Tue Mar 11 14:27:35 UTC 2025 I: starting to build pftools/trixie/amd64 on jenkins on '2025-03-11 14:27'
Tue Mar 11 14:27:35 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_26/34090/console.log
Tue Mar 11 14:27:35 UTC 2025 I: Downloading source for trixie/pftools=3.2.12-1
--2025-03-11 14:27:35-- http://deb.debian.org/debian/pool/main/p/pftools/pftools_3.2.12-1.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2068 (2.0K) [text/prs.lines.tag]
Saving to: ‘pftools_3.2.12-1.dsc’
0K .. 100% 340M=0s
2025-03-11 14:27:35 (340 MB/s) - ‘pftools_3.2.12-1.dsc’ saved [2068/2068]
Tue Mar 11 14:27:35 UTC 2025 I: pftools_3.2.12-1.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: pftools
Binary: pftools
Architecture: any-amd64
Version: 3.2.12-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/sib-swiss/pftools3
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/pftools
Vcs-Git: https://salsa.debian.org/med-team/pftools.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), gfortran, cmake, libfile-slurp-perl, libbz2-dev, libreadline-dev, libpcre2-dev, zlib1g-dev
Package-List:
pftools deb science optional arch=any-amd64
Checksums-Sha1:
d05153cea4500d300ab42df51cce7facfc529c95 44082519 pftools_3.2.12.orig.tar.gz
8b638269edcc49c5a0e5c8db73db6d5d530e2d55 7188 pftools_3.2.12-1.debian.tar.xz
Checksums-Sha256:
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b9fcbcfbfd7fab9bd2897b9abf3d8a46809e2e8396f65e0ff0080d5bcfad4e3f 7188 pftools_3.2.12-1.debian.tar.xz
Files:
3ccaf66814f939ce81de752b51afea07 44082519 pftools_3.2.12.orig.tar.gz
4dbdea82e2c6f7dba1a14877ca59dea4 7188 pftools_3.2.12-1.debian.tar.xz
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Tue Mar 11 14:27:35 UTC 2025 I: Checking whether the package is not for us
Tue Mar 11 14:27:35 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net.
Tue Mar 11 14:27:35 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net.
Tue Mar 11 14:32:38 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Mon Apr 13 08:50:34 -12 2026
I: pbuilder-time-stamp: 1776113434
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [pftools_3.2.12-1.dsc]
I: copying [./pftools_3.2.12.orig.tar.gz]
I: copying [./pftools_3.2.12-1.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./pftools_3.2.12-1.dsc: unsupported subcommand
dpkg-source: info: extracting pftools in pftools-3.2.12
dpkg-source: info: unpacking pftools_3.2.12.orig.tar.gz
dpkg-source: info: unpacking pftools_3.2.12-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling.patch
dpkg-source: info: applying fix_perl_interpreter.patch
dpkg-source: info: applying destdir_for_examples.patch
dpkg-source: info: applying hardening.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/398247/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 '
DISTRIBUTION='trixie'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='f4ea0fcc76e34aa69ca7e3826fccfd6b'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='398247'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/pbuilderrc_rt50 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/b1 --logfile b1/build.log pftools_3.2.12-1.dsc'
SUDO_GID='110'
SUDO_UID='105'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://213.165.73.152:3128'
I: uname -a
Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/398247/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), gfortran, cmake, libfile-slurp-perl, libbz2-dev, libreadline-dev, libpcre2-dev, zlib1g-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19800 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on gfortran; however:
Package gfortran is not installed.
pbuilder-satisfydepends-dummy depends on cmake; however:
Package cmake is not installed.
pbuilder-satisfydepends-dummy depends on libfile-slurp-perl; however:
Package libfile-slurp-perl is not installed.
pbuilder-satisfydepends-dummy depends on libbz2-dev; however:
Package libbz2-dev is not installed.
pbuilder-satisfydepends-dummy depends on libreadline-dev; however:
Package libreadline-dev is not installed.
pbuilder-satisfydepends-dummy depends on libpcre2-dev; however:
Package libpcre2-dev is not installed.
pbuilder-satisfydepends-dummy depends on zlib1g-dev; however:
Package zlib1g-dev is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libbz2-dev{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-slurp-perl{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} readline-common{a} sensible-utils{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget
0 packages upgraded, 78 newly installed, 0 to remove and 0 not upgraded.
Need to get 57.5 MB of archives. After unpacking 205 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get: 2 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get: 3 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 4 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 5 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 6 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 7 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 8 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 9 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 10 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 11 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 12 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 13 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 14 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB]
Get: 15 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB]
Get: 16 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 17 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB]
Get: 18 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 19 http://deb.debian.org/debian trixie/main amd64 cmake-data all 3.31.6-1 [2268 kB]
Get: 20 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 21 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB]
Get: 22 http://deb.debian.org/debian trixie/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB]
Get: 23 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 24 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB]
Get: 25 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get: 26 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB]
Get: 27 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 28 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB]
Get: 29 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB]
Get: 30 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 31 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB]
Get: 32 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get: 33 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get: 34 http://deb.debian.org/debian trixie/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB]
Get: 35 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 36 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get: 37 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 38 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 39 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 40 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 41 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 42 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 43 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 44 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.12.1-3 [369 kB]
Get: 45 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 46 http://deb.debian.org/debian trixie/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB]
Get: 47 http://deb.debian.org/debian trixie/main amd64 librhash1 amd64 1.4.5-1 [132 kB]
Get: 48 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB]
Get: 49 http://deb.debian.org/debian trixie/main amd64 cmake amd64 3.31.6-1 [12.0 MB]
Get: 50 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 51 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB]
Get: 52 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 53 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 54 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 55 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 56 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 57 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 58 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 59 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 60 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 61 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB]
Get: 62 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB]
Get: 63 http://deb.debian.org/debian trixie/main amd64 libgfortran-14-dev amd64 14.2.0-17 [879 kB]
Get: 64 http://deb.debian.org/debian trixie/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17 [11.7 MB]
Get: 65 http://deb.debian.org/debian trixie/main amd64 gfortran-14 amd64 14.2.0-17 [14.0 kB]
Get: 66 http://deb.debian.org/debian trixie/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B]
Get: 67 http://deb.debian.org/debian trixie/main amd64 gfortran amd64 4:14.2.0-1 [1436 B]
Get: 68 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB]
Get: 69 http://deb.debian.org/debian trixie/main amd64 libfile-slurp-perl all 9999.32-2 [26.7 kB]
Get: 70 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.5+20250216-1 [105 kB]
Get: 71 http://deb.debian.org/debian trixie/main amd64 libncurses-dev amd64 6.5+20250216-1 [353 kB]
Get: 72 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB]
Get: 73 http://deb.debian.org/debian trixie/main amd64 libpcre2-32-0 amd64 10.45-1 [268 kB]
Get: 74 http://deb.debian.org/debian trixie/main amd64 libpcre2-posix3 amd64 10.45-1 [63.5 kB]
Get: 75 http://deb.debian.org/debian trixie/main amd64 libpcre2-dev amd64 10.45-1 [853 kB]
Get: 76 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 77 http://deb.debian.org/debian trixie/main amd64 libreadline-dev amd64 8.2-6 [153 kB]
Get: 78 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Fetched 57.5 MB in 2s (33.7 MB/s)
Preconfiguring packages ...
Selecting previously unselected package libproc2-0:amd64.
(Reading database ...
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(Reading database ... 19800 files and directories currently installed.)
Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_amd64.deb ...
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Reading package lists...
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-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/pftools-3.2.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pftools_3.2.12-1_source.changes
dpkg-buildpackage: info: source package pftools
dpkg-buildpackage: info: source version 3.2.12-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Nilesh Patra <nilesh@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
dh_auto_clean
rm -rf data/test.*
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12'
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
if [ ! -e src/C/config.h.cmake ] ; then cp -a debian/missing-sources/config.h.cmake src/C/ ; fi
dh_auto_configure
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu ..
-- +--------------------------------------------------------------------+
-- | PfTools v3.2.12 |
-- +--------------------------------------------------------------------+
-- | (C) Copyright SIB Swiss Institute of Bioinformatics |
-- | Thierry Schuepbach (projects@vital-it.ch) |
-- | |
-- | PfTools is available from |
-- | https://github.com/sib-swiss/pftools3 |
-- | under the GPL v2. See LICENSE. |
-- | |
-- +--------------------------------------------------------------------+
CMake Deprecation Warning at CMakeLists.txt:31 (CMAKE_MINIMUM_REQUIRED):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
-- The Fortran compiler identification is GNU 14.2.0
-- The C compiler identification is GNU 14.2.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/f95 - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Compilation on architecture x86_64.
-- Performing Test HANDLE_SSE
-- Performing Test HANDLE_SSE - Success
-- Performing Test HANDLE_SSE2
-- Performing Test HANDLE_SSE2 - Success
-- testing flag -msse4.1...
-- Performing Test HANDLE_SSE41
-- Performing Test HANDLE_SSE41 - Success
-- Performing Test HANDLE_C99
-- Performing Test HANDLE_C99 - Success
-- Add -std=c99 to C compiler options
-- Add SSE2 to C compiler options
-- Performing Test MS_EXTENSION
-- Performing Test MS_EXTENSION - Success
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Found Perl: /usr/bin/perl (found version "5.40.1")
-- Perl found - full test suite usable
-- Found PCRE2: /usr/lib/x86_64-linux-gnu/libpcre2-8.so
-- Looking for include file emmintrin.h
-- Looking for include file emmintrin.h - found
-- Looking for include file smmintrin.h
-- Looking for include file smmintrin.h - found
-- Looking for include file mm_malloc.h
-- Looking for include file mm_malloc.h - found
-- Looking for include file alloca.h
-- Looking for include file alloca.h - found
-- Check Perl script syntax
compare_2_profiles.pl
- syntax OK
fasta_to_fastq.pl
- syntax OK
make_iupac_cmp.pl
- syntax OK
ps_scan.pl
- syntax OK
scramble_fasta.pl
- syntax OK
sort_fasta.pl
- syntax OK
split_profile_file.pl
- syntax OK
--
-- PfTools Software Suite configuration summary:
--
-- System name ......................: Linux
-- Build type .......................: None
--
-- Integer format ...................: 16 bits
--
-- Install prefix .................. : /usr
-- C compiler ...................... : /usr/bin/cc
-- Fortran compiler ................ : /usr/bin/f95
-- C compiler flags ................ : -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions
-- C compiler SSE2 flag. ........... : -msse2
-- C compiler SSE 4.1 flag.......... : -msse4.1
-- Fortran compiler flags .......... : -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection
--
-- Use file memory mapping ..........: ON
-- Use thread affinity setting ......: ON
--
-- Build shared libs ............... : OFF
-- Build static libs ............... : OFF
-- Build static executables......... : OFF
--
-- Link with pcre2 ................. : ON
--
-- Configuring done (6.2s)
-- Generating done (0.1s)
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
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make -f src/Fortran/CMakeFiles/ptof.dir/build.make src/Fortran/CMakeFiles/ptof.dir/build
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/utils/CMakeFiles/PROFILES.dir/profile.c.o -MF CMakeFiles/PROFILES.dir/profile.c.o.d -o CMakeFiles/PROFILES.dir/profile.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/profile.c
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/utils/CMakeFiles/SEQUENCES_EXTRA.dir/pam.c.o -MF CMakeFiles/SEQUENCES_EXTRA.dir/pam.c.o.d -o CMakeFiles/SEQUENCES_EXTRA.dir/pam.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/pam.c
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_PFPAM -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfpam.dir/utils/io.c.o -MF CMakeFiles/pfpam.dir/utils/io.c.o.d -o CMakeFiles/pfpam.dir/utils/io.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/io.c
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/6ft.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/6ft.dir/depend.internal".
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/6ft.dir/depend.internal".
[ 17%] Building C object src/C/sse2/CMakeFiles/SSE2.dir/xalip_sse2.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/sse2 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -msse2 -MD -MT src/C/sse2/CMakeFiles/SSE2.dir/xalip_sse2.c.o -MF CMakeFiles/SSE2.dir/xalip_sse2.c.o.d -o CMakeFiles/SSE2.dir/xalip_sse2.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/sse2/xalip_sse2.c
[ 22%] Building C object src/C/sse2/CMakeFiles/SSE2.dir/xalit_sse2.c.o
[ 22%] Building C object src/C/sse41/CMakeFiles/SSE41.dir/xali1_sse41.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/sse41 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -msse4.1 -MD -MT src/C/sse41/CMakeFiles/SSE41.dir/xali1_sse41.c.o -MF CMakeFiles/SSE41.dir/xali1_sse41.c.o.d -o CMakeFiles/SSE41.dir/xali1_sse41.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/sse41/xali1_sse41.c
Scanning dependencies of target 6ft
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/sse2 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -msse2 -MD -MT src/C/sse2/CMakeFiles/SSE2.dir/xalit_sse2.c.o -MF CMakeFiles/SSE2.dir/xalit_sse2.c.o.d -o CMakeFiles/SSE2.dir/xalit_sse2.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/sse2/xalit_sse2.c
[ 23%] Building C object src/C/sse41/CMakeFiles/SSE41.dir/xalip_sse41.c.o
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfmake.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfmake.dir/depend.internal".
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfmake.dir/depend.internal".
[ 25%] Building C object src/C/sse41/CMakeFiles/SSE41.dir/xalit_sse41.c.o
[ 26%] Building C object src/C/CMakeFiles/pfpam.dir/utils/random.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_PFPAM -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfpam.dir/utils/random.c.o -MF CMakeFiles/pfpam.dir/utils/random.c.o.d -o CMakeFiles/pfpam.dir/utils/random.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/random.c
[ 28%] Building C object src/C/CMakeFiles/pfpam.dir/utils/pam.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/sse41 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -msse4.1 -MD -MT src/C/sse41/CMakeFiles/SSE41.dir/xalip_sse41.c.o -MF CMakeFiles/SSE41.dir/xalip_sse41.c.o.d -o CMakeFiles/SSE41.dir/xalip_sse41.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/sse41/xalip_sse41.c
[ 29%] Building Fortran object src/Fortran/CMakeFiles/htop.dir/htop.f.o
[ 31%] Building C object src/C/CMakeFiles/pfsplit.dir/prg/split.c.o
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscan.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscan.dir/depend.internal".
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscan.dir/depend.internal".
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/Fortran/CMakeFiles/6ft.dir/build.make src/Fortran/CMakeFiles/6ft.dir/build
[ 32%] Building C object src/Fortran/CMakeFiles/gtop.dir/io.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_PFPAM -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfpam.dir/utils/pam.c.o -MF CMakeFiles/pfpam.dir/utils/pam.c.o.d -o CMakeFiles/pfpam.dir/utils/pam.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/pam.c
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfsplit.dir/prg/split.c.o -MF CMakeFiles/pfsplit.dir/prg/split.c.o.d -o CMakeFiles/pfsplit.dir/prg/split.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/prg/split.c
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -MD -MT src/Fortran/CMakeFiles/gtop.dir/io.c.o -MF CMakeFiles/gtop.dir/io.c.o.d -o CMakeFiles/gtop.dir/io.c.o -c /build/reproducible-path/pftools-3.2.12/src/Fortran/io.c
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfsearch.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfsearch.dir/depend.internal".
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cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/htop.f -o CMakeFiles/htop.dir/htop.f.o
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscale.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscale.dir/depend.internal".
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/pfscale.dir/depend.internal".
Scanning dependencies of target pfmake
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/sse41 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -msse4.1 -MD -MT src/C/sse41/CMakeFiles/SSE41.dir/xalit_sse41.c.o -MF CMakeFiles/SSE41.dir/xalit_sse41.c.o.d -o CMakeFiles/SSE41.dir/xalit_sse41.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/sse41/xalit_sse41.c
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
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[ 35%] Building Fortran object src/Fortran/CMakeFiles/gtop.dir/gtop.f.o
make -f src/Fortran/CMakeFiles/pfmake.dir/build.make src/Fortran/CMakeFiles/pfmake.dir/build
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[ 34%] Building Fortran object src/Fortran/CMakeFiles/2ft.dir/2ft.f.o
[ 37%] Building Fortran object src/Fortran/CMakeFiles/ptoh.dir/ptoh.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/ptoh.f -o CMakeFiles/ptoh.dir/ptoh.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/2ft.f -o CMakeFiles/2ft.dir/2ft.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/gtop.f -o CMakeFiles/gtop.dir/gtop.f.o
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Scanning dependencies of target pfscale
Dependee "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/psa2msa.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/CMakeFiles/psa2msa.dir/depend.internal".
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cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/pfw.f -o CMakeFiles/pfw.dir/pfw.f.o
Scanning dependencies of target psa2msa
[ 41%] Building C object src/Fortran/CMakeFiles/pfw.dir/io.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -c /build/reproducible-path/pftools-3.2.12/src/Fortran/rq0.f -o CMakeFiles/quantile.dir/rq0.f.o
Scanning dependencies of target pfscan
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/Fortran/CMakeFiles/psa2msa.dir/build.make src/Fortran/CMakeFiles/psa2msa.dir/build
Scanning dependencies of target pfsearch
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -MD -MT src/Fortran/CMakeFiles/pfw.dir/io.c.o -MF CMakeFiles/pfw.dir/io.c.o.d -o CMakeFiles/pfw.dir/io.c.o -c /build/reproducible-path/pftools-3.2.12/src/Fortran/io.c
[ 43%] Building Fortran object src/Fortran/CMakeFiles/ptof.dir/ptof.f.o
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/Fortran/CMakeFiles/pfscale.dir/build.make src/Fortran/CMakeFiles/pfscale.dir/build
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/Fortran/CMakeFiles/pfscan.dir/build.make src/Fortran/CMakeFiles/pfscan.dir/build
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/Fortran/CMakeFiles/pfsearch.dir/build.make src/Fortran/CMakeFiles/pfsearch.dir/build
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/ptof.f -o CMakeFiles/ptof.dir/ptof.f.o
[ 44%] Building Fortran object src/Fortran/CMakeFiles/6ft.dir/6ft.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/6ft.f -o CMakeFiles/6ft.dir/6ft.f.o
[ 46%] Building Fortran object src/Fortran/CMakeFiles/pfscale.dir/pfscale.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/pfscale.f -o CMakeFiles/pfscale.dir/pfscale.f.o
[ 47%] Building Fortran object src/Fortran/CMakeFiles/pfmake.dir/pfmake.f.o
[ 49%] Building Fortran object src/Fortran/CMakeFiles/pfscan.dir/pfscan.f.o
[ 50%] Building C object src/Fortran/CMakeFiles/psa2msa.dir/io.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/pfscan.f -o CMakeFiles/pfscan.dir/pfscan.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/pfmake.f -o CMakeFiles/pfmake.dir/pfmake.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -MD -MT src/Fortran/CMakeFiles/psa2msa.dir/io.c.o -MF CMakeFiles/psa2msa.dir/io.c.o.d -o CMakeFiles/psa2msa.dir/io.c.o -c /build/reproducible-path/pftools-3.2.12/src/Fortran/io.c
[ 52%] Building Fortran object src/Fortran/CMakeFiles/pfsearch.dir/pfsearch.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/pfsearch.f -o CMakeFiles/pfsearch.dir/pfsearch.f.o
[ 53%] Building Fortran object src/Fortran/CMakeFiles/psa2msa.dir/psa2msa.f.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -fno-automatic -std=legacy -c /build/reproducible-path/pftools-3.2.12/src/Fortran/psa2msa.f -o CMakeFiles/psa2msa.dir/psa2msa.f.o
rhmmer2.f:265:17:
Warning: Array reference at (1) out of bounds (47 > 46) in loop beginning at (2)
rhmmer2.f:265:29:
Warning: Array reference at (1) out of bounds (47 > 46) in loop beginning at (2)
rhmmer2.f:274:17:
Warning: Array reference at (1) out of bounds (47 > 27) in loop beginning at (2)
rhmmer2.f:274:29:
Warning: Array reference at (1) out of bounds (47 > 27) in loop beginning at (2)
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c: In function 'InitRegExFromString':
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c:88:57: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
88 | fprintf(stderr, "pcre2_compile failed (offset: %d), %s\n", erroffset, error);
| ~^ ~~~~~~~~~
| | |
| int size_t {aka long unsigned int}
| %ld
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c:88:62: warning: format '%s' expects argument of type 'char *', but argument 4 has type 'int' [-Wformat=]
88 | fprintf(stderr, "pcre2_compile failed (offset: %d), %s\n", erroffset, error);
| ~^ ~~~~~
| | |
| char * int
| %d
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c: In function 'InitRegExFromProfile':
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c:173:57: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
173 | fprintf(stderr, "pcre2_compile failed (offset: %d), %s\nProfile ID: %s\npattern: %s\n", erroffset, error,
| ~^ ~~~~~~~~~
| | |
| int size_t {aka long unsigned int}
| %ld
/build/reproducible-path/pftools-3.2.12/src/C/utils/pfregexp.c:173:62: warning: format '%s' expects argument of type 'char *', but argument 4 has type 'int' [-Wformat=]
173 | fprintf(stderr, "pcre2_compile failed (offset: %d), %s\nProfile ID: %s\npattern: %s\n", erroffset, error,
| ~^ ~~~~~
| | |
| char * int
| %d
[ 55%] Linking C executable pfsplit
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfsplit.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfsplit.dir/link.d CMakeFiles/pfsplit.dir/prg/split.c.o -o pfsplit
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 55%] Built target pfsplit
[ 56%] Linking Fortran executable 6ft
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/6ft.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 56%] Built target REGEXP
make -f src/C/CMakeFiles/pfdump.dir/build.make src/C/CMakeFiles/pfdump.dir/depend
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pftools-3.2.12 /build/reproducible-path/pftools-3.2.12/src/C /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/CMakeFiles/pfdump.dir/DependInfo.cmake "--color="
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/6ft.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/6ft.dir/6ft.f.o -o 6ft
[ 56%] Built target SEQUENCES_EXTRA
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
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make -f src/C/CMakeFiles/pfdump.dir/build.make src/C/CMakeFiles/pfdump.dir/build
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[ 58%] Linking Fortran executable 2ft
[ 56%] Built target 6ft
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/2ft.dir/link.txt --verbose=1
[ 59%] Building C object src/C/CMakeFiles/pfdump.dir/utils/io.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_TEST -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfdump.dir/utils/io.c.o -MF CMakeFiles/pfdump.dir/utils/io.c.o.d -o CMakeFiles/pfdump.dir/utils/io.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/io.c
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/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/2ft.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/2ft.dir/2ft.f.o -o 2ft
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[ 59%] Built target SEQUENCES
make -f src/C/CMakeFiles/pfindex.dir/build.make src/C/CMakeFiles/pfindex.dir/depend
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pftools-3.2.12 /build/reproducible-path/pftools-3.2.12/src/C /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/CMakeFiles/pfindex.dir/DependInfo.cmake "--color="
[ 59%] Built target 2ft
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make -f src/C/CMakeFiles/pfindex.dir/build.make src/C/CMakeFiles/pfindex.dir/build
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 61%] Building C object src/C/CMakeFiles/pfindex.dir/prg/pfindex.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfindex.dir/prg/pfindex.c.o -MF CMakeFiles/pfindex.dir/prg/pfindex.c.o.d -o CMakeFiles/pfindex.dir/prg/pfindex.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/prg/pfindex.c
[ 62%] Linking Fortran executable psa2msa
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/psa2msa.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 62%] Built target SYSTEM
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 62%] Built target quantile
make -f src/C/utils/CMakeFiles/CALIBRATION.dir/build.make src/C/utils/CMakeFiles/CALIBRATION.dir/depend
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pftools-3.2.12 /build/reproducible-path/pftools-3.2.12/src/C/utils /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils/CMakeFiles/CALIBRATION.dir/DependInfo.cmake "--color="
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/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/psa2msa.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/psa2msa.dir/io.c.o CMakeFiles/psa2msa.dir/psa2msa.f.o -o psa2msa
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make -f src/C/utils/CMakeFiles/CALIBRATION.dir/build.make src/C/utils/CMakeFiles/CALIBRATION.dir/build
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 62%] Built target psa2msa
[ 62%] Built target SSE41
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfindex.c: In function 'Usage':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfindex.c:84:53: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
84 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n", stream);
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfindex.c:84:69: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
84 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n", stream);
| ^~~~~~~~
[ 64%] Building C object src/C/utils/CMakeFiles/CALIBRATION.dir/random.c.o
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[ 65%] Building C object src/C/utils/CMakeFiles/CALIBRATION.dir/histogram.c.o
[ 68%] Building C object src/C/utils/CMakeFiles/CALIBRATION.dir/generatesequences.c.o
[ 67%] Building C object src/C/utils/CMakeFiles/CALIBRATION.dir/quantileregression.c.o
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cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/utils/CMakeFiles/CALIBRATION.dir/quantileregression.c.o -MF CMakeFiles/CALIBRATION.dir/quantileregression.c.o.d -o CMakeFiles/CALIBRATION.dir/quantileregression.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/quantileregression.c
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/utils && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/utils/CMakeFiles/CALIBRATION.dir/generatesequences.c.o -MF CMakeFiles/CALIBRATION.dir/generatesequences.c.o.d -o CMakeFiles/CALIBRATION.dir/generatesequences.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/generatesequences.c
[ 68%] Built target SSE2
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/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfindex.dir/link.d CMakeFiles/pfindex.dir/prg/pfindex.c.o utils/CMakeFiles/SEQUENCES.dir/ReadSequence.c.o -o pfindex
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/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfdump.dir/link.d CMakeFiles/pfdump.dir/utils/io.c.o CMakeFiles/REGEXP.dir/utils/pfregexp.c.o -o pfdump /usr/lib/x86_64-linux-gnu/libpcre2-8.so
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/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfpam.dir/link.d CMakeFiles/pfpam.dir/utils/pam.c.o CMakeFiles/pfpam.dir/utils/io.c.o CMakeFiles/pfpam.dir/utils/random.c.o -o pfpam
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[ 74%] Built target pfpam
[ 76%] Linking Fortran executable gtop
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/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/gtop.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/gtop.dir/gtop.f.o CMakeFiles/gtop.dir/io.c.o -o gtop
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 76%] Built target PROFILES
make -f src/C/CMakeFiles/pfsearchV3.dir/build.make src/C/CMakeFiles/pfsearchV3.dir/depend
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make -f src/C/CMakeFiles/pfemit.dir/build.make src/C/CMakeFiles/pfemit.dir/depend
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make -f src/C/CMakeFiles/pfsearchV3.dir/build.make src/C/CMakeFiles/pfsearchV3.dir/build
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[ 77%] Building C object src/C/CMakeFiles/pfsearchV3.dir/prg/pfsearch.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D__USE_AFFINITY__ -I/usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfsearchV3.dir/prg/pfsearch.c.o -MF CMakeFiles/pfsearchV3.dir/prg/pfsearch.c.o.d -o CMakeFiles/pfsearchV3.dir/prg/pfsearch.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c
[ 79%] Building C object src/C/CMakeFiles/pfscanV3.dir/prg/pfscan.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D__USE_AFFINITY__ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfscanV3.dir/prg/pfscan.c.o -MF CMakeFiles/pfscanV3.dir/prg/pfscan.c.o.d -o CMakeFiles/pfscanV3.dir/prg/pfscan.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c
[ 80%] Building C object src/C/CMakeFiles/pfemit.dir/utils/random.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_PFEMIT -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfemit.dir/utils/random.c.o -MF CMakeFiles/pfemit.dir/utils/random.c.o.d -o CMakeFiles/pfemit.dir/utils/random.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/random.c
[ 82%] Building C object src/C/CMakeFiles/pfemit.dir/utils/generatesequences.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D_PFEMIT -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfemit.dir/utils/generatesequences.c.o -MF CMakeFiles/pfemit.dir/utils/generatesequences.c.o.d -o CMakeFiles/pfemit.dir/utils/generatesequences.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/utils/generatesequences.c
Scanning dependencies of target pfcalibrateV3
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 83%] Building C object src/C/CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cc -D__USE_AFFINITY__ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/ -I /build/reproducible-path/pftools-3.2.12/src/C/include/ -MD -MT src/C/CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o -MF CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o.d -o CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o -c /build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c: In function 'Usage':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c:154:41: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
154 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n",
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c:154:57: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
154 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n",
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c: In function 'main':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c:368:10: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
368 | fputs(HEADER
| ^~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c:26:30: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
26 | "| Built on " __DATE__ " at " __TIME__ ". |\n"
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfscan.c:368:10: note: in expansion of macro 'HEADER'
368 | fputs(HEADER
| ^~~~~~
[ 83%] Built target gtop
[ 85%] Linking Fortran executable ptoh
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/ptoh.dir/link.txt --verbose=1
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c: In function 'Usage':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c:191:53: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
191 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n", OutputPrintWidth);
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c:191:69: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
191 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n", OutputPrintWidth);
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c: In function 'main':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c:494:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
494 | fputs(HEADER
| ^~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c:33:15: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
33 | "| Built on " __DATE__ " at " __TIME__ ". |\n"
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfsearch.c:494:23: note: in expansion of macro 'HEADER'
494 | fputs(HEADER
| ^~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c: In function 'Usage':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c:287:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
287 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n",
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c:287:93: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
287 | " Version " PF_VERSION " built on " __DATE__ " at " __TIME__ ".\n",
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c: In function 'main':
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c:963:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
963 | fputs(HEADER
| ^~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c:49:15: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
49 | "| Built on " __DATE__ " at " __TIME__ ". |\n"
| ^~~~~~~~
/build/reproducible-path/pftools-3.2.12/src/C/prg/pfcalibrate.c:963:23: note: in expansion of macro 'HEADER'
963 | fputs(HEADER
| ^~~~~~
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/ptoh.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/ptoh.dir/ptoh.f.o -o ptoh
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 85%] Built target ptoh
[ 86%] Linking C executable pfemit
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfemit.dir/link.txt --verbose=1
[ 88%] Linking Fortran executable htop
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/htop.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfemit.dir/link.d CMakeFiles/pfemit.dir/utils/generatesequences.c.o CMakeFiles/pfemit.dir/utils/random.c.o utils/CMakeFiles/PROFILES.dir/io.c.o utils/CMakeFiles/PROFILES.dir/profile.c.o utils/CMakeFiles/PROFILES.dir/Normalization.c.o -o pfemit -lm
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 88%] Built target pfemit
[ 89%] Linking Fortran executable pfscale
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/htop.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/htop.dir/htop.f.o -o htop
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfscale.dir/link.txt --verbose=1
[ 89%] Built target htop
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfscale.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/pfscale.dir/pfscale.f.o -o pfscale
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 89%] Built target pfscale
[ 91%] Linking C executable pfscanV3
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfscanV3.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfscanV3.dir/link.d CMakeFiles/pfscanV3.dir/prg/pfscan.c.o utils/CMakeFiles/PROFILES.dir/io.c.o utils/CMakeFiles/PROFILES.dir/profile.c.o utils/CMakeFiles/PROFILES.dir/Normalization.c.o utils/CMakeFiles/SEQUENCES.dir/ReadSequence.c.o CMakeFiles/REGEXP.dir/utils/pfregexp.c.o sse2/CMakeFiles/SSE2.dir/heuristic_sse2.c.o sse2/CMakeFiles/SSE2.dir/xali1_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalip_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalit_sse2.c.o sse41/CMakeFiles/SSE41.dir/heuristic_sse41.c.o sse41/CMakeFiles/SSE41.dir/xali1_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalip_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalit_sse41.c.o utils/CMakeFiles/OUTPUT_FORMAT.dir/output.c.o utils/CMakeFiles/SYSTEM.dir/system.c.o -o pfscanV3 /usr/lib/x86_64-linux-gnu/libpcre2-8.so -lm
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 91%] Built target pfscanV3
[ 92%] Linking Fortran executable ptof
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/ptof.dir/link.txt --verbose=1
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/ptof.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/ptof.dir/ptof.f.o -o ptof
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 92%] Built target ptof
[ 94%] Linking C executable pfcalibrateV3
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfcalibrateV3.dir/link.txt --verbose=1
/usr/bin/ld: CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o: in function `main':
./obj-x86_64-linux-gnu/src/C/./src/C/prg/pfcalibrate.c:1383:(.text.startup+0x174d): warning: the use of `tempnam' is dangerous, better use `mkstemp'
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfcalibrateV3.dir/link.d CMakeFiles/pfcalibrateV3.dir/prg/pfcalibrate.c.o sse2/CMakeFiles/SSE2.dir/heuristic_sse2.c.o sse2/CMakeFiles/SSE2.dir/xali1_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalip_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalit_sse2.c.o sse41/CMakeFiles/SSE41.dir/heuristic_sse41.c.o sse41/CMakeFiles/SSE41.dir/xali1_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalip_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalit_sse41.c.o utils/CMakeFiles/PROFILES.dir/io.c.o utils/CMakeFiles/PROFILES.dir/profile.c.o utils/CMakeFiles/PROFILES.dir/Normalization.c.o utils/CMakeFiles/SEQUENCES_EXTRA.dir/pam.c.o utils/CMakeFiles/SEQUENCES.dir/ReadSequence.c.o utils/CMakeFiles/CALIBRATION.dir/random.c.o utils/CMakeFiles/CALIBRATION.dir/histogram.c.o utils/CMakeFiles/CALIBRATION.dir/quantileregression.c.o utils/CMakeFiles/CALIBRATION.dir/generatesequences.c.o ../Fortran/CMakeFiles/quantile.dir/rq0.f.o utils/CMakeFiles/SYSTEM.dir/system.c.o -o pfcalibrateV3 -lm -lgfortran -lm -lquadmath -lm
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 94%] Built target pfcalibrateV3
[ 95%] Linking C executable pfsearchV3
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfsearchV3.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -msse2 -fms-extensions -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfsearchV3.dir/link.d CMakeFiles/pfsearchV3.dir/prg/pfsearch.c.o utils/CMakeFiles/PROFILES.dir/io.c.o utils/CMakeFiles/PROFILES.dir/profile.c.o utils/CMakeFiles/PROFILES.dir/Normalization.c.o utils/CMakeFiles/SEQUENCES.dir/ReadSequence.c.o sse2/CMakeFiles/SSE2.dir/heuristic_sse2.c.o sse2/CMakeFiles/SSE2.dir/xali1_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalip_sse2.c.o sse2/CMakeFiles/SSE2.dir/xalit_sse2.c.o sse41/CMakeFiles/SSE41.dir/heuristic_sse41.c.o sse41/CMakeFiles/SSE41.dir/xali1_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalip_sse41.c.o sse41/CMakeFiles/SSE41.dir/xalit_sse41.c.o utils/CMakeFiles/OUTPUT_FORMAT.dir/output.c.o CMakeFiles/REGEXP.dir/utils/pfregexp.c.o utils/CMakeFiles/SYSTEM.dir/system.c.o -o pfsearchV3 /usr/lib/x86_64-linux-gnu/libpcre2-8.so -lm
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 95%] Built target pfsearchV3
[ 97%] Linking Fortran executable pfmake
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfmake.dir/link.txt --verbose=1
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfmake.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/pfmake.dir/pfmake.f.o -o pfmake
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 97%] Built target pfmake
[ 98%] Linking Fortran executable pfscan
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfscan.dir/link.txt --verbose=1
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfscan.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/pfscan.dir/pfscan.f.o -o pfscan
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[ 98%] Built target pfscan
[100%] Linking Fortran executable pfsearch
cd /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/pfsearch.dir/link.txt --verbose=1
/usr/bin/f95 -Wl,--enable-new-dtags -Wl,-z,relro -Wl,-z,now -lpcre2-8 -Wl,--dependency-file=CMakeFiles/pfsearch.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/pftools-3.2.12=. -fstack-protector-strong -fstack-clash-protection -fcf-protection CMakeFiles/pfsearch.dir/pfsearch.f.o -o pfsearch
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
[100%] Built target pfsearch
make[2]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
dh_auto_test --no-parallel
cd obj-x86_64-linux-gnu && make -j1 test ARGS\+=--verbose ARGS\+=-j1
make[2]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j1
UpdateCTestConfiguration from :/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/DartConfiguration.tcl
UpdateCTestConfiguration from :/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/DartConfiguration.tcl
Parse Config file:/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/DartConfiguration.tcl
Test project /build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
Start 1: execute_test_V2.sh
1: Test command: /usr/bin/sh "-ve" "test_V2.sh"
1: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
1: Test timeout computed to be: 1500
1: #!/bin/sh -ve
1:
1: PFSEARCH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch
1: PFSCAN=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscan
1: GTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/gtop
1: HTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/htop
1: PFSCALE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscale
1: PFMAKE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake
1: PFW=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfw
1: PTOH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptoh
1: PTOF=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptof
1: X2FT=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/2ft
1: PSA2MSA=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/psa2msa
1:
1: CMPDIR=/build/reproducible-path/pftools-3.2.12/data/Matrices
1:
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# PATHS"
1: # PATHS
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# PFSEARCH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch"
1: # PFSEARCH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch
1: echo "# PFSCAN=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscan"
1: # PFSCAN=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscan
1: echo "# GTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/gtop"
1: # GTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/gtop
1: echo "# HTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/htop"
1: # HTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/htop
1: echo "# PFSCALE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscale"
1: # PFSCALE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscale
1: echo "# PFMAKE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake"
1: # PFMAKE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake
1: echo "# PFW=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfw"
1: # PFW=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfw
1: echo "# PTOH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptoh"
1: # PTOH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptoh
1: echo "# PTOF=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptof"
1: # PTOF=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptof
1: echo "# 2FT=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/2ft"
1: # 2FT=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/2ft
1: echo "# PSA2MSA=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/psa2msa"
1: # PSA2MSA=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/psa2msa
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 1: pfsearch -f -C 6.0 sh3.prf sh3.seq"
1: # pftools test 1: pfsearch -f -C 6.0 sh3.prf sh3.seq
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFSEARCH -f sh3.prf VAV_HUMAN.seq
1: 11.796 663 pos. 617 - 660 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
1: 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 2: pfsearch -bx ecp.prf CVPBR322.embl | psa2msa -du"
1: # pftools test 2: pfsearch -bx ecp.prf CVPBR322.embl | psa2msa -du
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFSEARCH -bx ecp.prf CVPBR322.embl | $PSA2MSA -du
1: >CVPBR322_1 63.920 271 pos. 1 - 41 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: TTCTCATGTTTGACAGCTTATCATC----GATAAGCTTTAATGCG
1: >CVPBR322_2 45.534 240 pos. 25 - 65 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: CGATAAGCTTTAATGCGGTAGTTTA----TCACAGTTAAATTGCT
1: >CVPBR322_3 55.617 257 pos. 1589 - 1629 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: CAACATGAATGGTCTTCGGTTTCCG----TGTTTCGTAAAGTCTG
1: >CVPBR322_4 46.720 242 pos. 2274 - 2314 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: CAGATTGTACTGAGAGTGCACCATA----TGCGGTGTGAAATACC
1: >CVPBR322_5 48.500 245 pos. 2296 - 2340 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC
1: >CVPBR322_6 64.513 272 pos. 2931 - 2972 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ACAGAGTTCTTGAAGTGGTGGCCTA---ACTACGGCTACACTAGA
1: >CVPBR322_7 50.872 249 pos. 3207 - 3246 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: AAAAGGATCTTCACCTAGATCCTTT-----TAAATTAAAAATGAA
1: >CVPBR322_8 45.534 240 pos. 3233 - 3274 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: AAATTAAAAATGAAGTTTTAAATCA---ATCTAAAGTATATATGA
1: >CVPBR322_9 53.244 253 pos. 3240 - 3284 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG
1: >CVPBR322_10 52.058 251 pos. 3350 - 3391 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: CATAGTTGCCTGACTCCCCGTCGTG---TAGATAACTACGATACG
1: >CVPBR322_11 53.837 254 pos. 3788 - 3828 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ACTGCATAATTCTCTTACTGTCATG----CCATCCGTAAGATGCT
1: >CVPBR322_12 46.127 241 pos. 3796 - 3836 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ATTCTCTTACTGTCATGCCATCCGT----AAGATGCTTTTCTGTG
1: >CVPBR322_13 56.210 258 pos. 4133 - 4173 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ACGGAAATGTTGAATACTCATACTC----TTCCTTTTTCAATATT
1: >CVPBR322_14 53.244 253 pos. 4166 - 4207 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: TCAATATTATTGAAGCATTTATCAG---GGTTATTGTCTCATGAG
1: >CVPBR322_15 52.058 251 pos. 4187 - 4227 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: TCAGGGTTATTGTCTCATGAGCGGA----TACATATTTGAATGTA
1: >CVPBR322_16 56.803 259 pos. 4273 - 4312 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: AAGTGCCACCTGACGTCTAAGAAAC-----CATTATTATCATGAC
1: >CVPBR322_17 47.906 244 pos. 4291 - 4331 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: AAGAAACCATTATTATCATGACATT----AACCTATAAAAATAGG
1: >CVPBR322_18 47.906 244 pos. 4299 - 4342 J01749|CVPBR322 Cloning vector pBR322, complete genome.
1: ATTATTATCATGACATTAACCTATA-AAAATAGGCGTATCACGAG
1: >CVPBR322_19 50.279 248 pos. 4348 - 4308 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: AAGGGCCTCGTGATACGCCTATTTT----TATAGGTTAATGTCAT
1: >CVPBR322_20 47.906 244 pos. 4336 - 4296 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: ATACGCCTATTTTTATAGGTTAATG----TCATGATAATAATGGT
1: >CVPBR322_21 50.279 248 pos. 4323 - 4283 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: TATAGGTTAATGTCATGATAATAAT----GGTTTCTTAGACGTCA
1: >CVPBR322_22 52.651 252 pos. 4232 - 4192 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: CTAAATACATTCAAATATGTATCCG----CTCATGAGACAATAAC
1: >CVPBR322_23 50.872 249 pos. 4178 - 4135 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: TCAATAATATTGAAAAAGGAAGAGT-ATGAGTATTCAACATTTCC
1: >CVPBR322_24 46.127 241 pos. 3954 - 3913 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: TGAGCACTTTTAAAGTTCTGCTATG---TGGCGCGGTATTATCCC
1: >CVPBR322_25 46.720 242 pos. 3861 - 3821 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: ATGACTTGGTTGAGTACTCACCAGT----CACAGAAAAGCATCTT
1: >CVPBR322_26 45.534 240 pos. 3569 - 3529 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: ACTACTTACTCTAGCTTCCCGGCAA----CAATTAATAGACTGGA
1: >CVPBR322_27 47.313 243 pos. 3464 - 3420 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: TGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGC
1: >CVPBR322_28 54.431 255 pos. 3301 - 3261 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: CATTGGTAACTGTCAGACCAAGTTT----ACTCATATATACTTTA
1: >CVPBR322_29 51.465 250 pos. 3273 - 3232 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: CATATATACTTTAGATTGATTTAAA---ACTTCATTTTTAATTTA
1: >CVPBR322_30 45.534 240 pos. 3267 - 3225 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: TACTTTAGATTGATTTAAAACTTCA--TTTTTAATTTAAAAGGAT
1: >CVPBR322_31 46.127 241 pos. 3250 - 3210 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: AAACTTCATTTTTAATTTAAAAGGA----TCTAGGTGAAGATCCT
1: >CVPBR322_32 53.244 253 pos. 3216 - 3173 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: AGATCCTTTTTGATAATCTCATGAC-CAAAATCCCTTAACGTGAG
1: >CVPBR322_33 60.362 265 pos. 3131 - 3091 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: AGGATCTTCTTGAGATCCTTTTTTT----CTGCGCGTAATCTGCT
1: >CVPBR322_34 47.313 243 pos. 2318 - 2274 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: GTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTG
1: >CVPBR322_35 58.582 262 pos. 85 - 41 J01749|CVPBR322(-) Cloning vector pBR322, complete genome.
1: ACACGGTGCCTGACTGCGTTAGCAATTTAACTGTGATAAACTACC
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 3: pfscan -s GTPA_HUMAN.dat prosite13.prf"
1: # pftools test 3: pfscan -s GTPA_HUMAN.dat prosite13.prf
1: $PFSCAN -s GTPA_HUMAN.dat prosite13.prf
1: >C2_DOMAIN_2 10.353 680 pos. 594 - 676 PS50004|C2_DOMAIN_2 C2-domain profile.
1: SSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINR
1: FEITLSNKTKKSKDPDILFMRCQ
1: >PH_DOMAIN 16.616 659 pos. 474 - 577 PS50003|PH_DOMAIN PH domain profile.
1: NIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDS
1: LFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCN
1: >SH2_1 21.898 1450 pos. 181 - 272 PS50001|SH2 Src homology 2 (SH2) domain profile.
1: WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAMCGDYY
1: IGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPV
1: >SH2_2 20.059 1326 pos. 351 - 441 PS50001|SH2 Src homology 2 (SH2) domain profile.
1: WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM
1: MGGRYYNSIGDIIDHYRKEQIVEGYYLKEPV
1: >SH3 11.812 664 pos. 279 - 341 PS50002|SH3 Src homology 3 (SH3) domain profile.
1: EDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE
1: VGR
1: >RAS_GTPASE_ACTIV_2 56.401 3900 pos. 748 - 942 PS50018|RAS_GTPASE_ACTIV_2 Ras GTPase-activating proteins profile.
1: DRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATAT
1: QFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLTHLLNILSELVEKIFMASEILP
1: PTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAA
1: RTLILVAKSVQNLAN
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 4: pfscan -by -C 2 CVPBR322.embl ecp.prf"
1: # pftools test 4: pfscan -by -C 2 CVPBR322.embl ecp.prf
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFSCAN -by -C 2 CVPBR322.embl ecp.prf
1: 63.920 271 pos. 1 - 41 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 1 TTCTCATGTTTGACAGCTTATCATC----GATAAGCTTTAATGCG -4321
1: #
1: 55.617 257 pos. 1589 - 1629 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 1589 CAACATGAATGGTCTTCGGTTTCCG----TGTTTCGTAAAGTCTG -2733
1: #
1: 64.513 272 pos. 2931 - 2972 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 2931 ACAGAGTTCTTGAAGTGGTGGCCTA---ACTACGGCTACACTAGA -1390
1: #
1: 56.210 258 pos. 4133 - 4173 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 4133 ACGGAAATGTTGAATACTCATACTC----TTCCTTTTTCAATATT -189
1: #
1: 56.803 259 pos. 4273 - 4312 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 4273 AAGTGCCACCTGACGTCTAAGAAAC-----CATTATTATCATGAC -50
1: #
1: 60.362 265 pos. 3131 - 3091 NS00001|ECOLI_PROM_RP70(-) E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 3131 AGGATCTTCTTGAGATCCTTTTTTT----CTGCGCGTAATCTGCT -1271
1: #
1: 58.582 262 pos. 85 - 41 NS00001|ECOLI_PROM_RP70(-) E. coli RNA POL sigma-70 promoter.
1: #
1: # P 1 *********TTGACA*********************TATAAT*** -1
1: # S 85 ACACGGTGCCTGACTGCGTTAGCAATTTAACTGTGATAAACTACC -4321
1: #
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 5: gtop -F 50 sh3.gpr | pfsearch -far - sh3.seq"
1: # pftools test 5: gtop -F 50 sh3.gpr | pfsearch -far - sh3.seq
1: echo "# | sort -nr"
1: # | sort -nr
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $GTOP -F 50 sh3.gpr | ${PFSEARCH} -far - sh3.seq | sort -nr
1: 944 sp|P00523|SRC_CHICK PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC (EC 2.7.1.112) (P60-SRC).
1: 874 sp|P43603|YFJ4_YEAST HYPOTHETICAL 40.4 KD PROTEIN IN PES4-HIS2 INTERGENIC REGION.
1: 839 sp|P29355|SEM5_CAEEL SEX MUSCLE ABNORMAL PROTEIN 5.
1: 825 sp|P16333|NCK_HUMAN CYTOPLASMIC PROTEIN NCK.
1: 819 sp|P15498|VAV_HUMAN VAV ONCOGENE.
1: 805 sp|P16885|PIP5_HUMAN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE GAMMA 2 (EC 3.1.4.11) (PLC-GAMMA-2) (PHOSPHOLIPASE C-GAMMA-2) (PLC-IV).
1: 764 sp|P23727|P85A_BOVIN PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA SUBUNIT (PI3-KINASE P85-ALPHA SUBUNIT) (PTDINS-3-KINASE P85-ALPHA) (PI3K).
1: 750 sp|P34092|MYSB_DICDI MYOSIN IB HEAVY CHAIN.
1: 744 sp|P14598|NCF1_HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-1) (NCF-47K) (47 KD AUTOSOMAL CHRONIC GRANULOMATOUS DISEASE PROTEIN).
1: 699 sp|P00519|ABL1_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL (EC 2.7.1.112) (P150) (C-ABL).
1: 633 sp|P40996|SCD2_SCHPO SCD2 PROTEIN.
1: 619 sp|P38822|YHR4_YEAST HYPOTHETICAL 71.2 KD PROTEIN IN CDC12-ORC6 INTERGENIC REGION.
1: 555 sp|P04821|CC25_YEAST CELL DIVISION CONTROL PROTEIN 25.
1: 544 sp|P39969|BEB1_YEAST BEB1 PROTEIN.
1: 466 sp|Q07157|ZO1_HUMAN TIGHT JUNCTION PROTEIN ZO-1.
1: 329 sp|P26674|STE6_SCHPO STE6 PROTEIN.
1: 303 sp|P03949|ABL1_CAEEL TYROSINE-PROTEIN KINASE ABL-1 (EC 2.7.1.112) (FRAGMENT).
1: 298 sp|Q02640|CICX_HUMAN DIHYDROPRYRIDINE-SENSITIVE L-TYPE, BRAIN CALCIUM CHANNEL BETA-1-B1 SUBUNIT.
1: 293 sp|Q08289|MSAB_HUMAN LAMBERT-EATON MYASTHENIC SYNDROME ANTIGEN B (MYSB).
1: 279 sp|P20936|GTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP) (RAS P21 PROTEIN ACTIVATOR).
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 6: htop pfam_sh3.hmm | pfsearch -f - sh3.seq"
1: # pftools test 6: htop pfam_sh3.hmm | pfsearch -f - sh3.seq
1: echo " | sort -nr"
1: | sort -nr
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $HTOP pfam_sh3.hmm | ${PFSEARCH} -f - sh3.seq | sort -nr
1: 19.485 100384 pos. 317 - 373 sp|P43603|YFJ4_YEAST HYPOTHETICAL 40.4 KD PROTEIN IN PES4-HIS2 INTERGENIC REGION.
1: 19.303 98748 pos. 157 - 211 sp|P29355|SEM5_CAEEL SEX MUSCLE ABNORMAL PROTEIN 5.
1: 19.183 97669 pos. 83 - 139 sp|P00523|SRC_CHICK PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC (EC 2.7.1.112) (P60-SRC).
1: 18.790 94141 pos. 1056 - 1111 sp|P34092|MYSB_DICDI MYOSIN IB HEAVY CHAIN.
1: 18.265 89412 pos. 786 - 841 sp|P15498|VAV_HUMAN VAV ONCOGENE.
1: 17.931 86411 pos. 1 - 56 sp|P29355|SEM5_CAEEL SEX MUSCLE ABNORMAL PROTEIN 5.
1: 17.706 84386 pos. 193 - 250 sp|P16333|NCK_HUMAN CYTOPLASMIC PROTEIN NCK.
1: 17.657 83950 pos. 772 - 827 sp|P16885|PIP5_HUMAN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE GAMMA 2 (EC 3.1.4.11) (PLC-GAMMA-2) (PHOSPHOLIPASE C-GAMMA-2) (PLC-IV).
1: 17.544 82931 pos. 5 - 59 sp|P16333|NCK_HUMAN CYTOPLASMIC PROTEIN NCK.
1: 16.584 74299 pos. 27 - 84 sp|P40996|SCD2_SCHPO SCD2 PROTEIN.
1: 16.486 73418 pos. 159 - 213 sp|P14598|NCF1_HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-1) (NCF-47K) (47 KD AUTOSOMAL CHRONIC GRANULOMATOUS DISEASE PROTEIN).
1: 16.430 72911 pos. 64 - 119 sp|P00519|ABL1_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL (EC 2.7.1.112) (P150) (C-ABL).
1: 15.759 66878 pos. 46 - 105 sp|P39969|BEB1_YEAST BEB1 PROTEIN.
1: 15.511 64650 pos. 229 - 283 sp|P14598|NCF1_HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-1) (NCF-47K) (47 KD AUTOSOMAL CHRONIC GRANULOMATOUS DISEASE PROTEIN).
1: 15.503 64573 pos. 109 - 163 sp|P16333|NCK_HUMAN CYTOPLASMIC PROTEIN NCK.
1: 14.963 59722 pos. 496 - 553 sp|P38822|YHR4_YEAST HYPOTHETICAL 71.2 KD PROTEIN IN CDC12-ORC6 INTERGENIC REGION.
1: 14.515 55695 pos. 126 - 183 sp|P40996|SCD2_SCHPO SCD2 PROTEIN.
1: 13.945 50565 pos. 3 - 58 sp|P26674|STE6_SCHPO STE6 PROTEIN.
1: 13.506 46616 pos. 580 - 633 sp|P38822|YHR4_YEAST HYPOTHETICAL 71.2 KD PROTEIN IN CDC12-ORC6 INTERGENIC REGION.
1: 13.399 45653 pos. 282 - 339 sp|P20936|GTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP) (RAS P21 PROTEIN ACTIVATOR).
1: 11.564 29159 pos. 6 - 77 sp|P23727|P85A_BOVIN PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA SUBUNIT (PI3-KINASE P85-ALPHA SUBUNIT) (PTDINS-3-KINASE P85-ALPHA) (PI3K).
1: 11.218 26047 pos. 61 - 126 sp|P04821|CC25_YEAST CELL DIVISION CONTROL PROTEIN 25.
1: 10.425 18915 pos. 601 - 658 sp|P15498|VAV_HUMAN VAV ONCOGENE.
1: #echo "#----------------------------------------------------------------------#"
1: #echo "# pftools test 6b: htop htop_issue.hmm"
1: #echo "#----------------------------------------------------------------------#"
1: #FIXME Fortran runtime error: $HTOP htop_issue.hmm
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 7: pfw -N 1000 sh3.msf |"
1: # pftools test 7: pfw -N 1000 sh3.msf |
1: echo "# pfmake -b -H 0.6 - blosum45.cmp"
1: # pfmake -b -H 0.6 - blosum45.cmp
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFW -N 1000 sh3.msf | ${PFMAKE} -b -H 0.6 - $CMPDIR/blosum45.cmp
1: ID SEQUENCE_PROFILE; MATRIX.
1: AC ZZ99999;
1: DT Mon Apr 13 20:51:46 2026
1: DE Generated from MSF file: 'stdin'.
