deb 801b83dc034aee7ef19ed7fbb76506fdab448b3b7d37facbab808830e8db1e58 29644 libost-mol-mm-dev_2.9.2-2_amd64.deb 39fc07c2db0c7625b06dec07c4d6a2424a84fcd3c780cee875feac3ff94de422 6413972 libost-mol-mm2.9-dbgsym_2.9.2-2_amd64.deb e68d819974b4930fbc35b0f8faf74e3c3e64283e04ec6a9104116120649d5243 299012 libost-mol-mm2.9_2.9.2-2_amd64.deb 428efd3314eefecc4032d41b67c6b16c949cac790505b88cb63e9bc4b26cf493 8032460 libost-mol2.9-dbgsym_2.9.2-2_amd64.deb 94fd66e09b959340c5d7a0ca3c57f6a3985dcc7db7729c3f09ad281a8fe2eb53 394904 libost-mol2.9_2.9.2-2_amd64.deb 69d877b61212ddc59e80d4bedb655b91c21de836b7f974a174bb183892003258 180052 libost-seq-alg-dev_2.9.2-2_amd64.deb a13fe79521ab442ff77a9a5967050309d93975830552a0c7a8f29056f3de291a 1841340 libost-seq-alg2.9-dbgsym_2.9.2-2_amd64.deb 3b0ce4ce434e1f4b2f6d7b3c2b2bf73d3cb561b40dbd4ce628add9c929e92297 254764 libost-seq-alg2.9_2.9.2-2_amd64.deb b90a62f5ae8df755444346104849edf6e55e8a5f32a131b6d0e05a3d48c5e155 25816 libost-seq-dev_2.9.2-2_amd64.deb 9fc3079f43ad4f9c279f308b32e6f62ccb9657897ae3266f51202a3f02a8750d 1204000 libost-seq2.9-dbgsym_2.9.2-2_amd64.deb 5d77ecb3077306afb94a247674b76fa64a204ad98e02ce94f4a0416a8f3ab57b 91044 libost-seq2.9_2.9.2-2_amd64.deb 09680637e79a1e24574ec3047e1ba08a864e5db7ad382770a7c09b0ff0d16e84 1991756 openstructure-dbgsym_2.9.2-2_amd64.deb 7bb0d15fdb582340608af876e70fc203477292145358cc06434f247ae132eefe 34009 openstructure_2.9.2-2_amd64.buildinfo f501c42bc146440e69403308def3b27ac2aea13891f89b863bbb520981fb0e49 93114888 openstructure_2.9.2-2_amd64.deb b1faf8b851d1472dac7215eb53261eaab20345f6278f693faee94473b6c98f69 65141384 python3-ost-dbgsym_2.9.2-2_amd64.deb 07ec6d070bcbb59586cc502d69ec5152cb880d389fba01333f73529d7762a7fc 3991776 python3-ost_2.9.2-2_amd64.deb Files: 7e43dfa25d218d7f2e8c3db5ae6b95fe 28924 libdevel optional libost-base-dev_2.9.2-2_amd64.deb 0b0d6100a34b2f356714aceeff746891 263500 debug optional libost-base2.9-dbgsym_2.9.2-2_amd64.deb c3b4c2c007942d747c50421ed707295c 34816 libs optional libost-base2.9_2.9.2-2_amd64.deb c0259a8c6f82c9cdc2136c58c354ff75 16464 libdevel optional libost-bindings-dev_2.9.2-2_amd64.deb 9381612ec9976886243618b444f7e373 1798000 debug optional libost-bindings2.9-dbgsym_2.9.2-2_amd64.deb 9c2ec305fa726e0fd8a015e0ae9bc3a3 203732 libs optional libost-bindings2.9_2.9.2-2_amd64.deb 67fd6848da06dfe601d2ea874cd0b6d7 23336 libdevel optional libost-conop-dev_2.9.2-2_amd64.deb 3f0ba455db3d7a96b22128931c09f129 3040524 debug optional libost-conop2.9-dbgsym_2.9.2-2_amd64.deb 1d851cbad09415bbeb431b6da77e6a80 189000 libs optional libost-conop2.9_2.9.2-2_amd64.deb 635d4eb5ba2013d4dd85506008a2e72e 18792 libdevel optional libost-db-dev_2.9.2-2_amd64.deb