1: MA /GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=62;
1: MA /DISJOINT: DEFINITION=PROTECT; N1=6; N2=57;
1: MA /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.0000000; R2=0.0100000; TEXT='No_units';
1: MA /CUT_OFF: LEVEL=0; SCORE=850; N_SCORE=8.50000000; MODE=1; TEXT='!';
1: MA /CUT_OFF: LEVEL=-1; SCORE=650; N_SCORE=6.50000000; MODE=1; TEXT='?';
1: MA /DEFAULT: M0=-8; D=-20; I=-20; B1=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105;
1: MA /I: B1=0; BI=-105; BD=-105;
1: MA /M: SY='P'; M=-1,-9,-25,-10,-4,-19,-4,-12,-14,-7,-16,-8,-6,3,-4,-9,0,-4,-13,-24,-14,-6;
1: MA /M: SY='D'; M=-7,2,-26,7,5,-23,-14,-9,-14,-6,-17,-11,-3,4,-2,-12,-2,-6,-12,-29,-15,0;
1: MA /M: M=-4,-11,-24,-11,-6,-12,-11,-13,-12,-6,-10,-8,-8,-7,-6,-1,-3,-4,-8,-23,-12,-7;
1: MA /M: M=-12,-13,-26,-15,-8,0,-11,-6,-14,-5,-10,-5,-8,-9,-8,0,-10,-9,-13,-16,-2,-9;
1: MA /M: SY='T'; M=-3,-13,-20,-17,-9,-4,-22,-14,-3,-5,-4,0,-11,-13,-6,-5,-4,5,1,-19,-2,-8;
1: MA /M: SY='V'; M=0,-20,-18,-24,-23,5,-19,-16,11,-17,2,4,-16,-24,-20,-18,-8,-3,16,-14,6,-22;
1: MA /M: SY='R'; M=-10,-14,-24,-15,-7,-15,-25,-13,-4,9,-9,-1,-10,-19,-1,19,-9,-5,4,-24,-9,-6;
1: MA /M: SY='A'; M=38,-11,-10,-20,-12,-16,-6,-21,-6,-11,-8,-8,-11,-12,-12,-19,9,7,5,-22,-18,-12;
1: MA /M: SY='L'; M=-8,-16,-24,-20,-12,-5,-26,-10,12,-16,17,9,-11,-22,-8,-12,-17,-9,3,-23,-4,-12;
1: MA /M: SY='Y'; M=-13,-18,-24,-22,-19,27,-26,4,-1,-13,1,-1,-15,-27,-16,-12,-14,-8,-3,6,40,-19;
1: MA /M: SY='D'; M=-6,26,-27,37,14,-33,-6,-6,-31,-3,-27,-24,11,-1,-1,-11,4,-7,-25,-35,-21,6;
1: MA /M: SY='Y'; M=-20,-23,-27,-26,-23,45,-30,8,0,-16,3,0,-20,-30,-19,-13,-20,-10,-7,24,65,-23;
1: MA /M: SY='E'; M=-1,1,-15,-2,5,-15,-16,-10,-13,-2,-14,-9,2,-14,-1,-6,4,4,-7,-29,-14,2;
1: MA /I: I=-4; MI=0; MD=-23; IM=0; DM=-23;
1: MA /M: SY='A'; M=21,-6,-18,-9,-3,-24,-6,-15,-16,1,-18,-12,-6,-4,-3,-8,6,-2,-8,-24,-18,-4;
1: MA /M: SY='E'; M=-3,-2,-23,0,13,-25,-11,-7,-22,7,-22,-13,0,-5,10,8,7,0,-17,-28,-17,11;
1: MA /M: SY='D'; M=-8,6,-25,8,7,-25,-6,0,-26,4,-24,-14,8,-9,5,7,6,-2,-21,-30,-16,5;
1: MA /M: SY='E'; M=-4,5,-26,11,14,-28,-4,-10,-27,-4,-25,-20,1,9,-1,-9,6,-2,-23,-31,-22,5;
1: MA /M: SY='D'; M=-12,25,-26,34,13,-30,-7,-2,-30,-2,-25,-21,12,-11,4,-8,5,-2,-25,-32,-14,8;
1: MA /M: SY='E'; M=-11,11,-28,20,40,-25,-14,-4,-28,3,-17,-19,1,-5,10,-5,-1,-8,-26,-29,-17,25;
1: MA /M: SY='L'; M=-8,-30,-20,-32,-23,6,-31,-23,26,-28,38,20,-28,-28,-21,-21,-25,-8,20,-22,-2,-23;
1: MA /M: SY='S'; M=2,4,-19,6,5,-24,-7,-9,-23,-3,-27,-19,7,1,0,-5,19,8,-16,-35,-20,1;
1: MA /M: SY='F'; M=-10,-29,-20,-35,-26,34,-30,-22,16,-27,20,11,-23,-27,-28,-21,-20,-8,13,-9,10,-26;
1: MA /I: I=-4; MI=0; MD=-21; IM=0; DM=-21;
1: MA /M: SY='K'; M=-6,2,-18,0,6,-21,-17,-5,-19,9,-16,-10,4,-14,3,4,-1,-2,-16,-28,-12,4;
1: MA /M: SY='K'; M=-3,-7,-28,-5,7,-26,-18,-11,-22,17,-21,-11,-7,10,4,11,-6,-7,-19,-23,-16,4;
1: MA /M: SY='G'; M=-1,-7,-30,-8,-17,-30,60,-18,-38,-13,-30,-19,2,-19,-17,-15,0,-18,-29,-21,-28,-17;
1: MA /M: SY='D'; M=-13,34,-28,48,29,-35,-12,-1,-34,2,-26,-25,14,-7,5,-7,1,-7,-28,-36,-20,17;
1: MA /M: SY='V'; M=-4,-18,-20,-24,-17,1,-25,-20,7,-7,1,5,-15,-20,-15,-6,-9,0,11,-19,-3,-16;
1: MA /M: SY='I'; M=-10,-30,-22,-35,-27,14,-34,-25,31,-28,25,17,-24,-26,-24,-24,-21,-8,23,-17,3,-27;
1: MA /M: SY='H'; M=-12,-6,-27,-7,1,-13,-23,6,-11,-1,-12,-5,-3,-15,1,1,-5,-3,-12,-16,1,-1;
1: MA /M: SY='V'; M=-2,-26,-17,-30,-26,0,-30,-26,29,-23,17,12,-23,-26,-24,-22,-14,-4,33,-26,-7,-26;
1: MA /M: SY='I'; M=-8,-22,-22,-26,-21,-3,-30,-17,22,-17,15,13,-17,-23,-16,-16,-15,-5,19,-24,-3,-20;
1: MA /M: SY='E'; M=-4,13,-24,12,14,-26,-5,0,-26,6,-24,-17,14,-11,5,1,4,-5,-24,-30,-17,9;
1: MA /M: SY='K'; M=-8,1,-27,2,5,-24,-12,-8,-26,24,-23,-12,1,-13,3,18,-5,-6,-17,-22,-10,3;
1: MA /I: I=-3; MI=0; MD=-13; IM=0; DM=-13;
1: MA /M: SY='N'; M=-6,2,-16,1,1,-10,-13,-2,-15,-6,-11,-10,3,-16,-5,-8,1,0,-14,-24,-5,-2; D=-3;
1: MA /I: I=-3; DM=-13;
1: MA /M: SY='E'; M=-8,13,-25,15,16,-25,-6,-3,-24,-1,-20,-16,12,-8,5,-5,3,-5,-24,-32,-18,10;
1: MA /M: SY='D'; M=-7,9,-27,11,1,-28,3,-2,-26,-3,-27,-17,10,-3,1,-7,4,-7,-24,-31,-19,0;
1: MA /M: SY='G'; M=-3,7,-27,9,0,-29,29,-7,-34,-10,-28,-20,9,-15,-7,-13,5,-11,-27,-28,-23,-3;
1: MA /M: SY='W'; M=-20,-40,-50,-40,-30,10,-20,-30,-20,-20,-20,-20,-40,-30,-20,-20,-40,-30,-30,150,30,-20;
1: MA /M: SY='W'; M=-15,-30,-25,-32,-25,7,-23,-20,-10,-19,-5,-7,-30,-28,-18,-18,-27,-14,-16,71,21,-19;
1: MA /M: SY='E'; M=-9,-5,-26,-5,3,-10,-21,-11,-11,3,-11,-8,-6,-16,-3,2,-9,-7,-9,-13,-4,0;
1: MA /M: SY='G'; M=6,-16,-13,-20,-22,-20,24,-23,-13,-21,-14,-9,-10,-21,-20,-22,-3,-12,-5,-24,-22,-22;
1: MA /M: SY='R'; M=-14,-3,-21,-3,6,-20,-20,0,-21,11,-16,-9,1,-16,10,24,-5,-6,-18,-24,-8,6;
1: MA /M: SY='N'; M=-9,-2,-12,-10,-12,-8,-19,-8,-2,-10,-4,-2,5,-18,-10,-10,-7,-3,-6,-27,-6,-12;
1: MA /M: M=-8,0,-24,0,-5,-16,-12,-13,-7,-7,-9,-7,0,-13,-9,-11,-4,-4,-6,-27,-11,-8;
1: MA /I: I=-4; MD=-22;
1: MA /M: SY='K'; M=-2,-1,-12,-2,-1,-12,-4,-6,-12,6,-11,-5,0,-7,0,6,2,3,-7,-14,-7,-1; D=-4;
1: MA /I: I=-4; MI=0; MD=-22; IM=0; DM=-22;
1: MA /M: SY='T'; M=1,-1,-11,-4,-2,-10,-3,-10,-10,-4,-7,-7,1,-8,-5,-5,6,12,-6,-17,-9,-3; D=-4;
1: MA /I: I=-4; DM=-22;
1: MA /M: SY='G'; M=-4,3,-13,0,-10,-25,22,-13,-27,-12,-24,-17,9,-21,-13,-12,0,-11,-20,-29,-24,-12;
1: MA /M: SY='E'; M=-9,1,-27,2,18,-24,-12,-5,-19,7,-16,-9,1,-11,10,5,-3,-7,-19,-26,-15,13;
1: MA /M: SY='R'; M=-10,-10,-25,-11,1,-18,-23,-10,-9,6,-12,-5,-7,-10,5,14,-4,1,-5,-24,-11,1;
1: MA /M: SY='G'; M=0,-10,-30,-10,-18,-30,66,-19,-39,-19,-30,-19,0,-20,-17,-19,0,-20,-30,-20,-29,-18;
1: MA /M: SY='W'; M=-16,-29,-31,-31,-25,23,-27,-19,3,-24,10,0,-27,-28,-22,-20,-28,-16,-5,40,23,-22;
1: MA /M: SY='F'; M=-11,-29,-21,-37,-29,32,-33,-24,23,-27,12,8,-22,-26,-29,-23,-17,-8,20,-8,12,-29;
1: MA /M: SY='P'; M=-10,-20,-39,-11,-1,-29,-20,-20,-18,-10,-28,-19,-20,84,-11,-20,-10,-10,-26,-30,-29,-11;
1: MA /M: SY='S'; M=6,-4,-7,-7,-4,-18,-8,-14,-14,-9,-17,-12,1,-15,-4,-10,16,11,-6,-33,-17,-4;
1: MA /M: SY='N'; M=-5,21,-18,10,-1,-19,-6,-1,-17,-1,-24,-15,31,-16,-2,-3,14,7,-18,-37,-17,-1;
1: MA /M: SY='Y'; M=-19,-17,-21,-21,-19,28,-27,11,-4,-13,0,-1,-14,-29,-14,-8,-17,-10,-10,11,49,-19;
1: MA /M: SY='V'; M=-6,-26,-14,-30,-26,1,-27,-26,22,-21,11,9,-23,-26,-24,-17,-13,-4,27,-25,-6,-26;
1: MA /M: SY='E'; M=-5,2,-21,4,22,-27,-18,-4,-25,10,-19,-13,-1,-9,16,9,1,-2,-21,-26,-15,18;
1: MA /M: SY='P'; M=-10,-9,-30,-4,8,-17,-22,-10,-12,-1,-11,-7,-11,12,-2,-6,-9,-8,-15,-23,-10,1;
1: MA /M: SY='I'; M=-7,-12,-22,-14,-10,-8,-22,-11,4,-9,-2,2,-9,-19,-5,-8,-3,-1,4,-22,-1,-9;
1: MA /M: SY='N'; M=-7,5,-24,6,-2,-22,6,-8,-22,-5,-19,-14,7,-17,-4,-5,2,-5,-17,-27,-15,-4;
1: MA /M: SY='S'; M=0,-1,-13,-3,-4,-19,-13,-4,-15,-4,-15,-10,2,-16,-2,-2,7,2,-9,-30,-13,-4;
1: MA /I: E1=0; IE=-105; DE=-105;
1: CC /GENERATED_BY="/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake -b -H 0.6 - /build/reproduci..";
1: //
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 8: ptoh -L 1.15 ecp.prf"
1: # pftools test 8: ptoh -L 1.15 ecp.prf
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PTOH -L 1.15 ecp.prf
1: # HMM v1.7
1: # HMM converted from generalized profile with pftools program htop.
1: # Logarithic base of profile: 1.15000000.
1: # Offset: profile score = 0.2180E+03 + Log(Prob).
1: 45 # M -- length of model
1: 4 # alphabet length
1: 1 # alphabet type
1: ACGT # alphabet
1: no # Optional reference line annotation?
1: no # Optional consensus structure annotation?
1: ###MATCH_STATE 0 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.000000 # Symbol A probability
1: 0.000000 # Symbol C probability
1: 0.000000 # Symbol G probability
1: 0.000000 # Symbol T probability
1: ###DELETE_STATE 0 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 0 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 1 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.492674 # Symbol A probability
1: 0.161056 # Symbol C probability
1: 0.161056 # Symbol G probability
1: 0.185214 # Symbol T probability
1: ###DELETE_STATE 1 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 1 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 2 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.347990 # Symbol A probability
1: 0.198964 # Symbol C probability
1: 0.150446 # Symbol G probability
1: 0.302600 # Symbol T probability
1: ###DELETE_STATE 2 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 2 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 3 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.347990 # Symbol A probability
1: 0.150446 # Symbol C probability
1: 0.198964 # Symbol G probability
1: 0.302600 # Symbol T probability
1: ###DELETE_STATE 3 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 3 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 4 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.302600 # Symbol A probability
1: 0.198964 # Symbol C probability
1: 0.150446 # Symbol G probability
1: 0.347990 # Symbol T probability
1: ###DELETE_STATE 4 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 4 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 5 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.357012 # Symbol A probability
1: 0.204123 # Symbol C probability
1: 0.204123 # Symbol G probability
1: 0.234741 # Symbol T probability
1: ###DELETE_STATE 5 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 5 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 6 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.312748 # Symbol A probability
1: 0.178815 # Symbol C probability
1: 0.236482 # Symbol G probability
1: 0.271955 # Symbol T probability
1: ###DELETE_STATE 6 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 6 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 7 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.176792 # Symbol A probability
1: 0.233808 # Symbol C probability
1: 0.233808 # Symbol G probability
1: 0.355592 # Symbol T probability
1: ###DELETE_STATE 7 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 7 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 8 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.226936 # Symbol A probability
1: 0.149214 # Symbol C probability
1: 0.226936 # Symbol G probability
1: 0.396913 # Symbol T probability
1: ###DELETE_STATE 8 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 8 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 9 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.233808 # Symbol A probability
1: 0.355592 # Symbol C probability
1: 0.233808 # Symbol G probability
1: 0.176792 # Symbol T probability
1: ###DELETE_STATE 9 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 9 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 10 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.070255 # Symbol A probability
1: 0.080794 # Symbol C probability
1: 0.092913 # Symbol G probability
1: 0.756038 # Symbol T probability
1: ###DELETE_STATE 10 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 10 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 11 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.072668 # Symbol A probability
1: 0.072668 # Symbol C probability
1: 0.072668 # Symbol G probability
1: 0.781997 # Symbol T probability
1: ###DELETE_STATE 11 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 11 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 12 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.069414 # Symbol A probability
1: 0.091800 # Symbol C probability
1: 0.746985 # Symbol G probability
1: 0.091800 # Symbol T probability
1: ###DELETE_STATE 12 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 12 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 13 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.615515 # Symbol A probability
1: 0.132301 # Symbol C probability
1: 0.100038 # Symbol G probability
1: 0.152146 # Symbol T probability
1: ###DELETE_STATE 13 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 13 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 14 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.211563 # Symbol A probability
1: 0.489359 # Symbol C probability
1: 0.139106 # Symbol G probability
1: 0.159972 # Symbol T probability
1: ###DELETE_STATE 14 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 14 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 15 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.389953 # Symbol A probability
1: 0.146598 # Symbol C probability
1: 0.168588 # Symbol G probability
1: 0.294861 # Symbol T probability
1: ###DELETE_STATE 15 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 15 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 16 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.221968 # Symbol A probability
1: 0.221968 # Symbol C probability
1: 0.167840 # Symbol G probability
1: 0.388224 # Symbol T probability
1: ###DELETE_STATE 16 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 16 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 17 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 17 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 17 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 18 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 18 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 18 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 19 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 19 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 19 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 20 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 20 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 20 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 21 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 21 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 21 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 22 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 22 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 22 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 23 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 23 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 23 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 24 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 24 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 24 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 25 ( ) ( )
1: 0.070544 # t_m1
1: 0.929456 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 25 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 25 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 26 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 26 ( ) ( )
1: 0.075898 # t_m1
1: 0.924101 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 26 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 27 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 27 ( ) ( )
1: 0.082132 # t_m1
1: 0.917868 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 27 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 28 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 28 ( ) ( )
1: 0.179979 # t_m1
1: 0.820021 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 28 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 29 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 29 ( ) ( )
1: 0.671398 # t_m1
1: 0.328602 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 29 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 30 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 30 ( ) ( )
1: 0.667924 # t_m1
1: 0.332077 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 30 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 31 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###DELETE_STATE 31 ( ) ( )
1: 0.999998 # t_m1
1: 0.000001 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 31 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 32 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.191600 # Symbol A probability
1: 0.220340 # Symbol C probability
1: 0.144877 # Symbol G probability
1: 0.443183 # Symbol T probability
1: ###DELETE_STATE 32 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 32 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 33 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.248783 # Symbol A probability
1: 0.216333 # Symbol C probability
1: 0.248783 # Symbol G probability
1: 0.286101 # Symbol T probability
1: ###DELETE_STATE 33 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 33 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 34 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.176792 # Symbol A probability
1: 0.233808 # Symbol C probability
1: 0.233808 # Symbol G probability
1: 0.355592 # Symbol T probability
1: ###DELETE_STATE 34 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 34 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 35 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.204123 # Symbol A probability
1: 0.204123 # Symbol C probability
1: 0.357012 # Symbol G probability
1: 0.234741 # Symbol T probability
1: ###DELETE_STATE 35 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 35 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 36 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.200265 # Symbol A probability
1: 0.230305 # Symbol C probability
1: 0.304579 # Symbol G probability
1: 0.264851 # Symbol T probability
1: ###DELETE_STATE 36 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 36 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 37 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.069414 # Symbol A probability
1: 0.091800 # Symbol C probability
1: 0.091800 # Symbol G probability
1: 0.746985 # Symbol T probability
1: ###DELETE_STATE 37 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 37 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 38 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.838598 # Symbol A probability
1: 0.051239 # Symbol C probability
1: 0.051239 # Symbol G probability
1: 0.058924 # Symbol T probability
1: ###DELETE_STATE 38 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 38 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 39 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.234671 # Symbol A probability
1: 0.177445 # Symbol C probability
1: 0.177445 # Symbol G probability
1: 0.410440 # Symbol T probability
1: ###DELETE_STATE 39 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 39 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 40 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.539727 # Symbol A probability
1: 0.153424 # Symbol C probability
1: 0.153424 # Symbol G probability
1: 0.153424 # Symbol T probability
1: ###DELETE_STATE 40 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 40 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 41 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.481052 # Symbol A probability
1: 0.180845 # Symbol C probability
1: 0.157257 # Symbol G probability
1: 0.180845 # Symbol T probability
1: ###DELETE_STATE 41 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 41 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 42 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.051239 # Symbol A probability
1: 0.058924 # Symbol C probability
1: 0.051239 # Symbol G probability
1: 0.838598 # Symbol T probability
1: ###DELETE_STATE 42 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 42 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 43 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.308994 # Symbol A probability
1: 0.153625 # Symbol C probability
1: 0.268691 # Symbol G probability
1: 0.268691 # Symbol T probability
1: ###DELETE_STATE 43 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 43 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 44 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.207431 # Symbol A probability
1: 0.315477 # Symbol C probability
1: 0.238546 # Symbol G probability
1: 0.238546 # Symbol T probability
1: ###DELETE_STATE 44 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 44 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: ###MATCH_STATE 45 ( ) ( )
1: 1.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.266231 # Symbol A probability
1: 0.266231 # Symbol C probability
1: 0.266231 # Symbol G probability
1: 0.201309 # Symbol T probability
1: ###DELETE_STATE 45 ( ) ( )
1: 0.000000 # t_m1
1: 1.000000 # t_d1
1: 0.000000 # t_i0
1: ###INSERT_STATE 45 ( ) ( )
1: 0.000000 # t_m1
1: 0.000000 # t_d1
1: 0.000000 # t_i0
1: 0.250000 # Symbol A probability
1: 0.250000 # Symbol C probability
1: 0.250000 # Symbol G probability
1: 0.250000 # Symbol T probability
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 9: pfscale -N 14147368 -P 0.0001 -Q 0.000001 score.lis"
1: # pftools test 9: pfscale -N 14147368 -P 0.0001 -Q 0.000001 score.lis
1: echo "# | sed -n 1,25p"
1: # | sed -n 1,25p
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFSCALE -N 14147368 -P 0.0001 -Q 0.000001 score.lis | sed -n 1,25p
1: # -LogP = 2.0437 + 0.00741886 * raw-score
1: #
1: # rank raw-score -logFreq -logProb
1: #
1: 1 621.00 7.4517 6.6508
1: 2 614.00 6.9746 6.5989
1: 3 606.00 6.7527 6.5395
1: 4 581.00 6.6066 6.3541
1: 5 576.00 6.4975 6.3170
1: 6 572.00 6.4103 6.2873
1: 7 569.00 6.3378 6.2650
1: 8 569.00 6.2756 6.2650
1: 9 561.00 6.2213 6.2057
1: 10 557.00 6.1730 6.1760
1: 11 554.00 6.1295 6.1538
1: 12 551.00 6.0900 6.1315
1: 13 548.00 6.0538 6.1092
1: 14 539.00 6.0203 6.0425
1: 15 532.00 5.9893 5.9905
1: 16 527.00 5.9603 5.9534
1: 17 526.00 5.9332 5.9460
1: 18 525.00 5.9076 5.9386
1: 19 523.00 5.8835 5.9238
1: 20 523.00 5.8606 5.9238
1: 21 519.00 5.8389 5.8941
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: echo "# pftools test 10: pfsearch -y coils.prf MYSA_HUMAN"
1: # pftools test 10: pfsearch -y coils.prf MYSA_HUMAN
1: echo "#----------------------------------------------------------------------#"
1: #----------------------------------------------------------------------#
1: $PFSEARCH -y coils.prf MYSA_HUMAN
1: 82.697 2354 pos. 848 - 1922 P13533|MYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM.
1: #
1: # P 5 efgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefga -7
1: # S 848 EKEMATMKEEFGRIKETLEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLNDAEERC -1033
1: #
1: # P 2 bcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcde -3
1: # S 908 DQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVE -973
1: #
1: # P 6 fgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgab -6
1: # S 968 KEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLSKSKV -913
1: #
1: # P 3 cdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdef -2
1: # S 1028 KLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEF -853
1: #
1: # P 7 gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabc -5
1: # S 1088 DINQQNSKIEDEQVLALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELEE -793
1: #
1: # P 4 defgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefga-bcdefgabcdef -2
1: # S 1148 ISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALrKKHADSVAELGE -733
1: #
1: # P 7 gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabc -5
1: # S 1208 QIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQANEYRVKLEE -673
1: #
1: # P 4 defgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefg -1
1: # S 1268 AQRSLNDFTTQRAKLQTENGELSRQLEEKEALISQLTRGKLSYTQQMEDLKRQLEEEGKA -613
1: #
1: # P 1 abcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgab-cdefgabc -5
1: # S 1328 KNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQCRTKYEtDAIQRTEE -553
1: #
1: # P 4 defgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefg -1
1: # S 1388 LEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKK -493
1: #
1: # P 1 abcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd -4
1: # S 1448 QRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNL -433
1: #
1: # P 5 efgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefga -7
1: # S 1508 QEEISDLTEQLGEGGKNVHELEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEF -373
1: #
1: # P 2 bcdefgabc-defgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd -4
1: # S 1568 NQIKAEIERkLAEKDEEMEQAKRNHQRVVDSLQTSLDAETRSRNEVLRVKKKMEGDLNEM -313
1: #
1: # P 5 efgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefga -7
1: # S 1628 EIQLSHANRMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAEL -253
1: #
1: # P 2 bcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcde -3
1: # S 1688 EELRAVVEQTERSRKLADRELIETSERVQLLHSQNTSLINQKKKMDADLSQLQSEVEEAV -193
1: #
1: # P 6 fgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdef-ga -7
1: # S 1748 QECRNAEEKAKKAITHAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQiAL -133
1: #
1: # P 2 bcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcde -3
1: # S 1808 KGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLLRLQ -73
1: #
1: # P 6 fgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd -4
1: # S 1868 DLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHELDEAEERADIAESQVNKL -18
1: #
1:
1/6 Test #1: execute_test_V2.sh .......................... Passed 0.71 sec
test 2
Start 2: execute_test_V3.sh
2: Test command: /usr/bin/sh "-ve" "test_V3.sh"
2: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
2: Test timeout computed to be: 1500
2: #!/bin/sh -ve
2:
2: #----------------------------------------------------------------------#
2: # PATHS declaration (set by cmake/make: do not modify them here)
2: #----------------------------------------------------------------------#
2: PFSEARCH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch
2: PFSCAN=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscan
2: PFSEARCHV3=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3
2: PFSCANV3=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3
2: PFCALIBRATEV3=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfcalibrateV3
2: PFINDEX=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfindex
2:
2: GTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/gtop
2: HTOP=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/htop
2: PFSCALE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfscale
2: PFMAKE=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake
2: PSA2MSA=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/psa2msa
2: PFW=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfw
2: PTOH=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptoh
2: PTOF=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/ptof
2: P2FT=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/2ft # NB: sh does not allow variable name starting with a digit
2:
2: SORT_PSA=/build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl # FIXME: use cmake syntax
2: MAKE_IUPAC_CMP=/build/reproducible-path/pftools-3.2.12/src/Perl/make_iupac_cmp.pl # FIXME: use cmake syntax
2: SCRAMBLE=/build/reproducible-path/pftools-3.2.12/src/Perl/scramble_fasta.pl # FIXME: use cmake syntax
2:
2: CMPDIR=/build/reproducible-path/pftools-3.2.12/data/Matrices
2: TMPDIR=/tmp/test_V3
2: mkdir -p $TMPDIR
2:
2: #----------------------------------------------------------------------#
2: # The PFTOOLS is a powerful software to align biological sequences.
2: # Owing to the 'generalized profile syntax', it allows the fine-tuning
2: # of an alignent scoring system, beyond what is feasible by most other
2: # software. Despite the PFTOOLS are crippled by a lot of legacy code,
2: # they are still extremely useful for precision work.
2: #
2: # Nota bene to use this script as a testsuite:
2: # (1) The output order of pfsearch is reproducible, as well as the one of
2: # pfsearchV3 with -t 1.
2: # (2) Refrain using any pipe.
2: #----------------------------------------------------------------------#
2:
2: #----------------------------------------------------------------------#
2: # Searching for the occurence of the SH3 domain within the VAV oncogene,
2: # using pfsearch V2 ...
2: #----------------------------------------------------------------------#
2: $PFSEARCH -f ./sh3.prf ./VAV_HUMAN.seq
2: 11.796 663 pos. 617 - 660 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2:
2: #----------------------------------------------------------------------#
2: # ...and using pfsearch V3:
2: #----------------------------------------------------------------------#
2: $PFSEARCHV3 -n -t 1 -f ./sh3.prf ./VAV_HUMAN.seq
2: 11.796 663 pos. 617 - 660 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2:
2: #----------------------------------------------------------------------#
2: # Create a database of sequences and a database of profiles, each one
2: # with two entries.
2: #----------------------------------------------------------------------#
2: cat ./VAV_HUMAN.seq ./VAV_RAT.seq > $TMPDIR/VAV.seq
2: cat ./sh2.prf ./sh3.prf > $TMPDIR/SHX.prf
2:
2: #----------------------------------------------------------------------#
2: # The following commands must all produce the same final results
2: #
2: # (1) pfsearch (V2) expects ONE profile and MANY sequences:
2: # (2) pfscan (V2) expects MANY profile and ONE sequences:
2: # (3) pfsearch (V3) expects ONE profile and MANY sequences:
2: # (4) pfscan (V3) supports MANY profiles and MANY sequences:
2: #----------------------------------------------------------------------#
2: $PFSEARCH -fkxz ./sh2.prf $TMPDIR/VAV.seq > $TMPDIR/SHX.pfsearch2.hit
2: $PFSEARCH -fkxz ./sh3.prf $TMPDIR/VAV.seq >> $TMPDIR/SHX.pfsearch2.hit
2:
2: $PFSCAN -fkxz ./VAV_HUMAN.seq $TMPDIR/SHX.prf > $TMPDIR/SHX.pfscan2.hit
2: $PFSCAN -fkxz ./VAV_RAT.seq $TMPDIR/SHX.prf >> $TMPDIR/SHX.pfscan2.hit
2:
2: $PFSEARCHV3 -f -n -t 2 -o 6 ./sh2.prf -f $TMPDIR/VAV.seq > $TMPDIR/SHX.pfsearch3.hit
2: $PFSEARCHV3 -f -n -t 2 -o 6 ./sh3.prf -f $TMPDIR/VAV.seq >> $TMPDIR/SHX.pfsearch3.hit
2:
2: $PFSCANV3 -f -n -o 6 $TMPDIR/SHX.prf $TMPDIR/VAV.seq > $TMPDIR/SHX.pfscan3.hit
2:
2: #----------------------------------------------------------------------#
2: # All these commands produces exactly the same list of matched
2: # sequences, with the same raw scores and coordinates.
2: #
2: # However the output order is not necessarily preserved here.
2: #
2: # Let's verify that the output are comparable after fixing FASTA headers
2: #----------------------------------------------------------------------#
2: $SORT_PSA -s $TMPDIR/SHX.pfscan2.hit > $TMPDIR/SHX.pfscan2.out
2: $SORT_PSA -s $TMPDIR/SHX.pfscan3.hit > $TMPDIR/SHX.pfscan3.out
2: $SORT_PSA -s $TMPDIR/SHX.pfsearch2.hit > $TMPDIR/SHX.pfsearch2.out
2: $SORT_PSA -s $TMPDIR/SHX.pfsearch3.hit > $TMPDIR/SHX.pfsearch3.out
2: diff $TMPDIR/SHX.pfscan2.out $TMPDIR/SHX.pfscan3.out # expecting no difference
2: diff $TMPDIR/SHX.pfscan2.out $TMPDIR/SHX.pfsearch2.out # expecting no difference
2: diff $TMPDIR/SHX.pfscan2.out $TMPDIR/SHX.pfsearch3.out # expecting no difference
2:
2: #----------------------------------------------------------------------#
2: # Pfsearch/pfscan V2 supports the following input formats for sequence:
2: # FASTA, Swiss-Prot and EMBL.
2: #----------------------------------------------------------------------#
2: $PFSEARCH -f ./sh3.prf ./VAV_HUMAN.seq # FASTA
2: 11.796 663 pos. 617 - 660 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: $PFSCAN -f ./VAV_HUMAN.seq ./sh3.prf # FASTA
2: 11.796 663 pos. 617 - 660 PS50002|SH3 Src homology 3 (SH3) domain profile.
2: 17.560 1015 pos. 782 - 842 PS50002|SH3 Src homology 3 (SH3) domain profile.
2:
2: $PFSEARCH ./sh3.prf ./GTPA_HUMAN.dat # SwissProt
2: 11.812 664 pos. 279 - 341 P20936|GTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP) (RAS P21 PROTEIN ACTIVATOR).
2: $PFSCAN ./GTPA_HUMAN.dat ./sh3.prf # SwissProt
2: 11.812 664 pos. 279 - 341 PS50002|SH3 Src homology 3 (SH3) domain profile.
2:
2: $PFSEARCH ./ecp.prf ./CVPBR322.embl # EMBL
2: 63.920 271 pos. 1 - 41 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 45.534 240 pos. 25 - 65 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 55.617 257 pos. 1589 - 1629 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 46.720 242 pos. 2274 - 2314 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 48.500 245 pos. 2296 - 2340 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 64.513 272 pos. 2931 - 2972 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 50.872 249 pos. 3207 - 3246 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 45.534 240 pos. 3233 - 3274 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 53.244 253 pos. 3240 - 3284 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 52.058 251 pos. 3350 - 3391 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 53.837 254 pos. 3788 - 3828 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 46.127 241 pos. 3796 - 3836 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 56.210 258 pos. 4133 - 4173 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 53.244 253 pos. 4166 - 4207 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 52.058 251 pos. 4187 - 4227 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 56.803 259 pos. 4273 - 4312 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 47.906 244 pos. 4291 - 4331 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: 47.906 244 pos. 4299 - 4342 J01749|CVPBR322 Cloning vector pBR322, complete genome.
2: $PFSCAN ./CVPBR322.embl ./ecp.prf # EMBL
2: 63.920 271 pos. 1 - 41 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 45.534 240 pos. 25 - 65 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 55.617 257 pos. 1589 - 1629 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 46.720 242 pos. 2274 - 2314 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 48.500 245 pos. 2296 - 2340 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 64.513 272 pos. 2931 - 2972 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 50.872 249 pos. 3207 - 3246 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 45.534 240 pos. 3233 - 3274 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 53.244 253 pos. 3240 - 3284 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 52.058 251 pos. 3350 - 3391 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 53.837 254 pos. 3788 - 3828 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 46.127 241 pos. 3796 - 3836 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 56.210 258 pos. 4133 - 4173 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 53.244 253 pos. 4166 - 4207 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 52.058 251 pos. 4187 - 4227 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 56.803 259 pos. 4273 - 4312 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 47.906 244 pos. 4291 - 4331 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: 47.906 244 pos. 4299 - 4342 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2:
2: #----------------------------------------------------------------------#
2: # Pfsearch/pfscan V3 supports the following input formats for sequence:
2: # FASTA and FASTQ.
2: #----------------------------------------------------------------------#
2: $PFSEARCHV3 -n -t 1 -f ./sh3.prf ./VAV_HUMAN.seq # FASTA
2: 11.796 663 pos. 617 - 660 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: $PFSCANV3 -n -t 1 -f ./sh3.prf ./VAV_HUMAN.seq # FASTA
2: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
2: L=0 11.796 663 pos. 617 - 660 PS50002|SH3 Src homology 3 (SH3) domain profile.
2: L=0 17.560 1015 pos. 782 - 842 PS50002|SH3 Src homology 3 (SH3) domain profile.
2: cat ./CVPBR322.embl \
2: | perl -ne 'if(/^ID +(\w+)/){print ">$1\n"}elsif(/^ /){s/[\s\d]+//g;print "$_\n";}' \
2: > $TMPDIR/CVPBR322.fa # Extract FASTA from EMBL
2: $PFSEARCHV3 -n -t 1 -f ./ecp.prf $TMPDIR/CVPBR322.fa
2: 63.920 271 pos. 1 - 41 CVPBR322
2: 45.534 240 pos. 25 - 65 CVPBR322
2: 55.617 257 pos. 1589 - 1629 CVPBR322
2: 46.720 242 pos. 2274 - 2314 CVPBR322
2: 48.500 245 pos. 2296 - 2340 CVPBR322
2: 64.513 272 pos. 2931 - 2972 CVPBR322
2: 50.872 249 pos. 3207 - 3246 CVPBR322
2: 45.534 240 pos. 3233 - 3274 CVPBR322
2: 53.244 253 pos. 3240 - 3284 CVPBR322
2: 52.058 251 pos. 3350 - 3391 CVPBR322
2: 53.837 254 pos. 3788 - 3828 CVPBR322
2: 46.127 241 pos. 3796 - 3836 CVPBR322
2: 56.210 258 pos. 4133 - 4173 CVPBR322
2: 53.244 253 pos. 4166 - 4207 CVPBR322
2: 52.058 251 pos. 4187 - 4227 CVPBR322
2: 56.803 259 pos. 4273 - 4312 CVPBR322
2: 47.906 244 pos. 4291 - 4331 CVPBR322
2: 47.906 244 pos. 4299 - 4342 CVPBR322
2: $PFSCANV3 -n -t 1 -f ./ecp.prf $TMPDIR/CVPBR322.fa
2: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
2: L=2 63.920 271 pos. 1 - 41 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 45.534 240 pos. 25 - 65 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=2 55.617 257 pos. 1589 - 1629 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 46.720 242 pos. 2274 - 2314 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 48.500 245 pos. 2296 - 2340 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=2 64.513 272 pos. 2931 - 2972 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 50.872 249 pos. 3207 - 3246 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 45.534 240 pos. 3233 - 3274 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 53.244 253 pos. 3240 - 3284 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 52.058 251 pos. 3350 - 3391 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 53.837 254 pos. 3788 - 3828 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 46.127 241 pos. 3796 - 3836 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=2 56.210 258 pos. 4133 - 4173 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 53.244 253 pos. 4166 - 4207 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=1 52.058 251 pos. 4187 - 4227 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=2 56.803 259 pos. 4273 - 4312 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 47.906 244 pos. 4291 - 4331 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2: L=0 47.906 244 pos. 4299 - 4342 NS00001|ECOLI_PROM_RP70 E. coli RNA POL sigma-70 promoter.
2:
2: $PFSEARCHV3 -n -t 1 -q ./hiv.prf ./hiv.fastq # FASTQ
2: 30.200 3020 pos. 1 - 75 VBT43:00033:00068 Length=75
2: 30.640 3064 pos. 51 - 113 VBT43:00042:00214 Length=113
2: 39.930 3993 pos. 2 - 81 VBT43:00046:00240 Length=81
2: 17.170 1717 pos. 1 - 36 VBT43:00018:00254 Length=39
2: 55.070 5507 pos. 1 - 125 VBT43:00021:00272 Length=125
2: 55.340 5534 pos. 1 - 128 VBT43:00035:00274 Length=128
2: 47.950 4795 pos. 1 - 108 VBT43:00037:00292 Length=108
2: 54.940 5494 pos. 1 - 119 VBT43:00014:00314 Length=119
2: 26.780 2678 pos. 1 - 54 VBT43:00017:00332 Length=62
2: 51.610 5161 pos. 1 - 137 VBT43:00039:00346 Length=137
2: 56.650 5665 pos. 1 - 125 VBT43:00045:00317 Length=126
2: 34.640 3464 pos. 1 - 70 VBT43:00027:00364 Length=70
2: 66.710 6671 pos. 1 - 131 VBT43:00042:00499 Length=138
2: 30.130 3013 pos. 106 - 167 VBT43:00017:00696 Length=167
2: 42.420 4242 pos. 2 - 104 VBT43:00023:00665 Length=104
2: 39.300 3930 pos. 1 - 88 VBT43:00029:00750 Length=89
2: 55.880 5588 pos. 1 - 156 VBT43:00037:00780 Length=158
2: 55.640 5564 pos. 1 - 133 VBT43:00027:00977 Length=133
2: 58.320 5832 pos. 2 - 118 VBT43:00047:00970 Length=118
2: 43.150 4315 pos. 1 - 91 VBT43:00011:01001 Length=91
2: 84.960 8496 pos. 1 - 186 VBT43:00048:01010 Length=186
2: 80.790 8079 pos. 1 - 182 VBT43:00036:01093 Length=182
2: 24.720 2472 pos. 80 - 130 VBT43:00048:01143 Length=130
2: 53.290 5329 pos. 1 - 103 VBT43:00008:01197 Length=103
2: 49.100 4910 pos. 1 - 98 VBT43:00046:01178 Length=98
2: 36.440 3644 pos. 5 - 85 VBT43:00022:01216 Length=85
2: 25.140 2514 pos. 1 - 52 VBT43:00017:01288 Length=111
2: 72.710 7271 pos. 1 - 149 VBT43:00025:01284 Length=149
2: 45.760 4576 pos. 1 - 110 VBT43:00041:01311 Length=113
2: 48.000 4800 pos. 4 - 105 VBT43:00049:01371 Length=105
2: 57.670 5767 pos. 1 - 127 VBT43:00023:01679 Length=127
2: 44.430 4443 pos. 2 - 92 VBT43:00024:01846 Length=92
2: 22.350 2235 pos. 1 - 51 VBT43:00025:01897 Length=196
2: 54.290 5429 pos. 65 - 183 VBT43:00034:01890 Length=183
2: 26.000 2600 pos. 1 - 53 VBT43:00027:01904 Length=53
2: 55.880 5588 pos. 1 - 108 VBT43:00037:01920 Length=115
2: 69.080 6908 pos. 1 - 139 VBT43:00048:01921 Length=139
2: 23.950 2395 pos. 1 - 52 VBT43:00035:01950 Length=218
2: 30.300 3030 pos. 1 - 60 VBT43:00061:00027 Length=67
2: 45.250 4525 pos. 1 - 92 VBT43:00060:00064 Length=92
2: 32.150 3215 pos. 1 - 68 VBT43:00085:00090 Length=68
2: 68.510 6851 pos. 1 - 146 VBT43:00060:00142 Length=146
2: 52.630 5263 pos. 1 - 110 VBT43:00062:00112 Length=110
2: 64.620 6462 pos. 2 - 156 VBT43:00063:00101 Length=161
2: 43.860 4386 pos. 1 - 93 VBT43:00063:00107 Length=93
2: 25.140 2514 pos. 1 - 52 VBT43:00071:00106 Length=156
2: 58.270 5827 pos. 1 - 131 VBT43:00072:00113 Length=131
2: 107.470 10747 pos. 1 - 220 VBT43:00072:00198 Length=220
2: 53.030 5303 pos. 1 - 119 VBT43:00081:00153 Length=119
2: 64.500 6450 pos. 1 - 136 VBT43:00085:00151 Length=136
2: 21.000 2100 pos. 77 - 120 VBT43:00098:00159 Length=120
2: 58.580 5858 pos. 1 - 139 VBT43:00056:00208 Length=164
2: 39.020 3902 pos. 1 - 79 VBT43:00057:00227 Length=79
2: 106.080 10608 pos. 1 - 254 VBT43:00058:00219 Length=254
2: 74.080 7408 pos. 1 - 161 VBT43:00058:00220 Length=161
2: 39.640 3964 pos. 1 - 88 VBT43:00067:00200 Length=88
2: 48.750 4875 pos. 93 - 190 VBT43:00076:00240 Length=190
2: 57.840 5784 pos. 1 - 120 VBT43:00088:00234 Length=120
2: 42.730 4273 pos. 1 - 83 VBT43:00090:00226 Length=83
2: 80.010 8001 pos. 1 - 172 VBT43:00094:00222 Length=173
2: 42.270 4227 pos. 1 - 109 VBT43:00098:00230 Length=110
2: 73.050 7305 pos. 1 - 164 VBT43:00050:00287 Length=164
2: 53.490 5349 pos. 1 - 114 VBT43:00051:00295 Length=114
2: 21.920 2192 pos. 2 - 70 VBT43:00053:00282 Length=70
2: 49.780 4978 pos. 34 - 133 VBT43:00056:00270 Length=133
2: 35.110 3511 pos. 1 - 69 VBT43:00061:00257 Length=78
2: 96.990 9699 pos. 1 - 235 VBT43:00068:00271 Length=238
2: 66.050 6605 pos. 1 - 146 VBT43:00086:00286 Length=146
2: 25.140 2514 pos. 1 - 52 VBT43:00063:00330 Length=227
2: 14.990 1499 pos. 1 - 33 VBT43:00092:00308 Length=174
2: 65.470 6547 pos. 1 - 141 VBT43:00073:00350 Length=141
2: 58.320 5832 pos. 1 - 121 VBT43:00077:00483 Length=121
2: 76.900 7690 pos. 1 - 157 VBT43:00078:00474 Length=157
2: 78.380 7838 pos. 1 - 192 VBT43:00055:00547 Length=192
2: 41.830 4183 pos. 1 - 85 VBT43:00060:00510 Length=87
2: 24.170 2417 pos. 1 - 52 VBT43:00092:00531 Length=185
2: 40.900 4090 pos. 1 - 79 VBT43:00072:00550 Length=79
2: 40.140 4014 pos. 1 - 92 VBT43:00059:00623 Length=92
2: 25.140 2514 pos. 1 - 52 VBT43:00081:00626 Length=234
2: 20.670 2067 pos. 1 - 42 VBT43:00084:00619 Length=45
2: 56.600 5660 pos. 1 - 123 VBT43:00085:00660 Length=124
2: 37.460 3746 pos. 2 - 81 VBT43:00090:00698 Length=81
2: 69.340 6934 pos. 1 - 145 VBT43:00077:00700 Length=145
2: 49.130 4913 pos. 1 - 116 VBT43:00083:00736 Length=116
2: 67.670 6767 pos. 1 - 142 VBT43:00074:00791 Length=142
2: 100.770 10077 pos. 1 - 214 VBT43:00092:00779 Length=214
2: 78.630 7863 pos. 1 - 177 VBT43:00067:00804 Length=177
2: 34.680 3468 pos. 1 - 69 VBT43:00092:00888 Length=69
2: 61.290 6129 pos. 1 - 129 VBT43:00067:00937 Length=129
2: 24.070 2407 pos. 1 - 50 VBT43:00077:00922 Length=165
2: 39.950 3995 pos. 1 - 87 VBT43:00086:00913 Length=88
2: 51.660 5166 pos. 1 - 113 VBT43:00095:00911 Length=113
2: 30.580 3058 pos. 1 - 70 VBT43:00055:01032 Length=70
2: 44.150 4415 pos. 4 - 110 VBT43:00056:01041 Length=110
2: 67.790 6779 pos. 2 - 139 VBT43:00098:01003 Length=139
2: 90.360 9036 pos. 1 - 192 VBT43:00056:01063 Length=192
2: 66.010 6601 pos. 1 - 142 VBT43:00083:01091 Length=142
2: 58.910 5891 pos. 1 - 135 VBT43:00073:01128 Length=135
2: 84.970 8497 pos. 1 - 202 VBT43:00084:01101 Length=202
2: 48.440 4844 pos. 1 - 104 VBT43:00086:01119 Length=104
2: 16.590 1659 pos. 1 - 36 VBT43:00087:01101 Length=178
2: 24.720 2472 pos. 10 - 60 VBT43:00093:01114 Length=60
2: 69.540 6954 pos. 1 - 155 VBT43:00071:01154 Length=155
2: 20.470 2047 pos. 47 - 89 VBT43:00098:01157 Length=89
2: 99.840 9984 pos. 1 - 214 VBT43:00077:01225 Length=214
2: 55.450 5545 pos. 1 - 132 VBT43:00069:01271 Length=132
2: 59.270 5927 pos. 55 - 180 VBT43:00076:01276 Length=180
2: 62.530 6253 pos. 43 - 178 VBT43:00083:01281 Length=178
2: 72.060 7206 pos. 1 - 146 VBT43:00075:01347 Length=146
2: 61.030 6103 pos. 1 - 135 VBT43:00081:01302 Length=135
2: 66.470 6647 pos. 1 - 149 VBT43:00085:01305 Length=149
2: 22.210 2221 pos. 1 - 45 VBT43:00078:01350 Length=45
2: 74.440 7444 pos. 1 - 156 VBT43:00080:01356 Length=156
2: 32.800 3280 pos. 1 - 81 VBT43:00086:01351 Length=81
2: 62.840 6284 pos. 1 - 131 VBT43:00096:01363 Length=131
2: 101.910 10191 pos. 1 - 217 VBT43:00087:01578 Length=217
2: 101.180 10118 pos. 1 - 217 VBT43:00059:01626 Length=217
2: 36.720 3672 pos. 1 - 74 VBT43:00078:01624 Length=74
2: 74.860 7486 pos. 1 - 178 VBT43:00095:01600 Length=180
2: 23.860 2386 pos. 1 - 52 VBT43:00053:01704 Length=215
2: 31.120 3112 pos. 1 - 61 VBT43:00083:01743 Length=64
2: 36.780 3678 pos. 10 - 86 VBT43:00061:01797 Length=86
2: 94.500 9450 pos. 1 - 210 VBT43:00089:01765 Length=210
2: 20.940 2094 pos. 1 - 41 VBT43:00065:01835 Length=41
2: 40.110 4011 pos. 46 - 128 VBT43:00080:01832 Length=128
2: 68.540 6854 pos. 1 - 154 VBT43:00081:01825 Length=154
2: 89.560 8956 pos. 7 - 190 VBT43:00052:01852 Length=190
2: 13.080 1308 pos. 1 - 31 VBT43:00054:01870 Length=31
2: 54.780 5478 pos. 1 - 116 VBT43:00059:01889 Length=116
2: 23.330 2333 pos. 1 - 51 VBT43:00061:01851 Length=234
2: 48.790 4879 pos. 1 - 100 VBT43:00076:01869 Length=100
2: 28.050 2805 pos. 1 - 57 VBT43:00076:01886 Length=57
2: 53.610 5361 pos. 1 - 122 VBT43:00081:01896 Length=122
2: 83.670 8367 pos. 1 - 182 VBT43:00055:01942 Length=182