dd47efcc5a1f2864578c4bd571512ec3 498288 debug optional libost-db2.9-dbgsym_2.9.2-2_amd64.deb fa94fc4dc1acb32c7d454fa5b9b15749 45456 libs optional libost-db2.9_2.9.2-2_amd64.deb 1e596d39a651b46e313ff7071c3dd583 29908 libdevel optional libost-geom-dev_2.9.2-2_amd64.deb 8e7b556bb5577abeb5bf01aa9b717dad 871764 debug optional libost-geom2.9-dbgsym_2.9.2-2_amd64.deb e00457f1ea3f0dc69d11a07294f01017 66384 libs optional libost-geom2.9_2.9.2-2_amd64.deb 3a8e1a6bbf0b7b64c688ffc4a5a0b529 68728 libdevel optional libost-gfx-dev_2.9.2-2_amd64.deb cddb3680f73093658fb824eee1f4352a 9476908 debug optional libost-gfx2.9-dbgsym_2.9.2-2_amd64.deb 06c0166a874dda482eb8bd864c739c55 432148 libs optional libost-gfx2.9_2.9.2-2_amd64.deb fd79969814a49dc648817b837659870b 54532 libdevel optional libost-gui-dev_2.9.2-2_amd64.deb 4e866f8ea50b755e2311c75affce8137 22130228 debug optional libost-gui2.9-dbgsym_2.9.2-2_amd64.deb 64e6af62634e1ea7e664a0e4e3f7e024 506588 libs optional libost-gui2.9_2.9.2-2_amd64.deb dfdb58e218eccc81161f2e4dbdcb035e 30656 libdevel optional libost-img-alg-dev_2.9.2-2_amd64.deb fdeeacd0622da81a1ff10bb0c01d102a 1868028 debug optional libost-img-alg2.9-dbgsym_2.9.2-2_amd64.deb 04692e818af1282d98a7fe3f57cd8e1a 169368 libs optional libost-img-alg2.9_2.9.2-2_amd64.deb d1007b58be809794d497d895d8da2ce2 44468 libdevel optional libost-img-dev_2.9.2-2_amd64.deb c31a12cdcfbee295a9ce1a2a86b1c699 1780700 debug optional libost-img2.9-dbgsym_2.9.2-2_amd64.deb 5e2f6692d2e04cb1465e5d5fcd847d00 143948 libs optional libost-img2.9_2.9.2-2_amd64.deb 1f86eac748b0aedc5a7a78d979aa7052 21720 libdevel optional libost-info-dev_2.9.2-2_amd64.deb 328bdda8e3b263dd4385cc49ce35413c 2434972 debug optional libost-info2.9-dbgsym_2.9.2-2_amd64.deb 687258d5c1a3a8203cc9cdc850863d5d 167828 libs optional libost-info2.9_2.9.2-2_amd64.deb d35e9bd6fd6bf74e0990337b13af90ce 53348 libdevel optional libost-io-dev_2.9.2-2_amd64.deb 8d02d5b9a0a577cc5ee70a18bc060f06 18131372 debug optional libost-io2.9-dbgsym_2.9.2-2_amd64.deb bd799b92f8f23fa8f4954ae2d2b9f44a 883456 libs optional libost-io2.9_2.9.2-2_amd64.deb 50e8cbc134d18e07fed6d91f1a08eab5 32500 libdevel optional libost-mol-alg-dev_2.9.2-2_amd64.deb fa1eed6ce9c36361c48141e003acdd0c 9951932 debug optional libost-mol-alg2.9-dbgsym_2.9.2-2_amd64.deb 09115a3715ab49a7f214aa85d58ce137 369500 libs optional libost-mol-alg2.9_2.9.2-2_amd64.deb b5bd50c323d02a19c845082155bc3913 59236 libdevel optional libost-mol-dev_2.9.2-2_amd64.deb 14b4e93c4f50e39e780df228d35830c2 29644 libdevel optional libost-mol-mm-dev_2.9.2-2_amd64.deb d6cfa5a27413a8d95891ff608d821de6 6413972 debug optional libost-mol-mm2.9-dbgsym_2.9.2-2_amd64.deb 627600e0703b99007ea9f54e607e5b33 299012 libs optional libost-mol-mm2.9_2.9.2-2_amd64.deb 7d70f2f28cb5c9b57bdbfbbf56a82899 8032460 debug optional libost-mol2.9-dbgsym_2.9.2-2_amd64.deb f82d749bf207b6df79aed10782ef3a9e 394904 libs optional libost-mol2.9_2.9.2-2_amd64.deb 541e481c33d00a2bc3a2ec4d35eed363 180052 libdevel optional libost-seq-alg-dev_2.9.2-2_amd64.deb 9ce38a526575a3b8e94e8c512ee28ee4 1841340 debug optional libost-seq-alg2.9-dbgsym_2.9.2-2_amd64.deb c2dfa0de31969d70e081c5eca80f9f52 254764 libs optional libost-seq-alg2.9_2.9.2-2_amd64.deb 6c09d4840e020e99954bc6d0711f40b7 25816 libdevel optional libost-seq-dev_2.9.2-2_amd64.deb a2897d4c52d6115d35b0d5bfd276e959 1204000 debug optional libost-seq2.9-dbgsym_2.9.2-2_amd64.deb 870ed9d2ea7573e00babb77b1b0f5438 91044 libs optional libost-seq2.9_2.9.2-2_amd64.deb 7d2922d98547e284c1c0af0b3f8c429a 1991756 debug optional openstructure-dbgsym_2.9.2-2_amd64.deb 768ee7283c49e783920a5e9315e06f92 34009 science optional openstructure_2.9.2-2_amd64.buildinfo 2b0b73088390b7562537758252724370 93114888 science optional openstructure_2.9.2-2_amd64.deb 10cabb476191f6a87d1bc2138c8aed7b 65141384 debug optional python3-ost-dbgsym_2.9.2-2_amd64.deb 426a1d3851e16cef23d2ce2e5fb01d55 3991776 python optional python3-ost_2.9.2-2_amd64.deb Sun Mar 9 12:59:25 UTC 2025 I: diffoscope 289 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_31-35171.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/openstructure_2.9.2-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/openstructure_2.9.2-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/openstructure_2.9.2-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/b1/openstructure_2.9.2-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.6bCJozLZ/b2/openstructure_2.9.2-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 222ms CPU time consumed: 223ms Sun Mar 9 12:59:27 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists. Sun Mar 9 12:59:27 UTC 2025 I: openstructure from trixie built successfully and reproducibly on amd64. Sun Mar 9 12:59:28 UTC 2025 I: Submitting .buildinfo files to external archives: Sun Mar 9 12:59:28 UTC 2025 I: Submitting 36K b1/openstructure_2.9.2-2_amd64.buildinfo.asc Sun Mar 9 12:59:29 UTC 2025 I: Submitting 36K b2/openstructure_2.9.2-2_amd64.buildinfo.asc Sun Mar 9 12:59:30 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Mar 9 12:59:30 UTC 2025 I: Done submitting .buildinfo files. Sun Mar 9 12:59:30 UTC 2025 I: Removing signed openstructure_2.9.2-2_amd64.buildinfo.asc files: removed './b1/openstructure_2.9.2-2_amd64.buildinfo.asc' removed './b2/openstructure_2.9.2-2_amd64.buildinfo.asc'