2: 91.200 9120 pos. 1 - 190 VBT43:00063:01947 Length=190
2: 76.310 7631 pos. 1 - 168 VBT43:00078:01905 Length=168
2: 109.820 10982 pos. 1 - 240 VBT43:00085:01949 Length=240
2: 71.270 7127 pos. 1 - 160 VBT43:00095:01931 Length=160
2: 53.570 5357 pos. 1 - 138 VBT43:00098:01928 Length=138
2: 50.930 5093 pos. 1 - 112 VBT43:00053:01968 Length=112
2: 49.900 4990 pos. 2 - 109 VBT43:00066:01963 Length=110
2: 66.840 6684 pos. 1 - 149 VBT43:00081:01994 Length=149
2: 23.530 2353 pos. 1 - 53 VBT43:00051:02023 Length=53
2: 61.620 6162 pos. 68 - 216 VBT43:00066:02013 Length=216
2: 60.190 6019 pos. 3 - 133 VBT43:00075:02041 Length=133
2: 80.450 8045 pos. 1 - 188 VBT43:00080:02033 Length=191
2: 73.720 7372 pos. 7 - 164 VBT43:00084:02011 Length=164
2: 71.360 7136 pos. 1 - 164 VBT43:00086:02038 Length=164
2: 45.330 4533 pos. 1 - 88 VBT43:00075:02096 Length=88
2: 69.810 6981 pos. 1 - 154 VBT43:00077:02099 Length=160
2: 36.560 3656 pos. 1 - 73 VBT43:00097:02073 Length=73
2: 36.810 3681 pos. 5 - 89 VBT43:00099:02118 Length=89
2: 41.540 4154 pos. 1 - 106 VBT43:00109:00068 Length=119
2: 18.470 1847 pos. 1 - 53 VBT43:00111:00062 Length=141
2: 51.590 5159 pos. 5 - 137 VBT43:00119:00068 Length=137
2: 60.320 6032 pos. 1 - 130 VBT43:00122:00075 Length=130
2: 86.500 8650 pos. 1 - 179 VBT43:00128:00076 Length=179
2: 62.280 6228 pos. 1 - 152 VBT43:00133:00059 Length=152
2: 60.050 6005 pos. 1 - 126 VBT43:00134:00059 Length=126
2: 47.540 4754 pos. 1 - 106 VBT43:00141:00144 Length=106
2: 97.830 9783 pos. 1 - 205 VBT43:00104:00161 Length=205
2: 21.750 2175 pos. 1 - 45 VBT43:00106:00182 Length=47
2: 63.310 6331 pos. 1 - 141 VBT43:00113:00153 Length=141
2: 55.440 5544 pos. 1 - 116 VBT43:00116:00189 Length=116
2: 57.820 5782 pos. 1 - 132 VBT43:00118:00165 Length=134
2: 97.920 9792 pos. 1 - 209 VBT43:00134:00239 Length=209
2: 18.320 1832 pos. 43 - 81 VBT43:00138:00245 Length=81
2: 28.900 2890 pos. 27 - 85 VBT43:00142:00224 Length=85
2: 65.860 6586 pos. 1 - 153 VBT43:00105:00289 Length=153
2: 70.810 7081 pos. 1 - 178 VBT43:00108:00260 Length=178
2: 86.950 8695 pos. 1 - 187 VBT43:00114:00297 Length=187
2: 71.960 7196 pos. 1 - 153 VBT43:00120:00290 Length=153
2: 50.650 5065 pos. 1 - 114 VBT43:00142:00289 Length=114
2: 90.570 9057 pos. 1 - 189 VBT43:00145:00269 Length=191
2: 81.490 8149 pos. 1 - 169 VBT43:00116:00302 Length=169
2: 58.730 5873 pos. 1 - 128 VBT43:00117:00317 Length=128
2: 93.730 9373 pos. 1 - 210 VBT43:00111:00367 Length=211
2: 24.970 2497 pos. 31 - 84 VBT43:00111:00544 Length=84
2: 72.290 7229 pos. 1 - 150 VBT43:00117:00523 Length=150
2: 42.150 4215 pos. 1 - 96 VBT43:00124:00503 Length=96
2: 13.180 1318 pos. 1 - 25 VBT43:00124:00512 Length=25
2: 67.430 6743 pos. 1 - 167 VBT43:00106:00591 Length=167
2: 25.680 2568 pos. 1 - 53 VBT43:00133:00591 Length=174
2: 33.990 3399 pos. 1 - 75 VBT43:00141:00563 Length=75
2: 75.500 7550 pos. 1 - 156 VBT43:00103:00637 Length=156
2: 82.920 8292 pos. 1 - 168 VBT43:00109:00642 Length=168
2: 49.170 4917 pos. 1 - 114 VBT43:00129:00602 Length=114
2: 22.290 2229 pos. 1 - 48 VBT43:00137:00609 Length=151
2: 49.510 4951 pos. 1 - 114 VBT43:00108:00663 Length=114
2: 84.710 8471 pos. 1 - 173 VBT43:00108:00668 Length=173
2: 83.750 8375 pos. 1 - 181 VBT43:00135:00688 Length=199
2: 24.170 2417 pos. 1 - 52 VBT43:00136:00687 Length=156
2: 42.150 4215 pos. 1 - 92 VBT43:00141:00654 Length=92
2: 27.560 2756 pos. 2 - 67 VBT43:00133:00701 Length=67
2: 55.410 5541 pos. 11 - 123 VBT43:00125:00766 Length=123
2: 60.900 6090 pos. 1 - 147 VBT43:00131:00771 Length=147
2: 21.920 2192 pos. 1 - 46 VBT43:00143:00796 Length=198
2: 83.640 8364 pos. 1 - 184 VBT43:00147:00794 Length=184
2: 61.030 6103 pos. 1 - 135 VBT43:00149:00791 Length=135
2: 64.480 6448 pos. 1 - 145 VBT43:00105:00812 Length=145
2: 92.600 9260 pos. 1 - 197 VBT43:00129:00845 Length=197
2: 85.440 8544 pos. 1 - 174 VBT43:00105:00860 Length=174
2: 54.660 5466 pos. 1 - 114 VBT43:00108:00862 Length=114
2: 62.250 6225 pos. 6 - 132 VBT43:00122:00854 Length=136
2: 41.900 4190 pos. 1 - 92 VBT43:00128:00870 Length=92
2: 99.650 9965 pos. 1 - 218 VBT43:00145:00853 Length=220
2: 93.580 9358 pos. 1 - 190 VBT43:00101:00937 Length=190
2: 84.660 8466 pos. 1 - 185 VBT43:00104:00911 Length=185
2: 76.140 7614 pos. 1 - 167 VBT43:00110:00920 Length=167
2: 34.920 3492 pos. 132 - 202 VBT43:00114:00936 Length=202
2: 43.100 4310 pos. 1 - 88 VBT43:00126:00917 Length=88
2: 66.070 6607 pos. 1 - 162 VBT43:00129:00942 Length=166
2: 17.740 1774 pos. 1 - 48 VBT43:00134:00937 Length=48
2: 64.350 6435 pos. 1 - 155 VBT43:00141:00902 Length=155
2: $PFSCANV3 -n -t 1 -q ./hiv.prf ./hiv.fastq # FASTQ
2: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
2: L=0 30.200 3020 pos. 1 - 75 NOTANAC|HIV Profile for testing
2: L=0 30.640 3064 pos. 51 - 113 NOTANAC|HIV Profile for testing
2: L=0 39.930 3993 pos. 2 - 81 NOTANAC|HIV Profile for testing
2: L=0 17.170 1717 pos. 1 - 36 NOTANAC|HIV Profile for testing
2: L=0 55.070 5507 pos. 1 - 125 NOTANAC|HIV Profile for testing
2: L=0 55.340 5534 pos. 1 - 128 NOTANAC|HIV Profile for testing
2: L=0 47.950 4795 pos. 1 - 108 NOTANAC|HIV Profile for testing
2: L=0 54.940 5494 pos. 1 - 119 NOTANAC|HIV Profile for testing
2: L=0 26.780 2678 pos. 1 - 54 NOTANAC|HIV Profile for testing
2: L=0 51.610 5161 pos. 1 - 137 NOTANAC|HIV Profile for testing
2: L=0 56.650 5665 pos. 1 - 125 NOTANAC|HIV Profile for testing
2: L=0 34.640 3464 pos. 1 - 70 NOTANAC|HIV Profile for testing
2: L=0 66.710 6671 pos. 1 - 131 NOTANAC|HIV Profile for testing
2: L=0 30.130 3013 pos. 106 - 167 NOTANAC|HIV Profile for testing
2: L=0 42.420 4242 pos. 2 - 104 NOTANAC|HIV Profile for testing
2: L=0 39.300 3930 pos. 1 - 88 NOTANAC|HIV Profile for testing
2: L=0 55.880 5588 pos. 1 - 156 NOTANAC|HIV Profile for testing
2: L=0 55.640 5564 pos. 1 - 133 NOTANAC|HIV Profile for testing
2: L=0 58.320 5832 pos. 2 - 118 NOTANAC|HIV Profile for testing
2: L=0 43.150 4315 pos. 1 - 91 NOTANAC|HIV Profile for testing
2: L=0 84.960 8496 pos. 1 - 186 NOTANAC|HIV Profile for testing
2: L=0 80.790 8079 pos. 1 - 182 NOTANAC|HIV Profile for testing
2: L=0 24.720 2472 pos. 80 - 130 NOTANAC|HIV Profile for testing
2: L=0 53.290 5329 pos. 1 - 103 NOTANAC|HIV Profile for testing
2: L=0 49.100 4910 pos. 1 - 98 NOTANAC|HIV Profile for testing
2: L=0 36.440 3644 pos. 5 - 85 NOTANAC|HIV Profile for testing
2: L=0 25.140 2514 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 72.710 7271 pos. 1 - 149 NOTANAC|HIV Profile for testing
2: L=0 45.760 4576 pos. 1 - 110 NOTANAC|HIV Profile for testing
2: L=0 48.000 4800 pos. 4 - 105 NOTANAC|HIV Profile for testing
2: L=0 57.670 5767 pos. 1 - 127 NOTANAC|HIV Profile for testing
2: L=0 44.430 4443 pos. 2 - 92 NOTANAC|HIV Profile for testing
2: L=0 22.350 2235 pos. 1 - 51 NOTANAC|HIV Profile for testing
2: L=0 54.290 5429 pos. 65 - 183 NOTANAC|HIV Profile for testing
2: L=0 26.000 2600 pos. 1 - 53 NOTANAC|HIV Profile for testing
2: L=0 55.880 5588 pos. 1 - 108 NOTANAC|HIV Profile for testing
2: L=0 69.080 6908 pos. 1 - 139 NOTANAC|HIV Profile for testing
2: L=0 23.950 2395 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 30.300 3030 pos. 1 - 60 NOTANAC|HIV Profile for testing
2: L=0 45.250 4525 pos. 1 - 92 NOTANAC|HIV Profile for testing
2: L=0 32.150 3215 pos. 1 - 68 NOTANAC|HIV Profile for testing
2: L=0 68.510 6851 pos. 1 - 146 NOTANAC|HIV Profile for testing
2: L=0 52.630 5263 pos. 1 - 110 NOTANAC|HIV Profile for testing
2: L=0 64.620 6462 pos. 2 - 156 NOTANAC|HIV Profile for testing
2: L=0 43.860 4386 pos. 1 - 93 NOTANAC|HIV Profile for testing
2: L=0 25.140 2514 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 58.270 5827 pos. 1 - 131 NOTANAC|HIV Profile for testing
2: L=0 107.470 10747 pos. 1 - 220 NOTANAC|HIV Profile for testing
2: L=0 53.030 5303 pos. 1 - 119 NOTANAC|HIV Profile for testing
2: L=0 64.500 6450 pos. 1 - 136 NOTANAC|HIV Profile for testing
2: L=0 21.000 2100 pos. 77 - 120 NOTANAC|HIV Profile for testing
2: L=0 58.580 5858 pos. 1 - 139 NOTANAC|HIV Profile for testing
2: L=0 39.020 3902 pos. 1 - 79 NOTANAC|HIV Profile for testing
2: L=0 106.080 10608 pos. 1 - 254 NOTANAC|HIV Profile for testing
2: L=0 74.080 7408 pos. 1 - 161 NOTANAC|HIV Profile for testing
2: L=0 39.640 3964 pos. 1 - 88 NOTANAC|HIV Profile for testing
2: L=0 48.750 4875 pos. 93 - 190 NOTANAC|HIV Profile for testing
2: L=0 57.840 5784 pos. 1 - 120 NOTANAC|HIV Profile for testing
2: L=0 42.730 4273 pos. 1 - 83 NOTANAC|HIV Profile for testing
2: L=0 80.010 8001 pos. 1 - 172 NOTANAC|HIV Profile for testing
2: L=0 42.270 4227 pos. 1 - 109 NOTANAC|HIV Profile for testing
2: L=0 73.050 7305 pos. 1 - 164 NOTANAC|HIV Profile for testing
2: L=0 53.490 5349 pos. 1 - 114 NOTANAC|HIV Profile for testing
2: L=0 21.920 2192 pos. 2 - 70 NOTANAC|HIV Profile for testing
2: L=0 49.780 4978 pos. 34 - 133 NOTANAC|HIV Profile for testing
2: L=0 35.110 3511 pos. 1 - 69 NOTANAC|HIV Profile for testing
2: L=0 96.990 9699 pos. 1 - 235 NOTANAC|HIV Profile for testing
2: L=0 66.050 6605 pos. 1 - 146 NOTANAC|HIV Profile for testing
2: L=0 25.140 2514 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 14.990 1499 pos. 1 - 33 NOTANAC|HIV Profile for testing
2: L=0 65.470 6547 pos. 1 - 141 NOTANAC|HIV Profile for testing
2: L=0 58.320 5832 pos. 1 - 121 NOTANAC|HIV Profile for testing
2: L=0 76.900 7690 pos. 1 - 157 NOTANAC|HIV Profile for testing
2: L=0 78.380 7838 pos. 1 - 192 NOTANAC|HIV Profile for testing
2: L=0 41.830 4183 pos. 1 - 85 NOTANAC|HIV Profile for testing
2: L=0 24.170 2417 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 40.900 4090 pos. 1 - 79 NOTANAC|HIV Profile for testing
2: L=0 40.140 4014 pos. 1 - 92 NOTANAC|HIV Profile for testing
2: L=0 25.140 2514 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 20.670 2067 pos. 1 - 42 NOTANAC|HIV Profile for testing
2: L=0 56.600 5660 pos. 1 - 123 NOTANAC|HIV Profile for testing
2: L=0 37.460 3746 pos. 2 - 81 NOTANAC|HIV Profile for testing
2: L=0 69.340 6934 pos. 1 - 145 NOTANAC|HIV Profile for testing
2: L=0 49.130 4913 pos. 1 - 116 NOTANAC|HIV Profile for testing
2: L=0 67.670 6767 pos. 1 - 142 NOTANAC|HIV Profile for testing
2: L=0 100.770 10077 pos. 1 - 214 NOTANAC|HIV Profile for testing
2: L=0 78.630 7863 pos. 1 - 177 NOTANAC|HIV Profile for testing
2: L=0 34.680 3468 pos. 1 - 69 NOTANAC|HIV Profile for testing
2: L=0 61.290 6129 pos. 1 - 129 NOTANAC|HIV Profile for testing
2: L=0 24.070 2407 pos. 1 - 50 NOTANAC|HIV Profile for testing
2: L=0 39.950 3995 pos. 1 - 87 NOTANAC|HIV Profile for testing
2: L=0 51.660 5166 pos. 1 - 113 NOTANAC|HIV Profile for testing
2: L=0 30.580 3058 pos. 1 - 70 NOTANAC|HIV Profile for testing
2: L=0 44.150 4415 pos. 4 - 110 NOTANAC|HIV Profile for testing
2: L=0 67.790 6779 pos. 2 - 139 NOTANAC|HIV Profile for testing
2: L=0 90.360 9036 pos. 1 - 192 NOTANAC|HIV Profile for testing
2: L=0 66.010 6601 pos. 1 - 142 NOTANAC|HIV Profile for testing
2: L=0 58.910 5891 pos. 1 - 135 NOTANAC|HIV Profile for testing
2: L=0 84.970 8497 pos. 1 - 202 NOTANAC|HIV Profile for testing
2: L=0 48.440 4844 pos. 1 - 104 NOTANAC|HIV Profile for testing
2: L=0 16.590 1659 pos. 1 - 36 NOTANAC|HIV Profile for testing
2: L=0 24.720 2472 pos. 10 - 60 NOTANAC|HIV Profile for testing
2: L=0 69.540 6954 pos. 1 - 155 NOTANAC|HIV Profile for testing
2: L=0 20.470 2047 pos. 47 - 89 NOTANAC|HIV Profile for testing
2: L=0 99.840 9984 pos. 1 - 214 NOTANAC|HIV Profile for testing
2: L=0 55.450 5545 pos. 1 - 132 NOTANAC|HIV Profile for testing
2: L=0 59.270 5927 pos. 55 - 180 NOTANAC|HIV Profile for testing
2: L=0 62.530 6253 pos. 43 - 178 NOTANAC|HIV Profile for testing
2: L=0 72.060 7206 pos. 1 - 146 NOTANAC|HIV Profile for testing
2: L=0 61.030 6103 pos. 1 - 135 NOTANAC|HIV Profile for testing
2: L=0 66.470 6647 pos. 1 - 149 NOTANAC|HIV Profile for testing
2: L=0 22.210 2221 pos. 1 - 45 NOTANAC|HIV Profile for testing
2: L=0 74.440 7444 pos. 1 - 156 NOTANAC|HIV Profile for testing
2: L=0 32.800 3280 pos. 1 - 81 NOTANAC|HIV Profile for testing
2: L=0 62.840 6284 pos. 1 - 131 NOTANAC|HIV Profile for testing
2: L=0 101.910 10191 pos. 1 - 217 NOTANAC|HIV Profile for testing
2: L=0 101.180 10118 pos. 1 - 217 NOTANAC|HIV Profile for testing
2: L=0 36.720 3672 pos. 1 - 74 NOTANAC|HIV Profile for testing
2: L=0 74.860 7486 pos. 1 - 178 NOTANAC|HIV Profile for testing
2: L=0 23.860 2386 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 31.120 3112 pos. 1 - 61 NOTANAC|HIV Profile for testing
2: L=0 36.780 3678 pos. 10 - 86 NOTANAC|HIV Profile for testing
2: L=0 94.500 9450 pos. 1 - 210 NOTANAC|HIV Profile for testing
2: L=0 20.940 2094 pos. 1 - 41 NOTANAC|HIV Profile for testing
2: L=0 40.110 4011 pos. 46 - 128 NOTANAC|HIV Profile for testing
2: L=0 68.540 6854 pos. 1 - 154 NOTANAC|HIV Profile for testing
2: L=0 89.560 8956 pos. 7 - 190 NOTANAC|HIV Profile for testing
2: L=0 13.080 1308 pos. 1 - 31 NOTANAC|HIV Profile for testing
2: L=0 54.780 5478 pos. 1 - 116 NOTANAC|HIV Profile for testing
2: L=0 23.330 2333 pos. 1 - 51 NOTANAC|HIV Profile for testing
2: L=0 48.790 4879 pos. 1 - 100 NOTANAC|HIV Profile for testing
2: L=0 28.050 2805 pos. 1 - 57 NOTANAC|HIV Profile for testing
2: L=0 53.610 5361 pos. 1 - 122 NOTANAC|HIV Profile for testing
2: L=0 83.670 8367 pos. 1 - 182 NOTANAC|HIV Profile for testing
2: L=0 91.200 9120 pos. 1 - 190 NOTANAC|HIV Profile for testing
2: L=0 76.310 7631 pos. 1 - 168 NOTANAC|HIV Profile for testing
2: L=0 109.820 10982 pos. 1 - 240 NOTANAC|HIV Profile for testing
2: L=0 71.270 7127 pos. 1 - 160 NOTANAC|HIV Profile for testing
2: L=0 53.570 5357 pos. 1 - 138 NOTANAC|HIV Profile for testing
2: L=0 50.930 5093 pos. 1 - 112 NOTANAC|HIV Profile for testing
2: L=0 49.900 4990 pos. 2 - 109 NOTANAC|HIV Profile for testing
2: L=0 66.840 6684 pos. 1 - 149 NOTANAC|HIV Profile for testing
2: L=0 23.530 2353 pos. 1 - 53 NOTANAC|HIV Profile for testing
2: L=0 61.620 6162 pos. 68 - 216 NOTANAC|HIV Profile for testing
2: L=0 60.190 6019 pos. 3 - 133 NOTANAC|HIV Profile for testing
2: L=0 80.450 8045 pos. 1 - 188 NOTANAC|HIV Profile for testing
2: L=0 73.720 7372 pos. 7 - 164 NOTANAC|HIV Profile for testing
2: L=0 71.360 7136 pos. 1 - 164 NOTANAC|HIV Profile for testing
2: L=0 45.330 4533 pos. 1 - 88 NOTANAC|HIV Profile for testing
2: L=0 69.810 6981 pos. 1 - 154 NOTANAC|HIV Profile for testing
2: L=0 36.560 3656 pos. 1 - 73 NOTANAC|HIV Profile for testing
2: L=0 36.810 3681 pos. 5 - 89 NOTANAC|HIV Profile for testing
2: L=0 41.540 4154 pos. 1 - 106 NOTANAC|HIV Profile for testing
2: L=0 18.470 1847 pos. 1 - 53 NOTANAC|HIV Profile for testing
2: L=0 51.590 5159 pos. 5 - 137 NOTANAC|HIV Profile for testing
2: L=0 60.320 6032 pos. 1 - 130 NOTANAC|HIV Profile for testing
2: L=0 86.500 8650 pos. 1 - 179 NOTANAC|HIV Profile for testing
2: L=0 62.280 6228 pos. 1 - 152 NOTANAC|HIV Profile for testing
2: L=0 60.050 6005 pos. 1 - 126 NOTANAC|HIV Profile for testing
2: L=0 47.540 4754 pos. 1 - 106 NOTANAC|HIV Profile for testing
2: L=0 97.830 9783 pos. 1 - 205 NOTANAC|HIV Profile for testing
2: L=0 21.750 2175 pos. 1 - 45 NOTANAC|HIV Profile for testing
2: L=0 63.310 6331 pos. 1 - 141 NOTANAC|HIV Profile for testing
2: L=0 55.440 5544 pos. 1 - 116 NOTANAC|HIV Profile for testing
2: L=0 57.820 5782 pos. 1 - 132 NOTANAC|HIV Profile for testing
2: L=0 97.920 9792 pos. 1 - 209 NOTANAC|HIV Profile for testing
2: L=0 18.320 1832 pos. 43 - 81 NOTANAC|HIV Profile for testing
2: L=0 28.900 2890 pos. 27 - 85 NOTANAC|HIV Profile for testing
2: L=0 65.860 6586 pos. 1 - 153 NOTANAC|HIV Profile for testing
2: L=0 70.810 7081 pos. 1 - 178 NOTANAC|HIV Profile for testing
2: L=0 86.950 8695 pos. 1 - 187 NOTANAC|HIV Profile for testing
2: L=0 71.960 7196 pos. 1 - 153 NOTANAC|HIV Profile for testing
2: L=0 50.650 5065 pos. 1 - 114 NOTANAC|HIV Profile for testing
2: L=0 90.570 9057 pos. 1 - 189 NOTANAC|HIV Profile for testing
2: L=0 81.490 8149 pos. 1 - 169 NOTANAC|HIV Profile for testing
2: L=0 58.730 5873 pos. 1 - 128 NOTANAC|HIV Profile for testing
2: L=0 93.730 9373 pos. 1 - 210 NOTANAC|HIV Profile for testing
2: L=0 24.970 2497 pos. 31 - 84 NOTANAC|HIV Profile for testing
2: L=0 72.290 7229 pos. 1 - 150 NOTANAC|HIV Profile for testing
2: L=0 42.150 4215 pos. 1 - 96 NOTANAC|HIV Profile for testing
2: L=0 13.180 1318 pos. 1 - 25 NOTANAC|HIV Profile for testing
2: L=0 67.430 6743 pos. 1 - 167 NOTANAC|HIV Profile for testing
2: L=0 25.680 2568 pos. 1 - 53 NOTANAC|HIV Profile for testing
2: L=0 33.990 3399 pos. 1 - 75 NOTANAC|HIV Profile for testing
2: L=0 75.500 7550 pos. 1 - 156 NOTANAC|HIV Profile for testing
2: L=0 82.920 8292 pos. 1 - 168 NOTANAC|HIV Profile for testing
2: L=0 49.170 4917 pos. 1 - 114 NOTANAC|HIV Profile for testing
2: L=0 22.290 2229 pos. 1 - 48 NOTANAC|HIV Profile for testing
2: L=0 49.510 4951 pos. 1 - 114 NOTANAC|HIV Profile for testing
2: L=0 84.710 8471 pos. 1 - 173 NOTANAC|HIV Profile for testing
2: L=0 83.750 8375 pos. 1 - 181 NOTANAC|HIV Profile for testing
2: L=0 24.170 2417 pos. 1 - 52 NOTANAC|HIV Profile for testing
2: L=0 42.150 4215 pos. 1 - 92 NOTANAC|HIV Profile for testing
2: L=0 27.560 2756 pos. 2 - 67 NOTANAC|HIV Profile for testing
2: L=0 55.410 5541 pos. 11 - 123 NOTANAC|HIV Profile for testing
2: L=0 60.900 6090 pos. 1 - 147 NOTANAC|HIV Profile for testing
2: L=0 21.920 2192 pos. 1 - 46 NOTANAC|HIV Profile for testing
2: L=0 83.640 8364 pos. 1 - 184 NOTANAC|HIV Profile for testing
2: L=0 61.030 6103 pos. 1 - 135 NOTANAC|HIV Profile for testing
2: L=0 64.480 6448 pos. 1 - 145 NOTANAC|HIV Profile for testing
2: L=0 92.600 9260 pos. 1 - 197 NOTANAC|HIV Profile for testing
2: L=0 85.440 8544 pos. 1 - 174 NOTANAC|HIV Profile for testing
2: L=0 54.660 5466 pos. 1 - 114 NOTANAC|HIV Profile for testing
2: L=0 62.250 6225 pos. 6 - 132 NOTANAC|HIV Profile for testing
2: L=0 41.900 4190 pos. 1 - 92 NOTANAC|HIV Profile for testing
2: L=0 99.650 9965 pos. 1 - 218 NOTANAC|HIV Profile for testing
2: L=0 93.580 9358 pos. 1 - 190 NOTANAC|HIV Profile for testing
2: L=0 84.660 8466 pos. 1 - 185 NOTANAC|HIV Profile for testing
2: L=0 76.140 7614 pos. 1 - 167 NOTANAC|HIV Profile for testing
2: L=0 34.920 3492 pos. 132 - 202 NOTANAC|HIV Profile for testing
2: L=0 43.100 4310 pos. 1 - 88 NOTANAC|HIV Profile for testing
2: L=0 66.070 6607 pos. 1 - 162 NOTANAC|HIV Profile for testing
2: L=0 17.740 1774 pos. 1 - 48 NOTANAC|HIV Profile for testing
2: L=0 64.350 6435 pos. 1 - 155 NOTANAC|HIV Profile for testing
2:
2: #----------------------------------------------------------------------#
2: # The following output formats are preserved between V2 and V3
2: #
2: # Default output mode:
2: #----------------------------------------------------------------------#
2: $PFSEARCH -f ./sh3.prf ./VAV_HUMAN.seq | sort -nr > $TMPDIR/sh3.VAV_HUMAN.2.hit
2: $PFSEARCHV3 -n -f ./sh3.prf ./VAV_HUMAN.seq | sort -nr > $TMPDIR/sh3.VAV_HUMAN.3.hit
2: diff -b $TMPDIR/sh3.VAV_HUMAN.2.hit $TMPDIR/sh3.VAV_HUMAN.3.hit # expecting no difference
2:
2: $PFSEARCH -fb ./ecp.prf $TMPDIR/CVPBR322.fa | sort -nr > $TMPDIR/ecp.CVPBR322.2.hit
2: $PFSEARCHV3 -n -fb ./ecp.prf $TMPDIR/CVPBR322.fa | sort -nr > $TMPDIR/ecp.CVPBR322.3.hit
2: diff -b $TMPDIR/ecp.CVPBR322.2.hit $TMPDIR/ecp.CVPBR322.3.hit # expecting no difference
2:
2: #----------------------------------------------------------------------#
2: # The different PSA (i.e FASTA) output formats differ by the content
2: # their headers. The usage of XPSA (-o 6) is strongly recommended, the
2: # other formats being preserved for legacy.
2: #----------------------------------------------------------------------#
2: $PFSEARCHV3 -n -f -o 1 -N 15 ./sh3.prf ./VAV_HUMAN.seq | $SORT_PSA -
2: >VAV_HUMAN L=0 17.560 1015 pos. 782 - 842 [ 1, -1] sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: KYFGTAKARYDFCARDRSELSLKEGDIIKILNKkGQQGWWRGEIY--GRVGWFPANYVEE
2: DYS
2: $PFSEARCHV3 -n -f -o 2 -N 15 ./sh3.prf ./VAV_HUMAN.seq | $SORT_PSA -
2: >sp|P15498|VAV_HUMAN/782-842 motif=PS50002|SH3 norm_score=17.560 raw_score=1015 seq_end=-4 motif_start=1 motif_end=-1
2: KYFGTAKARYDFCARDRSELSLKEGDIIKILNKkGQQGWWRGEIY--GRVGWFPANYVEE
2: DYS
2: $PFSEARCHV3 -n -f -o 3 -N 15 ./sh3.prf ./VAV_HUMAN.seq | $SORT_PSA -
2: >VAV_HUMAN 17.560 1015 pos. 782 - 842 sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
2: KYFGTAKARYDFCARDRSELSLKEGDIIKILNKkGQQGWWRGEIY--GRVGWFPANYVEE
2: DYS
2: $PFSEARCHV3 -n -f -o 4 -N 15 ./sh3.prf ./VAV_HUMAN.seq | $SORT_PSA -
2: >SH3 L=0 17.560 1015 pos. 782 - 842 [ 1, -1] PS50002|Src homology 3 (SH3) domain profile.
2: KYFGTAKARYDFCARDRSELSLKEGDIIKILNKkGQQGWWRGEIY--GRVGWFPANYVEE
2: DYS
2: $PFSEARCHV3 -n -f -o 6 -N 15 ./sh3.prf ./VAV_HUMAN.seq | $SORT_PSA - # recommended
2: >sp|P15498|VAV_HUMAN/782-842 motif=PS50002|SH3 norm_score=17.560 raw_score=1015 level=0 level_tag=! motif_start=1 motif_end=-1 seq_end=-4 motif_rev=F strand=+
2: KYFGTAKARYDFCARDRSELSLKEGDIIKILNKkGQQGWWRGEIY--GRVGWFPANYVEE
2: DYS
2:
2: #----------------------------------------------------------------------#
2: # Multiple sequence alignment (MSA) can easily be produced from PSA
2: # using psa2msa (V2)
2: #----------------------------------------------------------------------#
2: $PFSEARCHV3 -n -f -o 6 ./ecp.prf $TMPDIR/CVPBR322.fa | $SORT_PSA - | $PSA2MSA
2: >CVPBR322/1-41 motif=NS00001|ECOLI_PROM_RP70 norm_score=63.920 raw_score=271 level=2 level_tag=# motif_start=1 motif_end=-1 seq_end=-4321 motif_rev=F strand=+
2: TTCTCATGTTTGACAGCTTATCATC----GATAAGCTTTAATGCG
2: >CVPBR322/1589-1629 motif=NS00001|ECOLI_PROM_RP70 norm_score=55.617 raw_score=257 level=2 level_tag=# motif_start=1 motif_end=-1 seq_end=-2733 motif_rev=F strand=+
2: CAACATGAATGGTCTTCGGTTTCCG----TGTTTCGTAAAGTCTG
2: >CVPBR322/2274-2314 motif=NS00001|ECOLI_PROM_RP70 norm_score=46.720 raw_score=242 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-2048 motif_rev=F strand=+
2: CAGATTGTACTGAGAGTGCACCATA----TGCGGTGTGAAATACC
2: >CVPBR322/2296-2340 motif=NS00001|ECOLI_PROM_RP70 norm_score=48.500 raw_score=245 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-2022 motif_rev=F strand=+
2: ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC
2: >CVPBR322/25-65 motif=NS00001|ECOLI_PROM_RP70 norm_score=45.534 raw_score=240 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-4297 motif_rev=F strand=+
2: CGATAAGCTTTAATGCGGTAGTTTA----TCACAGTTAAATTGCT
2: >CVPBR322/2931-2972 motif=NS00001|ECOLI_PROM_RP70 norm_score=64.513 raw_score=272 level=2 level_tag=# motif_start=1 motif_end=-1 seq_end=-1390 motif_rev=F strand=+
2: ACAGAGTTCTTGAAGTGGTGGCCTA---ACTACGGCTACACTAGA
2: >CVPBR322/3207-3246 motif=NS00001|ECOLI_PROM_RP70 norm_score=50.872 raw_score=249 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-1116 motif_rev=F strand=+
2: AAAAGGATCTTCACCTAGATCCTTT-----TAAATTAAAAATGAA
2: >CVPBR322/3233-3274 motif=NS00001|ECOLI_PROM_RP70 norm_score=45.534 raw_score=240 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-1088 motif_rev=F strand=+
2: AAATTAAAAATGAAGTTTTAAATCA---ATCTAAAGTATATATGA
2: >CVPBR322/3240-3284 motif=NS00001|ECOLI_PROM_RP70 norm_score=53.244 raw_score=253 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-1078 motif_rev=F strand=+
2: AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG
2: >CVPBR322/3350-3391 motif=NS00001|ECOLI_PROM_RP70 norm_score=52.058 raw_score=251 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-971 motif_rev=F strand=+
2: CATAGTTGCCTGACTCCCCGTCGTG---TAGATAACTACGATACG
2: >CVPBR322/3788-3828 motif=NS00001|ECOLI_PROM_RP70 norm_score=53.837 raw_score=254 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-534 motif_rev=F strand=+
2: ACTGCATAATTCTCTTACTGTCATG----CCATCCGTAAGATGCT
2: >CVPBR322/3796-3836 motif=NS00001|ECOLI_PROM_RP70 norm_score=46.127 raw_score=241 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-526 motif_rev=F strand=+
2: ATTCTCTTACTGTCATGCCATCCGT----AAGATGCTTTTCTGTG
2: >CVPBR322/4133-4173 motif=NS00001|ECOLI_PROM_RP70 norm_score=56.210 raw_score=258 level=2 level_tag=# motif_start=1 motif_end=-1 seq_end=-189 motif_rev=F strand=+
2: ACGGAAATGTTGAATACTCATACTC----TTCCTTTTTCAATATT
2: >CVPBR322/4166-4207 motif=NS00001|ECOLI_PROM_RP70 norm_score=53.244 raw_score=253 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-155 motif_rev=F strand=+
2: TCAATATTATTGAAGCATTTATCAG---GGTTATTGTCTCATGAG
2: >CVPBR322/4187-4227 motif=NS00001|ECOLI_PROM_RP70 norm_score=52.058 raw_score=251 level=1 level_tag=# motif_start=1 motif_end=-1 seq_end=-135 motif_rev=F strand=+
2: TCAGGGTTATTGTCTCATGAGCGGA----TACATATTTGAATGTA
2: >CVPBR322/4273-4312 motif=NS00001|ECOLI_PROM_RP70 norm_score=56.803 raw_score=259 level=2 level_tag=# motif_start=1 motif_end=-1 seq_end=-50 motif_rev=F strand=+
2: AAGTGCCACCTGACGTCTAAGAAAC-----CATTATTATCATGAC
2: >CVPBR322/4291-4331 motif=NS00001|ECOLI_PROM_RP70 norm_score=47.906 raw_score=244 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-31 motif_rev=F strand=+
2: AAGAAACCATTATTATCATGACATT----AACCTATAAAAATAGG
2: >CVPBR322/4299-4342 motif=NS00001|ECOLI_PROM_RP70 norm_score=47.906 raw_score=244 level=0 level_tag=# motif_start=1 motif_end=-1 seq_end=-20 motif_rev=F strand=+
2: ATTATTATCATGACATTAACCTATA-AAAATAGGCGTATCACGAG
2:
2: #----------------------------------------------------------------------#
2: # V3 has two new output formats: TSV and SAM
2: #----------------------------------------------------------------------#
2:
2: $PFSEARCHV3 -n -t 1 -f -o 7 ./ecp.prf $TMPDIR/CVPBR322.fa # FASTA to TSV
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 1 41 271 63.920105 + TTCTCATGTTTGACAGCTTATCATC----GATAAGCTTTAATGCG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 25 65 240 45.534012 + CGATAAGCTTTAATGCGGTAGTTTA----TCACAGTTAAATTGCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 1589 1629 257 55.616699 + CAACATGAATGGTCTTCGGTTTCCG----TGTTTCGTAAAGTCTG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2274 2314 242 46.720200 + CAGATTGTACTGAGAGTGCACCATA----TGCGGTGTGAAATACC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2296 2340 245 48.499512 + ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2931 2972 272 64.513199 + ACAGAGTTCTTGAAGTGGTGGCCTA---ACTACGGCTACACTAGA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3207 3246 249 50.871902 + AAAAGGATCTTCACCTAGATCCTTT-----TAAATTAAAAATGAA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3233 3274 240 45.534012 + AAATTAAAAATGAAGTTTTAAATCA---ATCTAAAGTATATATGA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3240 3284 253 53.244308 + AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3350 3391 251 52.058105 + CATAGTTGCCTGACTCCCCGTCGTG---TAGATAACTACGATACG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3788 3828 254 53.837402 + ACTGCATAATTCTCTTACTGTCATG----CCATCCGTAAGATGCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3796 3836 241 46.127106 + ATTCTCTTACTGTCATGCCATCCGT----AAGATGCTTTTCTGTG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4133 4173 258 56.209808 + ACGGAAATGTTGAATACTCATACTC----TTCCTTTTTCAATATT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4166 4207 253 53.244308 + TCAATATTATTGAAGCATTTATCAG---GGTTATTGTCTCATGAG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4187 4227 251 52.058105 + TCAGGGTTATTGTCTCATGAGCGGA----TACATATTTGAATGTA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4273 4312 259 56.802902 + AAGTGCCACCTGACGTCTAAGAAAC-----CATTATTATCATGAC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4291 4331 244 47.906403 + AAGAAACCATTATTATCATGACATT----AACCTATAAAAATAGG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4299 4342 244 47.906403 + ATTATTATCATGACATTAACCTATA-AAAATAGGCGTATCACGAG
2: $PFSEARCHV3 -n -t 1 -f -b -o 7 ./ecp.prf $TMPDIR/CVPBR322.fa # FASTA to TSV
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 1 41 271 63.920105 + TTCTCATGTTTGACAGCTTATCATC----GATAAGCTTTAATGCG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 25 65 240 45.534012 + CGATAAGCTTTAATGCGGTAGTTTA----TCACAGTTAAATTGCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 1589 1629 257 55.616699 + CAACATGAATGGTCTTCGGTTTCCG----TGTTTCGTAAAGTCTG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2274 2314 242 46.720200 + CAGATTGTACTGAGAGTGCACCATA----TGCGGTGTGAAATACC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2296 2340 245 48.499512 + ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2931 2972 272 64.513199 + ACAGAGTTCTTGAAGTGGTGGCCTA---ACTACGGCTACACTAGA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3207 3246 249 50.871902 + AAAAGGATCTTCACCTAGATCCTTT-----TAAATTAAAAATGAA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3233 3274 240 45.534012 + AAATTAAAAATGAAGTTTTAAATCA---ATCTAAAGTATATATGA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3240 3284 253 53.244308 + AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3350 3391 251 52.058105 + CATAGTTGCCTGACTCCCCGTCGTG---TAGATAACTACGATACG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3788 3828 254 53.837402 + ACTGCATAATTCTCTTACTGTCATG----CCATCCGTAAGATGCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3796 3836 241 46.127106 + ATTCTCTTACTGTCATGCCATCCGT----AAGATGCTTTTCTGTG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4133 4173 258 56.209808 + ACGGAAATGTTGAATACTCATACTC----TTCCTTTTTCAATATT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4166 4207 253 53.244308 + TCAATATTATTGAAGCATTTATCAG---GGTTATTGTCTCATGAG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4187 4227 251 52.058105 + TCAGGGTTATTGTCTCATGAGCGGA----TACATATTTGAATGTA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4273 4312 259 56.802902 + AAGTGCCACCTGACGTCTAAGAAAC-----CATTATTATCATGAC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4291 4331 244 47.906403 + AAGAAACCATTATTATCATGACATT----AACCTATAAAAATAGG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4299 4342 244 47.906403 + ATTATTATCATGACATTAACCTATA-AAAATAGGCGTATCACGAG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4348 4308 248 50.278809 - AAGGGCCTCGTGATACGCCTATTTT----TATAGGTTAATGTCAT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4336 4296 244 47.906403 - ATACGCCTATTTTTATAGGTTAATG----TCATGATAATAATGGT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4323 4283 248 50.278809 - TATAGGTTAATGTCATGATAATAAT----GGTTTCTTAGACGTCA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4232 4192 252 52.651199 - CTAAATACATTCAAATATGTATCCG----CTCATGAGACAATAAC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 4178 4135 249 50.871902 - TCAATAATATTGAAAAAGGAAGAGT-ATGAGTATTCAACATTTCC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3954 3913 241 46.127106 - TGAGCACTTTTAAAGTTCTGCTATG---TGGCGCGGTATTATCCC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3861 3821 242 46.720200 - ATGACTTGGTTGAGTACTCACCAGT----CACAGAAAAGCATCTT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3569 3529 240 45.534012 - ACTACTTACTCTAGCTTCCCGGCAA----CAATTAATAGACTGGA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3464 3420 243 47.313309 - TGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGC
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3301 3261 255 54.430511 - CATTGGTAACTGTCAGACCAAGTTT----ACTCATATATACTTTA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3273 3232 250 51.465012 - CATATATACTTTAGATTGATTTAAA---ACTTCATTTTTAATTTA
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3267 3225 240 45.534012 - TACTTTAGATTGATTTAAAACTTCA--TTTTTAATTTAAAAGGAT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3250 3210 241 46.127106 - AAACTTCATTTTTAATTTAAAAGGA----TCTAGGTGAAGATCCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3216 3173 253 53.244308 - AGATCCTTTTTGATAATCTCATGAC-CAAAATCCCTTAACGTGAG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 3131 3091 265 60.361511 - AGGATCTTCTTGAGATCCTTTTTTT----CTGCGCGTAATCTGCT
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 2318 2274 243 47.313309 - GTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTG
2: NS00001|ECOLI_PROM_RP70 1 -1 CVPBR322 85 41 262 58.582199 - ACACGGTGCCTGACTGCGTTAGCAATTTAACTGTGATAAACTACC
2:
2: $PFSEARCHV3 -n -t 1 -f -o 8 ./ecp.prf $TMPDIR/CVPBR322.fa # FASTA to SAM
2: @HD VN:1.6 SO:coordinate
2: @SQ SN:NS00001|ECOLI_PROM_RP70 LN:45 DS:E. coli RNA POL sigma-70 promoter.
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 TTCTCATGTTTGACAGCTTATCATCGATAAGCTTTAATGCG * AS:i:271 NS:f:63.92
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CGATAAGCTTTAATGCGGTAGTTTATCACAGTTAAATTGCT * AS:i:240 NS:f:45.53
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CAACATGAATGGTCTTCGGTTTCCGTGTTTCGTAAAGTCTG * AS:i:257 NS:f:55.62
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACC * AS:i:242 NS:f:46.72
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC * AS:i:245 NS:f:48.50
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 ACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGA * AS:i:272 NS:f:64.51
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M5D15M * 0 45 AAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAA * AS:i:249 NS:f:50.87
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 AAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGA * AS:i:240 NS:f:45.53
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG * AS:i:253 NS:f:53.24
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 CATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACG * AS:i:251 NS:f:52.06
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCT * AS:i:254 NS:f:53.84
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTG * AS:i:241 NS:f:46.13
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAATATT * AS:i:258 NS:f:56.21
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 TCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAG * AS:i:253 NS:f:53.24
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 TCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTA * AS:i:251 NS:f:52.06
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M5D15M * 0 45 AAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGAC * AS:i:259 NS:f:56.80
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 AAGAAACCATTATTATCATGACATTAACCTATAAAAATAGG * AS:i:244 NS:f:47.91
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M1D19M * 0 45 ATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAG * AS:i:244 NS:f:47.91
2: $PFSEARCHV3 -n -t 1 -f -b -o 8 ./ecp.prf $TMPDIR/CVPBR322.fa # FASTA to SAM
2: @HD VN:1.6 SO:coordinate
2: @SQ SN:NS00001|ECOLI_PROM_RP70 LN:45 DS:E. coli RNA POL sigma-70 promoter.
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 TTCTCATGTTTGACAGCTTATCATCGATAAGCTTTAATGCG * AS:i:271 NS:f:63.92
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CGATAAGCTTTAATGCGGTAGTTTATCACAGTTAAATTGCT * AS:i:240 NS:f:45.53
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CAACATGAATGGTCTTCGGTTTCCGTGTTTCGTAAAGTCTG * AS:i:257 NS:f:55.62
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACC * AS:i:242 NS:f:46.72
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 ATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACC * AS:i:245 NS:f:48.50
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 ACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGA * AS:i:272 NS:f:64.51
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M5D15M * 0 45 AAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAA * AS:i:249 NS:f:50.87
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 AAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGA * AS:i:240 NS:f:45.53
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 AAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGG * AS:i:253 NS:f:53.24
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 CATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACG * AS:i:251 NS:f:52.06
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCT * AS:i:254 NS:f:53.84
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTG * AS:i:241 NS:f:46.13
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAATATT * AS:i:258 NS:f:56.21
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 TCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAG * AS:i:253 NS:f:53.24
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 TCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTA * AS:i:251 NS:f:52.06
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M5D15M * 0 45 AAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGAC * AS:i:259 NS:f:56.80
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 AAGAAACCATTATTATCATGACATTAACCTATAAAAATAGG * AS:i:244 NS:f:47.91
2: CVPBR322 2 NS00001|ECOLI_PROM_RP70 1 255 25M1D19M * 0 45 ATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAG * AS:i:244 NS:f:47.91
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 AAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAT * AS:i:248 NS:f:50.28
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGT * AS:i:244 NS:f:47.91
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 TATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCA * AS:i:248 NS:f:50.28
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CTAAATACATTCAAATATGTATCCGCTCATGAGACAATAAC * AS:i:252 NS:f:52.65
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M1D19M * 0 45 TCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCC * AS:i:249 NS:f:50.87
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 TGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCC * AS:i:241 NS:f:46.13
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT * AS:i:242 NS:f:46.72
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 ACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGA * AS:i:240 NS:f:45.53
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 TGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGC * AS:i:243 NS:f:47.31
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 CATTGGTAACTGTCAGACCAAGTTTACTCATATATACTTTA * AS:i:255 NS:f:54.43
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M3D17M * 0 45 CATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTA * AS:i:250 NS:f:51.47
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M2D18M * 0 45 TACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGAT * AS:i:240 NS:f:45.53
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 AAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCT * AS:i:241 NS:f:46.13
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M1D19M * 0 45 AGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAG * AS:i:253 NS:f:53.24
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 25M4D16M * 0 45 AGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCT * AS:i:265 NS:f:60.36
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 GTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTG * AS:i:243 NS:f:47.31
2: CVPBR322 18 NS00001|ECOLI_PROM_RP70 1 255 45M * 0 45 ACACGGTGCCTGACTGCGTTAGCAATTTAACTGTGATAAACTACC * AS:i:262 NS:f:58.58
2:
2: $PFSEARCHV3 -n -t 1 -q -o 7 ./hiv.prf ./hiv.fastq # FASTQ to TSV
2: NOTANAC|HIV 314 -1292 VBT43:00033:00068 1 75 3020 30.199999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1618 VBT43:00042:00214 51 113 3064 30.639999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 271 -1331 VBT43:00046:00240 2 81 3993 39.930000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 251 -1395 VBT43:00018:00254 1 36 1717 17.170000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGACTTCTGTGAAGTTCAATTAGGAATACCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 887 -670 VBT43:00021:00272 1 125 5507 55.070000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 770 -783 VBT43:00035:00274 1 128 5534 55.340000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAG-GGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 655 -918 VBT43:00037:00292 1 108 4795 47.950001 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 910 -653 VBT43:00014:00314 1 119 5494 54.939999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 74 -1554 VBT43:00017:00332 1 54 2678 26.779999 + -------------------------------------------------------------------------CATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 869 -674 VBT43:00039:00346 1 137 5161 51.610001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGA-AACAGGGAGATTCTAA-AGAACCAGTACATGGAGCGTATTATGACCCCTCAGAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 838 -719 VBT43:00045:00317 1 125 5665 56.649998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 703 -909 VBT43:00027:00364 1 70 3464 34.639999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 368 -1183 VBT43:00042:00499 1 131 6671 66.709999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1619 VBT43:00017:00696 106 167 3013 30.129999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 522 -1055 VBT43:00023:00665 2 104 4242 42.419998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTAAGAGAACATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 626 -968 VBT43:00029:00750 1 88 3930 39.299999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 865 -657 VBT43:00037:00780 1 156 5588 55.879997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGA-AACAGGGAGATTCTAA-AGAACCAGTACATGGAGCGTATTATGACCCAC--AAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 240 -1308 VBT43:00027:00977 1 133 5564 55.639999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTATTAGATGTAGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 19 -1546 VBT43:00047:00970 2 118 5832 58.320000 + ------------------ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 528 -1063 VBT43:00011:01001 1 91 4315 43.149998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 513 -983 VBT43:00048:01010 1 186 8496 84.959999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCGCTGGATGGGTTATGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 965 -534 VBT43:00036:01093 1 182 8079 80.790001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAGACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAA-ACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1630 VBT43:00048:01143 80 130 2472 24.719999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 397 -1182 VBT43:00008:01197 1 103 5329 53.289997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 40 -1544 VBT43:00046:01178 1 98 4910 49.099998 + ---------------------------------------CCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 685 -915 VBT43:00022:01216 5 85 3644 36.439999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00017:01288 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 350 -1183 VBT43:00025:01284 1 149 7271 72.709999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 854 -719 VBT43:00041:01311 1 110 4576 45.759998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGaTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 645 -935 VBT43:00049:01371 4 105 4800 48.000000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 723 -832 VBT43:00023:01679 1 127 5767 57.669998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTATACAGCTACCAGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 358 -1233 VBT43:00024:01846 2 92 4443 44.430000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1630 -1 VBT43:00025:01897 1 51 2235 22.350000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGCACTA
2: NOTANAC|HIV 1 -1561 VBT43:00034:01890 65 183 5429 54.289997 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA-AAAATAAAAGCATTAGTAGAAATTTGTACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 577 -1052 VBT43:00027:01904 1 53 2600 26.000000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 391 -1183 VBT43:00037:01920 1 108 5588 55.879997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 392 -1151 VBT43:00048:01921 1 139 6908 69.080002 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00035:01950 1 52 2395 23.949999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 231 -1391 VBT43:00061:00027 1 60 3030 30.299999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 34 -1556 VBT43:00060:00064 1 92 4525 45.250000 + ---------------------------------TTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 81 -1533 VBT43:00085:00090 1 68 3215 32.149998 + --------------------------------------------------------------------------------AGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 321 -1215 VBT43:00060:00142 1 146 6851 68.510002 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 494 -1078 VBT43:00062:00112 1 110 5263 52.629997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 163 -1370 VBT43:00063:00101 2 156 6462 64.619995 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 678 -911 VBT43:00063:00107 1 93 4386 43.860001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00071:00106 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 886 -665 VBT43:00072:00113 1 131 5827 58.270000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1162 VBT43:00072:00198 1 220 10747 107.470001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 585 -978 VBT43:00081:00153 1 119 5303 53.029999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1016 -530 VBT43:00085:00151 1 136 6450 64.500000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1637 VBT43:00098:00159 77 120 2100 21.000000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 56 -1485 VBT43:00056:00208 1 139 5858 58.579998 + -------------------------------------------------------CAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAAGATTTCAAAAATTGGGCCTGA-AACCCATACAATACTCCAGTATTTGTCATAAAGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 207 -1396 VBT43:00057:00227 1 79 3902 39.020000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 39 -1396 VBT43:00058:00219 1 254 10608 106.079994 + --------------------------------------GCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGaACTTCTAGGAAGTTCAATTAGGAATACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 473 -1048 VBT43:00058:00220 1 161 7408 74.080002 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATATTCCAAAGTAACATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAATTATTTATCAATACGTGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAGCATCTGTTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 662 -932 VBT43:00067:00200 1 88 3964 39.639999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGCCTATAGAGCTGCCAGATAAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1583 VBT43:00076:00240 93 190 4875 48.750000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 662 -900 VBT43:00088:00234 1 120 5784 57.840000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 404 -1195 VBT43:00090:00226 1 83 4273 42.730000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 576 -934 VBT43:00094:00222 1 172 8001 80.009995 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 188 -1391 VBT43:00098:00230 1 109 4227 42.270000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 105 -1412 VBT43:00050:00287 1 164 7305 73.049995 + --------------------------------------------------------------------------------------------------------AGAAATTTGTACAGAAATGGA-AAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 10 -1558 VBT43:00051:00295 1 114 5349 53.489998 + ---------CCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAGTAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 186 -1433 VBT43:00053:00282 2 70 2192 21.920000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAGAAAAAGGAAAGTAgtagtgGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1581 VBT43:00056:00270 34 133 4978 49.779999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 387 -1226 VBT43:00061:00257 1 69 3511 35.110001 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 82 -1371 VBT43:00068:00271 1 235 9699 96.989998 + ---------------------------------------------------------------------------------GAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 770 -766 VBT43:00086:00286 1 146 6605 66.049995 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00063:00330 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 1648 -1 VBT43:00092:00308 1 33 1499 14.990000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 576 -965 VBT43:00073:00350 1 141 6547 65.470001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 15 -1546 VBT43:00077:00483 1 121 5832 58.320000 + --------------TGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 393 -1132 VBT43:00078:00474 1 157 7690 76.900002 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 622 -865 VBT43:00055:00547 1 192 7838 78.379997 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-TGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-AAATTAAATTGGGCAAGTCAGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 430 -1167 VBT43:00060:00510 1 85 4183 41.829998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGGGCCTTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00092:00531 1 52 2417 24.170000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 421 -1182 VBT43:00072:00550 1 79 4090 40.899998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 832 -758 VBT43:00059:00623 1 92 4014 40.139999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAGCTGGCAGAAAACAGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00081:00626 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 1009 -631 VBT43:00084:00619 1 42 2067 20.670000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 840 -719 VBT43:00085:00660 1 123 5660 56.599998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 265 -1337 VBT43:00090:00698 2 81 3746 37.459999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 405 -1132 VBT43:00077:00700 1 145 6934 69.339996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 590 -976 VBT43:00083:00736 1 116 4913 49.129997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 455 -1085 VBT43:00074:00791 1 142 6767 67.669998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGATATAATTATTTATCAATACGTGGATGATTTGTATGTAGAATCTGACTTAGAAATAGGGCAGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 343 -1125 VBT43:00092:00779 1 214 10077 100.769997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 839 -666 VBT43:00067:00804 1 177 7863 78.629997 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 739 -874 VBT43:00092:00888 1 69 3468 34.680000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 497 -1056 VBT43:00067:00937 1 129 6129 61.289997 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1631 -1 VBT43:00077:00922 1 50 2407 24.070000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 911 -684 VBT43:00086:00913 1 87 3995 39.950001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 978 -591 VBT43:00095:00911 1 113 5166 51.660000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGAAGTACAGAAGCAGGAGCGAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 168 -1444 VBT43:00055:01032 1 70 3058 30.580000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1386 VBT43:00056:01041 4 110 4415 44.149998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTCCAATTAGGAATACCACATCCCGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 362 -1182 VBT43:00098:01003 2 139 6779 67.790001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 305 -1184 VBT43:00056:01063 1 192 9036 90.360001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 517 -1023 VBT43:00083:01091 1 142 6601 66.010002 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 554 -992 VBT43:00073:01128 1 135 5891 58.910000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 954 -524 VBT43:00084:01101 1 202 8497 84.970001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAA-TATGCAA-AATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 243 -1335 VBT43:00086:01119 1 104 4844 48.439999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1645 -1 VBT43:00087:01101 1 36 1659 16.590000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 1 -1630 VBT43:00093:01114 10 60 2472 24.719999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 390 -1136 VBT43:00071:01154 1 155 6954 69.540001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1638 VBT43:00098:01157 47 89 2047 20.469999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 706 -762 VBT43:00077:01225 1 214 9984 99.839996 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 909 -639 VBT43:00069:01271 1 132 5545 55.449997 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATAGAGCGTATTATGACCCAC--AAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1555 VBT43:00076:01276 55 180 5927 59.270000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATGAAAGCATTAGTAGAAATTTGTACAGAAATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1544 VBT43:00083:01281 43 178 6253 62.529999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 3 -1533 VBT43:00075:01347 1 146 7206 72.059998 + --CATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 851 -696 VBT43:00081:01302 1 135 6103 61.029999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 43 -1491 VBT43:00085:01305 1 149 6647 66.470001 + ------------------------------------------GGAATGGGTGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTaGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 61 -1576 VBT43:00078:01350 1 45 2221 22.209999 + ------------------------------------------------------------GTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 251 -1275 VBT43:00080:01356 1 156 7444 74.439995 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 494 -1108 VBT43:00086:01351 1 81 3280 32.799999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATCTTAGAGCCTTTTaAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1251 VBT43:00096:01363 1 131 6284 62.840000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 273 -1191 VBT43:00087:01578 1 217 10191 101.909996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1164 VBT43:00059:01626 1 217 10118 101.180000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT-TTAGAACCTTTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 558 -1050 VBT43:00078:01624 1 74 3672 36.719997 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 232 -1272 VBT43:00095:01600 1 178 7486 74.860001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGaCATTTACCATACCTAGTATAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00053:01704 1 52 2386 23.859999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 438 -1183 VBT43:00083:01743 1 61 3112 31.119999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTGCTTCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 202 -1403 VBT43:00061:01797 10 86 3678 36.779999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 419 -1051 VBT43:00089:01765 1 210 9450 94.500000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACATCTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 396 -1245 VBT43:00065:01835 1 41 2094 20.939999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1598 VBT43:00080:01832 46 128 4011 40.110001 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 470 -1057 VBT43:00081:01825 1 154 6854 68.540001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1497 VBT43:00052:01852 7 190 8956 89.559998 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 883 -768 VBT43:00054:01870 1 31 1308 13.080000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAGAGAAGCAGAACTAGAACTGGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1040 -526 VBT43:00059:01889 1 116 5478 54.779999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1630 -1 VBT43:00061:01851 1 51 2333 23.330000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 43 -1539 VBT43:00076:01869 1 100 4879 48.789997 + ------------------------------------------GGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 726 -899 VBT43:00076:01886 1 57 2805 28.049999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 238 -1321 VBT43:00081:01896 1 122 5361 53.610001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-TCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 478 -1022 VBT43:00055:01942 1 182 8367 83.669998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 339 -1153 VBT43:00063:01947 1 190 9120 91.199997 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 625 -889 VBT43:00078:01905 1 168 7631 76.309998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGATAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 382 -1058 VBT43:00085:01949 1 240 10982 109.820000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 626 -896 VBT43:00095:01931 1 160 7127 71.269997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 173 -1377 VBT43:00098:01928 1 138 5357 53.570000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 599 -971 VBT43:00053:01968 1 112 5093 50.930000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 19 -1554 VBT43:00066:01963 2 109 4990 49.899998 + ------------------ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA-AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 272 -1260 VBT43:00081:01994 1 149 6684 66.839996 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 858 -771 VBT43:00051:02023 1 53 2353 23.529999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1529 VBT43:00066:02013 68 216 6162 61.619999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAA-ATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGG--AAGGAAAATTTCAAAAATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 891 -660 VBT43:00075:02041 3 133 6019 60.189999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 445 -1047 VBT43:00080:02033 1 188 8045 80.449997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCACAGGGATGGAGAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACATCTATTGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 346 -1178 VBT43:00084:02011 7 164 7372 73.720001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGAACAAAATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 618 -899 VBT43:00086:02038 1 164 7136 71.360001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTTAATGACATACAGAAGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 403 -1191 VBT43:00075:02096 1 88 4533 45.329998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 449 -1078 VBT43:00077:02099 1 154 6981 69.809998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 11 -1598 VBT43:00097:02073 1 73 3656 36.559998 + ----------CTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 685 -911 VBT43:00099:02118 5 89 3681 36.809998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 102 -1473 VBT43:00109:00068 1 106 4154 41.540001 + -----------------------------------------------------------------------------------------------------AGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA-AAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00111:00062 1 53 1847 18.469999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAATGAACAAGTAGATaAAATTAGTCAGTACTAGAATCAGGAGAGTACTA
2: NOTANAC|HIV 189 -1359 VBT43:00119:00068 5 137 5159 51.590000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGA-TTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCGGGGCTAAAAAAGAAAAAATCAGTAACAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 745 -807 VBT43:00122:00075 1 130 6032 60.320000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 20 -1483 VBT43:00128:00076 1 179 8650 86.500000 + -------------------CTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 136 -1400 VBT43:00133:00059 1 152 6228 62.279999 + ---------------------------------------------------------------------------------------------------------------------------------------AAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAAGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 359 -1197 VBT43:00134:00059 1 126 6005 60.049999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACGATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 598 -978 VBT43:00141:00144 1 106 4754 47.539997 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 468 -1009 VBT43:00104:00161 1 205 9783 97.829994 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGAGAACATCTGTTGAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1628 -9 VBT43:00106:00182 1 45 2175 21.750000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGA--------
2: NOTANAC|HIV 1009 -531 VBT43:00113:00153 1 141 6331 63.309998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCC-CACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 564 -1002 VBT43:00116:00189 1 116 5544 55.439999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 283 -1266 VBT43:00118:00165 1 132 5782 57.820000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 902 -571 VBT43:00134:00239 1 209 9792 97.919998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1642 VBT43:00138:00245 43 81 1832 18.320000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1622 VBT43:00142:00224 27 85 2890 28.900000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 272 -1258 VBT43:00105:00289 1 153 6586 65.860001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGaCATTTACCATACCTAGTATAAACAATGAGACACCAGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 143 -1368 VBT43:00108:00260 1 178 7081 70.809998 + ----------------------------------------------------------------------------------------------------------------------------------------------CAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGaCAGGGCTAAAAAAGAAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 306 -1190 VBT43:00114:00297 1 187 8695 86.949997 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAATCAGTAACAGTACTGGATGTGGGAGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACaAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 632 -897 VBT43:00120:00290 1 153 7196 71.959999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 658 -909 VBT43:00142:00289 1 114 5065 50.649998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 380 -1113 VBT43:00145:00269 1 189 9057 90.570000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATATGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 212 -1301 VBT43:00116:00302 1 169 8149 81.489998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 940 -614 VBT43:00117:00317 1 128 5873 58.730000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 449 -1022 VBT43:00111:00367 1 210 9373 93.729996 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATCTAC-ACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1627 VBT43:00111:00544 31 84 2497 24.969999 + CCCATTAGTCCTACTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 432 -1100 VBT43:00117:00523 1 150 7229 72.290001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 744 -841 VBT43:00124:00503 1 96 4215 42.149998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-AAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 437 -1220 VBT43:00124:00512 1 25 1318 13.179999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATGTGCTTCCACAGGGATGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 81 -1440 VBT43:00106:00591 1 167 6743 67.430000 + --------------------------------------------------------------------------------AGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCCGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1628 -1 VBT43:00133:00591 1 53 2568 25.680000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 332 -1275 VBT43:00141:00563 1 75 3399 33.989998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 16 -1510 VBT43:00103:00637 1 156 7550 75.500000 + ---------------GACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 431 -1083 VBT43:00109:00642 1 168 8292 82.919998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 661 -906 VBT43:00129:00602 1 114 4917 49.169998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATACAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1633 -1 VBT43:00137:00609 1 48 2229 22.289999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAACAAGTAGATAAATTAGTCAGTGCTGAAATCAGAAAAGTACTA
2: NOTANAC|HIV 84 -1483 VBT43:00108:00663 1 114 4951 49.509998 + -----------------------------------------------------------------------------------AGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 323 -1186 VBT43:00108:00668 1 173 8471 84.709999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 28 -1473 VBT43:00135:00688 1 181 8375 83.750000 + ---------------------------GTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00136:00687 1 52 2417 24.170000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 789 -801 VBT43:00141:00654 1 92 4215 42.149998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 638 -978 VBT43:00133:00701 2 67 2756 27.559999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1568 VBT43:00125:00766 11 123 5541 55.410000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 141 -1400 VBT43:00131:00771 1 147 6090 60.899998 + --------------------------------------------------------------------------------------------------------------------------------------------TTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1635 -1 VBT43:00143:00796 1 46 2192 21.920000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 863 -635 VBT43:00147:00794 1 184 8364 83.639999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 851 -696 VBT43:00149:00791 1 135 6103 61.029999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 912 -625 VBT43:00105:00812 1 145 6448 64.479996 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGGCTTAATAGCAGAAGTACAGGAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 286 -1199 VBT43:00129:00845 1 197 9260 92.599998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 382 -1126 VBT43:00105:00860 1 174 8544 85.439995 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 497 -1071 VBT43:00108:00862 1 114 5466 54.660000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1554 VBT43:00122:00854 6 132 6225 62.250000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 832 -758 VBT43:00128:00870 1 92 4190 41.899998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 496 -968 VBT43:00145:00853 1 218 9965 99.650002 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 309 -1183 VBT43:00101:00937 1 190 9358 93.579994 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 741 -756 VBT43:00104:00911 1 185 8466 84.659996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 537 -978 VBT43:00110:00920 1 167 7614 76.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1610 VBT43:00114:00936 132 202 3492 34.919998 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 715 -879 VBT43:00126:00917 1 88 4310 43.099998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 156 -1370 VBT43:00129:00942 1 162 6607 66.070000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTagtggcAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 481 -1152 VBT43:00134:00937 1 48 1774 17.740000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGTAGCATGACAAAAATCTTAGAGCC-TTTAAAAAACGAAATCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1344 VBT43:00141:00902 1 155 6435 64.349998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: $PFSEARCHV3 -n -t 1 -q -b -o 7 ./hiv.prf ./hiv.fastq # FASTQ to TSV
2: NOTANAC|HIV 314 -1292 VBT43:00033:00068 1 75 3020 30.199999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 571 -989 VBT43:00028:00207 1 121 4906 49.059998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACTTAGAAATAGGGCAGCATAGAACAAAATAAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGATGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 166 -1378 VBT43:00030:00229 1 143 5325 53.250000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAATACTCCAGTATTTGTCATAAAGAAAAGGAAagtagTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1618 VBT43:00042:00214 51 113 3064 30.639999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 271 -1331 VBT43:00046:00240 2 81 3993 39.930000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 614 -1029 VBT43:00016:00266 1 39 1620 16.199999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 251 -1395 VBT43:00018:00254 1 36 1717 17.170000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGACTTCTGTGAAGTTCAATTAGGAATACCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 887 -670 VBT43:00021:00272 1 125 5507 55.070000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 937 -684 VBT43:00023:00299 1 61 2717 27.170000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 939 -697 VBT43:00030:00270 1 46 2049 20.490000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 308 -1223 VBT43:00031:00270 3 151 6187 61.869999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATCAGTAACAGTACTGGATGTAGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATT-ACCATACCTAGTATAAACAATGCGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 770 -783 VBT43:00035:00274 1 128 5534 55.340000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAG-GGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 154 -1484 VBT43:00036:00253 1 44 2041 20.410000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------CCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 655 -918 VBT43:00037:00292 1 108 4795 47.950001 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1576 VBT43:00045:00293 52 155 4690 46.899998 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCA-TGACAGAAGAAAAAATAAAAGCATTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 910 -653 VBT43:00014:00314 1 119 5494 54.939999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 511 -1135 VBT43:00017:00303 1 36 1459 14.589999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAAACGAAATCCAGACATAGTTATTTATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 74 -1554 VBT43:00017:00332 1 54 2678 26.779999 + -------------------------------------------------------------------------CATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 133 -1521 VBT43:00019:00303 1 28 1468 14.679999 - ------------------------------------------------------------------------------------------------------------------------------------GGAAAAATTTCAAAAATTGGGCCTGAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 806 -812 VBT43:00034:00335 1 62 1946 19.459999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTTATCCAGGGATTAAGGTAAA-CAATTATGTAGACTCATTAG-GGAACCAAAGCACTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 869 -674 VBT43:00039:00346 1 137 5161 51.610001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGA-AACAGGGAGATTCTAA-AGAACCAGTACATGGAGCGTATTATGACCCCTCAGAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 838 -719 VBT43:00045:00317 1 125 5665 56.649998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 703 -909 VBT43:00027:00364 1 70 3464 34.639999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 537 -1107 VBT43:00044:00376 1 38 1873 18.730000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATCAATACATGGATGATTTGTATGTAGGATCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 368 -1183 VBT43:00042:00499 1 131 6671 66.709999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 779 -810 VBT43:00034:00547 1 93 4279 42.790001 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 415 -1159 VBT43:00019:00608 3 110 5181 51.809998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 815 -764 VBT43:00024:00623 1 103 4501 45.009998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1595 VBT43:00034:00614 96 180 3673 36.730000 - CCCATTAGTCCTATTGATACTGTACCAGTAA-ATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1642 VBT43:00006:00669 49 87 1832 18.320000 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1619 VBT43:00017:00696 106 167 3013 30.129999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 522 -1055 VBT43:00023:00665 2 104 4242 42.419998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTAAGAGAACATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 54 -1530 VBT43:00042:00659 1 98 4765 47.649998 - -----------------------------------------------------CCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 416 -1164 VBT43:00030:00704 1 101 4650 46.500000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAGGGAT-AGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1065 -526 VBT43:00046:00719 1 91 4193 41.930000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAGGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 626 -968 VBT43:00029:00750 1 88 3930 39.299999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 160 -1425 VBT43:00034:00758 1 103 3694 36.939999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 84 -1548 VBT43:00036:00778 11 60 2072 20.719999 - -----------------------------------------------------------------------------------AGAAGAAAATAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 865 -657 VBT43:00037:00780 1 156 5588 55.879997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGA-AACAGGGAGATTCTAA-AGAACCAGTACATGGAGCGTATTATGACCCAC--AAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 528 -1072 VBT43:00042:00758 1 82 4093 40.930000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 599 -1003 VBT43:00026:00990 1 80 3687 36.869999 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 240 -1308 VBT43:00027:00977 1 133 5564 55.639999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTATTAGATGTAGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 931 -719 VBT43:00030:00977 1 32 1517 15.170000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAACCAGTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 19 -1546 VBT43:00047:00970 2 118 5832 58.320000 + ------------------ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 528 -1063 VBT43:00011:01001 1 91 4315 43.149998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 726 -793 VBT43:00030:01017 1 163 7772 77.720001 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTATAGAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1112 -526 VBT43:00041:01043 1 44 1997 19.969999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 324 -1182 VBT43:00045:01043 1 175 8138 81.379997 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 609 -980 VBT43:00046:01020 1 93 4090 40.899998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 513 -983 VBT43:00048:01010 1 186 8496 84.959999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCGCTGGATGGGTTATGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 720 -819 VBT43:00029:01090 1 143 6773 67.729996 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 965 -534 VBT43:00036:01093 1 182 8079 80.790001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAGACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAA-ACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 438 -1196 VBT43:00006:01126 1 47 2004 20.039999 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTGCTTCCACAGGGATGGAA-GGATCACCAGCAATATTCCAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1558 VBT43:00012:01124 34 155 5578 55.779999 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCA-TGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1630 VBT43:00048:01143 80 130 2472 24.719999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 397 -1182 VBT43:00008:01197 1 103 5329 53.289997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 645 -973 VBT43:00013:01159 1 63 2464 24.639999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 322 -1259 VBT43:00038:01160 1 101 4752 47.520000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 40 -1544 VBT43:00046:01178 1 98 4910 49.099998 + ---------------------------------------CCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 163 -1351 VBT43:00046:01188 2 172 6169 61.689999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACAATACTCCAGTATTTGTCATAAAGAAAAGGAAagtagTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAAAG--AAAAATCAGTAACAGTACTGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 685 -915 VBT43:00022:01216 5 85 3644 36.439999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00017:01288 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 350 -1183 VBT43:00025:01284 1 149 7271 72.709999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 648 -941 VBT43:00045:01253 1 92 3850 38.500000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACCCCATCCTGATAAATGGACAGTACAG-CTATACAGCTGCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 167 -1448 VBT43:00033:01305 1 72 2363 23.629999 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATACTCCAGTATTTGTCATAAAGAAAAAGGAagtagTAGTGGTAAATGGAGAAAATTAGTAGATTTCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 854 -719 VBT43:00041:01311 1 110 4576 45.759998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGaTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 432 -1181 VBT43:00044:01350 1 69 3604 36.040001 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 645 -935 VBT43:00049:01371 4 105 4800 48.000000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1579 VBT43:00026:01484 26 126 4593 45.930000 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCA-TGACAGAAGAGAAAATAAAAGCATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 426 -1157 VBT43:00030:01601 8 106 4817 48.169998 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAGAACGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 723 -832 VBT43:00023:01679 1 127 5767 57.669998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCCTATACAGCTACCAGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 358 -1233 VBT43:00024:01846 2 92 4443 44.430000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 421 -1198 VBT43:00045:01828 1 63 3264 32.639999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1630 -1 VBT43:00025:01897 1 51 2235 22.350000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGCACTA
2: NOTANAC|HIV 1 -1561 VBT43:00034:01890 65 183 5429 54.289997 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA-AAAATAAAAGCATTAGTAGAAATTTGTACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 590 -999 VBT43:00040:01875 1 91 2959 29.590000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAGAACAAAA-TAGAGGAACTGAGACAGCATCTGTTAAGGTGGGGATTTGACACACCAGACAA-AAACATCAGAAAGAGCTCCCATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 577 -1052 VBT43:00027:01904 1 53 2600 26.000000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 391 -1183 VBT43:00037:01920 1 108 5588 55.879997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 392 -1151 VBT43:00048:01921 1 139 6908 69.080002 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00035:01950 1 52 2395 23.949999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 231 -1391 VBT43:00061:00027 1 60 3030 30.299999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 34 -1556 VBT43:00060:00064 1 92 4525 45.250000 + ---------------------------------TTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 936 -656 VBT43:00085:00072 1 90 4043 40.430000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 81 -1533 VBT43:00085:00090 1 68 3215 32.149998 + --------------------------------------------------------------------------------AGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 321 -1215 VBT43:00060:00142 1 146 6851 68.510002 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 494 -1078 VBT43:00062:00112 1 110 5263 52.629997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 163 -1370 VBT43:00063:00101 2 156 6462 64.619995 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 678 -911 VBT43:00063:00107 1 93 4386 43.860001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 617 -1009 VBT43:00064:00120 1 56 2529 25.289999 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00071:00106 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 886 -665 VBT43:00072:00113 1 131 5827 58.270000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 250 -1328 VBT43:00074:00114 1 102 4356 43.559998 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 692 -802 VBT43:00076:00115 2 189 8560 85.599998 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAAGGGAACCAAAGCACTAACAGAAGTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 222 -1251 VBT43:00088:00140 1 206 8944 89.439995 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 583 -1015 VBT43:00095:00116 1 84 3891 38.910000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 88 -1490 VBT43:00098:00128 2 105 5029 50.289997 - ---------------------------------------------------------------------------------------AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 88 -1504 VBT43:00058:00178 1 90 4452 44.520000 - ---------------------------------------------------------------------------------------AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 45 -1515 VBT43:00064:00186 1 122 5698 56.980000 - --------------------------------------------AATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 239 -1268 VBT43:00067:00180 1 175 8223 82.229996 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGAGAACTCAAGACTTTTGGGAAGTTCAATTAGGAATACCACATCCTGCAGGGATAAAAAAGAACAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 464 -1116 VBT43:00071:00162 1 102 4708 47.079998 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1162 VBT43:00072:00198 1 220 10747 107.470001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 426 -1159 VBT43:00074:00153 7 103 4602 46.020000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 585 -978 VBT43:00081:00153 1 119 5303 53.029999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1016 -530 VBT43:00085:00151 1 136 6450 64.500000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1637 VBT43:00098:00159 77 120 2100 21.000000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 755 -840 VBT43:00098:00169 1 87 4245 42.450001 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 56 -1485 VBT43:00056:00208 1 139 5858 58.579998 + -------------------------------------------------------CAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAAGATTTCAAAAATTGGGCCTGA-AACCCATACAATACTCCAGTATTTGTCATAAAGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 207 -1396 VBT43:00057:00227 1 79 3902 39.020000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 39 -1396 VBT43:00058:00219 1 254 10608 106.079994 + --------------------------------------GCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGaACTTCTAGGAAGTTCAATTAGGAATACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 473 -1048 VBT43:00058:00220 1 161 7408 74.080002 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATATTCCAAAGTAACATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAATTATTTATCAATACGTGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAGCATCTGTTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1114 -524 VBT43:00061:00249 1 44 2098 20.980000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 662 -932 VBT43:00067:00200 1 88 3964 39.639999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGCCTATAGAGCTGCCAGATAAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1583 VBT43:00076:00240 93 190 4875 48.750000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 662 -900 VBT43:00088:00234 1 120 5784 57.840000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 404 -1195 VBT43:00090:00226 1 83 4273 42.730000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 576 -934 VBT43:00094:00222 1 172 8001 80.009995 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 425 -1176 VBT43:00095:00215 1 81 4110 41.099998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 188 -1391 VBT43:00098:00230 1 109 4227 42.270000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 105 -1412 VBT43:00050:00287 1 164 7305 73.049995 + --------------------------------------------------------------------------------------------------------AGAAATTTGTACAGAAATGGA-AAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 10 -1558 VBT43:00051:00295 1 114 5349 53.489998 + ---------CCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAGTAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 207 -1268 VBT43:00052:00282 3 206 8893 88.930000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAA-TCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 186 -1433 VBT43:00053:00282 2 70 2192 21.920000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAGAAAAAGGAAAGTAgtagtgGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1581 VBT43:00056:00270 34 133 4978 49.779999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1597 VBT43:00061:00250 80 162 3576 35.759998 - CCCATTAGTCCTATTGACACTGTACCAGTAA-ATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 387 -1226 VBT43:00061:00257 1 69 3511 35.110001 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 716 -841 VBT43:00065:00267 1 125 6093 60.930000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 82 -1371 VBT43:00068:00271 1 235 9699 96.989998 + ---------------------------------------------------------------------------------GAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 656 -882 VBT43:00071:00271 5 148 6997 69.970001 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 86 -1481 VBT43:00083:00262 1 115 5503 55.029999 - -------------------------------------------------------------------------------------AGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 770 -766 VBT43:00086:00286 1 146 6605 66.049995 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00063:00330 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 135 -1503 VBT43:00082:00322 1 44 2174 21.740000 - --------------------------------------------------------------------------------------------------------------------------------------AAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 114 -1376 VBT43:00091:00335 1 198 7966 79.659996 - -----------------------------------------------------------------------------------------------------------------TACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1648 -1 VBT43:00092:00308 1 33 1499 14.990000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 456 -1099 VBT43:00066:00385 1 124 5232 52.320000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTA--AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 576 -965 VBT43:00073:00350 1 141 6547 65.470001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 425 -1177 VBT43:00085:00390 1 80 4076 40.759998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 334 -1169 VBT43:00073:00439 9 185 7651 76.509995 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTAT-AACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 753 -870 VBT43:00066:00497 10 68 2801 28.010000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 15 -1546 VBT43:00077:00483 1 121 5832 58.320000 + --------------TGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 393 -1132 VBT43:00078:00474 1 157 7690 76.900002 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 600 -970 VBT43:00089:00493 1 112 5060 50.599998 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 706 -851 VBT43:00093:00480 1 124 5566 55.660000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGATAAATGGACAGTACAG-CTATAAAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 622 -865 VBT43:00055:00547 1 192 7838 78.379997 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-TGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-AAATTAAATTGGGCAAGTCAGATTTATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 430 -1167 VBT43:00060:00510 1 85 4183 41.829998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGGGCCTTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00092:00531 1 52 2417 24.170000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 421 -1182 VBT43:00072:00550 1 79 4090 40.899998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 163 -1386 VBT43:00081:00586 2 140 5567 55.669998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 160 -1372 VBT43:00087:00596 4 156 5216 52.160000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAG-AAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 278 -1163 VBT43:00056:00615 1 235 9291 92.909996 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATACCACATCCCGCAGGCTAAAAAGA---AAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGAT-AGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 832 -758 VBT43:00059:00623 1 92 4014 40.139999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAGCTGGCAGAAAACAGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 856 -765 VBT43:00065:00613 1 61 2706 27.059999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 614 -918 VBT43:00075:00636 4 151 6044 60.439999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00081:00626 1 52 2514 25.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 67 -1545 VBT43:00083:00617 1 70 3207 32.070000 - ------------------------------------------------------------------CAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1009 -631 VBT43:00084:00619 1 42 2067 20.670000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1039 -527 VBT43:00090:00614 1 111 3082 30.820000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAATCTGAAAACAGGAAA-TATGCAA-AATGAGGAGTGCCC-CACTAATGATGTAA-ACAATTAACAGAAGTAGTGCA-AAGATAACCACAGAAAGCATAGTAATATGGGGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 726 -774 VBT43:00053:00689 1 182 8506 85.059998 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTATAGAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 840 -719 VBT43:00085:00660 1 123 5660 56.599998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 402 -1200 VBT43:00085:00675 1 80 4018 40.180000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 265 -1337 VBT43:00090:00698 2 81 3746 37.459999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 613 -999 VBT43:00092:00686 1 70 2921 29.209999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGAGAACATCTATTGAAGTAAGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 620 -840 VBT43:00050:00718 1 221 9199 91.989998 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATCTATTGAAGTAAGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGAACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 79 -1497 VBT43:00073:00710 1 106 5222 52.219997 - ------------------------------------------------------------------------------ACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 405 -1132 VBT43:00077:00700 1 145 6934 69.339996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 601 -898 VBT43:00081:00722 2 183 7746 77.459999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 590 -976 VBT43:00083:00736 1 116 4913 49.129997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 455 -1085 VBT43:00074:00791 1 142 6767 67.669998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGATATAATTATTTATCAATACGTGGATGATTTGTATGTAGAATCTGACTTAGAAATAGGGCAGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 610 -933 VBT43:00084:00769 1 139 6364 63.639999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 343 -1125 VBT43:00092:00779 1 214 10077 100.769997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 78 -1481 VBT43:00098:00769 1 122 5188 51.879997 - -----------------------------------------------------------------------------GACAGAAGAGAAAATAA-AGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 939 -632 VBT43:00098:00782 1 111 5015 50.149998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1534 VBT43:00098:00791 28 174 7314 73.139999 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 543 -1044 VBT43:00099:00769 1 94 4231 42.309998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGC-GCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 839 -666 VBT43:00067:00804 1 177 7863 78.629997 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 993 -578 VBT43:00080:00833 1 111 5212 52.119999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 138 -1488 VBT43:00081:00824 1 56 2672 26.719999 - -----------------------------------------------------------------------------------------------------------------------------------------AATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 669 -905 VBT43:00096:00842 1 108 5164 51.639999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 207 -1418 VBT43:00090:00869 3 58 2397 23.969999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGGAG-AAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 739 -874 VBT43:00092:00888 1 69 3468 34.680000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1069 -526 VBT43:00093:00895 1 87 4121 41.209999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 810 -824 VBT43:00094:00865 8 55 2041 20.410000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 346 -1161 VBT43:00094:00894 7 181 8426 84.259995 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 261 -1288 VBT43:00098:00870 1 132 5596 55.959999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGGAAGTTCAATTAGGAATACCACATCCCGCAGG-CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1538 VBT43:00099:00888 2 144 7108 71.080002 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 178 -1273 VBT43:00055:00943 1 234 9255 92.549995 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGTCATAAAGAAAAGGAAagtagTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 497 -1056 VBT43:00067:00937 1 129 6129 61.289997 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1631 -1 VBT43:00077:00922 1 50 2407 24.070000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 667 -914 VBT43:00077:00928 1 101 4714 47.139999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGAAAAAGACAGCTGGGCTGTCAATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 911 -684 VBT43:00086:00913 1 87 3995 39.950001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 110 -1484 VBT43:00087:00949 1 88 4181 41.809998 - -------------------------------------------------------------------------------------------------------------TTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 978 -591 VBT43:00095:00911 1 113 5166 51.660000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGAAGTACAGAAGCAGGAGCGAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 934 -641 VBT43:00097:00942 1 107 4896 48.959999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1552 VBT43:00060:00976 66 194 6064 60.639999 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1651 VBT43:00087:00963 81 110 1446 14.460000 - CCCATTAGTCCTATTGACACTGTACCAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1025 -532 VBT43:00088:00957 1 125 5740 57.399998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGAAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 168 -1444 VBT43:00055:01032 1 70 3058 30.580000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1386 VBT43:00056:01041 4 110 4415 44.149998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTCCAATTAGGAATACCACATCCCGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 362 -1182 VBT43:00098:01003 2 139 6779 67.790001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 881 -741 VBT43:00053:01062 1 57 1627 16.270000 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGAGA---TCTAAAAGAACCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 305 -1184 VBT43:00056:01063 1 192 9036 90.360001 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 369 -1175 VBT43:00062:01066 1 136 6122 61.219997 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAGGAAGTATACTGCATT-ACCATACCTAGTATAAACAATGAGACACCAGGGAT-AGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 936 -652 VBT43:00064:01072 1 94 4116 41.160000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATTAAATTTATCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1046 -542 VBT43:00075:01080 1 92 3461 34.610001 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAACAGGAAAATATGCAA-AATGAGGAGTGCCC-CACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 517 -1023 VBT43:00083:01091 1 142 6601 66.010002 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 423 -1152 VBT43:00089:01084 1 105 4494 44.939999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCA-AGTAGCATGACAAA-ATCTTAGAGCCTTTTAGAAAACAAAATCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 756 -886 VBT43:00090:01087 1 40 1922 19.219999 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 554 -992 VBT43:00073:01128 1 135 5891 58.910000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 954 -524 VBT43:00084:01101 1 202 8497 84.970001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAA-TATGCAA-AATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 243 -1335 VBT43:00086:01119 1 104 4844 48.439999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1645 -1 VBT43:00087:01101 1 36 1659 16.590000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 1 -1630 VBT43:00093:01114 10 60 2472 24.719999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 390 -1136 VBT43:00071:01154 1 155 6954 69.540001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 858 -677 VBT43:00093:01159 1 147 6436 64.360001 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAAGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 591 -1051 VBT43:00098:01155 4 43 1927 19.270000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1638 VBT43:00098:01157 47 89 2047 20.469999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 706 -762 VBT43:00077:01225 1 214 9984 99.839996 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 475 -1056 VBT43:00091:01246 1 151 7108 71.080002 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 909 -639 VBT43:00069:01271 1 132 5545 55.449997 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATAGAGCGTATTATGACCCAC--AAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1555 VBT43:00076:01276 55 180 5927 59.270000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATGAAAGCATTAGTAGAAATTTGTACAGAAATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1544 VBT43:00083:01281 43 178 6253 62.529999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 613 -979 VBT43:00059:01317 1 90 3962 39.619999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 53 -1552 VBT43:00068:01320 1 77 3797 37.969997 - ----------------------------------------------------GCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 927 -702 VBT43:00069:01311 1 53 2384 23.840000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 3 -1533 VBT43:00075:01347 1 146 7206 72.059998 + --CATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 851 -696 VBT43:00081:01302 1 135 6103 61.029999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 685 -855 VBT43:00081:01307 2 143 6966 69.659996 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 43 -1491 VBT43:00085:01305 1 149 6647 66.470001 + ------------------------------------------GGAATGGGTGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTaGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 302 -1191 VBT43:00050:01378 11 197 8047 80.470001 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGAT-AGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1330 VBT43:00071:01385 1 161 6610 66.099998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 550 -1022 VBT43:00075:01383 1 110 5236 52.360001 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 61 -1576 VBT43:00078:01350 1 45 2221 22.209999 + ------------------------------------------------------------GTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 251 -1275 VBT43:00080:01356 1 156 7444 74.439995 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 494 -1108 VBT43:00086:01351 1 81 3280 32.799999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATCTTAGAGCCTTTTaAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1251 VBT43:00096:01363 1 131 6284 62.840000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1056 -532 VBT43:00092:01406 6 100 3994 39.939999 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATATGCaAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 863 -692 VBT43:00086:01521 1 127 5893 58.930000 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAAAAGACTTAATAGCAGAAATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 935 -644 VBT43:00078:01573 1 103 4695 46.950001 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 273 -1191 VBT43:00087:01578 1 217 10191 101.909996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 300 -1164 VBT43:00059:01626 1 217 10118 101.180000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT-TTAGAACCTTTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 558 -1050 VBT43:00078:01624 1 74 3672 36.719997 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 232 -1272 VBT43:00095:01600 1 178 7486 74.860001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGaCATTTACCATACCTAGTATAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 691 -837 VBT43:00063:01650 3 153 5851 58.509998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTATGAACTCCATCCTGATAA-TGGACAGTACAGCCTATACAGCTACCAGAAAA-GACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAA-CAATTATGTAGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 202 -1370 VBT43:00079:01675 2 107 3896 38.959999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGTAAATGGAG-AAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCT---AAAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 559 -1022 VBT43:00087:01691 8 107 4243 42.430000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1066 -547 VBT43:00094:01680 5 72 2667 26.670000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCA-AAGATAACCACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00053:01704 1 52 2386 23.859999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 438 -1183 VBT43:00083:01743 1 61 3112 31.119999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTGCTTCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 86 -1567 VBT43:00099:01701 1 29 1357 13.570000 - -------------------------------------------------------------------------------------AGAAAATAAAAGCATTAGTAGAAATTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 202 -1403 VBT43:00061:01797 10 86 3678 36.779999 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 736 -818 VBT43:00080:01797 1 128 5742 57.419998 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTTATCCAGAGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 419 -1051 VBT43:00089:01765 1 210 9450 94.500000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACATCTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 396 -1245 VBT43:00065:01835 1 41 2094 20.939999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1598 VBT43:00080:01832 46 128 4011 40.110001 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 470 -1057 VBT43:00081:01825 1 154 6854 68.540001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 458 -1179 VBT43:00088:01838 1 45 2342 23.420000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1497 VBT43:00052:01852 7 190 8956 89.559998 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 883 -768 VBT43:00054:01870 1 31 1308 13.080000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAGAGAAGCAGAACTAGAACTGGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1040 -526 VBT43:00059:01889 1 116 5478 54.779999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1630 -1 VBT43:00061:01851 1 51 2333 23.330000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 1628 -1 VBT43:00064:01892 1 53 2449 24.490000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 43 -1539 VBT43:00076:01869 1 100 4879 48.789997 + ------------------------------------------GGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 726 -899 VBT43:00076:01886 1 57 2805 28.049999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 238 -1321 VBT43:00081:01896 1 122 5361 53.610001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-TCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 978 -629 VBT43:00053:01935 1 75 3454 34.540001 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAATAATCTAAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 478 -1022 VBT43:00055:01942 1 182 8367 83.669998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 339 -1153 VBT43:00063:01947 1 190 9120 91.199997 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 418 -1238 VBT43:00068:01919 1 26 1335 13.349999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGGATTAGATATCAGTACAATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 625 -889 VBT43:00078:01905 1 168 7631 76.309998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTAAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGATAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 382 -1058 VBT43:00085:01949 1 240 10982 109.820000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 308 -1274 VBT43:00086:01916 5 102 3724 37.239998 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATCAGTAACAGTACTGGATGTAGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGA-GTATACTGCATTTACCATACCTAGTATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 316 -1161 VBT43:00090:01926 1 204 9300 93.000000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 626 -896 VBT43:00095:01931 1 160 7127 71.269997 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 173 -1377 VBT43:00098:01928 1 138 5357 53.570000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 599 -971 VBT43:00053:01968 1 112 5093 50.930000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 19 -1554 VBT43:00066:01963 2 109 4990 49.899998 + ------------------ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA-AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 272 -1260 VBT43:00081:01994 1 149 6684 66.839996 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 858 -771 VBT43:00051:02023 1 53 2353 23.529999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1073 -561 VBT43:00065:02028 1 49 1875 18.750000 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGTGCCCACACTAATGATGaTAAAACAATTAACAGAAGTAGTGCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1529 VBT43:00066:02013 68 216 6162 61.619999 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAA-ATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGG--AAGGAAAATTTCAAAAATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 891 -660 VBT43:00075:02041 3 133 6019 60.189999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 445 -1047 VBT43:00080:02033 1 188 8045 80.449997 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCACAGGGATGGAGAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA-ATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAA-TAGAGGAACTGAGAGAACATCTATTGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 346 -1178 VBT43:00084:02011 7 164 7372 73.720001 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGAACAAAATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 618 -899 VBT43:00086:02038 1 164 7136 71.360001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTTAATGACATACAGAAGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 422 -1112 VBT43:00087:02008 1 147 6747 67.470001 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAA-GGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 403 -1191 VBT43:00075:02096 1 88 4533 45.329998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 449 -1078 VBT43:00077:02099 1 154 6981 69.809998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGA-TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 226 -1308 VBT43:00085:02091 1 146 6293 62.930000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 11 -1598 VBT43:00097:02073 1 73 3656 36.559998 + ----------CTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 335 -1217 VBT43:00090:02128 1 129 5642 56.419998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 685 -911 VBT43:00099:02118 5 89 3681 36.809998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 726 -827 VBT43:00103:00093 1 129 6124 61.239998 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 102 -1473 VBT43:00109:00068 1 106 4154 41.540001 + -----------------------------------------------------------------------------------------------------AGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA-AAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00111:00062 1 53 1847 18.469999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAATGAACAAGTAGATaAAATTAGTCAGTACTAGAATCAGGAGAGTACTA
2: NOTANAC|HIV 471 -1078 VBT43:00115:00058 1 134 5823 58.230000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACgAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1359 VBT43:00119:00068 5 137 5159 51.590000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGA-TTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCGGGGCTAAAAAAGAAAAAATCAGTAACAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 745 -807 VBT43:00122:00075 1 130 6032 60.320000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 20 -1483 VBT43:00128:00076 1 179 8650 86.500000 + -------------------CTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 136 -1400 VBT43:00133:00059 1 152 6228 62.279999 + ---------------------------------------------------------------------------------------------------------------------------------------AAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAAGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 359 -1197 VBT43:00134:00059 1 126 6005 60.049999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACGATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 302 -1189 VBT43:00149:00075 1 192 8715 87.150002 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAACAAATCAGTAACAGTACTGGATGtTGGGTGATGCATATTTTTCAATTCCGTTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCCTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 307 -1297 VBT43:00103:00149 1 78 3609 36.090000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 985 -651 VBT43:00111:00124 1 46 2108 21.080000 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 598 -978 VBT43:00141:00144 1 106 4754 47.539997 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 468 -1009 VBT43:00104:00161 1 205 9783 97.829994 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGAGAACATCTGTTGAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1628 -9 VBT43:00106:00182 1 45 2175 21.750000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGA--------
2: NOTANAC|HIV 1009 -531 VBT43:00113:00153 1 141 6331 63.309998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCC-CACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 781 -787 VBT43:00113:00191 1 114 5147 51.469997 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 564 -1002 VBT43:00116:00189 1 116 5544 55.439999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 423 -1136 VBT43:00117:00184 1 123 5931 59.309998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 283 -1266 VBT43:00118:00165 1 132 5782 57.820000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 32 -1531 VBT43:00121:00172 1 119 5534 55.340000 - -------------------------------AATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATCGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1331 VBT43:00139:00185 5 164 6351 63.509998 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGAAAGTAGTAGTGGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 163 -1315 VBT43:00144:00192 2 210 7712 77.119995 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATACAATACTCCAGTATTTGTCATAAAAGAAAAAGgaaagtaGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAGTAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG--CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 808 -806 VBT43:00100:00212 1 69 2562 25.619999 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATCCAGGGATTAAGGTAAAACAATTATGaTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1022 -527 VBT43:00107:00200 1 133 6343 63.430000 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 553 -970 VBT43:00113:00212 1 160 7042 70.419998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATaAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1023 -620 VBT43:00116:00227 4 42 1873 18.730000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1640 VBT43:00129:00200 80 120 1940 19.400000 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 902 -571 VBT43:00134:00239 1 209 9792 97.919998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1642 VBT43:00138:00245 43 81 1832 18.320000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1622 VBT43:00142:00224 27 85 2890 28.900000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 299 -1217 VBT43:00101:00277 2 166 7356 73.559998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 272 -1258 VBT43:00105:00289 1 153 6586 65.860001 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGaCATTTACCATACCTAGTATAAACAATGAGACACCAGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 143 -1368 VBT43:00108:00260 1 178 7081 70.809998 + ----------------------------------------------------------------------------------------------------------------------------------------------CAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGaCAGGGCTAAAAAAGAAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 306 -1190 VBT43:00114:00297 1 187 8695 86.949997 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAATCAGTAACAGTACTGGATGTGGGAGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACaAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 632 -897 VBT43:00120:00290 1 153 7196 71.959999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 658 -909 VBT43:00142:00289 1 114 5065 50.649998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 380 -1113 VBT43:00145:00269 1 189 9057 90.570000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATATGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1013 -586 VBT43:00102:00328 1 83 3936 39.360001 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGAAGTGCCCACACTAATGATGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1615 VBT43:00116:00301 80 144 2735 27.349998 - CCCATTAGTCCTATTGACACTGTACCAGTAA-ATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 212 -1301 VBT43:00116:00302 1 169 8149 81.489998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 940 -614 VBT43:00117:00317 1 128 5873 58.730000 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 609 -987 VBT43:00122:00341 1 86 3719 37.189999 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 202 -1331 VBT43:00129:00319 11 158 6573 65.729996 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGG-CTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1540 VBT43:00132:00340 6 146 6952 69.519997 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 449 -1022 VBT43:00111:00367 1 210 9373 93.729996 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATCTAC-ACACCAGACAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 758 -778 VBT43:00117:00359 1 146 6305 63.049999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTTATCCAGAGATTAAGGTAAAACAATTATGTAGACTCATTAGAGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 431 -1181 VBT43:00128:00417 1 70 3658 36.579998 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 702 -867 VBT43:00145:00444 1 113 5645 56.449997 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 553 -955 VBT43:00108:00545 1 175 7451 74.510002 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATaAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1627 VBT43:00111:00544 31 84 2497 24.969999 + CCCATTAGTCCTACTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 678 -870 VBT43:00114:00527 1 133 5673 56.730000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTACCAGAAAA-GACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 432 -1100 VBT43:00117:00523 1 150 7229 72.290001 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 744 -841 VBT43:00124:00503 1 96 4215 42.149998 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG-AAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 437 -1220 VBT43:00124:00512 1 25 1318 13.179999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATGTGCTTCCACAGGGATGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 81 -1440 VBT43:00106:00591 1 167 6743 67.430000 + --------------------------------------------------------------------------------AGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCCGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1473 VBT43:00111:00582 22 228 9176 91.759995 - CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAA-AGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 981 -629 VBT43:00118:00561 1 72 3336 33.360001 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 473 -1180 VBT43:00132:00569 1 29 1494 14.940000 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATATTCCAAAGTAGCATGACAAAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1628 -1 VBT43:00133:00591 1 53 2568 25.680000 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 312 -1217 VBT43:00135:00570 1 152 6954 69.540001 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTAACAGTACTGGATGTGGGTGATGCATA-TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 332 -1275 VBT43:00141:00563 1 75 3399 33.989998 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 16 -1510 VBT43:00103:00637 1 156 7550 75.500000 + ---------------GACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 431 -1083 VBT43:00109:00642 1 168 8292 82.919998 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1078 -524 VBT43:00123:00626 1 80 3838 38.379997 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGGAAAGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 661 -906 VBT43:00129:00602 1 114 4917 49.169998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAA-GACAGCTGGACTGTCAATGACATACAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 145 -1458 VBT43:00132:00605 1 85 2695 26.949999 - ------------------------------------------------------------------------------------------------------------------------------------------------AAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 469 -1142 VBT43:00133:00639 1 71 3189 31.889999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1633 -1 VBT43:00137:00609 1 48 2229 22.289999 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAACAAGTAGATAAATTAGTCAGTGCTGAAATCAGAAAAGTACTA
2: NOTANAC|HIV 84 -1483 VBT43:00108:00663 1 114 4951 49.509998 + -----------------------------------------------------------------------------------AGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA-AAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 323 -1186 VBT43:00108:00668 1 173 8471 84.709999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 529 -1118 VBT43:00116:00678 1 35 1669 16.690001 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATAGTTATTTATCAATACATGGATGATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 212 -1425 VBT43:00132:00690 1 45 2304 23.039999 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 28 -1473 VBT43:00135:00688 1 181 8375 83.750000 + ---------------------------GTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1629 -1 VBT43:00136:00687 1 52 2417 24.170000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 789 -801 VBT43:00141:00654 1 92 4215 42.149998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 389 -1167 VBT43:00144:00690 1 126 6322 63.219997 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 862 -692 VBT43:00111:00712 1 128 5947 59.469997 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAAAAGACTTAATAGCAGAAATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 638 -978 VBT43:00133:00701 2 67 2756 27.559999 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 928 -665 VBT43:00134:00702 1 89 3974 39.739998 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 597 -1031 VBT43:00139:00729 1 54 2083 20.830000 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 534 -1085 VBT43:00100:00765 1 63 3165 31.650000 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 634 -869 VBT43:00108:00785 1 178 7955 79.549995 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGATTCTACACACCAGACAA-AAACATCAGAAAGAACCTCCATTCCACTGAATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1568 VBT43:00125:00766 11 123 5541 55.410000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 141 -1400 VBT43:00131:00771 1 147 6090 60.899998 + --------------------------------------------------------------------------------------------------------------------------------------------TTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 727 -863 VBT43:00133:00799 1 92 4589 45.889999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 449 -1118 VBT43:00137:00784 1 115 5543 55.430000 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1635 -1 VBT43:00143:00796 1 46 2192 21.920000 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA
2: NOTANAC|HIV 863 -635 VBT43:00147:00794 1 184 8364 83.639999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 851 -696 VBT43:00149:00791 1 135 6103 61.029999 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 912 -625 VBT43:00105:00812 1 145 6448 64.479996 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGGCTTAATAGCAGAAGTACAGGAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 452 -1078 VBT43:00111:00810 1 152 7447 74.470001 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 41 -1517 VBT43:00123:00804 1 124 6279 62.789997 - ----------------------------------------CAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 286 -1199 VBT43:00129:00845 1 197 9260 92.599998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1060 -585 VBT43:00133:00826 1 37 1773 17.730000 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCAAAAATGAGGAGTGCCCACACTAATGATGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 157 -1439 VBT43:00146:00802 1 92 3283 32.829998 - ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 382 -1126 VBT43:00105:00860 1 174 8544 85.439995 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 413 -1098 VBT43:00106:00896 4 173 7828 78.279999 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACACCAGAGAT-AGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 497 -1071 VBT43:00108:00862 1 114 5466 54.660000 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1056 -537 VBT43:00108:00883 1 87 3196 31.959999 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCA-AAGATAACCACAGAA-GCATAGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1554 VBT43:00122:00854 6 132 6225 62.250000 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 740 -835 VBT43:00123:00860 1 107 4842 48.419998 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 832 -758 VBT43:00128:00870 1 92 4190 41.899998 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 714 -892 VBT43:00137:00886 1 76 3667 36.669998 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGACAGTACAGCCTATAAAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 101 -1464 VBT43:00142:00855 6 122 5040 50.399998 - ----------------------------------------------------------------------------------------------------TAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGATCGACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 496 -968 VBT43:00145:00853 1 218 9965 99.650002 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 309 -1183 VBT43:00101:00937 1 190 9358 93.579994 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 77 -1573 VBT43:00102:00945 1 32 1524 15.240000 - ----------------------------------------------------------------------------TGACAGAAGAGAAAATAAAAGCATTAGTAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 94 -1483 VBT43:00103:00903 5 109 5030 50.299999 - ---------------------------------------------------------------------------------------------AAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 741 -756 VBT43:00104:00911 1 185 8466 84.659996 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 537 -978 VBT43:00110:00920 1 167 7614 76.139999 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 517 -1120 VBT43:00113:00924 1 45 2038 20.379999 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 1 -1610 VBT43:00114:00936 132 202 3492 34.919998 + CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 715 -879 VBT43:00126:00917 1 88 4310 43.099998 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 156 -1370 VBT43:00129:00942 1 162 6607 66.070000 + -----------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTagtggcAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 481 -1152 VBT43:00134:00937 1 48 1774 17.740000 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGTAGCATGACAAAAATCTTAGAGCC-TTTAAAAAACGAAATCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2: NOTANAC|HIV 189 -1344 VBT43:00141:00902 1 155 6435 64.349998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAAAGGAAAGTAgtagtgGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2:
2: $PFSEARCHV3 -n -t 1 -q -o 8 ./hiv.prf ./hiv.fastq # FASTQ to SAM
2: @HD VN:1.6 SO:coordinate
2: @SQ SN:NOTANAC|HIV LN:1680 DS:Profile for testing
2: VBT43:00033:00068 2 NOTANAC|HIV 314 255 31M1D44M * 0 76 CAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATT 888BC;BBD8::BB<ABBBAE<C9;:?@A;::BB7BD?C>C>CC5::AA@C<??>F<99:;A<CB>;;?;;;@C; AS:i:3020 NS:f:30.20
2: VBT43:00042:00214 2 NOTANAC|HIV 1 255 63M * 0 63 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTT ?C:CC>CAAD<CDC>DDBABACBBB>BBBBBB7A>AA:A?=BC>C=CJ@DAC2::+:99(6;5 AS:i:3064 NS:f:30.64
2: VBT43:00046:00240 2 NOTANAC|HIV 271 255 80M * 0 80 CAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTC <B<C<=@8>:AAE>EBBCCN>ABBCC:BBBBBBB0ACCCCC0@:689:18?>;646:588>@CB9=@>>5?<@97777'6 AS:i:3993 NS:f:39.93
2: VBT43:00018:00254 2 NOTANAC|HIV 251 255 36M * 0 36 CTCAAGACTTCTGTGAAGTTCAATTAGGAATACCAC 7:7<7769A:A@>A::3:A3::<A2::;?9?99189 AS:i:1717 NS:f:17.17
2: VBT43:00021:00272 2 NOTANAC|HIV 887 255 125M * 0 125 CAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGG CB;C@@@<ABABG<>>>993:BA:><9999+:??A:CB@?9;8889+9<6=:>>>@MKDD>BFBCBCC=A?=8888+99<<?2?ACC<A;AABBCC?8AACCCB?8>@@@9?B@@8?8?8D8AC< AS:i:5507 NS:f:55.07
2: VBT43:00035:00274 2 NOTANAC|HIV 770 255 82M1D46M * 0 129 TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAG <AAB@B<AC<BE@>>>,;;,;<BB;C=CC:AB=BEC@@9::5:AA?:::,:?2::,:9:::+9?9A<C???BBCCCB;?9:99+9199>?7@@?ABE>DDCB>CDBBBCE=CC??:?B;@@??9?AFA AS:i:5534 NS:f:55.34
2: VBT43:00037:00292 2 NOTANAC|HIV 655 255 92M1D16M * 0 109 AAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCA 55555&5:A<A@AE>CC=A>CC=>?;?=B@BB;BAAA9A<AABC>ECD>DCC=BAB9993:A>DCFFFBBCCC>BAEECDD??9:7:ACGN8LBBDBA@?=DAAD??> AS:i:4795 NS:f:47.95
2: VBT43:00014:00314 2 NOTANAC|HIV 910 255 119M * 0 119 GCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCA 55?:99:(:::D9C::;8?::::,::1:;AA?????@:ADCABBC199A9977)9@@?A4A??D9?9?@AABBB=9::?A??:?AAH<CCDC<C<C;A;AB:AA???>999)9=1=>?? AS:i:5494 NS:f:54.94
2: VBT43:00017:00332 2 NOTANAC|HIV 74 255 54M * 0 54 CATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA ==?;B>>>;;5996666):>>9/;AAC;:::ACJN<CC<CC??@AFD9DD199+ AS:i:2678 NS:f:26.78
2: VBT43:00039:00346 2 NOTANAC|HIV 869 255 46M1D16M1D75M * 0 139 CAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGGAGATTCTAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAGAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCA <C?>:??CEMFD>BBAA;AB=BCCC=CCEAA<AA@AB<BBB<AE??>5>:99+9>9908;<<1=>9@:@@@ACDCE=CBEBA::2:9<9:::(9<<<D=BB==:=8@>@>:>=>2>@????9:845.789:588@7> AS:i:5161 NS:f:51.61
2: VBT43:00045:00317 2 NOTANAC|HIV 838 255 125M * 0 125 TGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC <BJCEC???992::::+:9@;BF=BBEDDC=CCBB<BA@@ACC=CCBC>CB<B?AA<A@@@A;BCBBB;BBB<CBBBBB2A>::/:===6;:?AA7AC>B?CCCCFEDMBMCBBA:9/8998999 AS:i:5665 NS:f:56.65
2: VBT43:00027:00364 2 NOTANAC|HIV 703 255 70M * 0 70 CATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATAC ==?@<BCCCCC=CB>CCBBDBBBCC?BBACBBB::::<A>????2>AA??@@C>BB:;;::9?>>>>9:5 AS:i:3464 NS:f:34.64
2: VBT43:00042:00499 2 NOTANAC|HIV 368 255 131M * 0 131 ACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA @?>;B>?8?>CCBCB995=555,:>8>AAA;ABAA@@AC<AA<BCCCJCB?:ABC:>=:;?;?999CBCCCD<CAA?64187>ACDC9??>8=;28489:882;@<;4<893;9@E6AAA??:;;?=<:9* AS:i:6671 NS:f:66.71
2: VBT43:00017:00696 2 NOTANAC|HIV 1 255 62M * 0 62 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGT >@9BC>CA?@>GHGBAAACBAAB??8?@>>??+:1;>9?A=CC@D@CC;@?C:?>,:::+:: AS:i:3013 NS:f:30.13
2: VBT43:00023:00665 2 NOTANAC|HIV 522 255 36M1D45M1D22M * 0 105 AAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTAAGAGAACATCT 9:*6B7ABBAABCCC:??C:B???;@@@@9:1:?=9919>>>>>::2::::ACDD:A@@@7?A@A9ABCCCCDCC=AABA5AAA@A=E9??H?BA@@9>>=>< AS:i:4242 NS:f:42.42
2: VBT43:00029:00750 2 NOTANAC|HIV 626 255 88M * 0 88 TATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA +//6:=4B::::,:?8@@@??@DFAEB>BCDDDD+@?>ABBBC<CE<B=BB?BA<B=BCFC>ECDC:A<@A@C:@?B=BBC<<88./' AS:i:3930 NS:f:39.30
2: VBT43:00037:00780 2 NOTANAC|HIV 865 255 50M1D16M1D32M2D58M * 0 160 CTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGGAGATTCTAAAGAACCAGTACATGGAGCGTATTATGACCCACAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAATTAT ???9????<BBCCCBA;AB993:@8:BA>8>AA??<AAABB;@AB=AA977(7783(39;<5>9??7?B<B=A@FECAAA=CCCCC993:@?>?@5>>>>7??@@;@<A@:9::929@AAA>>7>?@>6;=77/78=-5/9?:?A@@AGAA:B9.. AS:i:5588 NS:f:55.88
2: VBT43:00027:00977 2 NOTANAC|HIV 240 255 105M1D28M * 0 134 TAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTATTAGATGTAGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCA 386//+/ABC?DDBA=AABB=CBBB>C=CC>CB<A<??8?;AAC=A@@???:?CBCE9B::::::(::::::):??@CJ?JCA@AC9??CBA;;8<C@AA??@?7799+5<495?:9929BA??@7?@@B;CD AS:i:5564 NS:f:55.64
2: VBT43:00047:00970 2 NOTANAC|HIV 19 255 117M * 0 117 ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA BAA:88B;EDCBBB3@3::;??9?B<A<B@;???9BG,:;;,:A9BA:AD>DC=B<DB?BBCAAA=CA::::2:AEE9DCCB=BDE???@9?E<BBCDBBDC9>>199:+:1:19<@ AS:i:5832 NS:f:58.32
2: VBT43:00011:01001 2 NOTANAC|HIV 528 255 91M * 0 91 AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGA CCBCCDCCC:>>B<B@@B;99:?AA:@@@@AA9AAC???AA<??>>D9:93:??A39:A=@?@B999A9903;;<=-?CCCC<E:>:99CA AS:i:4315 NS:f:43.15
2: VBT43:00048:01010 2 NOTANAC|HIV 513 255 186M * 0 186 TAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCGCTGGATGGGTTATGA <AEFFE0EBCC:@@>CDGCAAACA=AAA9???C@CCBBBE=EBB???9?AAACBBC>BAAAACAA;ABBB:DCGF?BBBCCDDDC=B@@@@2@CBBC>C<BED>CCCC=CCAAB>>7>A<BBB@A2:929@@D@>>C;A?A999999)8B=;;;>@5@C:A:A@999199>9:>9@=??/6.6:99 AS:i:8496 NS:f:84.96
2: VBT43:00036:01093 2 NOTANAC|HIV 965 255 132M1D50M * 0 183 CAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAGACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATAT ?<<?4?>>B<B>CDCDDAA=ABBBBCB=CCEE<AAA>9;;A;A<BC<CBBBBA???7?B:BBA?:@ABB;ABB:B=BC<BABBB>B@>>?0999)9??>99988)9?A@2:7DADB4ABCG;;6;>?@9999*::2::@9@MMD?EBBA@@::::+:A>>8?:@>?999/9@@CBCCC=CAA AS:i:8079 NS:f:80.79
2: VBT43:00048:01143 2 NOTANAC|HIV 1 255 51M * 0 51 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT 9>1?A;ABDB;B@>8<BCCCBBBBB=BACCCC3B<C?9??;AA;A;AA:@A AS:i:2472 NS:f:24.72
2: VBT43:00008:01197 2 NOTANAC|HIV 397 255 103M * 0 103 CCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA A=BBA?CD>=3//)/:79:BCC=BBB:??=BBBCBCBB9::?A;???AAA7>8?@@?C:BB@076/78>????9?B@@:;;;8=9?>3><=;;;<;;8;:;;, AS:i:5329 NS:f:53.29
2: VBT43:00046:01178 2 NOTANAC|HIV 40 255 98M * 0 98 CCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAA B<CC>B=BB?BB>8??7@AA5@A8??:@B>DD>D<BA=BDBBBC=BB????5?BBC9DFDC>CCCCCCD39839AACCCCE<BC9???4>:?:@8>>> AS:i:4910 NS:f:49.10
2: VBT43:00022:01216 2 NOTANAC|HIV 685 255 62M1D19M * 0 82 TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATG FC@BADC<C<AABB>CBB<CBB<A?A=>=8>B>ECCCCCCC993:????AAABBB>B??>>1>????@?C=C?;::::::: AS:i:3644 NS:f:36.44
2: VBT43:00017:01288 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA =?2773:A?<??9?B?@<??;4;7??BCFCBBCCC=B=ABBA:B>>@?AC>9 AS:i:2514 NS:f:25.14
2: VBT43:00025:01284 2 NOTANAC|HIV 350 255 149M * 0 149 CAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA AC>C<B<CI>CBC??;3;>@A<AB@<B<AA@@:>>AABBB:B@299??:@??????A9992:@A@BCCC?CCC;??7>@A??@@>789@?:?@@@AB<B;A?>??4=>=9@@5A;????@9??;;49>>9A:AB6?;;;=<:68888<< AS:i:7271 NS:f:72.71
2: VBT43:00041:01311 2 NOTANAC|HIV 854 255 87M1I22M * 0 109 GAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGATACATGGAGCGTATTATGACCC <A6@6:=7::;;:928>>@=CAACCCE=BBB@;AC<FABA8AAAAA;AABB?9=@?;CA>>AA/AABA5@?>>:;9?AA5AC<C?C:79>@@BC=BBCCCCB;@C@>??? AS:i:4576 NS:f:45.76
2: VBT43:00049:01371 2 NOTANAC|HIV 645 255 102M * 0 102 CACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA BCDBB>CBBDDCEEG08:9BBAAB;BB=E=B?9@@<A<C?A?<BBB@8@8>?AA;@??:>>>:8;A===5=A;C@@@AABBBB<@BAA>>>>???9=9999) AS:i:4800 NS:f:48.00
2: VBT43:00023:01679 2 NOTANAC|HIV 723 255 127M * 0 127 ACAGCCTATACAGCTACCAGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATT CBBAA<BABCDBBAA@;8:86666&//AA?ABAA?>574BB<BCDC?BA<>?@:AB:AB===(999+99?A<D;AB9AA:@@@>=999/9?B:ABB:@?9@;B:;;;;.;?9@;>:;;:>=?C?;94 AS:i:5767 NS:f:57.67
2: VBT43:00024:01846 2 NOTANAC|HIV 358 255 91M * 0 91 TTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTC A?B@@88838>=A<BBC=B=BBBB?@<<<4773:C<AABC>BBBBBAAA;AA:??@>?A@<8:::5=@;ACCC@?AAB=@>>7>;<88838 AS:i:4443 NS:f:44.43
2: VBT43:00025:01897 2 NOTANAC|HIV 1630 255 51M * 0 51 GGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGCACTA B2591:@;6<>7>?@@A99939>BBCBAB@BECJ9899CCC=BBBBA@AA9 AS:i:2235 NS:f:22.35
2: VBT43:00034:01890 2 NOTANAC|HIV 1 255 86M1D33M * 0 120 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAATAAAAGCATTAGTAGAAATTTGTACAGAA CB<CG?DCCC=BA@:AB???CCBBB>DECFCC8C>DD=BBACD:A:::2:@A8??,:::,:B8>?-::9>?8?8??@BBB@AA9:::::*5:<<,?@AA;==66666*6>2?>>=BBCA AS:i:5429 NS:f:54.29
2: VBT43:00027:01904 2 NOTANAC|HIV 577 255 53M * 0 53 TTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATT ;0>?<=8>BBB<AAABBCBA?796666*:ABCD<A<ABBBCBBB<BB@@A;;: AS:i:2600 NS:f:26.00
2: VBT43:00037:01920 2 NOTANAC|HIV 391 255 108M * 0 108 ACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA AA<CABB=BBDC@A@C:8869BBBCCBB<BBB:?B<BBBB>@ABBB?@@:?<;;5859=CCCDC=CAA29929<ABCBB=BABB=CAA<A<BB;BBBBBCCA@9999* AS:i:5588 NS:f:55.88
2: VBT43:00048:01921 2 NOTANAC|HIV 392 255 139M * 0 139 CCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGA B<CABE>B?BBBCBI<C@:@CBBBAAB=BBB:@@<>AAB=??A@?@@A9@?>>:>9>;CCCBD=BCD<BA:A>CCBBA=B?>@<AAB=B>BB:AAABBBBBA@@@@?3ABB=CBBBB<BBC8BEEFE0CBDD9@@=BCA AS:i:6908 NS:f:69.08
2: VBT43:00035:01950 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BCC:>:>FB<BB<BAA>?AA>9@<ABBABB??@@B=A;@B@A=B@>@>ACA9 AS:i:2395 NS:f:23.95
2: VBT43:00061:00027 2 NOTANAC|HIV 231 255 60M * 0 60 CAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCC BACBCD<BC?D>??:>@>>;AAAA=BBCE=BBAB:@;@C;CC=B;=;3=5:;?9>AA==0 AS:i:3030 NS:f:30.30
2: VBT43:00060:00064 2 NOTANAC|HIV 34 255 92M * 0 92 TTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA ;4=B;BB>CB=C=EC=C@>8>?,:::(6<7>@:AA>AC=C=CB=BBBBA>8<;>===/=>@@7BCCC=BBBB@>>:>D:A@?@@988+8=19 AS:i:4525 NS:f:45.25
2: VBT43:00085:00090 2 NOTANAC|HIV 81 255 68M * 0 68 AGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA >9666+:>??1?CCD7CCCB<BCCBBBF3::2:DB>@:::29A6>>>2;0709<CBCC1BB:BCBBC3 AS:i:3215 NS:f:32.15
2: VBT43:00060:00142 2 NOTANAC|HIV 321 255 146M * 0 146 AGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGAT BCC>@ADFBAAABB:??CABBID@@>>>3AB>C>E=CC=CCCBAA:@@@B<A?B:??9?AAAD@?99:@4@?;ABBB=CAABB@?>7::2:@>:;@:909@?4?A9??A@997?=9=8=3>>=;>>7<5@9?:D3A9>3>A5A5?? AS:i:6851 NS:f:68.51
2: VBT43:00062:00112 2 NOTANAC|HIV 494 255 110M * 0 110 CAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA AABBB/BCB<BBCDB:>??5?DEJK0CCCC:AA=BCCBBBB@@;CED9>>>B7>>C@?>9>>>>@@5?:>@@@?;9>AA@@@@@:@@@@8ACDB5@?A872?8826::;= AS:i:5263 NS:f:52.63
2: VBT43:00063:00101 2 NOTANAC|HIV 163 255 43M6I106M * 0 149 CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA B:BCA;86:CDBD=A==7772:ABCECE=CCCCC4C=BC:CBBDDABBB=B@@9CB<A@@@?3?8@A9>>ACC;BBBAAA<CC=@;BA;AACA:>?@@6><CD=???F<D=DB;AA3;2:A:@;ADC:?@@CCC6:8@?@6@@@A<<?-699::* AS:i:6462 NS:f:64.62
2: VBT43:00063:00107 2 NOTANAC|HIV 678 255 93M * 0 93 ATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACAT A@;@;ACCB=DBBB:B=CBCC?ECC=CBB=AAAAAA:AA:ADCCBCCCCB<AAAA@BCA:;:;>:::::*:>>@ABBE=E:::?@?;AB@AA? AS:i:4386 NS:f:43.86
2: VBT43:00071:00106 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ::29:-:@A<BB?GGCCCFBB;B<BBBBDA@ABAA:A<ABBB;A@@@C@D?9 AS:i:2514 NS:f:25.14
2: VBT43:00072:00113 2 NOTANAC|HIV 886 255 131M * 0 131 ACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA ABB=BBBD<?BBBB=BBBBC=AAA>>>>>></=?AD:CBA@;A@===5@A;@<@CBAHCCC>AAACCCC=BABABBB399@@@5@BCC<C<C@>@>BB<BCABACB9??@@;BE;;5;7>7>9BC<DC711 AS:i:5827 NS:f:58.27
2: VBT43:00072:00198 2 NOTANAC|HIV 300 255 220M * 0 220 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAA <>>>B0B>BBBB0B???CC>CCCBB@BB>DBBA@>6???A>?=;55555*8A<B=C=??;?BBCBA:AC@@<@BB>B<BB>>>@>;@86629A<ABCC=C??????A9992:ABBCBCC?BBB:??9?BBB???DBBBCD>BBABAA<?<CBBAA9@AA17737<@AA??8?@@@;D??9?9??4?GA@@@HCA@A@@?,>??:BA@==3;;;.;HGEDD AS:i:10747 NS:f:107.47
2: VBT43:00081:00153 2 NOTANAC|HIV 585 255 119M * 0 119 AGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC ?AA6A??@??B?>795955':CACB?D?DBCBDCCC=CCCCC?=8;>9BBBBB7BB=CBBCDCCC=CBBABBBBB-BCBAABAE8A?:B6;=589199@@AC;A9991917??A9B@?: AS:i:5303 NS:f:53.03
2: VBT43:00085:00151 2 NOTANAC|HIV 1016 255 136M * 0 136 ATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGG A@ABB:BD:BBBB;???A9?AB9A<AA=@@@BEEE8CBB9???4?ABBBABBB/@@??8?@??AA7BAAABA;C@B@?9888(8B<B=C=CCBC=DCCCBBBBBB7BBAA;A<BBABB;@<BDCEBCB=:9:@@@4 AS:i:6450 NS:f:64.50
2: VBT43:00098:00159 2 NOTANAC|HIV 1 255 44M * 0 44 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGG AA5AB;BABB:>>@;AAA;78ACCE<AAAAB@4>9@@2::;@@; AS:i:2100 NS:f:21.00
2: VBT43:00056:00208 2 NOTANAC|HIV 56 255 70M1D32M1D37M * 0 141 CAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAGATTTCAAAAATTGGGCCTGAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAA ;???5??8>@888@DB9>:?B?EGCDBB>:99999(8>??4@AAA<BBB>>@>7<<4<????@CE=CE6::,8192:<A@9B?>>1=>>>>0?;AB9>9>999+9A4BB??@==>=>>7>AB99929?>@@?>19999) AS:i:5858 NS:f:58.58
2: VBT43:00057:00227 2 NOTANAC|HIV 207 255 79M * 0 79 TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCA 8AA:@A8><<<</;;?ABBCAAA:ABBBBB<BA=B=??:?BCD=BAAA=CCED=999CAB<BC=CC=C>CC=B<BBC<B AS:i:3902 NS:f:39.02
2: VBT43:00058:00219 2 NOTANAC|HIV 39 255 167M6I51M1I29M * 0 247 GCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGAACTTCTAGGAAGTTCAATTAGGAATACCA BC>BB<@<CB=BBC=>@7<??6?E=GD9?@?DF?C=CB;AAACBB<A?>???3>>CG4B>>?;DDCCBBB:@@9>AAAABB@6AB2988*44;8?<AABC.AA4=>;;>0?:@B<F<CCFCD8CB;C;??CAFFBCC>CCAAAA8BCCCCAA<CADDE1A:AA9C768CCAAA;=>=2<>7;;:::*878::<;9>?6?999@A;CB;A:@A?DBA@9@;<=6..(/=8<//;<A<@E=?@9?;??9?:??>8: AS:i:10608 NS:f:106.08
2: VBT43:00058:00220 2 NOTANAC|HIV 473 255 161M * 0 161 CAATATTCCAAAGTAACATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAATTATTTATCAATACGTGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAGCATCTGTTAAGG @>7@5:1:1::-:@A<???@>667772:BCAFCCCB<AAA5???AA5ACCC7CB;BBAB@@?;A<CCC9>>>>9?9>AAE;DA==;;279:?@@@@9>?AA@=>=.7667+7=?B6;;;BB>=:=646777'7==;>7=5;;KCB@A@AA??;9..'.'.3 AS:i:7408 NS:f:74.08
2: VBT43:00067:00200 2 NOTANAC|HIV 662 255 88M * 0 88 ATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGCCTATAGAGCTGCCAGATAAAGA BA>>:::,6><B>DB;@B<B:>;7>7@GEC;A399>=5>?>6>@A9?A?99099909C@@@@>AAA:AGB@????C=;2;;9=??/45 AS:i:3964 NS:f:39.64
2: VBT43:00076:00240 2 NOTANAC|HIV 1 255 98M * 0 98 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGC AA9CC=BBBB>ABB=BCB?@ACECC=BBEEKK9@9?B5::@DD:A;@B=BEB;?G-:::,:A9@>3769?A<B=CB=BCBAA@;<<3333(3<;;,8@ AS:i:4875 NS:f:48.75
2: VBT43:00088:00234 2 NOTANAC|HIV 662 255 120M * 0 120 ATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAG A@AB???:??9?=CC=:959;A@CC=CCDD:B<BBBB<BBB<AAA@ABBBAA:AG>DA@ABBHCCB=BCDDCCCCBBB<B?????2????CCCE?EAAA@A@=DGBBA???<66/6:4:< AS:i:5784 NS:f:57.84
2: VBT43:00090:00226 2 NOTANAC|HIV 404 255 83M * 0 83 TAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGT 9>>9?<7@B?@?B??7?<?4:939D???@@C?@@CC>A;97@?<?6@>>==/=;64::/:5;>::66669H:@@=9=6;@576 AS:i:4273 NS:f:42.73
2: VBT43:00094:00222 2 NOTANAC|HIV 576 255 172M * 0 172 CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAG AA<AABC<DAAA:ACDCBBBCB898855'9?@@B;B;CCB?AAB<4><@A95929?08;@??.>?9??>?????9@?@BADDDD*D>>9<?::1?A6<9@@:>>9>:@AA@9@@@@6A9A>>>9B@@;A??499>;<=3=@9?@@@@@?;;;9??AAA???>:;3;;;?E/? AS:i:8001 NS:f:80.01
2: VBT43:00098:00230 2 NOTANAC|HIV 188 255 18M6I85M * 0 103 TAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCC <CA4:::::*67>><E?@@BCCBC=BCC<CC>CBBBB4B>CECBB:::5:DCBCB=BB=C=BB=BBCB=CA@@=BDFE<BBBBCB=AA=AA;A=BC<C=BAA:A@>;;; AS:i:4227 NS:f:42.27
2: VBT43:00050:00287 2 NOTANAC|HIV 105 255 21M1D143M * 0 165 AGAAATTTGTACAGAAATGGAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGT >966-:>5>A?@??BA6?</55+56;7A=AAAA/CC:ABBBA0@;AB3:19>>><2>@7<<??>:ADCCC<@@?CCE9BBBBBBE:BCCCC1>8?G6A??9??@4@@8=7655+7:?====:;;0;=>;??4;;9?3;;6>;;;9<;;;:?>@@38888/;46: AS:i:7305 NS:f:73.05
2: VBT43:00051:00295 2 NOTANAC|HIV 10 255 114M * 0 114 CCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAGTAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG A;=?>;A>>>ABB???<AA9999,:;CC<CE>CC=BDCCCDCC=CB:BBB8CD=BD:BB<AC=C<BB>CCDCBB;@=:888,:<?@.A>>>:@ACAAAD5A@8???ABBAB9BA AS:i:5349 NS:f:53.49
2: VBT43:00053:00282 2 NOTANAC|HIV 186 255 20M6I43M * 0 63 CATAAAGAAAAAGGAAAGTAGTAGTGGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAG =A>A@:ACKGC/F<??9@BB@ABFMMCDDC:BABBBBFJ8B=BCCDBAAG<CC????8??<@;=@??2< AS:i:2192 NS:f:21.92
2: VBT43:00056:00270 2 NOTANAC|HIV 1 255 100M * 0 100 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCAT AB:B@:@@??8?BC=BCBBBBAABB;?B?=??4?;EB?CC<BB:?;?G@DCD>?>1776*9>/992:<7@B=B<AB?BBBBBB;@>9898+7;;;1>@@8 AS:i:4978 NS:f:49.78
2: VBT43:00061:00257 2 NOTANAC|HIV 387 255 69M * 0 69 ATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGG :9A9>?9@?@??BBBAA<<<9??8>AB??>BA;@@@8@C:??CB;:;@<=ABC<?????A;?9?A9999 AS:i:3511 NS:f:35.11
2: VBT43:00068:00271 2 NOTANAC|HIV 82 255 124M6I105M * 0 229 GAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAGAAAAA =@=DCECCC4CCDD9DCAB>DDCBBAB5::3:CBAABJD;BB<BAA6>7><A8@@@@1?B6>==>>->8?A8C=DCCCC8BF:A;A??:?BBBA<ABBBBC8BACD???7>>>??3><AA299>>AAA@A:>AA2;;7>==>=.=9>>==>?@A9B999BB;AB;B<CB<CBA@;>>>@965:B<@@AA;A<BB=EC>C<A@;A;AAB:?>>:::,:?AAA9=:::::*9999:* AS:i:9699 NS:f:96.99
2: VBT43:00086:00286 2 NOTANAC|HIV 770 255 146M * 0 146 TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAA 8;;BBD>BB<CEA>;;2::3:<DD>B<BF<AA<ADEBB@@@9@BB9>BB:AA;A=B=BCCB8B?:@<@@ABCCCCBBBB>CBCC6769=BB:ABBBBB;@?AC;??<@@AB<BAAB=BA=BABA;ABCBC<BAA??:>??9?@?@@ AS:i:6605 NS:f:66.05
2: VBT43:00063:00330 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ?A/9:,:::3:B=CIBAA::9,:1::@@CDCC@@@292:?@B;CBB@?8::: AS:i:2514 NS:f:25.14
2: VBT43:00092:00308 2 NOTANAC|HIV 1648 255 33M * 0 33 AAATTAGTCAGTGCTGGAATCAGGAGAGTACTA <@9B;BCJCBBBBBAAAA<BABD>@A@AA>@>9 AS:i:1499 NS:f:14.99
2: VBT43:00073:00350 2 NOTANAC|HIV 576 255 141M * 0 141 CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATG BB>AACA8??BC>DDDCBBCCA:>>><</?????:@;AABC@@?A;AACC>>>6=>4;;?GE/>>8>?>?>>==7=>>??BAAA*A@@>>>>D3AA9A9>>8<=8<;DD><8>AAA5>8?AAA9A??9?@@188;455/5= AS:i:6547 NS:f:65.47
2: VBT43:00077:00483 2 NOTANAC|HIV 15 255 121M * 0 121 TGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA >CCBCCBBBBE>A>?;;;3==BC<AB>CC<A;A@@@BC;@>7>>>1>>5?B:AA>BB<B>BB=CBCDBB?BAAAA</?<<</@AAB=CCCCAAA:AC;A?@@BBCA7@?0998(77>8@;> AS:i:5832 NS:f:58.32
2: VBT43:00078:00474 2 NOTANAC|HIV 393 255 157M * 0 157 CATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC BCBCC>EBCBFAAB:BC=CBAACCCF<@>>5>A<@=?C@@@@<A=<<5:889;?:>>CB@BB8@BB<BB;@=AB@=>:>>>@8B@@;@;@A9@AABBBBCCAA@@@.BBB=BBCBB:=??4?BBBC0CBBB;BB<BCCBAA>>>9AAA8>;;A;A@@ AS:i:7690 NS:f:76.90
2: VBT43:00055:00547 2 NOTANAC|HIV 622 255 92M1D32M1D38M1D30M * 0 195 CATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAATTAAATTGGGCAAGTCAGATTTATCCA ==?@?::3;A@FNNNN9;98;CBCBBBD=A==A@>;>>*;@?;@@=@4==8><@?9BB<C;BB>>8?AA?6=599:>7?>E:A>>8=?=87.7:1:::88=>956/8A@ABA?DAA@9=5555'8;=>@>>>9@?777=>7=@A>>>?@@;;3;B9?=666+7>2>8??5?8?H6@@9?@@>C888(7;;4: AS:i:7838 NS:f:78.38
2: VBT43:00060:00510 2 NOTANAC|HIV 430 255 85M * 0 85 TATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGGGCCTTTTA 8???C?????8?@@BBC=C=CCCEDD8ED=BA<A>BBBBC<???>8?9929<AA;AAACBA?;>:9988*:>>8?A@9A<B@@,: AS:i:4183 NS:f:41.83
2: VBT43:00092:00531 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA >>:@F<DED?BC:@?BBBBBB;BCCCCEBBCDCBB<A<A@AC;@@?A?<?>: AS:i:2417 NS:f:24.17
2: VBT43:00072:00550 2 NOTANAC|HIV 421 255 79M * 0 79 GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA BC9BB:??DCCGCBBBDA@;@>A>??9?;AACCC9CDE;BA8A;BCBAB<BB??:@AA:@:@@6A@AA;;:==76555' AS:i:4090 NS:f:40.90
2: VBT43:00059:00623 2 NOTANAC|HIV 832 255 92M * 0 92 CAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAGCTGGCAGAAAACAGGGA ?A<>388B@BBCBAA?>9?>?>3?;C<CC8ABBBB?:??:::?@?@@?A9??@@9>?6?@@@9@@BAD8>????AABG<@@::;;,;;;@3@ AS:i:4014 NS:f:40.14
2: VBT43:00081:00626 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BBAAA<AGD?CF>BCCECBCB9B<BAA@DAABBBB:=:=@A@9A?>?>8>>6 AS:i:2514 NS:f:25.14
2: VBT43:00084:00619 2 NOTANAC|HIV 1009 255 42M * 0 42 TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAA <D=CD@AABE??,99-:A??9?AA@;:::3:;@A8?>?999+ AS:i:2067 NS:f:20.67
2: VBT43:00085:00660 2 NOTANAC|HIV 840 255 123M * 0 123 TAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC AECCABB>D<::::+:1::@@:BCBBED>CEDE>BCBCBCC<ABBB=BC=BBBC>CCCCC>EDCBB;A::27?;;BC8;;;D;CCCC:83:::+:>6<9BB@BBBCC=C??B@::29:999:: AS:i:5660 NS:f:56.60
2: VBT43:00090:00698 2 NOTANAC|HIV 265 255 80M * 0 80 GAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATA CD<CC>DD=C<??>B=CCC?CC@9773:AE>C=CBBAA@@0@AABBC0CBCCCE=C@@ABBB?<?A@@?@9?@<>==<?7 AS:i:3746 NS:f:37.46
2: VBT43:00077:00700 2 NOTANAC|HIV 405 255 145M * 0 145 AAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC 6;2;;4:77>B?CB>BCC=EC=???>999=<=@@B:A?@999;@7@=@<?-:==6;?5<5<<;;;7>;;;9A@@:@9??6;;>??A;;;9<==='999(3864A:BFA.B@@@?*>>>>5552;79:@>?>D5>?@4????8<<7 AS:i:6934 NS:f:69.34
2: VBT43:00083:00736 2 NOTANAC|HIV 590 255 116M * 0 116 AGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCAT AADBE@@?=BBBBB4CBBCB=B<BBC=CBCB<=??@?9919A;ABBA:C=A<ABBBBCCC>DBA??><<<-<>>???EC8AA;B:@@:AA<A<BBCC;CC@@9@:?<=A;A@@:C@ AS:i:4913 NS:f:49.13
2: VBT43:00074:00791 2 NOTANAC|HIV 455 255 142M * 0 142 GATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGATATAATTATTTATCAATACGTGGATGATTTGTATGTAGAATCTGACTTAGAAATAGGGCAGCATAG 9:>;199,:;ABBBA=BCAB<CB@:@<AB<CCDHBCCCCA>>>>/@BB>BAAEA2:::+9>>@A9BGDE7GG<ECBBB9929:>==5?A@@;@ABBCF=??>???7??>AA@???=AAABCDG>CCCC<CCCB<BCCAAAC9 AS:i:6767 NS:f:67.67
2: VBT43:00092:00779 2 NOTANAC|HIV 343 255 214M * 0 214 TATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATG 29:ABB2DA;B=B;?EBHCCCCC<CBBB>CBD>I=BBCCABCBB>>=8>B=CBBB;>7999;:C9::7:ABBBBCBDEDD>;:6:CAABBBCCCCCC=CACB??:><DBAAB9CCA9??5@;@AA;;3;@@?9@@@:A;BB6A@@???BBAABC@?+755+5?@9>8>==,<=<=<*<ADD3995;...<<;=@5<==2;9?A9>>;B;;4;:9 AS:i:10077 NS:f:100.77
2: VBT43:00067:00804 2 NOTANAC|HIV 839 255 177M * 0 177 GTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACAT BCABBDBD>A8@???5?;B=BC>DD??@C=C@??>BBBAABC=BB>A:A@:?AA;8>>>>98<<../>AAA;C???@@/>??:1@:87247:::,:@9?;B@@@FBAB<BBAAC::3:@@9:::+9>?@A7BBCC<E<C@>>>BC9@@BA@==8=>>>:@@A@:@:@9@6A>:BA<> AS:i:7863 NS:f:78.63
2: VBT43:00092:00888 2 NOTANAC|HIV 739 255 69M * 0 69 CCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAG B=A>@@>A3AABIDCCE>CBBBBCC=BBDB>>>CCAB<@@;BBCAA5>>>/<8>B:B=BC:BC=CC=9= AS:i:3468 NS:f:34.68
2: VBT43:00067:00937 2 NOTANAC|HIV 497 255 129M * 0 129 AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC AC9B?>:?A@DD29::(:6666&6>AC:==>CCCCBBB?;48==4=@?@;BBBB@@8A@>88929?A@AB@A;AA@@@A?>8>BBC9AAED3@<>??@BAB9@@AAA,@@A@@9?:AA@A@@A@;@=B. AS:i:6129 NS:f:61.29
2: VBT43:00077:00922 2 NOTANAC|HIV 1631 255 50M * 0 50 GAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ;;A9BB>:@B49;DA=;99(/(/<//:BB???C>A1:9991:99<>>=>5 AS:i:2407 NS:f:24.07
2: VBT43:00086:00913 2 NOTANAC|HIV 911 255 87M * 0 87 CAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG <A:666(666:,9@>>8?AABB7BC:A;:;:CCAAA=ECCCBBB<B@?>>>>2>:@FD3AAEE<A6;;;;???;???DBBB<@@@A: AS:i:3995 NS:f:39.95
2: VBT43:00095:00911 2 NOTANAC|HIV 978 255 113M * 0 113 AGCAGAAGTACAGAAGCAGGAGCGAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATG BCBDCC=CCCBBBC?DDBB=BCCA?>383:;AC?KFCF@A???7??9AAAC>BBBC=BBB:B=AB<B??ACBB7B??9?AA5A??@97888+9BAC:?@BBCC8@@>??@9?? AS:i:5166 NS:f:51.66
2: VBT43:00055:01032 2 NOTANAC|HIV 168 255 70M * 0 70 CAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAA BB<AAABB>BBABBF<CDAB>>>:AFGFF4D>BB;ADE<AAA:@A;@AAA@4>;ABBAB:??9??><<=( AS:i:3058 NS:f:30.58
2: VBT43:00056:01041 2 NOTANAC|HIV 189 255 107M * 0 107 AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTCCAATTAGGAATACCACATCCCGCAG 55':2::3;CEEECCCEBBAC<BC<A????4?<???@?7993:?@@AB;A@;A;@?9??AB8@@<@165CC<BAAC9C=BBB=B@B=A?:?<BAA<A>==>B199BB AS:i:4415 NS:f:44.15
2: VBT43:00098:01003 2 NOTANAC|HIV 362 255 138M * 0 138 ACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA ;AAA:CBCB=BBB<BC=CCCCBBBB???8?D=ACBB=@@BB@??D<::;;CCDCCCC<CDD?EC>CCBBBABEECEDC=CBCCAA<A=BBBAA8A@D<AA7A;B@A>>8>AAA;@>>8>;AB6B=<>@@A?<8::;;, AS:i:6779 NS:f:67.79
2: VBT43:00056:01063 2 NOTANAC|HIV 305 255 40M1D152M * 0 193 AGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA <566666&6:>>?@:@DCBBBBB=BCB>>=4=>BBABC<?;=;3?C=C>C>CB=A@A77739??A?ACB;@;@A>>>B><;766+9G<BCCC>B9::??>A9::4:CCCDBBC=DDF>BA<ABBC???CCCCCC=BBBB9969;B@=>>5=@@7>>5><C@@@D8@<?@:A==7=7==2>AA>>>BDB8765 AS:i:9036 NS:f:90.36
2: VBT43:00083:01091 2 NOTANAC|HIV 517 255 142M * 0 142 AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAA ;;5=>:=7?B<BCCCBCCCD<A@?9BA??:@BCBDM@AB?:::,:@AAAB@?:????BCCC=CCDK?DCCC:BBCBBCCFD;:::::*:BB@B;A<AACCCE;:89A@??9918>9>:999+9>6<<>@???C;><>77788 AS:i:6601 NS:f:66.01
2: VBT43:00073:01128 2 NOTANAC|HIV 554 255 103M1D32M * 0 136 ATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGAT BAAABE:EBB@BACB>C:;;CAAC<BBCC<CCCB<AABCCABBB@DBBBB/BBCBC>C>CCC=BBBB?BCA??>@;@A<BCCDD8??:?A@A@AAA:@?<77777(9?@A@>>E6AA:@8@@;BA;A:>>@A9?= AS:i:5891 NS:f:58.91
2: VBT43:00084:01101 2 NOTANAC|HIV 954 255 105M1D7M1D90M * 0 204 TTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAATATGCAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAGAC D:@@BCDBD3CBBBD4BDDD=B<ABBBBBB<BBABBBB<AAAC=BDAA<A=D=B;AD;?ABBBBAAC;CE<A@@A<BCCC;BCC>B<BB<CAA9999)9>;.77(9=<=999:+9>@B=EACBBA9CBCBA@<@@?<;3777(9;8>;B<EEBB<@@A==<>>>>.>>>?:A:@@;;;;?@BAACC@@:>?:=@@/BD6@BA AS:i:8497 NS:f:84.97
2: VBT43:00086:01119 2 NOTANAC|HIV 243 255 104M * 0 104 TAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATT 7;;=3;B<ABAC=DDBB=CBABBC=BB<BC=D>CC<A<B>A<B@BBBE9BBC=C=CCBCBBA0>>>???0?AABCC=CCCBBB>>>AA?>>>7>A<=>?@BEE< AS:i:4844 NS:f:48.44
2: VBT43:00087:01101 2 NOTANAC|HIV 1645 255 36M * 0 36 GATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ??>BC<C<BAECBCCBDBB8=8=AAB=CBAAC@BB> AS:i:1659 NS:f:16.59
2: VBT43:00093:01114 2 NOTANAC|HIV 1 255 51M * 0 51 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT HB:BC?DCCC=CCB<AAAA@BBCBB;@C9988285=>8??;@@9?<99-:> AS:i:2472 NS:f:24.72
2: VBT43:00071:01154 2 NOTANAC|HIV 390 255 108M1D47M * 0 156 TACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA 3776<:78:>@@BCBBE<9869CCBBCBB<A@B:@A<A@BB?C@@;=;5414====A:@<AB???7?@@8??9?<CCCCD<BBBA<BCC=B=BB;B@@BBCBBA???>2?AA5B??8?8>??,:;;;:):?@?9AA9??B@??A==5??A299@A AS:i:6954 NS:f:69.54
2: VBT43:00098:01157 2 NOTANAC|HIV 1 255 43M * 0 43 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAG EC9AA<BCEC=FBB<BBBCDFDFFC>CCCCCC8B=BB:??=BB AS:i:2047 NS:f:20.47
2: VBT43:00077:01225 2 NOTANAC|HIV 706 255 214M * 0 214 CCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACA C<BAAAAB<BB>BBBB??BBEC>DFGCCABBBBC<BAEFCC.>>BBAB?A8A>>>@BB;@DEDA@ACAAA9@@:?@<:9:+56+5:DE6A9>>2<<5=<=<9455+7??3AAE5@@9@B6@?@AA/>>9>9@?:::AA@@>>A8@???+4/46>D5><<@@@9?>??9@@A>>>A9<<:D9@@8AAA@244A<<6=>=;;6;;;8>>7778+8? AS:i:9984 NS:f:99.84
2: VBT43:00069:01271 2 NOTANAC|HIV 909 255 56M2D76M * 0 134 GGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATAGAGCGTATTATGACCCACAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGA C=AB====3=??B<D>?<:>9699+:>8?>EDEBAA@ABACCAA=81797:::,98::,4<<=<@<BBBDDDC?DBBBBBD@@@@?8?ADA;D;A<A=BB=BBCDBBA@@7?<4;;>=5=?990999+9:?@ AS:i:5545 NS:f:55.45
2: VBT43:00076:01276 2 NOTANAC|HIV 1 255 126M * 0 126 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATGAAAGCATTAGTAGAAATTTGTACAGAAATGGAA CG;CB=CCCC=BBE?BBBBCBCCB@9<95555*99AA:BB<AA:A=BBFDBB>BB:IEE8BC=BC<BA<ANAC>CC<A:::A@:>>7999/9?@D9CCA@7?;672AA6CC:AABCCBBE9>>098 AS:i:5927 NS:f:59.27
2: VBT43:00083:01281 2 NOTANAC|HIV 1 255 125M1D11M * 0 137 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAA >>5>@:@AE?8>@C<CCBAABDAAC<CA9887'74;:6:81;=7=7>?4@>>8:8+677'7>2:;/>><?@9>6>@=CCCCCB<==9999+9>>?2ABBC=CGCC?==4=>6?BAACCBB7==.88(54;5;6=<< AS:i:6253 NS:f:62.53
2: VBT43:00075:01347 2 NOTANAC|HIV 3 255 146M * 0 146 CATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA @BA<BADB>CBC=CCCCBABAAA<>::;;;,;9AA9@B<??:?=CC;@AE?CC=EDC5A?7>>,:::::2;9@?;BCCCCD=CB::::+:>>@5@AAA<ABDE@BB7??7?BBBCBCC9>>1888*85<6?=BDBB3>=19::::* AS:i:7206 NS:f:72.06
2: VBT43:00081:01302 2 NOTANAC|HIV 851 255 135M * 0 135 GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG AAC8B<B>BG<CCCBAA>ABBB=???AACC=BBBB<A=;=@?><>@@@@8??>>>8AAA;AA@@BA/@@@@5@?AA4:;?AA5?@:?9??@@EBAB<BCCCDBC;@?>7999+9??@A7A@BC:A;A@@@A@@9@ AS:i:6103 NS:f:61.03
2: VBT43:00085:01305 2 NOTANAC|HIV 43 255 108M1I40M * 0 148 GGAATGGGTGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTAGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAA ?;A<BBB<BC>CD9A>A7A?8AE?BC>CH=C<BB=BACBA<5844444)9>AA1A???8;AABABA8CE<HCCCCBAA9>>1999*89?;A=DD<B>>>8>CCCC1C399A7A9@C@BC4AC9CK<<<8//.8:548:88=4=??@>AD AS:i:6647 NS:f:66.47
2: VBT43:00078:01350 2 NOTANAC|HIV 61 255 45M * 0 45 GTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTA 9>/:5*5:7?A?D>:;3976>>?9C?BBAA4A@BB7@A@A:@::9 AS:i:2221 NS:f:22.21
2: VBT43:00080:01356 2 NOTANAC|HIV 251 255 156M * 0 156 CTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA AA?D>DDC@<CCDE=C=@>;?F=B:=><C?BBB8=?BBCB:?>>A?9?@AA???)@@@@AA-@>====9=@A=@>>?8ACA>882<???@@><88888*8@9:4<422/4<<<??5>DAA:@@@484<A??@?<;;499,:G;BBBCAD:::?:;; AS:i:7444 NS:f:74.44
2: VBT43:00086:01351 2 NOTANAC|HIV 494 255 20M1I60M * 0 80 CAAAAATCTTAGAGCCTTTTAAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCT @>>>>/ABC=DCBEE9>>>)666669$6<<<6AA>BAAAAAAA>;@BD7B@@@9@@C@@@::>9<<;2<@@AAA@B;@899 AS:i:3280 NS:f:32.80
2: VBT43:00096:01363 2 NOTANAC|HIV 300 255 131M * 0 131 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT @?<;;):9::::)9?@CCD@DHCBBBAB>BBA???7?BBAACCCBAA?A3BC=B>C<994:AABBD;BBEE>C??:?<AA@@@AA@A:992:@;BCCF=C9::?:::-::2:ACCCFCC=CBC:CD>BBBC AS:i:6284 NS:f:62.84
2: VBT43:00087:01578 2 NOTANAC|HIV 273 255 72M1D145M * 0 218 ATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA ?=8AA395:CD=BBB@BB<CBADC:?996666&:>999<+;CCB=>;?BB>BAAA=AA@77729AAA@AB;3333(3C9B;C;@?9>;:777/9=?>6<:53:6==>>?><=<8::2:D<BEDC@DCDBCAAC9::3:??ABAAB?AAA:AA:ABBDACBCAAABF>ABA@97198??ACG8@=?087/78B@A>?9?DA@8?8838389/988222 AS:i:10191 NS:f:101.91
2: VBT43:00059:01626 2 NOTANAC|HIV 300 255 201M1D16M * 0 218 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTAGAACCTTTTAAAA BBCBB+@@@BBB0B99:DCBCBBCCB@B=ECBAAA:ACBCA>=595559*:A<C<C>;;8:EAABB;CBBC<AAB=B:??ABBDA@?988+9=9@BBB=B9::@>>>5;:2:BACBBBBAMNN@D?<@CCEABBB99:@A:>::9??:@<BFFEE8ABC<CB:B;@??>>7>??>7?>>8>:@G6B@?@A?@???BKEF,;;3;@@9:2::<,<=== AS:i:10118 NS:f:101.18
2: VBT43:00078:01624 2 NOTANAC|HIV 558 255 74M * 0 74 TTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGA @A4ADCB@?AD@CBCCCC?@9?CCC<EFFE<CCCCBCBCD>CCCCB3AACCB<A;ACC>@?AA:?@@@@;;4;; AS:i:3672 NS:f:36.72
2: VBT43:00095:01600 2 NOTANAC|HIV 232 255 113M1D40M1I24M * 0 178 AGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGACATTTACCATACCTAGTATAAACA BBBBG@FF<A;@?7<>A>;ABCC=CCBB<ACBC?B:A@:AA<C<CC4619AC<D@=@AA6?8@?B9B??EEFE0CCJCBB0BA@@??8?@>@@@BC<BBBBAA5>;=:;;=>8588*5>697>97937BBACD9@@??:AFE9@8>?C>>99...;@A5CA;988C<C?@?>=;;179 AS:i:7486 NS:f:74.86
2: VBT43:00053:01704 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BB:>>8>?>;BE=CBE8>877177>@@9:::BBAC9?9?AAA<BCCBBAD@: AS:i:2386 NS:f:23.86
2: VBT43:00083:01743 2 NOTANAC|HIV 438 255 61M * 0 61 CAATGTGCTTCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAA 972:9<A::39<BD???4>></99)45<;@AC<@;884:BA<F;@A6778@;;>@@==>>/ AS:i:3112 NS:f:31.12
2: VBT43:00061:01797 2 NOTANAC|HIV 202 255 77M * 0 77 AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGG BCCG8:::+9?9>5555(8;>?<??9::-;BB:::>AA:A<??9?@?C<C@A@:=>::2:?>>6@9::29D2:/9?1 AS:i:3678 NS:f:36.78
2: VBT43:00089:01765 2 NOTANAC|HIV 419 255 139M1D45M1D26M * 0 212 CAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACATCTATTG ABBB<CB@BB??9::CBCCDD>FDBCBC=B:??AAA9>@@19927;ABA@C<?AAA;BAA:@9@A6@@@@@@ABB??@@?,???9?97772788+9::<?*?;;;2;A:CA@@@@@@@8::8/9:=?7?A@@AA;AA?77/8@::;>=?6=788=@;;3;>==0=878(7:9:A???A:>=>>.>??98.5.6>?=>>?A:>>>@;995- AS:i:9450 NS:f:94.50
2: VBT43:00065:01835 2 NOTANAC|HIV 396 255 41M * 0 41 ACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGT 7?8?>??B@;>9::4:?BA:::?9?EE=FF@>??B:::@99 AS:i:2094 NS:f:20.94
2: VBT43:00080:01832 2 NOTANAC|HIV 1 255 83M * 0 83 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA BB9??8?C@A;???9:::@??BBA@8?>>>>>1>7::199=BD?C=CCCB?>199+:::+:>9?C<CC=AA<A:AC;@?::4; AS:i:4011 NS:f:40.11
2: VBT43:00081:01825 2 NOTANAC|HIV 470 255 134M1D20M * 0 155 CAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACAT >B@772:?@<C=BF?FCBCBBBB>99999*:@A4ACC;@;?EE7BECBB0FCCC;@@9@:::EAB>>8?@A:AEHH>BEDF@@9>>?:99,:>@@@@:;2:??>BA::29>??5?;::,:>>???FCC=CCCC8BCB::3:<AAAEAB>>7@@< AS:i:6854 NS:f:68.54
2: VBT43:00052:01852 2 NOTANAC|HIV 1 255 184M * 0 184 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG :>4AD<BBDD>CBB;BAB@@BBBCC9<;5555*85<<:@B;AC=D=A@;AA@:?A,:99+:?;BD=EE=AA;A8??9?BBFCC=BC????5?CEE8GD??9?C@>>>>*99+:AAAFCCB:BA2:::+:9@;B>DFDC3BB;CCEEE3C9?>4=4<<=??2@A7AA>>>7>@@>?9BB9656+6 AS:i:8956 NS:f:89.56
2: VBT43:00054:01870 2 NOTANAC|HIV 883 255 31M * 0 31 CTAACAAGAGAAGCAGAACTAGAACTGGCAG 5551:A;A<??=BBABB<BB?::3:@?49<5 AS:i:1308 NS:f:13.08
2: VBT43:00059:01889 2 NOTANAC|HIV 1040 255 116M * 0 116 AGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG 9::2::>>>??1=9=1:55(6=B@:;:::*;@::1:@@@@@9AAABBB<A@BA;::::,:>6?:A<CCBB<BFCCCEECDD7CBBB=E=ABBBBB;ABBCDCCB>BCFCCC8CC<C AS:i:5478 NS:f:54.78
2: VBT43:00061:01851 2 NOTANAC|HIV 1630 255 51M * 0 51 GGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA >/:9*9:@:>?9?BB=CBCE<E;@?BABBBBCCC=A:@>75/9@A>>>C@B AS:i:2333 NS:f:23.33
2: VBT43:00076:01869 2 NOTANAC|HIV 43 255 100M * 0 100 GGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTT 5/5/6>7>@@9@@-:::(6>4>=46829D=EA::6:???BB<BBAAAA1BB@?1?>::16;6999:*:>5?CCAC??>4>A2:::+:6>6>6>>>>->>9 AS:i:4879 NS:f:48.79
2: VBT43:00076:01886 2 NOTANAC|HIV 726 255 57M * 0 57 GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGT 799?@?ACABEC?=8>::999*:??@AABB<CCCCCBB;A>>?A@BA@@?8981/=: AS:i:2805 NS:f:28.05
2: VBT43:00081:01896 2 NOTANAC|HIV 238 255 74M1D48M * 0 123 CTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTA BB<B<AB<BCB>9BA9518?9:37@B@BC=AA:AA9?6?@2929??8>CCBBB;CCCBA6A::::::);;;;;*6=@9:6/7A?;=ACC=BBB@@@9@???ACC@@>CCC1BB<C?C=CB<@ AS:i:5361 NS:f:53.61
2: VBT43:00055:01942 2 NOTANAC|HIV 478 255 182M * 0 182 TTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA =:?=BB:AABBBB><<66666*;AA5DCC>D9???,:::::&9>AA:CD>CDBACBDDD<AAB<BBBB=BABBBB>BAAAAA:ABBC?>CD?C899CDDD=BBBF<DBAA;BBBBBBBBB899889/9BBCC>D=BBBA@AAA;BBA>>;?9?;5>>>;>1<=6=A@@BBBB;B??ABDDDD AS:i:8367 NS:f:83.67
2: VBT43:00063:01947 2 NOTANAC|HIV 339 255 190M * 0 190 TGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCA <CA><66669(6B<C=K>??9?@A<@@:?BBB?CBB<B<BABBCDAAAA?>9>>:ACAA;?>A?9::?6::2:@@ADCCE<EBD>CC=ACCDAAACCBCCB?BCBC@@;@<CDAAB8@AA7>>5><@@@<@:@?@?:A;;6;:@@6???@@@BB@>=<;;*;@A9A??8848B@-@?@BE*@766+5907 AS:i:9120 NS:f:91.20
2: VBT43:00078:01905 2 NOTANAC|HIV 625 255 168M * 0 168 CTGTTAAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGATAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTA B@AB9?7=:9666(9?;2@BBB@@@7;:=955599):>>>>;;;3?BBC<BB=BC<B<BB<B=BBCC<B;C@@@<@AA<BBB=B@A:::4;D<CCEFBBCBCD>BBCDDECDBAB=C@?99929@@?@ABC:A@>>=>@:DCC??@@>>;>8?>9==5667':>4>:@ AS:i:7631 NS:f:76.31
2: VBT43:00085:01949 2 NOTANAC|HIV 382 255 116M1D105M1D19M * 0 242 ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACA BABACBBB8BC<CBBB>A@AB?@?D<:96:AAADCCC>BEC<CC=ADBDBCCBBBBCB?BABABB<B;>?@@@5@BB:A@8>:A<88>;A@@@9@=<5<7<<2>AA>>?B??7876'4;>8>:B8848AD/BABAA*?765/5?8@@@@@@@CB:;;:28=@A9@@AA@@8>89544+5>:<=>=>7>;;;?@@?8?777(7777+7@@AA>>>D9??BB/A@A;;5;:@????;;;8>? AS:i:10982 NS:f:109.82
2: VBT43:00095:01931 2 NOTANAC|HIV 626 255 160M * 0 160 TATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG 8??>BB=BBCB;ABF?CCAAABBB=CBABBBBBA+A@@@@BBC:B?:=:@B<CC=B=DBBB=CCCC<B;??@A<ABB;ACE<EA@=>>47:4><===:>:=>;CCDFFC????>7>BBAAB1>>>@A==@;A=?>???9??@A<=<AAAD9@@9?8999( AS:i:7127 NS:f:71.27
2: VBT43:00098:01928 2 NOTANAC|HIV 173 255 33M6I99M * 0 132 CTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAA BBB<@@BBBB:BBBAABJ<CCCCB/A8??7?ABBBBBAA;@BB;BB=<;;;*/-4::>BDBCB<BDC???:??9?<AC=BBCC=BBBA=BAAA<AAAABD=BC=CC=C>DC?C<BBB<CBBBCG9@@889)9>??@BB AS:i:5357 NS:f:53.57
2: VBT43:00053:01968 2 NOTANAC|HIV 599 255 112M * 0 112 CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGA BBBBC4BBBBB:>:?BBCBCAA<ABBCBAB>CB<AABBB89937B@?@C@@;@@?@E@@@C-A>=577;B6BA:@9?@<CC;B9@A@@8>???3?8;;;@;A?>8?AB:@75 AS:i:5093 NS:f:50.93
2: VBT43:00066:01963 2 NOTANAC|HIV 19 255 68M1D40M * 0 109 ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA ?@AABBB?::;BBB1A;9:5:D9BB>C=BB<DCI>DG4:;:,:A;AB;CF>DC=B6::?DCCCCC?:::::*::::,:CEB;?@?A@>A+992:?>A@:::,:>2::3 AS:i:4990 NS:f:49.90
2: VBT43:00081:01994 2 NOTANAC|HIV 272 255 73M1D76M * 0 150 AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAG 72:9@>9?9??B8@@ACBB<BBACD<C99::::&:>999<+;AAA??9?@?ABCBB=A;;777/9BABAAA;3333(3<7A:C:@@9@<=77729???8?>;/706>@A@?>??9::3:D>BBBC>FBBBB@?C9::5:DDCCC@@:?@ AS:i:6684 NS:f:66.84
2: VBT43:00051:02023 2 NOTANAC|HIV 858 255 53M * 0 53 CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGG 777195A?=>;?BBB<CCCBBBD>CCAB;A=9?BA?<?>>>@:A???@:B@?8 AS:i:2353 NS:f:23.53
2: VBT43:00066:02013 2 NOTANAC|HIV 1 255 89M1D39M2D21M * 0 152 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAATTTCAAAAATTGG CF=BB=BCCB?BAA<ADAAABBBCB;@=;;;;/<4?@;AA<AB=C>CC=BBC:>>,:::+:D9?A7??9?>8@:@@?EELLFD?EC:::,8???5BCBE>DCBCCDD8>>5>@@@AAA@7?B199378D8B/777'7=09>?@@1?:A7 AS:i:6162 NS:f:61.62
2: VBT43:00075:02041 2 NOTANAC|HIV 891 255 131M * 0 131 AGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAA BBA<CEBCC>CCECC=CCB<DA:999+:>>?6@B@@9>>>>>1=?;B<B@?>DDCE@;::CC??9???9999+9:<<=/?BFE=C=FC:=;DB<CAABBBE<BBAB:@@@@9@:B:A:BD<B>>8;8111+ AS:i:6019 NS:f:60.19
2: VBT43:00080:02033 2 NOTANAC|HIV 445 255 53M1D105M1D30M * 0 190 CTTCCACAGGGATGGAGAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACATCTATTGAAGT AB=C=BBBDD@DCC<@CBB>BCA@A?CBBB=BBB=C=CC;CBBBCBA?>8888*9>>8@@??@5;;;/<>>>>->>>>4>@9@@AC@@@@@:@@@5>>>D8@9?:AD9<89555(7==::;;;2:???ADLFAFFFG>DC=C=CCEDFDCEC=BBCC8CEB::6:=CBCCAA@>7?A?==9919><@? AS:i:8045 NS:f:80.45
2: VBT43:00084:02011 2 NOTANAC|HIV 346 255 158M * 0 158 TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGAACAAAATCTT 999*6?<A<C9895:@B@AB:CCB?<BCB9?9?BAAAB@@@:99+:B;:;:B<B????@=A7//+/>>AAAAG>DCCBCB<CBABACDBCCBA@3::???B<B=B@???5>AA2::-:;@ABBB>CCAB;>==7=<AA:CBBA@?=8919===1:;>7 AS:i:7372 NS:f:73.72
2: VBT43:00086:02038 2 NOTANAC|HIV 618 255 129M1D35M * 0 165 AGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTTAATGACATACAGAAGTTAGT BBC=BBBBAAB=CI9@9999+:A<CBC??@BB=B@@A@@@@A0ACDCDBBD:::5:<AA=BC?B<BBBB:AAEE;B<BABB;DCD=CAA;AABBCD<CC=CDCDDCCCCC=;:;BB@@ACBB=AAABB8BBAA????7<<@@A<B<AAAAAABBBAA=CC<AA? AS:i:7136 NS:f:71.36
2: VBT43:00075:02096 2 NOTANAC|HIV 403 255 88M * 0 88 ATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA @><B68829A>=>@99/:::,5>5?ACCBA;;:=?AA>CGEBBA>C=BBAAD;BAB37737;ACCBC<@@9919?=6=9>>4><<<>8 AS:i:4533 NS:f:45.33
2: VBT43:00077:02099 2 NOTANAC|HIV 449 255 109M1D45M * 0 155 CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA 779??<0>>B2:93:2:6:??9??@@<:::=C=CF>BCCCCCCBBBCFCC3CBB8BAB<B>CCA+:::::):>>?7?C>CFFBBBBCB;@@G;CCCD>H;;:CC=ACC::3:@?=>=::2:::9::::9??>?7>AAB;CCBFGAA>=65565( AS:i:6981 NS:f:69.81
2: VBT43:00097:02073 2 NOTANAC|HIV 11 255 73M * 0 73 CTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA BC??9?B??@CCBDB;AAAACC8H?DC=CC>CC=F=??:?A@6>;*6::(6A;BC5777;?6?<BB>CABBCB AS:i:3656 NS:f:36.56
2: VBT43:00099:02118 2 NOTANAC|HIV 685 255 62M1D23M * 0 86 TGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACAT CC>BBDE>C=BB?=9@BA:@??8>@A:::4;@8?EB@A???::29@CBBBBA???8>@??@399B@@A@?8??:::@@<???AB8 AS:i:3681 NS:f:36.81
2: VBT43:00109:00068 2 NOTANAC|HIV 102 255 34M1D72M * 0 107 AGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA AA=<666,9:,:@@:::BA4BB1999+919191999/9@7AABAB3?8=>7>8>9999+9A7A29:?9?AACC=CCB@??9?AAABCB999999*91:9,:CACCB AS:i:4154 NS:f:41.54
2: VBT43:00111:00062 2 NOTANAC|HIV 1629 255 19M1I33M * 0 52 AGGGAATGAACAAGTAGATAAAATTAGTCAGTACTAGAATCAGGAGAGTACTA >>>4<8?>;7<>7>@=<<9555+89AACBDCCCBAAAB<@@AC=DBBBB988. AS:i:1847 NS:f:18.47
2: VBT43:00119:00068 2 NOTANAC|HIV 189 255 39M1D94M * 0 134 AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCGGGGCTAAAAAAGAAAAAATCAGTAACAG 96*:1::*8AACGCB@>7899,:A;@::::+:;ECA;=//)/:7C<>8A>8?:AB<ABCC=BCCB<B@::2:??==?;>>89:29<AA;A<@@@:@@896;3955@C.>??ABBB-AABB@@(88:9?=7;>: AS:i:5159 NS:f:51.59
2: VBT43:00122:00075 2 NOTANAC|HIV 745 255 130M * 0 130 AAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAG CC;CCBEBBDB>EBBBBCA=CBB@BABBAA?=AA;?>A@<<+44/77>@8B<?A5@B<BCB>??::1:??:ADD3>A=C=C<@@??/?>8?:@>?@@@?=>>77.7114'54<8?C5@A?>>A:ABAA:@ AS:i:6032 NS:f:60.32
2: VBT43:00128:00076 2 NOTANAC|HIV 20 255 179M * 0 179 CTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG BA@AAE>BC6666(68=@;@B<@A;A;AA=CCC=CD9?==/991:B:BD>AA<B=CC=CCAA??>>19999*9>AA7CCBB<@DD@BBE;CC<CBBAAACA6AB2::9*99>:A>CGCC3BA9?????2@=CB<B<;??==1>>5>?>??:9:8CC<CCC@@?8;;:@477)78999(8 AS:i:8650 NS:f:86.50
2: VBT43:00133:00059 2 NOTANAC|HIV 136 255 70M6I76M * 0 146 AAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAAGAAT 555*7>:BEIII4C<BB:@:@::::*:B7??DCC=GCCBB<CBBBBB;ABB@@@B9AAAAA3A=BB;AABBBCCCB;@@?6>=8>9999):;DEECC::9+9AB@BC=CC=D;@B>ABBD<BCCA<@>FD>DCCE<E<BCACE<B;A<?>8? AS:i:6228 NS:f:62.28
2: VBT43:00134:00059 2 NOTANAC|HIV 359 255 126M * 0 126 TAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACGATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAA 7??BAAA:A@@B<BBA3739ABBBDCAA?==7?=<BAAA=B9::CDDD=AA;AAABC:99<A:A<BB<BA@A9::@B@AABA=@AB?B<B<@BCCC9???-55/56?ACCB<B=9909999>:??9 AS:i:6005 NS:f:60.05
2: VBT43:00141:00144 2 NOTANAC|HIV 598 255 106M * 0 106 ACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCC 77BBBB/ABAHB=B>BACECCCB=CA@@>>A<AB<BDCCC7AA<ACBBBBBC;>@>?>>>>>-:<<687==2??9?9@@6>><C7;;882;888/:9@>>@:;;;9 AS:i:4754 NS:f:47.54
2: VBT43:00104:00161 2 NOTANAC|HIV 468 255 205M * 0 205 ACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGAGAACATCTGTTGAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAA @>8<<7:2:@D<B?MG?BFC@ACA@@:::::*:AA<DFFCC?EDD7CCELL7@@@?5?A<@??BBBCAA:???:DDDD@FBCCCD>CAAACE<CCCCCBBC=BBBCBBBC=DCDFBDEE>CCCCBAABDC<BAFFC4BB???3:3:C@>??7917@@@@@?:@A?9AEEG3AAB<CCC>>>E<AAAACCEED-A??@@;;;-::: AS:i:9783 NS:f:97.83
2: VBT43:00106:00182 2 NOTANAC|HIV 1628 255 45M * 0 45 GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGA CBBC<F@FCB<EE@EEDABCDD<C?CCBCC;;:@@@8?8>;?>8@ AS:i:2175 NS:f:21.75
2: VBT43:00113:00153 2 NOTANAC|HIV 1009 255 73M1D68M * 0 142 TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCCACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGG :?8=BB>?????9?D<CCCB>B>><7995+86>>6?=9:<<?5A@B<FBC7BAAA>??@?1@@@@:@EGCCCE4BB@>8>?BB;9888):@;B?F>CCEC=BCBAABBBBB7AA@A;B68:DCCC9@???@@@@<>?>CG: AS:i:6331 NS:f:63.31
2: VBT43:00116:00189 2 NOTANAC|HIV 564 255 116M * 0 116 TGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCAT <ABAA<CDDDBACB=AAAE>EBCB:BB??ABECC>AAB@@1@@:9:=C=BECBBCA@9ABB===@7>?9@ABAD3?=3447?@AAF<CB@BAAAAD-A?::;@@?3>?8=6<<3>> AS:i:5544 NS:f:55.44
2: VBT43:00118:00165 2 NOTANAC|HIV 283 255 62M1D70M * 0 133 CCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGA @:>BB?><7>A::6-;?>>>>?->ACDCF0CAAA??9?AA?@@@@9>=<999)9>=??@@=8444(9>6>:A=CC<CEBBBA5@A;;6;AC9?9??;;;BB???CD6@@9??AD9@:;;>?=?27.(-76:. AS:i:5782 NS:f:57.82
2: VBT43:00134:00239 2 NOTANAC|HIV 902 255 209M * 0 209 TAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAA 27@B>CA?>BBBBDB3B>==8?BBB=BBBBB4AA<B<B@@CDCFD>BDBCCBB=CCBABBB599ABB5CBBC=B<B;>?CCB<AAABBCC<A@@A;AD;;6;9?9?9BB?DG996>9;:/:=2==>A;?@9<6<<=1;69A<<877DEF/:997=CC-...B99;;;+9?@@;BAA>>>5=995BC:==AA99877(9>:>:A;ACBCC AS:i:9792 NS:f:97.92
2: VBT43:00138:00245 2 NOTANAC|HIV 1 255 39M * 0 39 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG ?A7=>:>@A>18=@9>=>@B989CB:A?8577'78@?9? AS:i:1832 NS:f:18.32
2: VBT43:00142:00224 2 NOTANAC|HIV 1 255 59M * 0 59 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAA AD=BB<BAAA;99:<BB?:;:??@A9??BCDD7B<AA:?@>CC=E<@@9?A@9>>)/// AS:i:2890 NS:f:28.90
2: VBT43:00105:00289 2 NOTANAC|HIV 272 255 114M1I38M * 0 152 AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGACATTTACCATACCTAGTATAAACAATGAGACACCAGGG =9=:@@=D?DDB>AAABBB<CB??=8?JKNKGK0BFCBCC0?;ABB@:@A@@@BBCAA>@>CC?BAA@57:@:::::*:A2:1:;B>;BBAABE=BAA@<A@A<@B;A>99<..////9/=?:AABB<BA@@:99>4<<6<>D899BD<FCA4 AS:i:6586 NS:f:65.86
2: VBT43:00108:00260 2 NOTANAC|HIV 143 255 63M6I87M1I21M * 0 171 CAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGACAGGGCTAAAAAAGAAAAAAT BBBBC4B<CB<C=C=;;;4<<4@ABAB=DBEDB@BBBAAA<ABBBBBB<BAAAA/@<@A:BAA>>>@@@8>??5B?8<::::,>9B???C??=8?CBBBB=BB=C<BA;AABF8B@A?<AACC<ABAD;C=BC?CH<C<BB<A<DBB;B@@::9--..:89/;@@@@@F*?>>;@@-> AS:i:7081 NS:f:70.81
2: VBT43:00114:00297 2 NOTANAC|HIV 306 255 146M1I40M * 0 186 GAAAAAATCAGTAACAGTACTGGATGTGGGAGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCAT CABBBE0BA?>795:DDCBDBD>DE@@;:.//<<;;;DAAAAA/BC<B=B<@A:=;ABBB<CBBD=BBB=D=DBCBCCAAAAAA:BC<BBCB=BABB???D<996:BBBCCCC=CEE>999:CCA9:9@???AA9??CCAA<?9@9909>1>?@9@C7?8;;7777???G<F@?9@;BB6776@@>< AS:i:8695 NS:f:86.95
2: VBT43:00120:00290 2 NOTANAC|HIV 632 255 153M * 0 153 GGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGG C=CCCC8A@@9ACCAAA>8>???CCCCD0CCCBAABB:CC=B:;;79938;AABB:AACC8A<A889<CCC=BBB9>?@97717B<CBBAB?@@@@6??ABCC>@ABB:>88888)9?>?@@@@:@@@@@@@:@@?BAAAABBB<BB?FCCC= AS:i:7196 NS:f:71.96
2: VBT43:00142:00289 2 NOTANAC|HIV 658 255 89M1D25M * 0 115 AAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATAC AA9CAACB?CC<BB=F>CB<CD=B=B@AA<AAAD;B<BBBB=CEG>BAA6::BCKF<DD@GCCBBBB::9277@AABAA;::9:::>>1:>=A??@B>CA??>>>4:665:555 AS:i:5065 NS:f:50.65
2: VBT43:00145:00269 2 NOTANAC|HIV 380 255 189M * 0 189 ATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATATGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAG @>BCBB@BBC:AA;@@@<<>7;;BBBB;@@:?BBBACBB=CBBCBD@AABBAA@BB??@@8BBAB@@<@;CC@AA9AGD:??8>:>>?::6;8881???:A=DC=CCAAABBABCECCA3BBB>CCBCB=CCA+:::::(:@AA9AA<AACCCBA@B;BBH8>?@A;AAEECC<CA>999*9:>;89// AS:i:9057 NS:f:90.57
2: VBT43:00116:00302 2 NOTANAC|HIV 212 255 169M * 0 169 GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTA C;@?<<<5<7BAAA????:?ACCA@<@B<B>BB<ABA@:@?>@9@CCC=AA@C9D?DD=BB=B;BB;A;A??:@CBCCD;B???@7@BBCCCC0CCFEEE0AABCCC=BBBBBBBD>BCB??>1>>===>>>;>>>?1@A<C;@;@D<CC@@??8?ACC<ABC;?9??> AS:i:8149 NS:f:81.49
2: VBT43:00117:00317 2 NOTANAC|HIV 940 255 128M * 0 128 GTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAA ABACCBB<BEBCBBB899AABBB8BBFEE8CCAA;A=@@@CBBB<CBBA@@A;A8995:AAA8>9?:D9AA;BBAA>?<;;+44+4==?:@@@E9?>@6@9@@8?EFAAAA.9870777+8899?=>> AS:i:5873 NS:f:58.73
2: VBT43:00111:00367 2 NOTANAC|HIV 449 255 196M1D14M * 0 211 CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATCTACACACCAGACAAAAA A>CCC@6>>>7<<7=9>A:88<CBBC<BCB;?:BG:BAEBBAA?==<<?=0?AC=D???B9???1?@@@A0BAAC9;:5;CCAAA?><5:99,999:2:>@>:926???@D:9::CBACC>A:::AADE?DDDK=EE>B<AAABBFFEE>?????->>??@;@<AAA@CA9919??999=.796=>>9?9977>>6:>>>6>9666DDE, AS:i:9373 NS:f:93.73
2: VBT43:00111:00544 2 NOTANAC|HIV 1 255 54M * 0 54 CCCATTAGTCCTACTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGC @?9?A<CAAA;A???C??9::::?A<?9;;GG8D<BA>BB<AB<A;@B:@AA2: AS:i:2497 NS:f:24.97
2: VBT43:00117:00523 2 NOTANAC|HIV 432 255 150M * 0 150 TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGA >CCAA@@A>BCAA??;=:@@>>@8@BA9AA:?<CC@@@?B@@>:===8@8AA9@@@>@>?>>>DD@A+9992:@A;B=CCC9BFMKF0KDCC;BB>DDCCCBAAC;BBC;BACC:@?BCCC=BBA99938A@@AACC>CCA@ACBB@BCD AS:i:7229 NS:f:72.29
2: VBT43:00124:00503 2 NOTANAC|HIV 744 255 42M1D54M * 0 97 AAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT 666,::?AAAAC?B?AAACC=CCCCBBBBCBB<AC;AA?@A/77)84<<4;8>G6AC<AB;;;@?@34668>DD3;@>C<D<CADE4A@:@;A@AB AS:i:4215 NS:f:42.15
2: VBT43:00124:00512 2 NOTANAC|HIV 437 255 25M * 0 25 ACAATGTGCTTCCACAGGGATGGAA ::72696:>?9?:A@???49733:: AS:i:1318 NS:f:13.18
2: VBT43:00106:00591 2 NOTANAC|HIV 81 255 125M6I36M * 0 161 AGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCCGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTA DBD>BDBBBA3>>>>7A@BB=BBDDGDD4DD<BCA??@@B9@A:@@@2@8?8>:AAAB1BC9CBAAA1B<AA9FD9::::+9>4@@ABB<BBCBE<@??>==5=@A@@A@6=====-;9??9@A?A>>>>><CCC:BB<BAABB/>7==778=@A9???@>>6>>7> AS:i:6743 NS:f:67.43
2: VBT43:00133:00591 2 NOTANAC|HIV 1628 255 53M * 0 53 GAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA DCB8>>9?B><CE>CC@AAA>>9><@@AABCCCB@@<@<AB@@8@@@A@8@;9 AS:i:2568 NS:f:25.68
2: VBT43:00141:00563 2 NOTANAC|HIV 332 255 75M * 0 75 TGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA >CC:ACGAB?@599999*:G9?8B:??:@?BBA@9:::>6>@@;B357===;5::=@B9@>8665>8D755@>?? AS:i:3399 NS:f:33.99
2: VBT43:00103:00637 2 NOTANAC|HIV 16 255 156M * 0 156 GACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAAT CCCJDEE???<BBBBBA7A:??;?B<AA<@;AB;BCFAGD<CCD7CC<CE<CC=BB<B<CA>CBGHEB=BBCBDB9BDFF8FBAB<BBABEDD3CC<CCCBAAA@9AA1999+:9>9@:@@@@1?A4::FDC1A7==1<5;:>@A/AA6A;;:?:? AS:i:7550 NS:f:75.50
2: VBT43:00109:00642 2 NOTANAC|HIV 431 255 168M * 0 168 ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAA CBBEBBBAA<ABBB>>:><BBDEE?ECC;?>8?=BBBCC=AABA>DCC<C>DD:@@BBBDBAA????;0<??=DEEBB<BGG7DGGGG0EBCC<BA=BCBBACCFD9@@@9===B=BACCBC=@>>===1=>>>>>AA:@:::@?CB@DEFM?D?@@9?CBCEDCFDE AS:i:8292 NS:f:82.92
2: VBT43:00129:00602 2 NOTANAC|HIV 661 255 86M1D28M * 0 115 CATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATACAGA @A>AB96817@9?<AA;AB<A<BCCC=BBDB=D<AAA>:BCB;???5=?ABBC;BB?EAAABBBCEB:@@CED9>>>BC<@@@AA4@@>A8:;G>CA;;:AB;ABDCCC::9=: AS:i:4917 NS:f:49.17
2: VBT43:00137:00609 2 NOTANAC|HIV 1633 255 48M * 0 48 AATGAACAAGTAGATAAATTAGTCAGTGCTGAAATCAGAAAAGTACTA 72:A@;BB=CCBACB??6A39:AAICCCBB:9926@@@ABB7BA?@?9 AS:i:2229 NS:f:22.29
2: VBT43:00108:00663 2 NOTANAC|HIV 84 255 42M1D72M * 0 115 AGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG >969999(;AA@/B9::=BBBECDD<BD:@>BBBBAC6AA299165B9?5==<=-=@7@CFCE3C;;9:A:@????5?E<CBCDDCDCAAA499>99929A?@BBH9BBBBB1B AS:i:4951 NS:f:49.51
2: VBT43:00108:00668 2 NOTANAC|HIV 323 255 173M * 0 173 TACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACA <CEBB:??FCED<BAAAAAB9;:DDC3BB:?8>9993::???J;BCCD=@@>>D:@?BBBB???AAA9AC;ABAA=A9::@?>>5;;2:=>CBEDB;A@<6AB=BCBBBBCBBB>??=CCCCBB<@:?A?>>5>:@6AA6B:@@???4;;<A688>;A6A@6AA?=777:877 AS:i:8471 NS:f:84.71
2: VBT43:00135:00688 2 NOTANAC|HIV 28 255 181M * 0 181 GTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA ;9666(:;AB<DA<AA=C=CC=BCC?JG;@@>5??8?C;BB?CC=B=CD@CCBBAB9=<5555(4888/>@@B;A@?BA??1::5=AAECCEE9::39:5):181:9AAAB,>>2;;;;<,=9?@:@7B???@3@A9C<AAB=B>D>A<DBCCCC4@@FAADB8BCHHH1B8>>3>BBBAA AS:i:8375 NS:f:83.75
2: VBT43:00136:00687 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA BD48859>>8?@:@@BBBCCC;AAAABBBBBCA@?7;8;@@>8A@AAA;AA/ AS:i:2417 NS:f:24.17
2: VBT43:00141:00654 2 NOTANAC|HIV 789 255 92M * 0 92 ATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTAC <<2771;<BB;EF?FFFDCBCC<???>CCC:AB=B<C=;:::+:>8?<AAABECCBAA??6<688,85<8AB8??BA>>;AC@A:BC?>=;9 AS:i:4215 NS:f:42.15
2: VBT43:00133:00701 2 NOTANAC|HIV 638 255 66M * 0 66 GATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC @:95:BBCAB:83:??ADDMMD0CBCBCAAA:A@;@9??8>>;A;BFBB;ABBB<B:BB::4:@?9 AS:i:2756 NS:f:27.56
2: VBT43:00125:00766 2 NOTANAC|HIV 1 255 113M * 0 113 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTG ??7@@<CBBA=BBD=BB@@?CCCCD=???AAA5A<??9@@:?>9@9@@<BBC;?>+999+9>9AA;BB;??9@;A@<BAABEC=BBAAAA7ACCC9CDCB>BBABCCD<CC<B AS:i:5541 NS:f:55.41
2: VBT43:00131:00771 2 NOTANAC|HIV 141 255 65M6I76M * 0 141 TTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAAT B<CCDCD4C<CD=D<B9955,:?6BCCCB?CCB@A<ABAAAA9A>>ABAB;BBCA@/<5::5:>?BAAC@=69>>89@4:8988.@9B>@CC9992:B@?@B=BA<A<BB<ABAC;BB56/7>@?;@A=>5B=CE<CC:>5=@0919 AS:i:6090 NS:f:60.90
2: VBT43:00143:00796 2 NOTANAC|HIV 1635 255 46M * 0 46 TGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA 8:91:6/66>>??BC<C=CBBBBCBCCCE=D>CEB@;@>=??@><: AS:i:2192 NS:f:21.92
2: VBT43:00147:00794 2 NOTANAC|HIV 863 255 184M * 0 184 CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCT >@?CE<BCCD<BBCCCBD?DBAA<AC<BBBB<A?>?A<C@@@A<@B@>A???@@.@@AC9A@?;494999*9A<B=CCCBCAAA>BBDBBA@<@@@@BJJ8B?ABB4CBBB<B=CB>?>BB<BBBACCA;A@??9>C??9@9?<C9AB<CC>;;==@?3?B5;;>H:@AAD9677(7.773;<< AS:i:8364 NS:f:83.64
2: VBT43:00149:00791 2 NOTANAC|HIV 851 255 135M * 0 135 GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG >@?,<7@9CE?BBGBDC>BABD=BBBACBD=BBCC<@A<B??@<BA?@@:@A:::58889?8=<DD.?@@E5>=<<6579??2>A:A<B@@@CCBC=CCCCFA@;???@BBB7CBBAA3A@@@;A<AB@A@@@<A AS:i:6103 NS:f:61.03
2: VBT43:00105:00812 2 NOTANAC|HIV 912 255 145M * 0 145 AGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGGCTTAATAGCAGAAGTACAGGAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGA >>>>A3@CAB:BB=>8???=?7AA;A@BBC@BBA>8?BBBA>>:>>>>>>>3:@@@@/@:@@::5:<?>BCB;BBACAA<@BAAB=CCBB<B<C;B<A@:@A<@@@@@E9BB<::6B:@@8728==/87>>9?D<<=??.;;;4; AS:i:6448 NS:f:64.48
2: VBT43:00129:00845 2 NOTANAC|HIV 286 255 197M * 0 197 CATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCA ACACD>DDB?F>CBAAAA>+?DBBBC0CCBBBB=BCCBAA>>BBBAB?B<@@@@A<9>;;;;;-;?:@:@<?@:@@?@@@5@@@<5::<6:98>@@@<AAA65929?9@??@:=8>>?><<3::3:>>>A:::6:9>5<<8<@BA9>>=?:9882558<995;;CA??D3ABA8<<5?6:99::5<>>@:A>>8>8? AS:i:9260 NS:f:92.60
2: VBT43:00105:00860 2 NOTANAC|HIV 382 255 174M * 0 174 ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGAT ;?77:99629A8????=CABA?A@D<??<?CAAABBC?CCC>@?9??@@:;:CAAADB=?=??993:<B?>>>5=;@9@@8?<>;;@>:@A??9??@9@9@@3?>>;;;@==>A@@@,@??9?=@::0554+9>>??*??>@2>?9>AF;;;89<3:==2;;;>4;;>>=@9=6 AS:i:8544 NS:f:85.44
2: VBT43:00108:00862 2 NOTANAC|HIV 497 255 114M * 0 114 AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGG BG:BBB=CFA@C7:::,=;;@@0<BBB;ABAEDCBBBBBA;ABB8ACCE7>>AAAA:@?<444/4<@ABBBB:B@@ABCBA<AAAA8AB@A5@???@@A=<488=AA,@?>>>/ AS:i:5466 NS:f:54.66
2: VBT43:00122:00854 2 NOTANAC|HIV 1 255 127M * 0 127 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA B?:BB=B@@A>BCB=CCCB=??@??8????CC7B>BC;;;CED<A8990:?>9@A,:::+:A9BB<CC>@@;?;A@<CCCFCC?BBAAAA7ABCC8CC??9?DC@@AA2::3:BBBBECC9A@2::+ AS:i:6225 NS:f:62.25
2: VBT43:00128:00870 2 NOTANAC|HIV 832 255 92M * 0 92 CAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGA <@9>456::>@>>?B9?:?BEE6B;B<@>4>>>>>>:@@AB;AA@@>=<4;741-1;6>::;8>=CBB:>;>>>;CCC<BC>>>?4?CAA6? AS:i:4190 NS:f:41.90
2: VBT43:00145:00853 2 NOTANAC|HIV 496 255 218M * 0 218 AAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA ACB4BGC4B>>7<6;;;(9999:(:DDG?HD?DCEEBBDDD=BBB<BBAD<AACBBB<AAAAAA9???BBBAC>BCABCCCA;AABA8B@BC;BB??CCB@?8@????1@@@@A<C<>>>EEC@?:B>@;;45/5?:ABBCC2>;4;::A?@@@<D@?@?@?>>*<=;;;>@@4>?9?4:;:;:3;9;::=4:98:0:7>??A9@@F=?>>8<9:582 AS:i:9965 NS:f:99.65
2: VBT43:00101:00937 2 NOTANAC|HIV 309 255 190M * 0 190 AAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA ???4??CCAB<ADBBABAA<ABAB@I9BAA@>B>888BBB4CD@E>D>CC=CBBDDD@FBBB<BBB=B=BA@AABBAAAA@6;=8=?>?=A7999:9?9::2:ABBDCCC?CDF>CB=CFFDBBBCAAACB=BAAA??9>;CBCCA9BBB<BA9A;AAA:?4:@AB9?>>7=5<<2<A@AA@@?=76655 AS:i:9358 NS:f:93.58
2: VBT43:00104:00911 2 NOTANAC|HIV 741 255 185M * 0 185 AGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGA @@BBBB/BBCBBBBAAA?BBB9959AAABBBBBAA<AC=CFCAA2999+:199+;;AB9CD?@@@??:::2:>A<@@A9AB=B=CACBCC7CB?C?E999AA???@@B>@>>>/=5>8??8@A?A>>7997A6==?><??9?BBB<BB<AAAA7>>>?A8@@@?@9?@?8<<7555'65560995 AS:i:8466 NS:f:84.66
2: VBT43:00110:00920 2 NOTANAC|HIV 537 255 167M * 0 167 TATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC 2:9@:@BBB<BBDEDF??A???C9AABBBBCC>B=??BAAA<ABBD7?:::,:A@BCJEIG>CBCC8CBBABB=B<BBBAA@BB<@?>888?8?A=CCCFJ6@B=BA@AA??>:>>>BEEEAD-CC@::7AE6@@9@9?@589195999@:AA@@9?67777/4?D8 AS:i:7614 NS:f:76.14
2: VBT43:00114:00936 2 NOTANAC|HIV 1 255 71M * 0 71 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATG 9B9BC<BEBB;B?>7>BACEEMGDC=@>99992:?DD:B?>DD>C>CD>CCC=AC,:::+:?9>@:@A<A? AS:i:3492 NS:f:34.92
2: VBT43:00126:00917 2 NOTANAC|HIV 715 255 88M * 0 88 TGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAA =B=ACCCBCDFBB=BCBBBAAAAAB<ABDGDB/BGBBA@@=<B><@@::2:?@B::;??CC<AA;B?>>>?+::,::>>9@;?D<BC? AS:i:4310 NS:f:43.10
2: VBT43:00129:00942 2 NOTANAC|HIV 156 255 52M6I104M * 0 156 TGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGCAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA :A@>>+95*6::695:ECBB>BC@AAB:>BA???B<BBCCC4B>CC<CCBBAAACE>A@@8AB>CBBBB8C=@C===66629BABCB;AA<D<@@:@EAA:??>?99<B@<BCBBBC=CC>FE=C=BB<B<BBB;>AABCD<C??>E:CAAA?==-99559* AS:i:6607 NS:f:66.07
2: VBT43:00134:00937 2 NOTANAC|HIV 481 255 29M1D19M * 0 49 CAAAGTAGCATGACAAAAATCTTAGAGCCTTTAAAAAACGAAATCCAG <@<9:75??????A>>?B/8:@;ABA??2::,9>>>>+BAA@,::795 AS:i:1774 NS:f:17.74
2: VBT43:00141:00902 2 NOTANAC|HIV 189 255 17M6I132M * 0 149 AAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTG BB:>><>>/A;AF<CCDEB@BAB=ABB:BB;?????4;9AAABB>>>:>BCCBD=BB=A;BB=DBBB<AAAB=BCCC>CBBBBC>BB=CB>C<BB<A<@CC<BAABCH;B>>:>2?ABBBCC0BDGCCC0BBBBBC=AA@@BCCC=AAA999/9? AS:i:6435 NS:f:64.35
2: $PFSEARCHV3 -n -t 1 -q -b -o 8 ./hiv.prf ./hiv.fastq # FASTQ to SAM
2: @HD VN:1.6 SO:coordinate
2: @SQ SN:NOTANAC|HIV LN:1680 DS:Profile for testing
2: VBT43:00033:00068 2 NOTANAC|HIV 314 255 31M1D44M * 0 76 CAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATT 888BC;BBD8::BB<ABBBAE<C9;:?@A;::BB7BD?C>C>CC5::AA@C<??>F<99:;A<CB>;;?;;;@C; AS:i:3020 NS:f:30.20
2: VBT43:00028:00207 18 NOTANAC|HIV 571 255 86M1D35M * 0 122 TCTGACTTAGAAATAGGGCAGCATAGAACAAAATAAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGG A@>>>@:@@A9EC:;8JEB?=ABBBB9<1)9999099>7A<A>@:99@A<BCCBCDC=CB<A?9+9:::9BCGD@@>A=BBABB/BBEDBAAB@@:CBA=B=BB=CC>C>CDCF=BBB:AA AS:i:4906 NS:f:49.06
2: VBT43:00030:00229 18 NOTANAC|HIV 166 255 35M5I103M * 0 138 TACAATACTCCAGTATTTGTCATAAAGAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAA CA:2:;>?>9????:-:::AACB<DDC8CAA<:,:::>>?=@>?8<:3::96<:5(999/8::D@@>7?>>@@@>:A:3:3@A<DECC=HFCC=BBB:6::CD=?:??:AA>D@DCAC=CAC<CCBBA:>;996/:::'5555 AS:i:5325 NS:f:53.25
2: VBT43:00042:00214 2 NOTANAC|HIV 1 255 63M * 0 63 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTT ?C:CC>CAAD<CDC>DDBABACBBB>BBBBBB7A>AA:A?=BC>C=CJ@DAC2::+:99(6;5 AS:i:3064 NS:f:30.64
2: VBT43:00046:00240 2 NOTANAC|HIV 271 255 80M * 0 80 CAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTC <B<C<=@8>:AAE>EBBCCN>ABBCC:BBBBBBB0ACCCCC0@:689:18?>;646:588>@CB9=@>>5?<@97777'6 AS:i:3993 NS:f:39.93
2: VBT43:00016:00266 18 NOTANAC|HIV 614 255 39M * 0 39 TGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAG >@BBAB<CCCBAAA;??7===/99<<7>?DDBB?A<BBB AS:i:1620 NS:f:16.20
2: VBT43:00018:00254 2 NOTANAC|HIV 251 255 36M * 0 36 CTCAAGACTTCTGTGAAGTTCAATTAGGAATACCAC 7:7<7769A:A@>A::3:A3::<A2::;?9?99189 AS:i:1717 NS:f:17.17
2: VBT43:00021:00272 2 NOTANAC|HIV 887 255 125M * 0 125 CAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGG CB;C@@@<ABABG<>>>993:BA:><9999+:??A:CB@?9;8889+9<6=:>>>@MKDD>BFBCBCC=A?=8888+99<<?2?ACC<A;AABBCC?8AACCCB?8>@@@9?B@@8?8?8D8AC< AS:i:5507 NS:f:55.07
2: VBT43:00023:00299 18 NOTANAC|HIV 937 255 61M * 0 61 CCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG :>99:BBBC=BBC@AB9376::9,;;;;?3ABBAAA<A;@BBBDCC>DEDAAAB;>88:=B AS:i:2717 NS:f:27.17
2: VBT43:00030:00270 18 NOTANAC|HIV 939 255 46M * 0 46 AGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAA ==BDBBB<AABBCC:6::AA:,999:9+8888@>;?:??CB:55)5 AS:i:2049 NS:f:20.49
2: VBT43:00031:00270 18 NOTANAC|HIV 308 255 37M1D44M1D68M * 0 151 AAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTACCATACCTAGTATAAACAATGCGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATG .DDD>>>>A919:AA@@??8>===>>9@@BC@A@BBB7CCCC>D>C=B9599@AB;CEDBB<C@>89299ABCEBBA@90899??CC?CCCBA9:2:999@@BBB999>CC;FCA<AACBAAADDDCBA=BCC?@?>B=DA;7177:<? AS:i:6187 NS:f:61.87
2: VBT43:00035:00274 2 NOTANAC|HIV 770 255 82M1D46M * 0 129 TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAG <AAB@B<AC<BE@>>>,;;,;<BB;C=CC:AB=BEC@@9::5:AA?:::,:?2::,:9:::+9?9A<C???BBCCCB;?9:99+9199>?7@@?ABE>DDCB>CDBBBCE=CC??:?B;@@??9?AFA AS:i:5534 NS:f:55.34
2: VBT43:00036:00253 18 NOTANAC|HIV 154 255 44M * 0 44 CCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAA 59>9*999+>999?>:@ABBD=CCB@A:DCCB:;99;;5&5555 AS:i:2041 NS:f:20.41
2: VBT43:00037:00292 2 NOTANAC|HIV 655 255 92M1D16M * 0 109 AAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCA 55555&5:A<A@AE>CC=A>CC=>?;?=B@BB;BAAA9A<AABC>ECD>DCC=BAB9993:A>DCFFFBBCCC>BAEECDD??9:7:ACGN8LBBDBA@?=DAAD??> AS:i:4795 NS:f:47.95
2: VBT43:00045:00293 18 NOTANAC|HIV 1 255 75M1D29M * 0 105 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATGACAGAAGAAAAAATAAAAGCATTAGTA ,AB:3;;AA:@C:4:;B??@DCCCADA@:+;;;2@:2::9DD<;5::;@@B>B;BA7A@@@;>5>??:@@8@;@8::BA<>7I6&:::::6,::::972?>AB< AS:i:4690 NS:f:46.90
2: VBT43:00014:00314 2 NOTANAC|HIV 910 255 119M * 0 119 GCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCA 55?:99:(:::D9C::;8?::::,::1:;AA?????@:ADCABBC199A9977)9@@?A4A??D9?9?@AABBB=9::?A??:?AAH<CCDC<C<C;A;AB:AA???>999)9=1=>?? AS:i:5494 NS:f:54.94
2: VBT43:00017:00303 18 NOTANAC|HIV 511 255 36M * 0 36 TTTAAAAAACGAAATCCAGACATAGTTATTTATCAA ;;8&:::999<4=??<EFIDD::::2964:::@>4< AS:i:1459 NS:f:14.59
2: VBT43:00017:00332 2 NOTANAC|HIV 74 255 54M * 0 54 CATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA ==?;B>>>;;5996666):>>9/;AAC;:::ACJN<CC<CC??@AFD9DD199+ AS:i:2678 NS:f:26.78
2: VBT43:00019:00303 18 NOTANAC|HIV 133 255 28M * 0 28 GGAAAAATTTCAAAAATTGGGCCTGAAA :9*::::,A69*?>>>8@6D>8>?6)// AS:i:1468 NS:f:14.68
2: VBT43:00034:00335 18 NOTANAC|HIV 806 255 25M1D20M1D17M * 0 64 AGATTTATCCAGGGATTAAGGTAAACAATTATGTAGACTCATTAGGGAACCAAAGCACTAAC AB:,:::>9>:,5556<7>;B@:@?B9?9??@BABACECF:266+9:1:/6*666==CB<BB AS:i:1946 NS:f:19.46
2: VBT43:00039:00346 2 NOTANAC|HIV 869 255 46M1D16M1D75M * 0 139 CAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGGAGATTCTAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAGAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCA <C?>:??CEMFD>BBAA;AB=BCCC=CCEAA<AA@AB<BBB<AE??>5>:99+9>9908;<<1=>9@:@@@ACDCE=CBEBA::2:9<9:::(9<<<D=BB==:=8@>@>:>=>2>@????9:845.789:588@7> AS:i:5161 NS:f:51.61
2: VBT43:00045:00317 2 NOTANAC|HIV 838 255 125M * 0 125 TGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC <BJCEC???992::::+:9@;BF=BBEDDC=CCBB<BA@@ACC=CCBC>CB<B?AA<A@@@A;BCBBB;BBB<CBBBBB2A>::/:===6;:?AA7AC>B?CCCCFEDMBMCBBA:9/8998999 AS:i:5665 NS:f:56.65
2: VBT43:00027:00364 2 NOTANAC|HIV 703 255 70M * 0 70 CATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATAC ==?@<BCCCCC=CB>CCBBDBBBCC?BBACBBB::::<A>????2>AA??@@C>BB:;;::9?>>>>9:5 AS:i:3464 NS:f:34.64
2: VBT43:00044:00376 18 NOTANAC|HIV 537 255 38M * 0 38 TATTTATCAATACATGGATGATTTGTATGTAGGATCTG @=1==??>;@@BBBB=BCCCC<FFDDCCBAC>BBBCAB AS:i:1873 NS:f:18.73
2: VBT43:00042:00499 2 NOTANAC|HIV 368 255 131M * 0 131 ACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA @?>;B>?8?>CCBCB995=555,:>8>AAA;ABAA@@AC<AA<BCCCJCB?:ABC:>=:;?;?999CBCCCD<CAA?64187>ACDC9??>8=;28489:882;@<;4<893;9@E6AAA??:;;?=<:9* AS:i:6671 NS:f:66.71
2: VBT43:00034:00547 18 NOTANAC|HIV 779 255 93M * 0 93 TAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAG ??BB7CBB;EE>@9??8?7@?@:???@@@?7?>>>9::2A??9C<@:@9+4489:?;ABAA???BBDB?8>:*9662>9B:DGCCBBB=BBBB AS:i:4279 NS:f:42.79
2: VBT43:00019:00608 18 NOTANAC|HIV 415 255 108M * 0 108 ACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGA *,96>@A>A/*//A@@ABCDEB??99::?@B=C=BCC@7??@?8?6B:2:9DBD@IDDA:///;?;@:HBAABDCA@A?</<<<??B9BBFDB:>/<<;)<<<<<AA< AS:i:5181 NS:f:51.81
2: VBT43:00024:00623 18 NOTANAC|HIV 815 255 103M * 0 103 CAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAA CA:AAA;@:B;D9)33333618:>?@BB@ABB?8?=3??;:?;@8@@>FD??8AAA:8>>@@CCA;CCBB<??:BAAA=CCABB=BBBCB>ACA9<<<5'555 AS:i:4501 NS:f:45.01
2: VBT43:00034:00614 18 NOTANAC|HIV 1 255 31M1D54M * 0 86 CCCATTAGTCCTATTGATACTGTACCAGTAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGA 7CC?:?BCB=CCC>BCCEC>>>?91:;>:+991=@8CC?DDB?>@?BC::9F:EB8BBBB=B<BCC?BB<@:A9399C?BB>CCC AS:i:3673 NS:f:36.73
2: VBT43:00006:00669 18 NOTANAC|HIV 1 255 39M * 0 39 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG )=9/)//7=4>B?9?@ABA:897?7;;:6(::91D?5<@ AS:i:1832 NS:f:18.32
2: VBT43:00017:00696 2 NOTANAC|HIV 1 255 62M * 0 62 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGT >@9BC>CA?@>GHGBAAACBAAB??8?@>>??+:1;>9?A=CC@D@CC;@?C:?>,:::+:: AS:i:3013 NS:f:30.13
2: VBT43:00023:00665 2 NOTANAC|HIV 522 255 36M1D45M1D22M * 0 105 AAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTAAGAGAACATCT 9:*6B7ABBAABCCC:??C:B???;@@@@9:1:?=9919>>>>>::2::::ACDD:A@@@7?A@A9ABCCCCDCC=AABA5AAA@A=E9??H?BA@@9>>=>< AS:i:4242 NS:f:42.42
2: VBT43:00042:00659 18 NOTANAC|HIV 54 255 98M * 0 98 CCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTG 9A@4@@@A;@8E@@9@@:@:@D;EFFDB;,:::8)9999/===>@?9A=@@AB;CC;CCC??:::9AAA=C8EEC=B:<66*;;;:,BCC/DDDB;?B AS:i:4765 NS:f:47.65
2: VBT43:00030:00704 18 NOTANAC|HIV 416 255 10M1D91M * 0 102 CACCAGGGATAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAA >:3:/7FB///ADCBBBCCC?@<BDDCBE=D<BCC@5?>>:2:,B:/77>BC=CCCC>:;:;=8<4>B@BDGBBABB@/<<<:B@<????B<B4ACB/CDC AS:i:4650 NS:f:46.50
2: VBT43:00046:00719 18 NOTANAC|HIV 1065 255 91M * 0 91 AAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAGGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAG ,:;;:4<?:?????5@@@ACCC<AABA@A7/88999>9?9??CCB>BAAB@??3;???AB<J?CCDFC>FEBBBBBCC=C??@5?>=5>@@ AS:i:4193 NS:f:41.93
2: VBT43:00029:00750 2 NOTANAC|HIV 626 255 88M * 0 88 TATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA +//6:=4B::::,:?8@@@??@DFAEB>BCDDDD+@?>ABBBC<CE<B=BB?BA<B=BCFC>ECDC:A<@A@C:@?B=BBC<<88./' AS:i:3930 NS:f:39.30
2: VBT43:00034:00758 18 NOTANAC|HIV 160 255 46M6I51M * 0 97 AACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAG ::,>>8@??9>9;:?8@?CAA:B::::::,???-BCBB<B9BBB???@@??7>8+9991:::+:::1::>>99<7;??A@B:2::8@;BB=A??C=BB<A875 AS:i:3694 NS:f:36.94
2: VBT43:00036:00778 18 NOTANAC|HIV 84 255 50M * 0 50 AGAAGAAAATAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAG @A=BC>ECCA:???DC>BBBCB9)89,:::A?>@A9?@@9:(::92A9AA AS:i:2072 NS:f:20.72
2: VBT43:00037:00780 2 NOTANAC|HIV 865 255 50M1D16M1D32M2D58M * 0 160 CTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGGAGATTCTAAAGAACCAGTACATGGAGCGTATTATGACCCACAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAATTAT ???9????<BBCCCBA;AB993:@8:BA>8>AA??<AAABB;@AB=AA977(7783(39;<5>9??7?B<B=A@FECAAA=CCCCC993:@?>?@5>>>>7??@@;@<A@:9::929@AAA>>7>?@>6;=77/78=-5/9?:?A@@AGAA:B9.. AS:i:5588 NS:f:55.88
2: VBT43:00042:00758 18 NOTANAC|HIV 528 255 82M * 0 82 AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAG ;<>B??@?:>?2EEAA;4:8:88?:==>CB:BCBCCBCBA:@@B@@@??;99:5>>>>5@???CBBBBB<G6*::::66655 AS:i:4093 NS:f:40.93
2: VBT43:00026:00990 18 NOTANAC|HIV 599 255 80M * 0 80 CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCA .(.----99<4>8>AAA?>>C>BCCCCCC=CC=AA:*99997<>BBAAAC>BBA@B+BBBBBCBBBBB:BBB?C=DC=B< AS:i:3687 NS:f:36.87
2: VBT43:00027:00977 2 NOTANAC|HIV 240 255 105M1D28M * 0 134 TAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTATTAGATGTAGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCA 386//+/ABC?DDBA=AABB=CBBB>C=CC>CB<A<??8?;AAC=A@@???:?CBCE9B::::::(::::::):??@CJ?JCA@AC9??CBA;;8<C@AA??@?7799+5<495?:9929BA??@7?@@B;CD AS:i:5564 NS:f:55.64
2: VBT43:00030:00977 18 NOTANAC|HIV 931 255 32M * 0 32 AAAGAACCAGTACATGGAGCGTATTATGACCC ::=>8?8@?<???BC=???>;:6/66:95(:: AS:i:1517 NS:f:15.17
2: VBT43:00047:00970 2 NOTANAC|HIV 19 255 117M * 0 117 ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA BAA:88B;EDCBBB3@3::;??9?B<A<B@;???9BG,:;;,:A9BA:AD>DC=B<DB?BBCAAA=CA::::2:AEE9DCCB=BDE???@9?E<BBCDBBDC9>>199:+:1:19<@ AS:i:5832 NS:f:58.32
2: VBT43:00011:01001 2 NOTANAC|HIV 528 255 91M * 0 91 AGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGA CCBCCDCCC:>>B<B@@B;99:?AA:@@@@AA9AAC???AA<??>>D9:93:??A39:A=@?@B999A9903;;<=-?CCCC<E:>:99CA AS:i:4315 NS:f:43.15
2: VBT43:00030:01017 18 NOTANAC|HIV 726 255 163M * 0 163 GCCTATAGAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACA 73::AA@B:::BC=:::2AAAAABDEB@B<A@@BCAB;@@@AA@CABA=5==8?;AA3ABB9A?8;8==6:/;;?<ABAB@BA8BBBA<AB;DCC=A;BAA?3>>AA;?<AABCBBBBAA9;7::3??@<B=B:AABCAAA<CCBA<A@@?@CB;BCCC<CC< AS:i:7772 NS:f:77.72
2: VBT43:00041:01043 18 NOTANAC|HIV 1112 255 44M * 0 44 TAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGGAAAG ABCDBB5AAAA>A:C=BCBBB<A;?AABBBA:?>?;*555)<=? AS:i:1997 NS:f:19.97
2: VBT43:00045:01043 18 NOTANAC|HIV 324 255 21M1D154M * 0 176 ACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA =;:544444)888>?AA><<7+99999@;B=BB>CB;::,:::?@;AA@<?8??CCCB@?@>9)999:@@BC>AA?????7A@>9:::::ABC>CC:CC:5::DDAAABAAADF>IGELEF>@8=>>:,:::@9:-::3ACDBC=CCCD@BB?:B>B:DDDAAGBB@?=;+??>? AS:i:8138 NS:f:81.38
2: VBT43:00046:01020 18 NOTANAC|HIV 609 255 93M * 0 93 GGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACT 4?9A?=<:66=6<A?:<<@:?B;>9>.??@@:CCCCCC:96BA@>@-A@A?>>>???@9@@A<A<BB>AC<C>DDCD@BB?4>>7BBBA=BBB AS:i:4090 NS:f:40.90
2: VBT43:00048:01010 2 NOTANAC|HIV 513 255 186M * 0 186 TAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCGCTGGATGGGTTATGA <AEFFE0EBCC:@@>CDGCAAACA=AAA9???C@CCBBBE=EBB???9?AAACBBC>BAAAACAA;ABBB:DCGF?BBBCCDDDC=B@@@@2@CBBC>C<BED>CCCC=CCAAB>>7>A<BBB@A2:929@@D@>>C;A?A999999)8B=;;;>@5@C:A:A@999199>9:>9@=??/6.6:99 AS:i:8496 NS:f:84.96
2: VBT43:00029:01090 18 NOTANAC|HIV 720 255 143M * 0 143 AGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAG ABBAB??:BBBAAADCBBB>@@?3CEDDDBFBBBC=AAACBAA<???CCDDCCC=:>?=BBDC<CA7><<5:3<>:?9CCB?BABABBA:A@AB=BB:BBB=F=A;A:,9999:6178BCABAB@>B?9??7AA@<A;>9??@ AS:i:6773 NS:f:67.73
2: VBT43:00036:01093 2 NOTANAC|HIV 965 255 132M1D50M * 0 183 CAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAGACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATAT ?<<?4?>>B<B>CDCDDAA=ABBBBCB=CCEE<AAA>9;;A;A<BC<CBBBBA???7?B:BBA?:@ABB;ABB:B=BC<BABBB>B@>>?0999)9??>99988)9?A@2:7DADB4ABCG;;6;>?@9999*::2::@9@MMD?EBBA@@::::+:A>>8?:@>?999/9@@CBCCC=CAA AS:i:8079 NS:f:80.79
2: VBT43:00006:01126 18 NOTANAC|HIV 438 255 24M1D23M * 0 48 CAATGTGCTTCCACAGGGATGGAAGGATCACCAGCAATATTCCAAAG 82?>>>>:1:2A::;9AAA?9?9C>C98:<7@>962:::15/5)555 AS:i:2004 NS:f:20.04
2: VBT43:00012:01124 18 NOTANAC|HIV 1 255 75M1D47M * 0 123 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG 5CD;2:::?:@@A;@B::9BBCBE>MF::6FJF>E@;?@9ED:=:::8;//)@4@E8JJ@?:C9CB=://+;8=@?:::BA>AA0DAAA;;,>>>>=9288CBCC<CA;BAAAD666)5959 AS:i:5578 NS:f:55.78
2: VBT43:00048:01143 2 NOTANAC|HIV 1 255 51M * 0 51 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT 9>1?A;ABDB;B@>8<BCCCBBBBB=BACCCC3B<C?9??;AA;A;AA:@A AS:i:2472 NS:f:24.72
2: VBT43:00008:01197 2 NOTANAC|HIV 397 255 103M * 0 103 CCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA A=BBA?CD>=3//)/:79:BCC=BBB:??=BBBCBCBB9::?A;???AAA7>8?@@?C:BB@076/78>????9?B@@:;;;8=9?>3><=;;;<;;8;:;;, AS:i:5329 NS:f:53.29
2: VBT43:00013:01159 18 NOTANAC|HIV 645 255 12M1D51M * 0 64 CACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCT AA?B;@ABBB/AABCBB@A@A:CCA<A<FE@EB=C>FAAAB??<>9?9??DB=CCB>DBB=CB AS:i:2464 NS:f:24.64
2: VBT43:00038:01160 18 NOTANAC|HIV 322 255 101M * 0 101 GTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGG EBCCB=CCCCA:AAB???CAAA:*::::::A;C=DC>CCCCC<FCEGD>CCB>@;??BBACCEBB@9>>>:@BCB>DDCDB9:3:::;A@BCCBBB<AB;A AS:i:4752 NS:f:47.52
2: VBT43:00046:01178 2 NOTANAC|HIV 40 255 98M * 0 98 CCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAA B<CC>B=BB?BB>8??7@AA5@A8??:@B>DD>D<BA=BDBBBC=BB????5?BBC9DFDC>CCCCCCD39839AACCCCE<BC9???4>:?:@8>>> AS:i:4910 NS:f:49.10
2: VBT43:00046:01188 18 NOTANAC|HIV 163 255 38M5I105M2D23M * 0 168 CCATACAATACTCCAGTATTTGTCATAAAGAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAAAGAAAAATCAGTAACAGTACTGGAT 444884/445551>>@@?9?@?E?AA9><;1>>>8:,:::EGEDFA<5:5*665/455(:::2>>A@ACA;CCBAAA@:@?=A;BB<ABDA<BBCB;CCCB<BBBBCB=BB=BB>C<FC?C<AAA<BCCBC@DBCB:4::@->@@@@>->>???BCBC=AAAFCCD@7??? AS:i:6169 NS:f:61.69
2: VBT43:00022:01216 2 NOTANAC|HIV 685 255 62M1D19M * 0 82 TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATG FC@BADC<C<AABB>CBB<CBB<A?A=>=8>B>ECCCCCCC993:????AAABBB>B??>>1>????@?C=C?;::::::: AS:i:3644 NS:f:36.44
2: VBT43:00017:01288 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA =?2773:A?<??9?B?@<??;4;7??BCFCBBCCC=B=ABBA:B>>@?AC>9 AS:i:2514 NS:f:25.14
2: VBT43:00025:01284 2 NOTANAC|HIV 350 255 149M * 0 149 CAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA AC>C<B<CI>CBC??;3;>@A<AB@<B<AA@@:>>AABBB:B@299??:@??????A9992:@A@BCCC?CCC;??7>@A??@@>789@?:?@@@AB<B;A?>??4=>=9@@5A;????@9??;;49>>9A:AB6?;;;=<:68888<< AS:i:7271 NS:f:72.71
2: VBT43:00045:01253 18 NOTANAC|HIV 648 255 79M1D13M * 0 93 ACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACCCCATCCTGATAAATGGACAGTACAGCTATACAGCTGCC A<878=9(999998989BC<CCC<:3::<A@;A;ABDH?DDB:AC<ECCC<A7DDCAA<BB@A?7???<@BBAB@@A@///D;;>CFBBA>C AS:i:3850 NS:f:38.50
2: VBT43:00033:01305 18 NOTANAC|HIV 167 255 34M5I33M * 0 67 ACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAG 77.899>A8AA@>7/899>>>>4>>9)99990=5<????=?AA:C?4?<<6::6(66:1;:A??>:):::?: AS:i:2363 NS:f:23.63
2: VBT43:00041:01311 2 NOTANAC|HIV 854 255 87M1I22M * 0 109 GAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGATACATGGAGCGTATTATGACCC <A6@6:=7::;;:928>>@=CAACCCE=BBB@;AC<FABA8AAAAA;AABB?9=@?;CA>>AA/AABA5@?>>:;9?AA5AC<C?C:79>@@BC=BBCCCCB;@C@>??? AS:i:4576 NS:f:45.76
2: VBT43:00044:01350 18 NOTANAC|HIV 432 255 69M * 0 69 TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT @BBBBBB;AAABB:4:4BBCF<DDCB:92992A@BBD>BCCC=BBB=B<B;B???BBBBAAA@/<<<<@ AS:i:3604 NS:f:36.04
2: VBT43:00049:01371 2 NOTANAC|HIV 645 255 102M * 0 102 CACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAA BCDBB>CBBDDCEEG08:9BBAAB;BB=E=B?9@@<A<C?A?<BBB@8@8>?AA;@??:>>>:8;A===5=A;C@@@AABBBB<@BAA>>>>???9=9999) AS:i:4800 NS:f:48.00
2: VBT43:00026:01484 18 NOTANAC|HIV 1 255 75M1D26M * 0 102 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATGACAGAAGAGAAAATAAAAGCATTA 9AA9399BC>CBC<BBBBBBBBCC=DCDC8HD?;@@>BB=ED>B<AA=CCC=C:EA7BB@@9C9BBD>CD;D:B///==BA>BBB?3BBBB3BBBBBA<A< AS:i:4593 NS:f:45.93
2: VBT43:00030:01601 18 NOTANAC|HIV 426 255 99M * 0 99 TAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAGAACGAAA ///A@:::@A@?>8>??AAA<C8<474)444=58+991@>>??9BAA?9999;@;@9AAA@@@=;;><8'8899:>9@ACB?<>3>>?9DDD8>;5(55 AS:i:4817 NS:f:48.17
2: VBT43:00023:01679 2 NOTANAC|HIV 723 255 127M * 0 127 ACAGCCTATACAGCTACCAGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATT CBBAA<BABCDBBAA@;8:86666&//AA?ABAA?>574BB<BCDC?BA<>?@:AB:AB===(999+99?A<D;AB9AA:@@@>=999/9?B:ABB:@?9@;B:;;;;.;?9@;>:;;:>=?C?;94 AS:i:5767 NS:f:57.67
2: VBT43:00024:01846 2 NOTANAC|HIV 358 255 91M * 0 91 TTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTC A?B@@88838>=A<BBC=B=BBBB?@<<<4773:C<AABC>BBBBBAAA;AA:??@>?A@<8:::5=@;ACCC@?AAB=@>>7>;<88838 AS:i:4443 NS:f:44.43
2: VBT43:00045:01828 18 NOTANAC|HIV 421 255 63M * 0 63 GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAA 6AA7/9:@@?@BBBCBA=8?;=?>@::2::AA9A:::9?7>?9AAB@?:BBBE<BBC<<8717 AS:i:3264 NS:f:32.64
2: VBT43:00025:01897 2 NOTANAC|HIV 1630 255 51M * 0 51 GGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGCACTA B2591:@;6<>7>?@@A99939>BBCBAB@BECJ9899CCC=BBBBA@AA9 AS:i:2235 NS:f:22.35
2: VBT43:00034:01890 2 NOTANAC|HIV 1 255 86M1D33M * 0 120 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAATAAAAGCATTAGTAGAAATTTGTACAGAA CB<CG?DCCC=BA@:AB???CCBBB>DECFCC8C>DD=BBACD:A:::2:@A8??,:::,:B8>?-::9>?8?8??@BBB@AA9:::::*5:<<,?@AA;==66666*6>2?>>=BBCA AS:i:5429 NS:f:54.29
2: VBT43:00040:01875 18 NOTANAC|HIV 590 255 14M1D52M1D25M * 0 93 AGCATAGAACAAAATAGAGGAACTGAGACAGCATCTGTTAAGGTGGGGATTTGACACACCAGACAAAAACATCAGAAAGAGCTCCCATTCC 36>@B?;6;;/FHFDA<A:A:BBAB@@999@@@AAC:7>5;8=?6CCAA:@9:9FBCB=CBB;;3FEGFCB@>>7*666;6::+:::8>:C AS:i:2959 NS:f:29.59
2: VBT43:00027:01904 2 NOTANAC|HIV 577 255 53M * 0 53 TTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATT ;0>?<=8>BBB<AAABBCBA?796666*:ABCD<A<ABBBCBBB<BB@@A;;: AS:i:2600 NS:f:26.00
2: VBT43:00037:01920 2 NOTANAC|HIV 391 255 108M * 0 108 ACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA AA<CABB=BBDC@A@C:8869BBBCCBB<BBB:?B<BBBB>@ABBB?@@:?<;;5859=CCCDC=CAA29929<ABCBB=BABB=CAA<A<BB;BBBBBCCA@9999* AS:i:5588 NS:f:55.88
2: VBT43:00048:01921 2 NOTANAC|HIV 392 255 139M * 0 139 CCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGA B<CABE>B?BBBCBI<C@:@CBBBAAB=BBB:@@<>AAB=??A@?@@A9@?>>:>9>;CCCBD=BCD<BA:A>CCBBA=B?>@<AAB=B>BB:AAABBBBBA@@@@?3ABB=CBBBB<BBC8BEEFE0CBDD9@@=BCA AS:i:6908 NS:f:69.08
2: VBT43:00035:01950 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BCC:>:>FB<BB<BAA>?AA>9@<ABBABB??@@B=A;@B@A=B@>@>ACA9 AS:i:2395 NS:f:23.95
2: VBT43:00061:00027 2 NOTANAC|HIV 231 255 60M * 0 60 CAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCC BACBCD<BC?D>??:>@>>;AAAA=BBCE=BBAB:@;@C;CC=B;=;3=5:;?9>AA==0 AS:i:3030 NS:f:30.30
2: VBT43:00060:00064 2 NOTANAC|HIV 34 255 92M * 0 92 TTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGA ;4=B;BB>CB=C=EC=C@>8>?,:::(6<7>@:AA>AC=C=CB=BBBBA>8<;>===/=>@@7BCCC=BBBB@>>:>D:A@?@@988+8=19 AS:i:4525 NS:f:45.25
2: VBT43:00085:00072 18 NOTANAC|HIV 936 255 90M * 0 90 ACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTA 90???ABBBB;BECECCB<BBCA:+5556;/;;>@?>9?:BB@@??=8@?A?BBA<AABC>CBCC>B<B=B?BB<BBECCCBA:AA;GG> AS:i:4043 NS:f:40.43
2: VBT43:00085:00090 2 NOTANAC|HIV 81 255 68M * 0 68 AGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA >9666+:>??1?CCD7CCCB<BCCBBBF3::2:DB>@:::29A6>>>2;0709<CBCC1BB:BCBBC3 AS:i:3215 NS:f:32.15
2: VBT43:00060:00142 2 NOTANAC|HIV 321 255 146M * 0 146 AGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGAT BCC>@ADFBAAABB:??CABBID@@>>>3AB>C>E=CC=CCCBAA:@@@B<A?B:??9?AAAD@?99:@4@?;ABBB=CAABB@?>7::2:@>:;@:909@?4?A9??A@997?=9=8=3>>=;>>7<5@9?:D3A9>3>A5A5?? AS:i:6851 NS:f:68.51
2: VBT43:00062:00112 2 NOTANAC|HIV 494 255 110M * 0 110 CAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA AABBB/BCB<BBCDB:>??5?DEJK0CCCC:AA=BCCBBBB@@;CED9>>>B7>>C@?>9>>>>@@5?:>@@@?;9>AA@@@@@:@@@@8ACDB5@?A872?8826::;= AS:i:5263 NS:f:52.63
2: VBT43:00063:00101 2 NOTANAC|HIV 163 255 43M6I106M * 0 149 CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA B:BCA;86:CDBD=A==7772:ABCECE=CCCCC4C=BC:CBBDDABBB=B@@9CB<A@@@?3?8@A9>>ACC;BBBAAA<CC=@;BA;AACA:>?@@6><CD=???F<D=DB;AA3;2:A:@;ADC:?@@CCC6:8@?@6@@@A<<?-699::* AS:i:6462 NS:f:64.62
2: VBT43:00063:00107 2 NOTANAC|HIV 678 255 93M * 0 93 ATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACAT A@;@;ACCB=DBBB:B=CBCC?ECC=CBB=AAAAAA:AA:ADCCBCCCCB<AAAA@BCA:;:;>:::::*:>>@ABBE=E:::?@?;AB@AA? AS:i:4386 NS:f:43.86
2: VBT43:00064:00120 18 NOTANAC|HIV 617 255 56M * 0 56 GAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAA ://+==B:;;B=BC>BBC4BCCD>CCDBA@@A<A@@@B-BBAB@B@?B@C9BAA9B AS:i:2529 NS:f:25.29
2: VBT43:00071:00106 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ::29:-:@A<BB?GGCCCFBB;B<BBBBDA@ABAA:A<ABBB;A@@@C@D?9 AS:i:2514 NS:f:25.14
2: VBT43:00072:00113 2 NOTANAC|HIV 886 255 131M * 0 131 ACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA ABB=BBBD<?BBBB=BBBBC=AAA>>>>>></=?AD:CBA@;A@===5@A;@<@CBAHCCC>AAACCCC=BABABBB399@@@5@BCC<C<C@>@>BB<BCABACB9??@@;BE;;5;7>7>9BC<DC711 AS:i:5827 NS:f:58.27
2: VBT43:00074:00114 18 NOTANAC|HIV 250 255 46M2D56M * 0 104 ACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAAT >>=7/77::2;;=?7?9?;4:::91949@9@AA:A@>>B9@@==9:9B-FEEE@>0;;;;;?ADCC;BBCCA@AA<C@BBBA<CCBB>>CGGD4CCBBB>AA AS:i:4356 NS:f:43.56
2: VBT43:00076:00115 18 NOTANAC|HIV 692 255 188M * 0 188 GTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAAGGGAACCAAAGCACTAACAGAAGTAGTA >6;;??588<5<99099???6>?;6:::?<?@@??6??@@@ACB:::;:::*:::::DBBCBB<B:::CAA<CDCCCCDCBCB>E:3::???A>?9??9?6@:3::;A@;FDBAFD:-:::-:::6??@;:,::::+999969198AA>AAD@@>=8=8B9DB<B<B<BBBBBBB;BBB@:@@BBBC; AS:i:8560 NS:f:85.60
2: VBT43:00088:00140 18 NOTANAC|HIV 222 255 74M2D47M1D85M * 0 209 AGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT A?@@@@7AC?:::C<C:7:5BA:BAAA<???A<BB?@;GCCDCA;AA;@@<?8??;A:AAC<??>?:,::/A///C+FFFFC:);;::::>?FA>BDDCCBBB=CA???7???CBCCDBA:+::::9?9@;C?9??AC?9?@@CG>EBB<989:??@BBBA@=5=>>;CEBB=BB@@@?@9AAA=?ABBBAFB>ED=FC9688A>? AS:i:8944 NS:f:89.44
2: VBT43:00095:00116 18 NOTANAC|HIV 583 255 84M * 0 84 ATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAG 8./*:88-9:AABA;AA3BBBFB@A>7?6>:92BBCA<AB@BAA?:??;BAB8CCBA<B@BBBBCC@CBBB@-<@@@@?>@CBB AS:i:3891 NS:f:38.91
2: VBT43:00098:00128 18 NOTANAC|HIV 88 255 104M * 0 104 AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAA /@?></====??9BBBCCA7?9+999@>ACC;CCB=A6A??99399C4JDDC<CCC4CFBB=A9AA9?@?5<<?9CB??B@<BBABC=EBBCB<BDBDBAA4BB AS:i:5029 NS:f:50.29
2: VBT43:00058:00178 18 NOTANAC|HIV 88 255 90M * 0 90 AAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCA +8888/?@@ABB<BBCCB>5==4=<???>?92999:?5AAA;9596C3CDCC<CCC4EEEB=B;FG>CF:,666*>;;AG;599CB@<C= AS:i:4452 NS:f:44.52
2: VBT43:00064:00186 18 NOTANAC|HIV 45 255 122M * 0 122 AATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCAT <EB=B:86B9DA4CC@@:B;CBC<CC<D<B?9??BB@A3@?<7*88891===?BA<AABCCB<CB<GFKBAAB?7>>>:*99991?;B=C4FEDE>DC?3????:ED?B;AA:*666*==>B AS:i:5698 NS:f:56.98
2: VBT43:00067:00180 18 NOTANAC|HIV 239 255 175M * 0 175 TTAATAAGAGAACTCAAGACTTTTGGGAAGTTCAATTAGGAATACCACATCCTGCAGGGATAAAAAAGAACAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGA 6:6>/)//>=8=?AA<A@@;,:::,A@<CA;AA<?8?@<@;CBE;BA:;::DCBCC<CB??->>>>>?7>>4???CCBC=CBB@@ACC>E::;;-:::@@B@BAA:*:::::;A;A;A?9><AA:+999;>;???>B=CBAACEAA@BB;BBB>ECCA<ABBCC?A:CCC<BBB? AS:i:8223 NS:f:82.23
2: VBT43:00071:00162 18 NOTANAC|HIV 464 255 102M * 0 102 GATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATG =@BBB=BDDB=CBB<B=B:BBBCCCDFDEGB3@>>9*6666<8?;B8CCB0DDDDDDD9BDB>CBBBBAAAB>CC<CCBB?:??ECBB<DBBCC<CCCC@BA AS:i:4708 NS:f:47.08
2: VBT43:00072:00198 2 NOTANAC|HIV 300 255 220M * 0 220 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAA <>>>B0B>BBBB0B???CC>CCCBB@BB>DBBA@>6???A>?=;55555*8A<B=C=??;?BBCBA:AC@@<@BB>B<BB>>>@>;@86629A<ABCC=C??????A9992:ABBCBCC?BBB:??9?BBB???DBBBCD>BBABAA<?<CBBAA9@AA17737<@AA??8?@@@;D??9?9??4?GA@@@HCA@A@@?,>??:BA@==3;;;.;HGEDD AS:i:10747 NS:f:107.47
2: VBT43:00074:00153 18 NOTANAC|HIV 426 255 97M * 0 97 TAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGA //>>DCFBCFEBB>EIDBB@8@9???@:AAAE<:3::5AACEC=BCCDA??@=C=C;ECCBBCBBABC?/;;;?/ABBCE>C=E4BA>+>>>>>>@< AS:i:4602 NS:f:46.02
2: VBT43:00081:00153 2 NOTANAC|HIV 585 255 119M * 0 119 AGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC ?AA6A??@??B?>795955':CACB?D?DBCBDCCC=CCCCC?=8;>9BBBBB7BB=CBBCDCCC=CBBABBBBB-BCBAABAE8A?:B6;=589199@@AC;A9991917??A9B@?: AS:i:5303 NS:f:53.03
2: VBT43:00085:00151 2 NOTANAC|HIV 1016 255 136M * 0 136 ATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGG A@ABB:BD:BBBB;???A9?AB9A<AA=@@@BEEE8CBB9???4?ABBBABBB/@@??8?@??AA7BAAABA;C@B@?9888(8B<B=C=CCBC=DCCCBBBBBB7BBAA;A<BBABB;@<BDCEBCB=:9:@@@4 AS:i:6450 NS:f:64.50
2: VBT43:00098:00159 2 NOTANAC|HIV 1 255 44M * 0 44 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGG AA5AB;BABB:>>@;AAA;78ACCE<AAAAB@4>9@@2::;@@; AS:i:2100 NS:f:21.00
2: VBT43:00098:00169 18 NOTANAC|HIV 755 255 87M * 0 87 GGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTA 8///IEAA<CAABAAABBAA=AA<BBBB=CC5DDD=B;BA<B;FDC=BBDCAAC9AA@9479<BCA<A<C>BC9GFBB;B=BCBCCB AS:i:4245 NS:f:42.45
2: VBT43:00056:00208 2 NOTANAC|HIV 56 255 70M1D32M1D37M * 0 141 CAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAGATTTCAAAAATTGGGCCTGAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAA ;???5??8>@888@DB9>:?B?EGCDBB>:99999(8>??4@AAA<BBB>>@>7<<4<????@CE=CE6::,8192:<A@9B?>>1=>>>>0?;AB9>9>999+9A4BB??@==>=>>7>AB99929?>@@?>19999) AS:i:5858 NS:f:58.58
2: VBT43:00057:00227 2 NOTANAC|HIV 207 255 79M * 0 79 TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCA 8AA:@A8><<<</;;?ABBCAAA:ABBBBB<BA=B=??:?BCD=BAAA=CCED=999CAB<BC=CC=C>CC=B<BBC<B AS:i:3902 NS:f:39.02
2: VBT43:00058:00219 2 NOTANAC|HIV 39 255 167M6I51M1I29M * 0 247 GCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGAACTTCTAGGAAGTTCAATTAGGAATACCA BC>BB<@<CB=BBC=>@7<??6?E=GD9?@?DF?C=CB;AAACBB<A?>???3>>CG4B>>?;DDCCBBB:@@9>AAAABB@6AB2988*44;8?<AABC.AA4=>;;>0?:@B<F<CCFCD8CB;C;??CAFFBCC>CCAAAA8BCCCCAA<CADDE1A:AA9C768CCAAA;=>=2<>7;;:::*878::<;9>?6?999@A;CB;A:@A?DBA@9@;<=6..(/=8<//;<A<@E=?@9?;??9?:??>8: AS:i:10608 NS:f:106.08
2: VBT43:00058:00220 2 NOTANAC|HIV 473 255 161M * 0 161 CAATATTCCAAAGTAACATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAATTATTTATCAATACGTGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGACAGCATCTGTTAAGG @>7@5:1:1::-:@A<???@>667772:BCAFCCCB<AAA5???AA5ACCC7CB;BBAB@@?;A<CCC9>>>>9?9>AAE;DA==;;279:?@@@@9>?AA@=>=.7667+7=?B6;;;BB>=:=646777'7==;>7=5;;KCB@A@AA??;9..'.'.3 AS:i:7408 NS:f:74.08
2: VBT43:00061:00249 18 NOTANAC|HIV 1114 255 44M * 0 44 GTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAGAC >C>7(8887990>9>>999+889>>@B@@9C@@@8CBB<CCBCA AS:i:2098 NS:f:20.98
2: VBT43:00067:00200 2 NOTANAC|HIV 662 255 88M * 0 88 ATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAGTGGACAGTACAGCCTATAGAGCTGCCAGATAAAGA BA>>:::,6><B>DB;@B<B:>;7>7@GEC;A399>=5>?>6>@A9?A?99099909C@@@@>AAA:AGB@????C=;2;;9=??/45 AS:i:3964 NS:f:39.64
2: VBT43:00076:00240 2 NOTANAC|HIV 1 255 98M * 0 98 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGC AA9CC=BBBB>ABB=BCB?@ACECC=BBEEKK9@9?B5::@DD:A;@B=BEB;?G-:::,:A9@>3769?A<B=CB=BCBAA@;<<3333(3<;;,8@ AS:i:4875 NS:f:48.75
2: VBT43:00088:00234 2 NOTANAC|HIV 662 255 120M * 0 120 ATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAG A@AB???:??9?=CC=:959;A@CC=CCDD:B<BBBB<BBB<AAA@ABBBAA:AG>DA@ABBHCCB=BCDDCCCCBBB<B?????2????CCCE?EAAA@A@=DGBBA???<66/6:4:< AS:i:5784 NS:f:57.84
2: VBT43:00090:00226 2 NOTANAC|HIV 404 255 83M * 0 83 TAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGT 9>>9?<7@B?@?B??7?<?4:939D???@@C?@@CC>A;97@?<?6@>>==/=;64::/:5;>::66669H:@@=9=6;@576 AS:i:4273 NS:f:42.73
2: VBT43:00094:00222 2 NOTANAC|HIV 576 255 172M * 0 172 CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAG AA<AABC<DAAA:ACDCBBBCB898855'9?@@B;B;CCB?AAB<4><@A95929?08;@??.>?9??>?????9@?@BADDDD*D>>9<?::1?A6<9@@:>>9>:@AA@9@@@@6A9A>>>9B@@;A??499>;<=3=@9?@@@@@?;;;9??AAA???>:;3;;;?E/? AS:i:8001 NS:f:80.01
2: VBT43:00095:00215 18 NOTANAC|HIV 425 255 81M * 0 81 TTAGATATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAG (//9:>>DDB@C==8?<=?995B;A@B:*::99::,::2@@CDC=CBBB=@??<A<;3:99B?@CDCCCC4CFHHCB;AAC AS:i:4110 NS:f:41.10
2: VBT43:00098:00230 2 NOTANAC|HIV 188 255 18M6I85M * 0 103 TAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCC <CA4:::::*67>><E?@@BCCBC=BCC<CC>CBBBB4B>CECBB:::5:DCBCB=BB=C=BB=BBCB=CA@@=BDFE<BBBBCB=AA=AA;A=BC<C=BAA:A@>;;; AS:i:4227 NS:f:42.27
2: VBT43:00050:00287 2 NOTANAC|HIV 105 255 21M1D143M * 0 165 AGAAATTTGTACAGAAATGGAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGT >966-:>5>A?@??BA6?</55+56;7A=AAAA/CC:ABBBA0@;AB3:19>>><2>@7<<??>:ADCCC<@@?CCE9BBBBBBE:BCCCC1>8?G6A??9??@4@@8=7655+7:?====:;;0;=>;??4;;9?3;;6>;;;9<;;;:?>@@38888/;46: AS:i:7305 NS:f:73.05
2: VBT43:00051:00295 2 NOTANAC|HIV 10 255 114M * 0 114 CCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAGTAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATG A;=?>;A>>>ABB???<AA9999,:;CC<CE>CC=BDCCCDCC=CB:BBB8CD=BD:BB<AC=C<BB>CCDCBB;@=:888,:<?@.A>>>:@ACAAAD5A@8???ABBAB9BA AS:i:5349 NS:f:53.49
2: VBT43:00052:00282 18 NOTANAC|HIV 207 255 89M2D14M1D101M * 0 207 TAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGA A7D9:2:::,:::1::>?A::5ED??@::6BD?E?DF?DCAF<FDAB>DC@B<DEBDA?9??=AB<?9??9:1::A<CCBBB:BBBBBDD@-?????:*99999>>AC>CA?BBBCC?EBBDC>DDDCBCBA@?:*999995=9A<C?:??BBB<C@@?B=ECC>:699@@>AC???=9AAC>CCCC=AAABB?@:@A@9CCA< AS:i:8893 NS:f:88.93
2: VBT43:00053:00282 2 NOTANAC|HIV 186 255 20M6I43M * 0 63 CATAAAGAAAAAGGAAAGTAGTAGTGGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAG =A>A@:ACKGC/F<??9@BB@ABFMMCDDC:BABBBBFJ8B=BCCDBAAG<CC????8??<@;=@??2< AS:i:2192 NS:f:21.92
2: VBT43:00056:00270 2 NOTANAC|HIV 1 255 100M * 0 100 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCAT AB:B@:@@??8?BC=BCBBBBAABB;?B?=??4?;EB?CC<BB:?;?G@DCD>?>1776*9>/992:<7@B=B<AB?BBBBBB;@>9898+7;;;1>@@8 AS:i:4978 NS:f:49.78
2: VBT43:00061:00250 18 NOTANAC|HIV 1 255 31M1D52M * 0 84 CCCATTAGTCCTATTGACACTGTACCAGTAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAA ?FD:699AB>CED=BCCBABA>:;296>909;7>><BC=CC=B=AAA@9;2:,99*DAC?<?;DCBA;:3@9AA=??=>>A6@ AS:i:3576 NS:f:35.76
2: VBT43:00061:00257 2 NOTANAC|HIV 387 255 69M * 0 69 ATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGG :9A9>?9@?@??BBBAA<<<9??8>AB??>BA;@@@8@C:??CB;:;@<=ABC<?????A;?9?A9999 AS:i:3511 NS:f:35.11
2: VBT43:00065:00267 18 NOTANAC|HIV 716 255 125M * 0 125 GGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT 6:::9>???>>8>=;;>@?ABAC<898.CCBBAABB@@?9???A@??9?@@>>>CC@?@:??9ABAA;A>2>>>8<7A?9?:BCB=BCB???9+885=9A?9@A@;C=C=BA8DEBD=C<@@B>B AS:i:6093 NS:f:60.93
2: VBT43:00068:00271 2 NOTANAC|HIV 82 255 124M6I105M * 0 229 GAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAGAAAAA =@=DCECCC4CCDD9DCAB>DDCBBAB5::3:CBAABJD;BB<BAA6>7><A8@@@@1?B6>==>>->8?A8C=DCCCC8BF:A;A??:?BBBA<ABBBBC8BACD???7>>>??3><AA299>>AAA@A:>AA2;;7>==>=.=9>>==>?@A9B999BB;AB;B<CB<CBA@;>>>@965:B<@@AA;A<BB=EC>C<A@;A;AAB:?>>:::,:?AAA9=:::::*9999:* AS:i:9699 NS:f:96.99
2: VBT43:00071:00271 18 NOTANAC|HIV 656 255 144M * 0 144 AAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGG ,FEEEA??>>=2=>>:B;D@9??8?8AAGA:FA?5??9BDA@:>??:BAA9ABBBA9@@@:@@B@@>??AA;ABACBBBBBBA;>?>0>>>>?BCBCBC>CCDCBBB=@ABCBCCABBB<BB=B@BB>EA7><<6A4<>:B:BC AS:i:6997 NS:f:69.97
2: VBT43:00083:00262 18 NOTANAC|HIV 86 255 115M * 0 115 AGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGA FA/A@@;,9998<<6@AAAB@:BB9AA@?;;?@8@A@:>3???89080>0AAAA6A773AA@@;@9A:099</;>?8AEBCBB=???B?:>@DE@9?????AA:CB>/;;;;6?4 AS:i:5503 NS:f:55.03
2: VBT43:00086:00286 2 NOTANAC|HIV 770 255 146M * 0 146 TACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAA 8;;BBD>BB<CEA>;;2::3:<DD>B<BF<AA<ADEBB@@@9@BB9>BB:AA;A=B=BCCB8B?:@<@@ABCCCCBBBB>CBCC6769=BB:ABBBBB;@?AC;??<@@AB<BAAB=BA=BABA;ABCBC<BAA??:>??9?@?@@ AS:i:6605 NS:f:66.05
2: VBT43:00063:00330 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ?A/9:,:::3:B=CIBAA::9,:1::@@CDCC@@@292:?@B;CBB@?8::: AS:i:2514 NS:f:25.14
2: VBT43:00082:00322 18 NOTANAC|HIV 135 255 44M * 0 44 AAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAG :::::,B?=-??>>8?9?@<GCC8CBB:DBEBBC=AAABB=>A? AS:i:2174 NS:f:21.74
2: VBT43:00091:00335 18 NOTANAC|HIV 114 255 92M6I100M * 0 192 TACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAA 4448909;;?/BBBB=@;>8>/;;;90999/<<<>8792?6>?@5AAB:CCBDCC?D@CEC@BBBB?9???@BCC<CCA3@@@@:@9AAABACBBCC>DD<DBCAAD>1>>:1:8=?@C@:AA@>>??>B@<@<BB4CBBB<BABA>BABA<BAAABB>DDBGB>;598;>7@AC>BBBC?4=<?B8<6<95$55555 AS:i:7966 NS:f:79.66
2: VBT43:00092:00308 2 NOTANAC|HIV 1648 255 33M * 0 33 AAATTAGTCAGTGCTGGAATCAGGAGAGTACTA <@9B;BCJCBBBBBAAAA<BABD>@A@AA>@>9 AS:i:1499 NS:f:14.99
2: VBT43:00066:00385 18 NOTANAC|HIV 456 255 42M1D16M2D66M * 0 127 ATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAA :@9:,::2>>?AA<CAA@:?@?:D;:,:::>?A???A@9+999:A<BBCAB98*:99,:::99+9999?;>@BA@@=;AA;E@AB:69:BBCC>DDCC?9???<@>CCB>AACDBBB;6::/+/ AS:i:5232 NS:f:52.32
2: VBT43:00073:00350 2 NOTANAC|HIV 576 255 141M * 0 141 CTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATG BB>AACA8??BC>DDDCBBCCA:>>><</?????:@;AABC@@?A;AACC>>>6=>4;;?GE/>>8>?>?>>==7=>>??BAAA*A@@>>>>D3AA9A9>>8<=8<;DD><8>AAA5>8?AAA9A??9?@@188;455/5= AS:i:6547 NS:f:65.47
2: VBT43:00085:00390 18 NOTANAC|HIV 425 255 80M * 0 80 TTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTA .77>99;@DCBB@@:AAACC9899CCBB9DBBA851551@>BA?;BABB@BCB<?8?6@@?BBBCBABCC4CCCB8B@@: AS:i:4076 NS:f:40.76
2: VBT43:00073:00439 18 NOTANAC|HIV 334 255 11M1D59M1D107M * 0 179 GGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTT 1::>>@ABFBD8CCB@:?9A;@?9?@CCC>HBCCE>@>@::3::DDBCAA@?92:::<ACCB<AAA@??90889998?@=AB=EA9AA9399CDBCBBBBABC=CCCCCC>C=CCBB;BCBB@:2992CCBCB=EBFC>AA@;>8:2799ABBBA<>>6(9999(>AA;;66/6*66 AS:i:7651 NS:f:76.51
2: VBT43:00066:00497 18 NOTANAC|HIV 753 255 59M * 0 59 CTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTT 9>9A>@@A>>6A@@999BBA>A<CC=CBCCCE>C;C@;>5??8@6CBB<A@@ABCC<DD AS:i:2801 NS:f:28.01
2: VBT43:00077:00483 2 NOTANAC|HIV 15 255 121M * 0 121 TGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA >CCBCCBBBBE>A>?;;;3==BC<AB>CC<A;A@@@BC;@>7>>>1>>5?B:AA>BB<B>BB=CBCDBB?BAAAA</?<<</@AAB=CCCCAAA:AC;A?@@BBCA7@?0998(77>8@;> AS:i:5832 NS:f:58.32
2: VBT43:00078:00474 2 NOTANAC|HIV 393 255 157M * 0 157 CATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC BCBCC>EBCBFAAB:BC=CBAACCCF<@>>5>A<@=?C@@@@<A=<<5:889;?:>>CB@BB8@BB<BB;@=AB@=>:>>>@8B@@;@;@A9@AABBBBCCAA@@@.BBB=BBCBB:=??4?BBBC0CBBB;BB<BCCBAA>>>9AAA8>;;A;A@@ AS:i:7690 NS:f:76.90
2: VBT43:00089:00493 18 NOTANAC|HIV 600 255 112M * 0 112 AAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGAT )7641-99@:B;CA???;?B=BBCBCCB=CB=BBA3>>>A=BCFGBBAB<DC@>9(666669:@=>@@IEB;@=BB>A@:A=BDBE;>BB<GA<AABC=DBB=BBC;ABAAA AS:i:5060 NS:f:50.60
2: VBT43:00093:00480 18 NOTANAC|HIV 706 255 21M1D103M * 0 125 CCTGATAAATGGACAGTACAGCTATAAAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAA './>?=4>>>:?>>BCBCB@>>>BB:HBBBLB<BB@2@@@@9::ABAB=CCCCBAC<FCCCBAAEDDD?FD=CBF:,:::,>>;C:A@;:*8666<BBCCCC<CCCB>BC>BBB;B<@7@>+99 AS:i:5566 NS:f:55.66
2: VBT43:00055:00547 2 NOTANAC|HIV 622 255 92M1D32M1D38M1D30M * 0 195 CATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAATTAAATTGGGCAAGTCAGATTTATCCA ==?@?::3;A@FNNNN9;98;CBCBBBD=A==A@>;>>*;@?;@@=@4==8><@?9BB<C;BB>>8?AA?6=599:>7?>E:A>>8=?=87.7:1:::88=>956/8A@ABA?DAA@9=5555'8;=>@>>>9@?777=>7=@A>>>?@@;;3;B9?=666+7>2>8??5?8?H6@@9?@@>C888(7;;4: AS:i:7838 NS:f:78.38
2: VBT43:00060:00510 2 NOTANAC|HIV 430 255 85M * 0 85 TATCAGTACAATGTGCTTCCACAGGGGTGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGGGCCTTTTA 8???C?????8?@@BBC=C=CCCEDD8ED=BA<A>BBBBC<???>8?9929<AA;AAACBA?;>:9988*:>>8?A@9A<B@@,: AS:i:4183 NS:f:41.83
2: VBT43:00092:00531 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA >>:@F<DED?BC:@?BBBBBB;BCCCCEBBCDCBB<A<A@AC;@@?A?<?>: AS:i:2417 NS:f:24.17
2: VBT43:00072:00550 2 NOTANAC|HIV 421 255 79M * 0 79 GGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA BC9BB:??DCCGCBBBDA@;@>A>??9?;AACCC9CDE;BA8A;BCBAB<BB??:@AA:@:@@6A@AA;;:==76555' AS:i:4090 NS:f:40.90
2: VBT43:00081:00586 18 NOTANAC|HIV 163 255 43M6I90M * 0 133 CCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAG )///::2::BBB>IDFF:5::;BAAA7AD:*::::2>5>>?ABBBBB=7<4)8985>>9*:::1:8=;>>A;CBB@ABB?EC<C=CC=BBB?9??AA=BCGB@BACCBB;A@=BD>@<AA>>:>>D>BBCB?9===C:: AS:i:5567 NS:f:55.67
2: VBT43:00087:00596 18 NOTANAC|HIV 160 255 46M6I10M1D79M2D12M * 0 150 AAACCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAA -;/)//:::2@?AA?9??BBB<CCBDDCB9DB:*;;;;2?6DDB???999?9AB;CBC6;;/(//(//;ABCB>DB@????9CA<A<CC>DDCE=CECB;@AA@;AAFCAC=GG?F?;A9@@::5;:B;BCDCC<C>>?8:;@0AACAA=,99 AS:i:5216 NS:f:52.16
2: VBT43:00056:00615 18 NOTANAC|HIV 278 255 28M3D36M1D80M1D71M1D20M * 0 241 GAATACCACATCCCGCAGGCTAAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAAA >8@@@;9::::4>@?AA<@?9*9999:1CCECCCBBA;AACCBA==8?9999+9::@<??A///5@@<@7B=C>DA<AACCC<CBCCB>BA@<9399CBBEDBBB9/8889AA@@;AA@@>??9?A?;:9999DCC>BB9CC///;DCCCBCBCBB=BBAABB=C=BCCC=CCB@;92993??@CC?CCBB<9987@::2888>>CAC@@A6*9969A?ABDCC>E4BBC4CDDC AS:i:9291 NS:f:92.91
2: VBT43:00059:00623 2 NOTANAC|HIV 832 255 92M * 0 92 CAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAGCTGGCAGAAAACAGGGA ?A<>388B@BBCBAA?>9?>?>3?;C<CC8ABBBB?:??:::?@?@@?A9??@@9>?6?@@@9@@BAD8>????AABG<@@::;;,;;;@3@ AS:i:4014 NS:f:40.14
2: VBT43:00065:00613 18 NOTANAC|HIV 856 255 61M * 0 61 ACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAA A761664><<>;BBCE>CAAAECB>DGBB:>A;ACC=:??CDB>BCCDC=AAA9@@D6*66 AS:i:2706 NS:f:27.06
2: VBT43:00075:00636 18 NOTANAC|HIV 614 255 43M1D89M1D16M * 0 150 TGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCA 5<<<>>9@A???A92984:;:.::<<8AA@@@??<6<=@A@,@@?<:<;;;<2>>>:A:@:46:8>8?<<<9<=<1<64558@9@@A:???:AA?@7/33348;=???@@@@<>>>BBEBCCCB<@A:(5555<DAAAA<EBCECBB> AS:i:6044 NS:f:60.44
2: VBT43:00081:00626 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BBAAA<AGD?CF>BCCECBCB9B<BAA@DAABBBB:=:=@A@9A?>?>8>>6 AS:i:2514 NS:f:25.14
2: VBT43:00083:00617 18 NOTANAC|HIV 67 255 70M * 0 70 CAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAA :2::8?9@;2::AAAA8DC@:+:::9*9669>>:CECCC:,98+===>>?AA9AA@?/???=7>8?7>6> AS:i:3207 NS:f:32.07
2: VBT43:00084:00619 2 NOTANAC|HIV 1009 255 42M * 0 42 TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAA <D=CD@AABE??,99-:A??9?AA@;:::3:;@A8?>?999+ AS:i:2067 NS:f:20.67
2: VBT43:00090:00614 18 NOTANAC|HIV 1039 255 20M1D7M1D14M1D14M1D21M1D35M * 0 116 AAGAATCTGAAAACAGGAAATATGCAAAATGAGGAGTGCCCCACTAATGATGTAAACAATTAACAGAAGTAGTGCAAAGATAACCACAGAAAGCATAGTAATATGGGGAAA 189<?=<>9(9998A99)999>AEC8FFCCCC=BBBA9+5588B9199BA@A959998<9?<?BA9699CCGGC91779>;9?:?A<>>9>>@ABBBC:289:6(66:,;; AS:i:3082 NS:f:30.82
2: VBT43:00053:00689 18 NOTANAC|HIV 726 255 182M * 0 182 GCCTATAGAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAACAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAAC :3:=@>?;../AA;99:*:::::EAEAC>7>>@AAAB<999CBCCC???=CB=CBAA8DEB;BB=C<D9393???<CCBBAB?9@@@C<BB:C@A;:-:::9+999909199B@>BC>>=;81885AA?:>99+888@<;?:@@@B;BBBABDB<AAB?9?AADEGC=BAACC=DBBAC?CF AS:i:8506 NS:f:85.06
2: VBT43:00085:00660 2 NOTANAC|HIV 840 255 123M * 0 123 TAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCC AECCABB>D<::::+:1::@@:BCBBED>CEDE>BCBCBCC<ABBB=BC=BBBC>CCCCC>EDCBB;A::27?;;BC8;;;D;CCCC:83:::+:>6<9BB@BBBCC=C??B@::29:999:: AS:i:5660 NS:f:56.60
2: VBT43:00085:00675 18 NOTANAC|HIV 402 255 80M * 0 80 TATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCC ?<7+8778=>8;;;>>8@B@AC8677>@@BAABBBCC<ACCBBA<A:AACE<E::9=A:AB<@AABB?IBBA>AA?=B9? AS:i:4018 NS:f:40.18
2: VBT43:00090:00698 2 NOTANAC|HIV 265 255 80M * 0 80 GAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATA CD<CC>DD=C<??>B=CCC?CC@9773:AE>C=CBBAA@@0@AABBC0CBCCCE=C@@ABBB?<?A@@?@9?@<>==<?7 AS:i:3746 NS:f:37.46
2: VBT43:00092:00686 18 NOTANAC|HIV 613 255 70M * 0 70 CTGAGAGAACATCTATTGAAGTAAGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCC 9?;95>?9??@ACBE<E>7=>=5=7BB<CCCB>=>>7>=AA9)999999?>>>:2999<B=CB<BE=B>B AS:i:2921 NS:f:29.21
2: VBT43:00050:00718 18 NOTANAC|HIV 620 255 37M1D184M * 0 222 AACATCTATTGAAGTAAGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGAACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTA 099AACCC=CB;A@9090>9099AAACDD>BAA>:*:::::BA==9+9995=5?@;BC?C=:::?7>>@@<A<BA::3@?@:A@9199A=9*9995>?@BBDBB@@9AAABAC:::??9ACB3AAAAADDCDCCA;AAAA@B;::9?@@CCCCB<BA;AAAA@@;:3:919+881899<<<DBAA>A>9>?@=CEC<CCC>B;BABC8CBBD>B>BDGCAA AS:i:9199 NS:f:91.99
2: VBT43:00073:00710 18 NOTANAC|HIV 79 255 106M * 0 106 ACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG 677>8>>=4'4444*7779;A;ABABBB9CB8BBBBBBA>5>=>9<4???9C=C=C4CCBC:C::2@@@@<B<CC=CC?5???9CCCEBC<BBACB>BBDDD>CBA AS:i:5222 NS:f:52.22
2: VBT43:00077:00700 2 NOTANAC|HIV 405 255 145M * 0 145 AAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATAC 6;2;;4:77>B?CB>BCC=EC=???>999=<=@@B:A?@999;@7@=@<?-:==6;?5<5<<;;;7>;;;9A@@:@9??6;;>??A;;;9<==='999(3864A:BFA.B@@@?*>>>>5552;79:@>?>D5>?@4????8<<7 AS:i:6934 NS:f:69.34
2: VBT43:00081:00722 18 NOTANAC|HIV 601 255 56M1D126M * 0 183 AAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTG .<7643-.'.';;><BBC>6;>CCCB?9?4154A:A;CB;BBBEBCAB=CC@?9'88888><?A?2A?A8?;AA;AA;A;@AA@:>=?B<A;BB@@:BBB<A@:8AC:@=8>>>9===AA>?B@@<BBAA@@@@AAB<BBA/AAAAADDDBBB;BBBDDBB>CCCACACBBBC<BC>BBBCB AS:i:7746 NS:f:77.46
2: VBT43:00083:00736 2 NOTANAC|HIV 590 255 116M * 0 116 AGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCAT AADBE@@?=BBBBB4CBBCB=B<BBC=CBCB<=??@?9919A;ABBA:C=A<ABBBBCCC>DBA??><<<-<>>???EC8AA;B:@@:AA<A<BBCC;CC@@9@:?<=A;A@@:C@ AS:i:4913 NS:f:49.13
2: VBT43:00074:00791 2 NOTANAC|HIV 455 255 142M * 0 142 GATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGATATAATTATTTATCAATACGTGGATGATTTGTATGTAGAATCTGACTTAGAAATAGGGCAGCATAG 9:>;199,:;ABBBA=BCAB<CB@:@<AB<CCDHBCCCCA>>>>/@BB>BAAEA2:::+9>>@A9BGDE7GG<ECBBB9929:>==5?A@@;@ABBCF=??>???7??>AA@???=AAABCDG>CCCC<CCCB<BCCAAAC9 AS:i:6767 NS:f:67.67
2: VBT43:00084:00769 18 NOTANAC|HIV 610 255 139M * 0 139 GAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAG ;5<;>A877C<CCBCCBB;BB=AAA7DBBA;@AHC@@@D>ECFA:)::::::DDACC>DDC:B:?=8==9@9BAD>8<@A9EC:@A@A;@@A;BDA<A@@??9AAA;AABACCBBBB=CBBBCCCCKED=@@@4ECCB@ AS:i:6364 NS:f:63.64
2: VBT43:00092:00779 2 NOTANAC|HIV 343 255 214M * 0 214 TATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATG 29:ABB2DA;B=B;?EBHCCCCC<CBBB>CBD>I=BBCCABCBB>>=8>B=CBBB;>7999;:C9::7:ABBBBCBDEDD>;:6:CAABBBCCCCCC=CACB??:><DBAAB9CCA9??5@;@AA;;3;@@?9@@@:A;BB6A@@???BBAABC@?+755+5?@9>8>==,<=<=<*<ADD3995;...<<;=@5<==2;9?A9>>;B;;4;:9 AS:i:10077 NS:f:100.77
2: VBT43:00098:00769 18 NOTANAC|HIV 78 255 17M1D105M * 0 123 GACAGAAGAGAAAATAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGA 8@ACC<@BBC8DA=4)733><6??BAAB<C?8?@?AACFD;FCA<A7BAA;B=C>D3CAA:,:::-CCBD<DE<B;A@>2>>>5BC=CCB=??>BA>BCCCC>FGDDBD?7???0<<<>9A: AS:i:5188 NS:f:51.88
2: VBT43:00098:00782 18 NOTANAC|HIV 939 255 111M * 0 111 AGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAA EA>>?@?9@?@@@563??>>=.<==>@.@@@>==7=7=@AB>CA<CBAAB??<AAAB=@@AB;A;@9?9BA;A@???AAC<C?8=;?AA;AAB@6;6-::2A:269<:5*7 AS:i:5015 NS:f:50.15
2: VBT43:00098:00791 18 NOTANAC|HIV 1 255 147M * 0 147 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAA 0:::3:;CC=CBB=GCCDFFAA@@:>>>9*:::1@<6772<<7=7>>88::;@9AA2@?;?9A:EHE>CB=B=C?9?@BBAA;@:(888889,<=ABCC<BFFDDC<DD=DCC?B?BA:ECD=B8DDB?@:@:G/GBGG:?77/<<9 AS:i:7314 NS:f:73.14
2: VBT43:00099:00769 18 NOTANAC|HIV 543 255 47M1D47M * 0 95 TCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGG ??:AA777?9???@?5A@:::<8>>9AA@??><>688</:::11487;<==@@:@?1@@?>:>>B=B;AA:88BBC>CCCBCED>@>8?><4?: AS:i:4231 NS:f:42.31
2: VBT43:00067:00804 2 NOTANAC|HIV 839 255 177M * 0 177 GTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACAT BCABBDBD>A8@???5?;B=BC>DD??@C=C@??>BBBAABC=BB>A:A@:?AA;8>>>>98<<../>AAA;C???@@/>??:1@:87247:::,:@9?;B@@@FBAB<BBAAC::3:@@9:::+9>?@A7BBCC<E<C@>>>BC9@@BA@==8=>>>:@@A@:@:@9@6A>:BA<> AS:i:7863 NS:f:78.63
2: VBT43:00080:00833 18 NOTANAC|HIV 993 255 111M * 0 111 GCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATT 77?9@???<B=B>C=DC;9999::A:,::,:::>9199;B<AA;BB;CB=CCBA8*::::A::,::::FDB:*55556@=:?BCBA<BCBBBAC@AC><=:5(:::::=7< AS:i:5212 NS:f:52.12
2: VBT43:00081:00824 18 NOTANAC|HIV 138 255 56M * 0 56 AATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGA :9,B?:*::::3A:FD<@@9+888+B==<?=7==BBB>CC??=9><@B:::7<<<8 AS:i:2672 NS:f:26.72
2: VBT43:00096:00842 18 NOTANAC|HIV 669 255 108M * 0 108 AGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAA 55672894::;D;E@@?9??@5@@9@?@@:>>>9@@A9@?>>:5:>><BABBB@AAA.+--:::BAAAAB=@@>/BBCACB@?BDB@BEDCBAAABBBBBB?A>BB<G AS:i:5164 NS:f:51.64
2: VBT43:00090:00869 18 NOTANAC|HIV 207 255 9M1D47M * 0 57 TAAATGGAGAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTG 5)5564;>9-::2:9BAEDL>CI@??BA;AA=K?EEAFDD8255?51:8A6179<? AS:i:2397 NS:f:23.97
2: VBT43:00092:00888 2 NOTANAC|HIV 739 255 69M * 0 69 CCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAG B=A>@@>A3AABIDCCE>CBBBBCC=BBDB>>>CCAB<@@;BBCAA5>>>/<8>B:B=BC:BC=CC=9= AS:i:3468 NS:f:34.68
2: VBT43:00093:00895 18 NOTANAC|HIV 1069 255 87M * 0 87 ATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG 947=;A@?AA7ACBBB@@9CCCBBA@5@@@A:B=C=CEEE=BBCCCC@B6DD????9?8@@=>92999BBCCDD>???@4@@>5>>5 AS:i:4121 NS:f:41.21
2: VBT43:00094:00865 18 NOTANAC|HIV 810 255 48M * 0 48 TTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAAC 1:9@:@@9A??8?8>7>@4@@?>9:2:;AA@AB>@C??7>=,99>4@< AS:i:2041 NS:f:20.41
2: VBT43:00094:00894 18 NOTANAC|HIV 346 255 175M * 0 175 TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAAC 8JG@A;E>B<B;5:;CBC@KAABB=C:92:3::ACDBCBA?9)99919:AB<BCFCCAA:EC?9?=799AA@;A?7==/+//AAABCCCCBCC>EFBCC@:?9??@D<HFDE=:5::3CCCFB=BCCB=@>>;B<A:@@ABBBABBBBC/CBDDDA;ABACB:C/<<5&5555:: AS:i:8426 NS:f:84.26
2: VBT43:00098:00870 18 NOTANAC|HIV 261 255 36M1D96M * 0 133 CTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACC CCB?E>GF>AA:>6:98/)//@:@A??;5;::D:2:;C0CCGC??0?>????CBCD>CCEMDDC;5;;C:::<BCBCCBBBA>2???@?>F@N?EB=CBBA:299:@@<CCB=:399BABCC@@?A6=<=:8 AS:i:5596 NS:f:55.96
2: VBT43:00099:00888 18 NOTANAC|HIV 1 255 143M * 0 143 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTC ,:::2::DA;EBE>FFF@@@F<<<8779>/>>>7=61:;3DC<C=CC=@A@=E=EC8CB@?8?7@@@:@@;?9>9279ACAB=C?0?99996(6678@B=BBBCCC:AB:BBBACABB;CBC?D9FDD=9988B/BBBC=EBA AS:i:7108 NS:f:71.08
2: VBT43:00055:00943 18 NOTANAC|HIV 178 255 23M5I95M2D111M * 0 231 GTATTTGTCATAAAGAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAAC ;;9+99:==AA;CA?6??>8>5>>?=>?@:::>CC<CB91:98*:::1:::AE::9ECCAA>>7A=6=7@A:@AB96:;B?8@??>6>>>?@?9@@9>>990995<59:9;@@@BA8?AA?684>);999<3&999999??<@<BBBCCC@@9@>>=>9A@@@@@@?>>8(77789:B=F<CC=A@@>@9BC?BA<CFA<B=BBFDEEECBBC<CCC=DDDA;AA:;8@C<DCD AS:i:9255 NS:f:92.55
2: VBT43:00067:00937 2 NOTANAC|HIV 497 255 129M * 0 129 AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC AC9B?>:?A@DD29::(:6666&6>AC:==>CCCCBBB?;48==4=@?@;BBBB@@8A@>88929?A@AB@A;AA@@@A?>8>BBC9AAED3@<>??@BAB9@@AAA,@@A@@9?:AA@A@@A@;@=B. AS:i:6129 NS:f:61.29
2: VBT43:00077:00922 2 NOTANAC|HIV 1631 255 50M * 0 50 GAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ;;A9BB>:@B49;DA=;99(/(/<//:BB???C>A1:9991:99<>>=>5 AS:i:2407 NS:f:24.07
2: VBT43:00077:00928 18 NOTANAC|HIV 667 255 101M * 0 101 AAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGAAAAAGACAGCTGGGCTGTCAATGA <GBB7;4::7>>;A;A?>>9>>>5A?8=;;92::=6A@@;B?>@?8===8?@B9<A>?=.*..<<A@::7>?;?BA/CBBBA@AACEC<DBBEECEAA@BC AS:i:4714 NS:f:47.14
2: VBT43:00086:00913 2 NOTANAC|HIV 911 255 87M * 0 87 CAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGG <A:666(666:,9@>>8?AABB7BC:A;:;:CCAAA=ECCCBBB<B@?>>>>2>:@FD3AAEE<A6;;;;???;???DBBB<@@@A: AS:i:3995 NS:f:39.95
2: VBT43:00087:00949 18 NOTANAC|HIV 110 255 88M * 0 88 TTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAA (333<<6>>1AB:7;.@F><A9=54)998>2<=B4CCAA<?7??6>>>1===09<<>AB?BCCIB=AACBA:BBBC;:9;CBB+BBBB AS:i:4181 NS:f:41.81
2: VBT43:00095:00911 2 NOTANAC|HIV 978 255 113M * 0 113 AGCAGAAGTACAGAAGCAGGAGCGAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATG BCBDCC=CCCBBBC?DDBB=BCCA?>383:;AC?KFCF@A???7??9AAAC>BBBC=BBB:B=AB<B??ACBB7B??9?AA5A??@97888+9BAC:?@BBCC8@@>??@9?? AS:i:5166 NS:f:51.66
2: VBT43:00097:00942 18 NOTANAC|HIV 934 255 107M * 0 107 GAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAA /4:4@@@CBBCBABBCCFFD>CBCDC9BAAA:*9959@B<C=CCBC;;;@FFCCD?919:::8AA>>8:2:3A;CA;999AACAA9BA:AA<A?8???A:??9C@;A AS:i:4896 NS:f:48.96
2: VBT43:00060:00976 18 NOTANAC|HIV 1 255 129M * 0 129 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAG 7GD:599BC>CCB=BBACBBBBDC=CCCB7BBB;AA=?@;KK>C@BC?FAB<C;CC8CC::09*9996>>9>:A9577CA@B3BBAC4BA@@4@ABCCB<BBBDBB:BB:CCCECCF:6888B/CCAAB AS:i:6064 NS:f:60.64
2: VBT43:00087:00963 18 NOTANAC|HIV 1 255 30M * 0 30 CCCATTAGTCCTATTGACACTGTACCAGTA ;BEB=CCEE?CCB<BA;::E?<??9;;??6 AS:i:1446 NS:f:14.46
2: VBT43:00088:00957 18 NOTANAC|HIV 1025 255 125M * 0 125 ATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGAAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGG 9:>9>>?:2::9BB=BB<BBBBA5AAAAB;B5CC////?>4NGKFDCFD?CDEB?DCCDA@@A;;:AB@;,;:::;B<M@MECA<CDEEBAA:+::99BC<C>998?C?DCFBCCCD93;7=B;C AS:i:5740 NS:f:57.40
2: VBT43:00055:01032 2 NOTANAC|HIV 168 255 70M * 0 70 CAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAA BB<AAABB>BBABBF<CDAB>>>:AFGFF4D>BB;ADE<AAA:@A;@AAA@4>;ABBAB:??9??><<=( AS:i:3058 NS:f:30.58
2: VBT43:00056:01041 2 NOTANAC|HIV 189 255 107M * 0 107 AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTCCAATTAGGAATACCACATCCCGCAG 55':2::3;CEEECCCEBBAC<BC<A????4?<???@?7993:?@@AB;A@;A;@?9??AB8@@<@165CC<BAAC9C=BBB=B@B=A?:?<BAA<A>==>B199BB AS:i:4415 NS:f:44.15
2: VBT43:00098:01003 2 NOTANAC|HIV 362 255 138M * 0 138 ACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAA ;AAA:CBCB=BBB<BC=CCCCBBBB???8?D=ACBB=@@BB@??D<::;;CCDCCCC<CDD?EC>CCBBBABEECEDC=CBCCAA<A=BBBAA8A@D<AA7A;B@A>>8>AAA;@>>8>;AB6B=<>@@A?<8::;;, AS:i:6779 NS:f:67.79
2: VBT43:00053:01062 18 NOTANAC|HIV 881 255 43M3D14M * 0 60 CACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAACAGGAGATCTAAAAGAACCAG 6933084199::2::?>A;@@@A:4;99<C?>;3;;//)//::::=4????<A<B77 AS:i:1627 NS:f:16.27
2: VBT43:00056:01063 2 NOTANAC|HIV 305 255 40M1D152M * 0 193 AGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAA <566666&6:>>?@:@DCBBBBB=BCB>>=4=>BBABC<?;=;3?C=C>C>CB=A@A77739??A?ACB;@;@A>>>B><;766+9G<BCCC>B9::??>A9::4:CCCDBBC=DDF>BA<ABBC???CCCCCC=BBBB9969;B@=>>5=@@7>>5><C@@@D8@<?@:A==7=7==2>AA>>>BDB8765 AS:i:9036 NS:f:90.36
2: VBT43:00062:01066 18 NOTANAC|HIV 369 255 21M1D35M1D80M * 0 138 CTTCAGGAAGTATACTGCATTACCATACCTAGTATAAACAATGAGACACCAGGGATAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGA ?9<>=8:1::B>@B?>;</+//9CEBFAAA?C@<8)9889><?AABCB<B=1::///AABBCBCDCBC?HCABCA;@9DIDD?FCA@;:3::2AABC?=BBCC>@@?<A<:3997<<BDCCBD:(66665;6<>A< AS:i:6122 NS:f:61.22
2: VBT43:00064:01072 18 NOTANAC|HIV 936 255 94M * 0 94 ACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATTAAATTTATCAA 90==:9:>::5CCCC:9:8?:77@4AA>>:,::::991A;?::::99;@@AAAAA=DDCC=BCCF@F>C<C=:;5CD???C;C6C:*:::>>0< AS:i:4116 NS:f:41.16
2: VBT43:00075:01080 18 NOTANAC|HIV 1046 255 21M1D14M1D57M * 0 94 TGAAAACAGGAAAATATGCAAAATGAGGAGTGCCCCACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCAT HE4BBB@?<9)9999=A>9)9997<>7599@?1@@@@CB?;;:@A@:,::::2@9B9@@?;2;:;::BBC7CCCA@?=C<@@::89B>AA77 AS:i:3461 NS:f:34.61
2: VBT43:00083:01091 2 NOTANAC|HIV 517 255 142M * 0 142 AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAA ;;5=>:=7?B<BCCCBCCCD<A@?9BA??:@BCBDM@AB?:::,:@AAAB@?:????BCCC=CCDK?DCCC:BBCBBCCFD;:::::*:BB@B;A<AACCCE;:89A@??9918>9>:999+9>6<<>@???C;><>77788 AS:i:6601 NS:f:66.01
2: VBT43:00089:01084 18 NOTANAC|HIV 423 255 60M1D14M1D31M * 0 107 GATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAGTAGCATGACAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAG ;/)//77=?>>;=@AB>BD@A999C?BB??:FDA@;;3::3EECCB<AA::2::>8>8:1::??@:::@>=/????B<???AC<?5???@B1BCA:,66699;@> AS:i:4494 NS:f:44.94
2: VBT43:00090:01087 18 NOTANAC|HIV 756 255 40M * 0 40 GACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAAT ::669988>@@<99:::A:2::2::?>,>>?0>>7:+559 AS:i:1922 NS:f:19.22
2: VBT43:00073:01128 2 NOTANAC|HIV 554 255 103M1D32M * 0 136 ATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGGAT BAAABE:EBB@BACB>C:;;CAAC<BBCC<CCCB<AABCCABBB@DBBBB/BBCBC>C>CCC=BBBB?BCA??>@;@A<BCCDD8??:?A@A@AAA:@?<77777(9?@A@>>E6AA:@8@@;BA;A:>>@A9?= AS:i:5891 NS:f:58.91
2: VBT43:00084:01101 2 NOTANAC|HIV 954 255 105M1D7M1D90M * 0 204 TTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAATATGCAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAATGCATAGTAATATGGGGAAAGAC D:@@BCDBD3CBBBD4BDDD=B<ABBBBBB<BBABBBB<AAAC=BDAA<A=D=B;AD;?ABBBBAAC;CE<A@@A<BCCC;BCC>B<BB<CAA9999)9>;.77(9=<=999:+9>@B=EACBBA9CBCBA@<@@?<;3777(9;8>;B<EEBB<@@A==<>>>>.>>>?:A:@@;;;;?@BAACC@@:>?:=@@/BD6@BA AS:i:8497 NS:f:84.97
2: VBT43:00086:01119 2 NOTANAC|HIV 243 255 104M * 0 104 TAAAAGAACTCAAGACTTCTGAGAAGTTCAATTAGGAATACCACATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATT 7;;=3;B<ABAC=DDBB=CBABBC=BB<BC=D>CC<A<B>A<B@BBBE9BBC=C=CCBCBBA0>>>???0?AABCC=CCCBBB>>>AA?>>>7>A<=>?@BEE< AS:i:4844 NS:f:48.44
2: VBT43:00087:01101 2 NOTANAC|HIV 1645 255 36M * 0 36 GATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA ??>BC<C<BAECBCCBDBB8=8=AAB=CBAAC@BB> AS:i:1659 NS:f:16.59
2: VBT43:00093:01114 2 NOTANAC|HIV 1 255 51M * 0 51 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGAT HB:BC?DCCC=CCB<AAAA@BBCBB;@C9988285=>8??;@@9?<99-:> AS:i:2472 NS:f:24.72
2: VBT43:00071:01154 2 NOTANAC|HIV 390 255 108M1D47M * 0 156 TACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA 3776<:78:>@@BCBBE<9869CCBBCBB<A@B:@A<A@BB?C@@;=;5414====A:@<AB???7?@@8??9?<CCCCD<BBBA<BCC=B=BB;B@@BBCBBA???>2?AA5B??8?8>??,:;;;:):?@?9AA9??B@??A==5??A299@A AS:i:6954 NS:f:69.54
2: VBT43:00093:01159 18 NOTANAC|HIV 858 255 147M * 0 147 CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAAGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGG ;/;;;<;<;3;;@@<CCBCCBA:?>@81779CCCC<BBA@@=BBBCC>CAA<D>>9)99999>9>@A:3::@1?@@:1:2??A@CCCC=CCDCCGB>AABA:+:::9=/AABBCC=B=C878:;8=DGBBBCB=CCAA:>=:/+/+; AS:i:6436 NS:f:64.36
2: VBT43:00098:01155 18 NOTANAC|HIV 591 255 40M * 0 40 GCATAGAACAAAAATAGAGGAACTAAGAGAACATCTATTG ),6==?9C@2BBA>??CB=B<GCC=CFCC>DDJBCBC?BB AS:i:1927 NS:f:19.27
2: VBT43:00098:01157 2 NOTANAC|HIV 1 255 43M * 0 43 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAG EC9AA<BCEC=FBB<BBBCDFDFFC>CCCCCC8B=BB:??=BB AS:i:2047 NS:f:20.47
2: VBT43:00077:01225 2 NOTANAC|HIV 706 255 214M * 0 214 CCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACA C<BAAAAB<BB>BBBB??BBEC>DFGCCABBBBC<BAEFCC.>>BBAB?A8A>>>@BB;@DEDA@ACAAA9@@:?@<:9:+56+5:DE6A9>>2<<5=<=<9455+7??3AAE5@@9@B6@?@AA/>>9>9@?:::AA@@>>A8@???+4/46>D5><<@@@9?>??9@@A>>>A9<<:D9@@8AAA@244A<<6=>=;;6;;;8>>7778+8? AS:i:9984 NS:f:99.84
2: VBT43:00091:01246 18 NOTANAC|HIV 475 255 151M * 0 151 ATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATC >>7191?6?@?>>@BA@===-===9)99999.8/?1AAA-AAAA@@>1>?=7=:@AA@?><6<@3AAAAC;@>;>BB<BB@@9/888>?AABA;BABEBCBC<?<9,558>4@A@??B@7399>9*:::959:A;B9BABBBAAD=BCABC AS:i:7108 NS:f:71.08
2: VBT43:00069:01271 2 NOTANAC|HIV 909 255 56M2D76M * 0 134 GGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATAGAGCGTATTATGACCCACAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGA C=AB====3=??B<D>?<:>9699+:>8?>EDEBAA@ABACCAA=81797:::,98::,4<<=<@<BBBDDDC?DBBBBBD@@@@?8?ADA;D;A<A=BB=BBCDBBA@@7?<4;;>=5=?990999+9:?@ AS:i:5545 NS:f:55.45
2: VBT43:00076:01276 2 NOTANAC|HIV 1 255 126M * 0 126 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATGAAAGCATTAGTAGAAATTTGTACAGAAATGGAA CG;CB=CCCC=BBE?BBBBCBCCB@9<95555*99AA:BB<AA:A=BBFDBB>BB:IEE8BC=BC<BA<ANAC>CC<A:::A@:>>7999/9?@D9CCA@7?;672AA6CC:AABCCBBE9>>098 AS:i:5927 NS:f:59.27
2: VBT43:00083:01281 2 NOTANAC|HIV 1 255 125M1D11M * 0 137 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAA >>5>@:@AE?8>@C<CCBAABDAAC<CA9887'74;:6:81;=7=7>?4@>>8:8+677'7>2:;/>><?@9>6>@=CCCCCB<==9999+9>>?2ABBC=CGCC?==4=>6?BAACCBB7==.88(54;5;6=<< AS:i:6253 NS:f:62.53
2: VBT43:00059:01317 18 NOTANAC|HIV 613 255 90M * 0 90 CTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTC ?:9<<<<4?99:<<<58>7@::+??@98>>BCBB>?:A>987&773337;;9?@3==>;?<BB>B>;@:BGBC>BBB:D>:>>A?;DBAA AS:i:3962 NS:f:39.62
2: VBT43:00068:01320 18 NOTANAC|HIV 53 255 77M * 0 77 GCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAG 3)46/@BAA;A8?=<69:2:3C@;B>999D:==>?/<;;81>>>?AB=CFBDBD;CD?FFACAA881>>:49,999> AS:i:3797 NS:f:37.97
2: VBT43:00069:01311 18 NOTANAC|HIV 927 255 53M * 0 53 TCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAG //9/9===>B>AAACBBBB=CBA?A?@;AAA?>5<>>>?4IEDDBB<B<BCBC AS:i:2384 NS:f:23.84
2: VBT43:00075:01347 2 NOTANAC|HIV 3 255 146M * 0 146 CATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAA @BA<BADB>CBC=CCCCBABAAA<>::;;;,;9AA9@B<??:?=CC;@AE?CC=EDC5A?7>>,:::::2;9@?;BCCCCD=CB::::+:>>@5@AAA<ABDE@BB7??7?BBBCBCC9>>1888*85<6?=BDBB3>=19::::* AS:i:7206 NS:f:72.06
2: VBT43:00081:01302 2 NOTANAC|HIV 851 255 135M * 0 135 GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG AAC8B<B>BG<CCCBAA>ABBB=???AACC=BBBB<A=;=@?><>@@@@8??>>>8AAA;AA@@BA/@@@@5@?AA4:;?AA5?@:?9??@@EBAB<BCCCDBC;@?>7999+9??@A7A@BC:A;A@@@A@@9@ AS:i:6103 NS:f:61.03
2: VBT43:00081:01307 18 NOTANAC|HIV 685 255 142M * 0 142 TGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGG =5<<9)99099C9088>6<?>6==>>9*9999999ABCBBBB=BBBBBBCCBBB=BBB3BBBBCFMFCBB=BCBECBB=CCEBCCCBCDD>CD<AAA:,::9,=:4;4>?;>9BA?8??A@@@?7==>CACF:DCA<A<@;C AS:i:6966 NS:f:69.66
2: VBT43:00085:01305 2 NOTANAC|HIV 43 255 108M1I40M * 0 148 GGAATGGGTGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTAGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAA ?;A<BBB<BC>CD9A>A7A?8AE?BC>CH=C<BB=BACBA<5844444)9>AA1A???8;AABABA8CE<HCCCCBAA9>>1999*89?;A=DD<B>>>8>CCCC1C399A7A9@C@BC4AC9CK<<<8//.8:548:88=4=??@>AD AS:i:6647 NS:f:66.47
2: VBT43:00050:01378 18 NOTANAC|HIV 302 255 43M1D80M1D64M * 0 189 AAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA 2>>>>>-???=:::>:1:::>?;<>8::<9:,>>??A@BA:::+::::;?9>:A?9??BBA;BBAAC@CAA;;4::AAAB?>>>9+99:8>?CC=CAF////+::=9EAA@?@GD=BA5@@///==@ACCCCCBC=FFFCCC<B>DCCF<ECFF>A:AA:A?ABB=CCBD=BBA:@:;3979?=A?< AS:i:8047 NS:f:80.47
2: VBT43:00071:01385 18 NOTANAC|HIV 189 255 107M2D54M * 0 163 AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCA 8891:,988?@BABAB=E:2::95===/==91:9>>>@@8CCB@A=?9@A;A;BB;@AAA;AADA9?@@@<ACB@@=:=A=EE=B<B?8B<BBB=?>@CF>EECGBBA;)::::::)::::::=@@A;AABBDBBB=BBBA@:BCBABBBE@A@3EEEAA: AS:i:6610 NS:f:66.10
2: VBT43:00075:01383 18 NOTANAC|HIV 550 255 110M * 0 110 ATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA :7065@?@3@?@@????9199;==?AC<CDB:CBA@9A@@<:469@?6;7'8744199?:A:AAAABBBB=BA@??@@;B@<A@@3AAAA=BBBBBBBB<A?=<5&5555 AS:i:5236 NS:f:52.36
2: VBT43:00078:01350 2 NOTANAC|HIV 61 255 45M * 0 45 GTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTA 9>/:5*5:7?A?D>:;3976>>?9C?BBAA4A@BB7@A@A:@::9 AS:i:2221 NS:f:22.21
2: VBT43:00080:01356 2 NOTANAC|HIV 251 255 156M * 0 156 CTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA AA?D>DDC@<CCDE=C=@>;?F=B:=><C?BBB8=?BBCB:?>>A?9?@AA???)@@@@AA-@>====9=@A=@>>?8ACA>882<???@@><88888*8@9:4<422/4<<<??5>DAA:@@@484<A??@?<;;499,:G;BBBCAD:::?:;; AS:i:7444 NS:f:74.44
2: VBT43:00086:01351 2 NOTANAC|HIV 494 255 20M1I60M * 0 80 CAAAAATCTTAGAGCCTTTTAAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCT @>>>>/ABC=DCBEE9>>>)666669$6<<<6AA>BAAAAAAA>;@BD7B@@@9@@C@@@::>9<<;2<@@AAA@B;@899 AS:i:3280 NS:f:32.80
2: VBT43:00096:01363 2 NOTANAC|HIV 300 255 131M * 0 131 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGAT @?<;;):9::::)9?@CCD@DHCBBBAB>BBA???7?BBAACCCBAA?A3BC=B>C<994:AABBD;BBEE>C??:?<AA@@@AA@A:992:@;BCCF=C9::?:::-::2:ACCCFCC=CBC:CD>BBBC AS:i:6284 NS:f:62.84
2: VBT43:00092:01406 18 NOTANAC|HIV 1056 255 9M1I85M * 0 94 AAAATATGCAAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGG 999:9:@?:)::::::?C?::::::CBB@@@D>@@@CCAB7CB@92:2:2?ABC=FMCAAABA5BBBCBB=A<BABBB<BBCBABC?@9=?CB:B AS:i:3994 NS:f:39.94
2: VBT43:00086:01521 18 NOTANAC|HIV 863 255 127M * 0 127 CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAAAAGACTTAATAGCAGAAATACA <<@@<BBCC>BAAACBB<BBA9399:@ADC>CB=;:=CBCCC>EBB;DC?:,::9:>4B93992@@@5@@@9292BAA@DBCC>AAACABB>BACGA7AA@@@1@@A?@@?A>BAAAAA?9===BB< AS:i:5893 NS:f:58.93
2: VBT43:00078:01573 18 NOTANAC|HIV 935 255 103M * 0 103 AACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATT 6?9BCCDFMCB=ECCBCCB=B@?@:,::::>/==AABB=E=G??@@@@?DD@AAB94::AA:CBBA<B=D?C>CC=BC@??AC?:>>8CBCDB=BBBB<BA<A AS:i:4695 NS:f:46.95
2: VBT43:00087:01578 2 NOTANAC|HIV 273 255 72M1D145M * 0 218 ATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA ?=8AA395:CD=BBB@BB<CBADC:?996666&:>999<+;CCB=>;?BB>BAAA=AA@77729AAA@AB;3333(3C9B;C;@?9>;:777/9=?>6<:53:6==>>?><=<8::2:D<BEDC@DCDBCAAC9::3:??ABAAB?AAA:AA:ABBDACBCAAABF>ABA@97198??ACG8@=?087/78B@A>?9?DA@8?8838389/988222 AS:i:10191 NS:f:101.91
2: VBT43:00059:01626 2 NOTANAC|HIV 300 255 201M1D16M * 0 218 AAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTAGAACCTTTTAAAA BBCBB+@@@BBB0B99:DCBCBBCCB@B=ECBAAA:ACBCA>=595559*:A<C<C>;;8:EAABB;CBBC<AAB=B:??ABBDA@?988+9=9@BBB=B9::@>>>5;:2:BACBBBBAMNN@D?<@CCEABBB99:@A:>::9??:@<BFFEE8ABC<CB:B;@??>>7>??>7?>>8>:@G6B@?@A?@???BKEF,;;3;@@9:2::<,<=== AS:i:10118 NS:f:101.18
2: VBT43:00078:01624 2 NOTANAC|HIV 558 255 74M * 0 74 TTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGA @A4ADCB@?AD@CBCCCC?@9?CCC<EFFE<CCCCBCBCD>CCCCB3AACCB<A;ACC>@?AA:?@@@@;;4;; AS:i:3672 NS:f:36.72
2: VBT43:00095:01600 2 NOTANAC|HIV 232 255 113M1D40M1I24M * 0 178 AGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGACATTTACCATACCTAGTATAAACA BBBBG@FF<A;@?7<>A>;ABCC=CCBB<ACBC?B:A@:AA<C<CC4619AC<D@=@AA6?8@?B9B??EEFE0CCJCBB0BA@@??8?@>@@@BC<BBBBAA5>;=:;;=>8588*5>697>97937BBACD9@@??:AFE9@8>?C>>99...;@A5CA;988C<C?@?>=;;179 AS:i:7486 NS:f:74.86
2: VBT43:00063:01650 18 NOTANAC|HIV 691 255 23M1D32M1D83M1D13M * 0 154 GGTTATGAACTCCATCCTGATAATGGACAGTACAGCCTATACAGCTACCAGAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAACAATTATGTAGAC 171A??@<A??8>==68888/(//;?@CCCCBCC:4::CDADCCCED=AB?5???@DDHCFCBBBAEAAA<ABBECFFFFC?8?:1::A>6>:+99918+881<5>>=8?????A;3;==A<DC;BBC=C=C<A:176676288BBBBCCB AS:i:5851 NS:f:58.51
2: VBT43:00079:01675 18 NOTANAC|HIV 202 255 14M1D81M3D11M * 0 110 AGTGGTAAATGGAGAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAGAAAAA AC@9>8):995==9)98078A<@A>5>::::<::@?;>;?>:@@BC<CBBB;AA?@9?@@@BA<A@;??9;7;?9;:;AA8>@BBC<DHK>8666*;;;;;(6666 AS:i:3896 NS:f:38.96
2: VBT43:00087:01691 18 NOTANAC|HIV 559 255 45M1D55M * 0 101 TTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACATCTATTAAAGTGGGGATTCTACACACCAGACAAAAA (-.<@@BCC<BBCA@CCC<AB9+448>4ABABBCC?:::@A/@AAAA@A;D<CA>@>?BB=@@?@BBB>@:AAAB4BBBB>DDECBEED?CBBCB4DDDB AS:i:4243 NS:f:42.43
2: VBT43:00094:01680 18 NOTANAC|HIV 1066 255 53M1D15M * 0 69 AAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAGATAACCACAGAA /???>=>:@@@C?5>>=A?9:5A>?>A>92:::::A<B<FF::5AACAB@?:,:::AC<C????A;7; AS:i:2667 NS:f:26.67
2: VBT43:00053:01704 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA BB:>>8>?>;BE=CBE8>877177>@@9:::BBAC9?9?AAA<BCCBBAD@: AS:i:2386 NS:f:23.86
2: VBT43:00083:01743 2 NOTANAC|HIV 438 255 61M * 0 61 CAATGTGCTTCCACAGGGATGGAAAGGATCACCGGCAATATTCCAAAGTAGCATGACAAAA 972:9<A::39<BD???4>></99)45<;@AC<@;884:BA<F;@A6778@;;>@@==>>/ AS:i:3112 NS:f:31.12
2: VBT43:00099:01701 18 NOTANAC|HIV 86 255 29M * 0 29 AGAAAATAAAAGCATTAGTAGAAATTTGT @?1===5(6677@B>BBDCCC9BC<EDAA AS:i:1357 NS:f:13.57
2: VBT43:00061:01797 2 NOTANAC|HIV 202 255 77M * 0 77 AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGG BCCG8:::+9?9>5555(8;>?<??9::-;BB:::>AA:A<??9?@?C<C@A@:=>::2:?>>6@9::29D2:/9?1 AS:i:3678 NS:f:36.78
2: VBT43:00080:01797 18 NOTANAC|HIV 736 255 128M * 0 128 CTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTTATCCAGAGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGC ;>:499:->>>>=:<??>D=DBB?:=:2:::BACCBCA@:A:1::?>>>6=4=9/61AB>C:DEE=B?A@DA:3:::B;999AA9/:1:1::+:::;9:299CA:99BCDA:156(555/>79)779? AS:i:5742 NS:f:57.42
2: VBT43:00089:01765 2 NOTANAC|HIV 419 255 139M1D45M1D26M * 0 212 CAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACATCTATTG ABBB<CB@BB??9::CBCCDD>FDBCBC=B:??AAA9>@@19927;ABA@C<?AAA;BAA:@9@A6@@@@@@ABB??@@?,???9?97772788+9::<?*?;;;2;A:CA@@@@@@@8::8/9:=?7?A@@AA;AA?77/8@::;>=?6=788=@;;3;>==0=878(7:9:A???A:>=>>.>??98.5.6>?=>>?A:>>>@;995- AS:i:9450 NS:f:94.50
2: VBT43:00065:01835 2 NOTANAC|HIV 396 255 41M * 0 41 ACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGT 7?8?>??B@;>9::4:?BA:::?9?EE=FF@>??B:::@99 AS:i:2094 NS:f:20.94
2: VBT43:00080:01832 2 NOTANAC|HIV 1 255 83M * 0 83 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA BB9??8?C@A;???9:::@??BBA@8?>>>>>1>7::199=BD?C=CCCB?>199+:::+:>9?C<CC=AA<A:AC;@?::4; AS:i:4011 NS:f:40.11
2: VBT43:00081:01825 2 NOTANAC|HIV 470 255 134M1D20M * 0 155 CAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACAT >B@772:?@<C=BF?FCBCBBBB>99999*:@A4ACC;@;?EE7BECBB0FCCC;@@9@:::EAB>>8?@A:AEHH>BEDF@@9>>?:99,:>@@@@:;2:??>BA::29>??5?;::,:>>???FCC=CCCC8BCB::3:<AAAEAB>>7@@< AS:i:6854 NS:f:68.54
2: VBT43:00088:01838 18 NOTANAC|HIV 458 255 45M * 0 45 GGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCT -9)991AAA:;;CCBB?CAA<C=B<CBBBBBCBCCB;*:::::>> AS:i:2342 NS:f:23.42
2: VBT43:00052:01852 2 NOTANAC|HIV 1 255 184M * 0 184 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTG :>4AD<BBDD>CBB;BAB@@BBBCC9<;5555*85<<:@B;AC=D=A@;AA@:?A,:99+:?;BD=EE=AA;A8??9?BBFCC=BC????5?CEE8GD??9?C@>>>>*99+:AAAFCCB:BA2:::+:9@;B>DFDC3BB;CCEEE3C9?>4=4<<=??2@A7AA>>>7>@@>?9BB9656+6 AS:i:8956 NS:f:89.56
2: VBT43:00054:01870 2 NOTANAC|HIV 883 255 31M * 0 31 CTAACAAGAGAAGCAGAACTAGAACTGGCAG 5551:A;A<??=BBABB<BB?::3:@?49<5 AS:i:1308 NS:f:13.08
2: VBT43:00059:01889 2 NOTANAC|HIV 1040 255 116M * 0 116 AGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAAG 9::2::>>>??1=9=1:55(6=B@:;:::*;@::1:@@@@@9AAABBB<A@BA;::::,:>6?:A<CCBB<BFCCCEECDD7CBBB=E=ABBBBB;ABBCDCCB>BCFCCC8CC<C AS:i:5478 NS:f:54.78
2: VBT43:00061:01851 2 NOTANAC|HIV 1630 255 51M * 0 51 GGAAATGAACAAGTGGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA >/:9*9:@:>?9?BB=CBCE<E;@?BABBBBCCC=A:@>75/9@A>>>C@B AS:i:2333 NS:f:23.33
2: VBT43:00064:01892 18 NOTANAC|HIV 1628 255 53M * 0 53 GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA >:,::199:8??<CBAA@::3::4ECCCBA:9:996<89:::>CCADAA@>:: AS:i:2449 NS:f:24.49
2: VBT43:00076:01869 2 NOTANAC|HIV 43 255 100M * 0 100 GGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTT 5/5/6>7>@@9@@-:::(6>4>=46829D=EA::6:???BB<BBAAAA1BB@?1?>::16;6999:*:>5?CCAC??>4>A2:::+:6>6>6>>>>->>9 AS:i:4879 NS:f:48.79
2: VBT43:00076:01886 2 NOTANAC|HIV 726 255 57M * 0 57 GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGT 799?@?ACABEC?=8>::999*:??@AABB<CCCCCBB;A>>?A@BA@@?8981/=: AS:i:2805 NS:f:28.05
2: VBT43:00081:01896 2 NOTANAC|HIV 238 255 74M1D48M * 0 123 CTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTA BB<B<AB<BCB>9BA9518?9:37@B@BC=AA:AA9?6?@2929??8>CCBBB;CCCBA6A::::::);;;;;*6=@9:6/7A?;=ACC=BBB@@@9@???ACC@@>CCC1BB<C?C=CB<@ AS:i:5361 NS:f:53.61
2: VBT43:00053:01935 18 NOTANAC|HIV 978 255 75M * 0 75 AGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAATAATCTAAAAAC =957=6>>988@A:?AA@<AABB;C=C=B<A@<B>??@@BB9AB;DCBCB=BCCCADE;A@<::2::<5'::::: AS:i:3454 NS:f:34.54
2: VBT43:00055:01942 2 NOTANAC|HIV 478 255 182M * 0 182 TTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAA =:?=BB:AABBBB><<66666*;AA5DCC>D9???,:::::&9>AA:CD>CDBACBDDD<AAB<BBBB=BABBBB>BAAAAA:ABBC?>CD?C899CDDD=BBBF<DBAA;BBBBBBBBB899889/9BBCC>D=BBBA@AAA;BBA>>;?9?;5>>>;>1<=6=A@@BBBB;B??ABDDDD AS:i:8367 NS:f:83.67
2: VBT43:00063:01947 2 NOTANAC|HIV 339 255 190M * 0 190 TGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCA <CA><66669(6B<C=K>??9?@A<@@:?BBB?CBB<B<BABBCDAAAA?>9>>:ACAA;?>A?9::?6::2:@@ADCCE<EBD>CC=ACCDAAACCBCCB?BCBC@@;@<CDAAB8@AA7>>5><@@@<@:@?@?:A;;6;:@@6???@@@BB@>=<;;*;@A9A??8848B@-@?@BE*@766+5907 AS:i:9120 NS:f:91.20
2: VBT43:00068:01919 18 NOTANAC|HIV 418 255 26M * 0 26 CCAGGGATTAGATATCAGTACAATGT ;A/(///)//:<<ABCCCCCC?CEBB AS:i:1335 NS:f:13.35
2: VBT43:00078:01905 2 NOTANAC|HIV 625 255 168M * 0 168 CTGTTAAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAGCCTCCATTCCATTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGAGCTGCCAGATAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTA B@AB9?7=:9666(9?;2@BBB@@@7;:=955599):>>>>;;;3?BBC<BB=BC<B<BB<B=BBCC<B;C@@@<@AA<BBB=B@A:::4;D<CCEFBBCBCD>BBCDDECDBAB=C@?99929@@?@ABC:A@>>=>@:DCC??@@>>;>8?>9==5667':>4>:@ AS:i:7631 NS:f:76.31
2: VBT43:00085:01949 2 NOTANAC|HIV 382 255 116M1D105M1D19M * 0 242 ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACA BABACBBB8BC<CBBB>A@AB?@?D<:96:AAADCCC>BEC<CC=ADBDBCCBBBBCB?BABABB<B;>?@@@5@BB:A@8>:A<88>;A@@@9@=<5<7<<2>AA>>?B??7876'4;>8>:B8848AD/BABAA*?765/5?8@@@@@@@CB:;;:28=@A9@@AA@@8>89544+5>:<=>=>7>;;;?@@?8?777(7777+7@@AA>>>D9??BB/A@A;;5;:@????;;;8>? AS:i:10982 NS:f:109.82
2: VBT43:00086:01916 18 NOTANAC|HIV 308 255 37M1D31M1D30M * 0 100 AAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAGTATACTGCATTTACCATACCTAGTATAAA )99999==BB<CB@AA@>>7AAA977;AAA@=><868+999::@:A=B?;??BB@9@A;?;8::;8///==>=BB::;9CCC<BBCE?ECBBA?<,99 AS:i:3724 NS:f:37.24
2: VBT43:00090:01926 18 NOTANAC|HIV 316 255 29M1D175M * 0 205 GTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAAC ;;8?@A987;;69=<=:+:::B@>ABB??5DCCA;C<A<B:7;:AB?7@@@BB<CAA;A<@@DDILBB@@9,:::9ADBA<AA@A?CC;CA?9?>=??@B@<A=1;;/(//AA@BCCCCCCC=CDCCC?<C:CBBC>DBBA<:3::3CCCDB<BBCB=BBA?E>C:IFBCBBAA=<=6*::99+>>;>@=C=A4AAA0CEECCC AS:i:9300 NS:f:93.00
2: VBT43:00095:01931 2 NOTANAC|HIV 626 255 160M * 0 160 TATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG 8??>BB=BBCB;ABF?CCAAABBB=CBABBBBBA+A@@@@BBC:B?:=:@B<CC=B=DBBB=CCCC<B;??@A<ABB;ACE<EA@=>>47:4><===:>:=>;CCDFFC????>7>BBAAB1>>>@A==@;A=?>???9??@A<=<AAAD9@@9?8999( AS:i:7127 NS:f:71.27
2: VBT43:00098:01928 2 NOTANAC|HIV 173 255 33M6I99M * 0 132 CTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAA BBB<@@BBBB:BBBAABJ<CCCCB/A8??7?ABBBBBAA;@BB;BB=<;;;*/-4::>BDBCB<BDC???:??9?<AC=BBCC=BBBA=BAAA<AAAABD=BC=CC=C>DC?C<BBB<CBBBCG9@@889)9>??@BB AS:i:5357 NS:f:53.57
2: VBT43:00053:01968 2 NOTANAC|HIV 599 255 112M * 0 112 CAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGA BBBBC4BBBBB:>:?BBCBCAA<ABBCBAB>CB<AABBB89937B@?@C@@;@@?@E@@@C-A>=577;B6BA:@9?@<CC;B9@A@@8>???3?8;;;@;A?>8?AB:@75 AS:i:5093 NS:f:50.93
2: VBT43:00066:01963 2 NOTANAC|HIV 19 255 68M1D40M * 0 109 ACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA ?@AABBB?::;BBB1A;9:5:D9BB>C=BB<DCI>DG4:;:,:A;AB;CF>DC=B6::?DCCCCC?:::::*::::,:CEB;?@?A@>A+992:?>A@:::,:>2::3 AS:i:4990 NS:f:49.90
2: VBT43:00081:01994 2 NOTANAC|HIV 272 255 73M1D76M * 0 150 AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAG 72:9@>9?9??B8@@ACBB<BBACD<C99::::&:>999<+;AAA??9?@?ABCBB=A;;777/9BABAAA;3333(3<7A:C:@@9@<=77729???8?>;/706>@A@?>??9::3:D>BBBC>FBBBB@?C9::5:DDCCC@@:?@ AS:i:6684 NS:f:66.84
2: VBT43:00051:02023 2 NOTANAC|HIV 858 255 53M * 0 53 CAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGG 777195A?=>;?BBB<CCCBBBD>CCAB;A=9?BA?<?>>>@:A???@:B@?8 AS:i:2353 NS:f:23.53
2: VBT43:00065:02028 18 NOTANAC|HIV 1073 255 21M1I27M * 0 48 GGAGTGCCCACACTAATGATGATAAAACAATTAACAGAAGTAGTGCAAA .=>?AB9H:89>AA9E>==@9:9/??>91:2:2?>??<CBA>>;<6-:: AS:i:1875 NS:f:18.75
2: VBT43:00066:02013 2 NOTANAC|HIV 1 255 89M1D39M2D21M * 0 152 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAATTTCAAAAATTGG CF=BB=BCCB?BAA<ADAAABBBCB;@=;;;;/<4?@;AA<AB=C>CC=BBC:>>,:::+:D9?A7??9?>8@:@@?EELLFD?EC:::,8???5BCBE>DCBCCDD8>>5>@@@AAA@7?B199378D8B/777'7=09>?@@1?:A7 AS:i:6162 NS:f:61.62
2: VBT43:00075:02041 2 NOTANAC|HIV 891 255 131M * 0 131 AGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAA BBA<CEBCC>CCECC=CCB<DA:999+:>>?6@B@@9>>>>>1=?;B<B@?>DDCE@;::CC??9???9999+9:<<=/?BFE=C=FC:=;DB<CAABBBE<BBAB:@@@@9@:B:A:BD<B>>8;8111+ AS:i:6019 NS:f:60.19
2: VBT43:00080:02033 2 NOTANAC|HIV 445 255 53M1D105M1D30M * 0 190 CTTCCACAGGGATGGAGAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAATAGAGGAACTGAGAGAACATCTATTGAAGT AB=C=BBBDD@DCC<@CBB>BCA@A?CBBB=BBB=C=CC;CBBBCBA?>8888*9>>8@@??@5;;;/<>>>>->>>>4>@9@@AC@@@@@:@@@5>>>D8@9?:AD9<89555(7==::;;;2:???ADLFAFFFG>DC=C=CCEDFDCEC=BBCC8CEB::6:=CBCCAA@>7?A?==9919><@? AS:i:8045 NS:f:80.45
2: VBT43:00084:02011 2 NOTANAC|HIV 346 255 158M * 0 158 TTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGAACAAAATCTT 999*6?<A<C9895:@B@AB:CCB?<BCB9?9?BAAAB@@@:99+:B;:;:B<B????@=A7//+/>>AAAAG>DCCBCB<CBABACDBCCBA@3::???B<B=B@???5>AA2::-:;@ABBB>CCAB;>==7=<AA:CBBA@?=8919===1:;>7 AS:i:7372 NS:f:73.72
2: VBT43:00086:02038 2 NOTANAC|HIV 618 255 129M1D35M * 0 165 AGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTTAATGACATACAGAAGTTAGT BBC=BBBBAAB=CI9@9999+:A<CBC??@BB=B@@A@@@@A0ACDCDBBD:::5:<AA=BC?B<BBBB:AAEE;B<BABB;DCD=CAA;AABBCD<CC=CDCDDCCCCC=;:;BB@@ACBB=AAABB8BBAA????7<<@@A<B<AAAAAABBBAA=CC<AA? AS:i:7136 NS:f:71.36
2: VBT43:00087:02008 18 NOTANAC|HIV 422 255 40M1D107M * 0 148 GGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGG 4:6/666697<<><@A>8>>=<<<694::66*:::>9>8@9ABBEC>GFCB=::::@9:3:::CACBAA?>9*9999:@;ABCCA:@4@@>->>>>>>B:BCC=KAA@CAA??9BB:A@@A:2:7?=>@:???CB=ECCCCCBAA:B AS:i:6747 NS:f:67.47
2: VBT43:00075:02096 2 NOTANAC|HIV 403 255 88M * 0 88 ATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCA @><B68829A>=>@99/:::,5>5?ACCBA;;:=?AA>CGEBBA>C=BBAAD;BAB37737;ACCBC<@@9919?=6=9>>4><<<>8 AS:i:4533 NS:f:45.33
2: VBT43:00077:02099 2 NOTANAC|HIV 449 255 109M1D45M * 0 155 CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA 779??<0>>B2:93:2:6:??9??@@<:::=C=CF>BCCCCCCBBBCFCC3CBB8BAB<B>CCA+:::::):>>?7?C>CFFBBBBCB;@@G;CCCD>H;;:CC=ACC::3:@?=>=::2:::9::::9??>?7>AAB;CCBFGAA>=65565( AS:i:6981 NS:f:69.81
2: VBT43:00085:02091 18 NOTANAC|HIV 226 255 70M2D76M * 0 148 GATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCA =>6??>;>BA<B?9?9@@;BBBC<BBA?6ABBB<CBAB<A<AA<CC;A<BB<>:>>A;:;;AA;AABB9:::)::::::)::::::ACA@;CBBB@BBB@BBCCBB=CCCBA@CBBF4ECCFC>B=C>CC>ECCFB:@AAA@8==8 AS:i:6293 NS:f:62.93
2: VBT43:00097:02073 2 NOTANAC|HIV 11 255 73M * 0 73 CTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGA BC??9?B??@CCBDB;AAAACC8H?DC=CC>CC=F=??:?A@6>;*6::(6A;BC5777;?6?<BB>CABBCB AS:i:3656 NS:f:36.56
2: VBT43:00090:02128 18 NOTANAC|HIV 335 255 10M1D119M * 0 130 GTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG FBBECC@??:+::::;A<F?E@;AAECC?GCDDB<EDB;>:A>AAAACAAA?5>>><GEC@:?BAB8885>>@9ABBA@@@B=C<B;CB=BAAABBAAABBBB>ABBBBB>B<DBBB:CBCB>A:AA=B AS:i:5642 NS:f:56.42
2: VBT43:00099:02118 2 NOTANAC|HIV 685 255 62M1D23M * 0 86 TGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACAT CC>BBDE>C=BB?=9@BA:@??8>@A:::4;@8?EB@A???::29@CBBBBA???8>@??@399B@@A@?8??:::@@<???AB8 AS:i:3681 NS:f:36.81
2: VBT43:00103:00093 18 NOTANAC|HIV 726 255 129M * 0 129 GCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGG :5A<>>9?>;>D9198<-=====@A:67@:B>?@A981@>>999BBBCE<CC<C>>>8CB5@@<58)891>4>??:CFB?>>9+99991::=CCC?C<B<B@5A@@>;?9??CBBCFCCCCA<AB4AAC AS:i:6124 NS:f:61.24
2: VBT43:00109:00068 2 NOTANAC|HIV 102 255 34M1D72M * 0 107 AGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA AA=<666,9:,:@@:::BA4BB1999+919191999/9@7AABAB3?8=>7>8>9999+9A7A29:?9?AACC=CCB@??9?AAABCB999999*91:9,:CACCB AS:i:4154 NS:f:41.54
2: VBT43:00111:00062 2 NOTANAC|HIV 1629 255 19M1I33M * 0 52 AGGGAATGAACAAGTAGATAAAATTAGTCAGTACTAGAATCAGGAGAGTACTA >>>4<8?>;7<>7>@=<<9555+89AACBDCCCBAAAB<@@AC=DBBBB988. AS:i:1847 NS:f:18.47
2: VBT43:00115:00058 18 NOTANAC|HIV 471 255 50M1I83M * 0 133 AGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACGAAA >>:2:;?<C<?:???>=>6666;;+>>>@4BBBDA<A<B4BBB+DD@BBB9*:9::8?>@???BBB;A?9???CB<BBBB@:2::?>>9ABBB999@A;BA@@BAAA:??9+889>5???BBBCBAB<?=:/77 AS:i:5823 NS:f:58.23
2: VBT43:00119:00068 2 NOTANAC|HIV 189 255 39M1D94M * 0 134 AAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCGGGGCTAAAAAAGAAAAAATCAGTAACAG 96*:1::*8AACGCB@>7899,:A;@::::+:;ECA;=//)/:7C<>8A>8?:AB<ABCC=BCCB<B@::2:??==?;>>89:29<AA;A<@@@:@@896;3955@C.>??ABBB-AABB@@(88:9?=7;>: AS:i:5159 NS:f:51.59
2: VBT43:00122:00075 2 NOTANAC|HIV 745 255 130M * 0 130 AAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAG CC;CCBEBBDB>EBBBBCA=CBB@BABBAA?=AA;?>A@<<+44/77>@8B<?A5@B<BCB>??::1:??:ADD3>A=C=C<@@??/?>8?:@>?@@@?=>>77.7114'54<8?C5@A?>>A:ABAA:@ AS:i:6032 NS:f:60.32
2: VBT43:00128:00076 2 NOTANAC|HIV 20 255 179M * 0 179 CTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG BA@AAE>BC6666(68=@;@B<@A;A;AA=CCC=CD9?==/991:B:BD>AA<B=CC=CCAA??>>19999*9>AA7CCBB<@DD@BBE;CC<CBBAAACA6AB2::9*99>:A>CGCC3BA9?????2@=CB<B<;??==1>>5>?>??:9:8CC<CCC@@?8;;:@477)78999(8 AS:i:8650 NS:f:86.50
2: VBT43:00133:00059 2 NOTANAC|HIV 136 255 70M6I76M * 0 146 AAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAAGAAT 555*7>:BEIII4C<BB:@:@::::*:B7??DCC=GCCBB<CBBBBB;ABB@@@B9AAAAA3A=BB;AABBBCCCB;@@?6>=8>9999):;DEECC::9+9AB@BC=CC=D;@B>ABBD<BCCA<@>FD>DCCE<E<BCACE<B;A<?>8? AS:i:6228 NS:f:62.28
2: VBT43:00134:00059 2 NOTANAC|HIV 359 255 126M * 0 126 TAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACGATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAA 7??BAAA:A@@B<BBA3739ABBBDCAA?==7?=<BAAA=B9::CDDD=AA;AAABC:99<A:A<BB<BA@A9::@B@AABA=@AB?B<B<@BCCC9???-55/56?ACCB<B=9909999>:??9 AS:i:6005 NS:f:60.05
2: VBT43:00149:00075 18 NOTANAC|HIV 302 255 30M1I161M * 0 191 AAAAGAACAAATCAGTAACAGTACTGGATGTTGGGTGATGCATATTTTTCAATTCCGTTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCCTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATG :::::7EA9C@??AAA;BBBABA@A:=<9/(/(99:>>>@??A:*:::::8>8@;BC>DCCBC<CCBCB>C:91:2::@@@A::;A9)999:??AA;AA:::@?9CC?8?????BCC?LC9BA;3;:??BADBHEIAA<KEC@@<BB=CBBD<EDDF>:5995AACDC>CCEE?BBA<B>B:BBABDBB:88 AS:i:8715 NS:f:87.15
2: VBT43:00103:00149 18 NOTANAC|HIV 307 255 78M * 0 78 AAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACT 0DFFEF???BB=CBBBBBBB=ECCCB;BBBCDCDBBCB4BBBBB=B;@<BA<>>><5,::6A;7?DE?D?ICCCE@@> AS:i:3609 NS:f:36.09
2: VBT43:00111:00124 18 NOTANAC|HIV 985 255 46M * 0 46 GTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAG 9@????7>>>>8@?>A<@9?9A;A@9?>>>;:::*671D>>@B<?; AS:i:2108 NS:f:21.08
2: VBT43:00141:00144 2 NOTANAC|HIV 598 255 106M * 0 106 ACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCC 77BBBB/ABAHB=B>BACECCCB=CA@@>>A<AB<BDCCC7AA<ACBBBBBC;>@>?>>>>>-:<<687==2??9?9@@6>><C7;;882;888/:9@>>@:;;;9 AS:i:4754 NS:f:47.54
2: VBT43:00104:00161 2 NOTANAC|HIV 468 255 205M * 0 205 ACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGACAGCATAGAAGAAAAATAGAGGAACTGAGAGAACATCTGTTGAGGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAA @>8<<7:2:@D<B?MG?BFC@ACA@@:::::*:AA<DFFCC?EDD7CCELL7@@@?5?A<@??BBBCAA:???:DDDD@FBCCCD>CAAACE<CCCCCBBC=BBBCBBBC=DCDFBDEE>CCCCBAABDC<BAFFC4BB???3:3:C@>??7917@@@@@?:@A?9AEEG3AAB<CCC>>>E<AAAACCEED-A??@@;;;-::: AS:i:9783 NS:f:97.83
2: VBT43:00106:00182 2 NOTANAC|HIV 1628 255 45M * 0 45 GAGGGAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGA CBBC<F@FCB<EE@EEDABCDD<C?CCBCC;;:@@@8?8>;?>8@ AS:i:2175 NS:f:21.75
2: VBT43:00113:00153 2 NOTANAC|HIV 1009 255 73M1D68M * 0 142 TGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCCACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGG :?8=BB>?????9?D<CCCB>B>><7995+86>>6?=9:<<?5A@B<FBC7BAAA>??@?1@@@@:@EGCCCE4BB@>8>?BB;9888):@;B?F>CCEC=BCBAABBBBB7AA@A;B68:DCCC9@???@@@@<>?>CG: AS:i:6331 NS:f:63.31
2: VBT43:00113:00191 18 NOTANAC|HIV 781 255 114M * 0 114 GTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAA :B:BA9DDC=A:AB<B9D>@;CCD>9::,::::2::9AB?<B;B=>=5<<<::B78:;CCBCBA@A:3:;7CCC=C=C<D9:;??B<BBCE=CBBBDDC>CCCC>DC<DA@@6A AS:i:5147 NS:f:51.47
2: VBT43:00116:00189 2 NOTANAC|HIV 564 255 116M * 0 116 TGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCAT <ABAA<CDDDBACB=AAAE>EBCB:BB??ABECC>AAB@@1@@:9:=C=BECBBCA@9ABB===@7>?9@ABAD3?=3447?@AAF<CB@BAAAAD-A?::;@@?3>?8=6<<3>> AS:i:5544 NS:f:55.44
2: VBT43:00117:00184 18 NOTANAC|HIV 423 255 123M * 0 123 GATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCA 9/'..@>?@BC??>>>:FFBA>>9@7=@AA9BA?@99)880>>>=B<CCB@:CA@:<46+767@88A@=:8>-:;>;::8599BC=E8EEB0BCBBAA:2999;ABBCBDDBC9?>9>>>@E? AS:i:5931 NS:f:59.31
2: VBT43:00118:00165 2 NOTANAC|HIV 283 255 62M1D70M * 0 133 CCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGA @:>BB?><7>A::6-;?>>>>?->ACDCF0CAAA??9?AA?@@@@9>=<999)9>=??@@=8444(9>6>:A=CC<CEBBBA5@A;;6;AC9?9??;;;BB???CD6@@9??AD9@:;;>?=?27.(-76:. AS:i:5782 NS:f:57.82
2: VBT43:00121:00172 18 NOTANAC|HIV 32 255 119M * 0 119 AATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATCGACAGAAAAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGAAAAAGGAAGGAAAAATTTCAAAAATT 991>91::;AD>D>BB=C@>:C9BB4BAA?:=5==?;@@:?9@@A@A??>9(8888/<<;=2>>>>A><ADCCCC<CC<BCBCCCGC<AC<5*::::2:2;2?->>>>5B@A/BBB>:> AS:i:5534 NS:f:55.34
2: VBT43:00139:00185 18 NOTANAC|HIV 189 255 107M2D53M * 0 162 AAAGGAAAGTAGTAGTGGTAAATAGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTC 6;<4608<<:99@>@C<CC;C??>@A?1>?>899:AA@@8CDCA@>@<CA;B<B?:@@AA=A???8@@?A;BB@>8>8@B=CB=A<B?:=:=@B=BCEBB;DCDE;88B+DDDDBB+EEEECBBBB@;ABAB@BBB>BBBBAA<BABBBBEBBC4BBBCC AS:i:6351 NS:f:63.51
2: VBT43:00144:00192 18 NOTANAC|HIV 163 255 37M7I96M2D69M * 0 204 CCATACAATACTCCAGTATTTGTCATAAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAGTAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAA ;;:BA>:@9::?9?@BDD>DECA@@;,::::-@@AB=B9ABB:99ABAA<CC;E??9CCC8FG@;??ADDBB;BBAAACA:@A;AAAC>ECAB<AABA;BBAA=CBBBC:3889@@<B=AB=>:B?DADDECC>NFMC///=(88;;;F+DCCCCBBFDD>CCCBBCC:399;;?:BCBCDDCBBFC4DFFBA<C<B=DA<AABBC4BB AS:i:7712 NS:f:77.12
2: VBT43:00100:00212 18 NOTANAC|HIV 808 255 32M1I36M * 0 68 ATTTATCCAGGGATTAAGGTAAAACAATTATGATAGACTCATTAGGGGAACCAAAGCACTAACAGAAGT 7+566>7;;3BAA<@;A;D?,????;@8=?=///<=:>>>9277/=?B=C>C<BBBAAGG>BCCC<C?@ AS:i:2562 NS:f:25.62
2: VBT43:00107:00200 18 NOTANAC|HIV 1022 255 133M * 0 133 TTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAAGCATAGTAATATGGGGAAA 0:55:99>9::=BC;CB<B:3::@@A2BBC@A;E?DEBA@BBB4GKKFDBD>CGBDB<NCC;:;C>CCDBBB?4???@:A;B=CCCC=CCBAABB@4ABBACB=A<ABBBB<CABDDDDBAA?BC</;;;3?A AS:i:6343 NS:f:63.43
2: VBT43:00113:00212 18 NOTANAC|HIV 553 255 53M1I106M * 0 159 GATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGAT 99>>9)998@>>?A:3::@@>?A>:>?D7@@6:,>>:66@ACAA:A<.?>==.'..:6:9AABBBBBC=BCCBFCB=AB<DCC9FFMC>BEDDCBBB=BBCCC0CCCCDCCC???7???<C=CC=BB>D>EBBD@?BB:BB=BBCC<BBA<ABCBCBABC AS:i:7042 NS:f:70.42
2: VBT43:00116:00227 18 NOTANAC|HIV 1023 255 39M * 0 39 TTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATA (,,,57?AAB=DE<CB@DD>CBBCC9DCCBB9>3>>@A< AS:i:1873 NS:f:18.73
2: VBT43:00129:00200 18 NOTANAC|HIV 1 255 41M * 0 41 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCC 9GC>8>>@@<BBB>BCABABCDBB<;;;6):::1>>7;>=A AS:i:1940 NS:f:19.40
2: VBT43:00134:00239 2 NOTANAC|HIV 902 255 209M * 0 209 TAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAA 27@B>CA?>BBBBDB3B>==8?BBB=BBBBB4AA<B<B@@CDCFD>BDBCCBB=CCBABBB599ABB5CBBC=B<B;>?CCB<AAABBCC<A@@A;AD;;6;9?9?9BB?DG996>9;:/:=2==>A;?@9<6<<=1;69A<<877DEF/:997=CC-...B99;;;+9?@@;BAA>>>5=995BC:==AA99877(9>:>:A;ACBCC AS:i:9792 NS:f:97.92
2: VBT43:00138:00245 2 NOTANAC|HIV 1 255 39M * 0 39 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAG ?A7=>:>@A>18=@9>=>@B989CB:A?8577'78@?9? AS:i:1832 NS:f:18.32
2: VBT43:00142:00224 2 NOTANAC|HIV 1 255 59M * 0 59 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAA AD=BB<BAAA;99:<BB?:;:??@A9??BCDD7B<AA:?@>CC=E<@@9?A@9>>)/// AS:i:2890 NS:f:28.90
2: VBT43:00101:00277 18 NOTANAC|HIV 299 255 46M1D119M * 0 166 TGAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG C?3?????0DDDCEEDDCD?DEEDDB?@8BBB?@?<BBCABA@@@:+::::9@:A=CA;AABBB;FBBAA<B<=68498>==<?:>>81888:AA@?8?AACB>>5@@@:C@@>???B=BAAABB;AA;=?B??=BBBA>CBAACD@D@BB@A9IEFF=B;AA<B AS:i:7356 NS:f:73.56
2: VBT43:00105:00289 2 NOTANAC|HIV 272 255 114M1I38M * 0 152 AATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGACATTTACCATACCTAGTATAAACAATGAGACACCAGGG =9=:@@=D?DDB>AAABBB<CB??=8?JKNKGK0BFCBCC0?;ABB@:@A@@@BBCAA>@>CC?BAA@57:@:::::*:A2:1:;B>;BBAABE=BAA@<A@A<@B;A>99<..////9/=?:AABB<BA@@:99>4<<6<>D899BD<FCA4 AS:i:6586 NS:f:65.86
2: VBT43:00108:00260 2 NOTANAC|HIV 143 255 63M6I87M1I21M * 0 171 CAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGACAGGGCTAAAAAAGAAAAAAT BBBBC4B<CB<C=C=;;;4<<4@ABAB=DBEDB@BBBAAA<ABBBBBB<BAAAA/@<@A:BAA>>>@@@8>??5B?8<::::,>9B???C??=8?CBBBB=BB=C<BA;AABF8B@A?<AACC<ABAD;C=BC?CH<C<BB<A<DBB;B@@::9--..:89/;@@@@@F*?>>;@@-> AS:i:7081 NS:f:70.81
2: VBT43:00114:00297 2 NOTANAC|HIV 306 255 146M1I40M * 0 186 GAAAAAATCAGTAACAGTACTGGATGTGGGAGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCAT CABBBE0BA?>795:DDCBDBD>DE@@;:.//<<;;;DAAAAA/BC<B=B<@A:=;ABBB<CBBD=BBB=D=DBCBCCAAAAAA:BC<BBCB=BABB???D<996:BBBCCCC=CEE>999:CCA9:9@???AA9??CCAA<?9@9909>1>?@9@C7?8;;7777???G<F@?9@;BB6776@@>< AS:i:8695 NS:f:86.95
2: VBT43:00120:00290 2 NOTANAC|HIV 632 255 153M * 0 153 GGTGGGGATTTGACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGG C=CCCC8A@@9ACCAAA>8>???CCCCD0CCCBAABB:CC=B:;;79938;AABB:AACC8A<A889<CCC=BBB9>?@97717B<CBBAB?@@@@6??ABCC>@ABB:>88888)9?>?@@@@:@@@@@@@:@@?BAAAABBB<BB?FCCC= AS:i:7196 NS:f:71.96
2: VBT43:00142:00289 2 NOTANAC|HIV 658 255 89M1D25M * 0 115 AAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATAC AA9CAACB?CC<BB=F>CB<CD=B=B@AA<AAAD;B<BBBB=CEG>BAA6::BCKF<DD@GCCBBBB::9277@AABAA;::9:::>>1:>=A??@B>CA??>>>4:665:555 AS:i:5065 NS:f:50.65
2: VBT43:00145:00269 2 NOTANAC|HIV 380 255 189M * 0 189 ATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGAGATTAGATATCAGTACAATATGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAG @>BCBB@BBC:AA;@@@<<>7;;BBBB;@@:?BBBACBB=CBBCBD@AABBAA@BB??@@8BBAB@@<@;CC@AA9AGD:??8>:>>?::6;8881???:A=DC=CCAAABBABCECCA3BBB>CCBCB=CCA+:::::(:@AA9AA<AACCCBA@B;BBH8>?@A;AAEECC<CA>999*9:>;89// AS:i:9057 NS:f:90.57
2: VBT43:00102:00328 18 NOTANAC|HIV 1013 255 83M * 0 83 CATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAAAATGAGAAGTGCCCACACTAATGATGTA ;;??@>5>:-:::>=<ABBC>CB<BB=BA=BBBCC8CCCCC>F9KK;::@A>-???>>@@@<BAAA:BBBBCAC;:;:@BA>< AS:i:3936 NS:f:39.36
2: VBT43:00116:00301 18 NOTANAC|HIV 1 255 31M1D34M * 0 66 CCCATTAGTCCTATTGACACTGTACCAGTAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAA ,?>=7??BB<BCB=BBCCC;=;DD<@:;:+991?=9@A=CC=:999<A9:7B:BA7AB??9B3AA AS:i:2735 NS:f:27.35
2: VBT43:00116:00302 2 NOTANAC|HIV 212 255 169M * 0 169 GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTA C;@?<<<5<7BAAA????:?ACCA@<@B<B>BB<ABA@:@?>@9@CCC=AA@C9D?DD=BB=B;BB;A;A??:@CBCCD;B???@7@BBCCCC0CCFEEE0AABCCC=BBBBBBBD>BCB??>1>>===>>>;>>>?1@A<C;@;@D<CC@@??8?ACC<ABC;?9??> AS:i:8149 NS:f:81.49
2: VBT43:00117:00317 2 NOTANAC|HIV 940 255 128M * 0 128 GTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGAAAATATGCAAA ABACCBB<BEBCBBB899AABBB8BBFEE8CCAA;A=@@@CBBB<CBBA@@A;A8995:AAA8>9?:D9AA;BBAA>?<;;+44+4==?:@@@E9?>@6@9@@8?EFAAAA.9870777+8899?=>> AS:i:5873 NS:f:58.73
2: VBT43:00122:00341 18 NOTANAC|HIV 609 255 86M * 0 86 GGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTT 080A=>@BB??:FCBABCC=??;???4CCCA;??CCBCCC=B@?>9(666669<A>BB9?@=:>:DD?BB<C=BDDD=A?@9?>9@ AS:i:3719 NS:f:37.19
2: VBT43:00129:00319 18 NOTANAC|HIV 202 255 95M1D53M * 0 149 AGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTAGGAAGTTCAATTAGGAATACCACATCCCGCAGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTAGGTGATGCATATTTTTC BCE=BA:C??7@@?1??>9@?ACCAA8CCB@BBA9@>:=:FA;AAAA<AADA<B@@@;@AA@<@<BC=BC=B<A@8:5:?B=BBA@B9E??@/)//8(88;;;@+IIIIBAAAAA<AAABBBGA>AABBBB>A@ABBBABAB/BBBBC AS:i:6573 NS:f:65.73
2: VBT43:00132:00340 18 NOTANAC|HIV 1 255 141M * 0 141 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATT ,::;2::DC<BAA;CCCCEBCCCB>AABA1@@>8==7?@9??<C>AA:@@:4:2CC7CCCC=C<FCC=??9>7?9299>B@@=BCCB4EBBC3DDDDA?;@@@@@@6?A6AA>>>BCC=EBA<?5???9A9@9:(666619 AS:i:6952 NS:f:69.52
2: VBT43:00111:00367 2 NOTANAC|HIV 449 255 196M1D14M * 0 211 CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAAGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTAAGGATCTACACACCAGACAAAAA A>CCC@6>>>7<<7=9>A:88<CBBC<BCB;?:BG:BAEBBAA?==<<?=0?AC=D???B9???1?@@@A0BAAC9;:5;CCAAA?><5:99,999:2:>@>:926???@D:9::CBACC>A:::AADE?DDDK=EE>B<AAABBFFEE>?????->>??@;@<AAA@CA9919??999=.796=>>9?9977>>6:>>>6>9666DDE, AS:i:9373 NS:f:93.73
2: VBT43:00117:00359 18 NOTANAC|HIV 758 255 146M * 0 146 CTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTGGGCAAGTCAGATTTATCCAGAGATTAAGGTAAAACAATTATGTAGACTCATTAGAGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTA ::???;BBB@B@CCCCB?FF=@??BAC>D<DB<@9DD=C:ACC>C@??CBA:AAAC>?@?CMB;A<A<A>4E@@:7>5799A@@@BAAA7599CC=D>C>C<DDBBAC@:BBCD>BBBBCCB@DDAA;@B<BCBB=BACAB=B@B: AS:i:6305 NS:f:63.05
2: VBT43:00128:00417 18 NOTANAC|HIV 431 255 70M * 0 70 ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAAT ;<AAA>B@<@ABDD?:?:BCCB<CCCB;73573AABBB=CBBB<@@?8>7>6@@@BBCCBDAA:*66999 AS:i:3658 NS:f:36.58
2: VBT43:00145:00444 18 NOTANAC|HIV 702 255 113M * 0 113 CCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATC 7;77.77==?5H@@:;;8=88>><<:>::88-..==?9>>?0??>?????@CA;BBCBBBB<DBAB>?@A>??;@A=CCCE<CC8BBBAB:CB<;2::9;@BBBBC:+::::5 AS:i:5645 NS:f:56.45
2: VBT43:00108:00545 18 NOTANAC|HIV 553 255 53M1I121M * 0 174 GATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAG 99>?=1>>>=<?>?9299A==>>@9@AC;CC9;6C??:=?>>>E8C7+66679099=5?9@@A<AABB<BBBBBBB=DD@BBAA9?A939:FCCFCB<CCCE:)::::::>>??>4;;;6/(//8A=:C>CCCC;:99?=C<DCAA;BBD=AAD=BBBAA;BBB>DCCBBBBAAB AS:i:7451 NS:f:74.51
2: VBT43:00111:00544 2 NOTANAC|HIV 1 255 54M * 0 54 CCCATTAGTCCTACTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGC @?9?A<CAAA;A???C??9::::?A<?9;;GG8D<BA>BB<AB<A;@B:@AA2: AS:i:2497 NS:f:24.97
2: VBT43:00114:00527 18 NOTANAC|HIV 678 255 69M1D64M * 0 134 ATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTACCAGAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTT A:?6===;6=>AA;C<@@@@;@@@=A?B=BBAA71799<CEECEEFIEE>CEDCCC:::?<5?>9+9999@A?C@@>AA@BBBB=BBCCBBBBB@B=BC=CBCB<FB7BBB<D9@@;?7???@A@ACBDG<CC AS:i:5673 NS:f:56.73
2: VBT43:00117:00523 2 NOTANAC|HIV 432 255 150M * 0 150 TCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGA >CCAA@@A>BCAA??;=:@@>>@8@BA9AA:?<CC@@@?B@@>:===8@8AA9@@@>@>?>>>DD@A+9992:@A;B=CCC9BFMKF0KDCC;BB>DDCCCBAAC;BBC;BACC:@?BCCC=BBA99938A@@AACC>CCA@ACBB@BCD AS:i:7229 NS:f:72.29
2: VBT43:00124:00503 2 NOTANAC|HIV 744 255 42M1D54M * 0 97 AAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGT 666,::?AAAAC?B?AAACC=CCCCBBBBCBB<AC;AA?@A/77)84<<4;8>G6AC<AB;;;@?@34668>DD3;@>C<D<CADE4A@:@;A@AB AS:i:4215 NS:f:42.15
2: VBT43:00124:00512 2 NOTANAC|HIV 437 255 25M * 0 25 ACAATGTGCTTCCACAGGGATGGAA ::72696:>?9?:A@???49733:: AS:i:1318 NS:f:13.18
2: VBT43:00106:00591 2 NOTANAC|HIV 81 255 125M6I36M * 0 161 AGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCCGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTA DBD>BDBBBA3>>>>7A@BB=BBDDGDD4DD<BCA??@@B9@A:@@@2@8?8>:AAAB1BC9CBAAA1B<AA9FD9::::+9>4@@ABB<BBCBE<@??>==5=@A@@A@6=====-;9??9@A?A>>>>><CCC:BB<BAABB/>7==778=@A9???@>>6>>7> AS:i:6743 NS:f:67.43
2: VBT43:00111:00582 18 NOTANAC|HIV 1 255 94M1D113M * 0 208 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATAGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA +:::2::CA;B@A;DDECCBBBA:1::?:,:::2;:2FE>::9C;AB;;:A=C<DD@NNBC;?9???<@@:B<::7CB@?A@;B?@@5GB>9)9989:6>>?@@C:CC;CCABCCCC<EC?:?1>>>8>9>9:*::::,:::-?@@B;BB;A7=<6'411/ABCC?A8@@@BB<CBCAC<FDAA@AA;AD?3??=94<3<AA?AABE AS:i:9176 NS:f:91.76
2: VBT43:00118:00561 18 NOTANAC|HIV 981 255 72M * 0 72 AGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAAC <A;CBCBAAA<AB@@>BBAA:C=B<A<G?8?=998;9949;7@@ABB=BBBA<AA:AB:C?9??BB@7CBA> AS:i:3336 NS:f:33.36
2: VBT43:00132:00569 18 NOTANAC|HIV 473 255 29M * 0 29 CAATATTCCAAAGTAGCATGACAAAAATC B=BB:3:2:,99:@@AAAAACA2@@;=>9 AS:i:1494 NS:f:14.94
2: VBT43:00133:00591 2 NOTANAC|HIV 1628 255 53M * 0 53 GAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA DCB8>>9?B><CE>CC@AAA>>9><@@AABCCCB@@<@<AB@@8@@@A@8@;9 AS:i:2568 NS:f:25.68
2: VBT43:00135:00570 18 NOTANAC|HIV 312 255 33M1D119M * 0 153 ATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGG B???BA;AAAAA>?@9CA?@>5::=BBBA@?>8+:::99>9B<B?:??CBC<FBBCC?DAA:7187@@AE?@??>5??@:FDDA:>><B@:65CDB;ABBCCCAA;?@8CC?9??;??ABBB@@BB>BBBBEB<B?BBDB<DBCB=A:?@:? AS:i:6954 NS:f:69.54
2: VBT43:00141:00563 2 NOTANAC|HIV 332 255 75M * 0 75 TGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAA >CC:ACGAB?@599999*:G9?8B:??:@?BBA@9:::>6>@@;B357===;5::=@B9@>8665>8D755@>?? AS:i:3399 NS:f:33.99
2: VBT43:00103:00637 2 NOTANAC|HIV 16 255 156M * 0 156 GACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAAAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAAT CCCJDEE???<BBBBBA7A:??;?B<AA<@;AB;BCFAGD<CCD7CC<CE<CC=BB<B<CA>CBGHEB=BBCBDB9BDFF8FBAB<BBABEDD3CC<CCCBAAA@9AA1999+:9>9@:@@@@1?A4::FDC1A7==1<5;:>@A/AA6A;;:?:? AS:i:7550 NS:f:75.50
2: VBT43:00109:00642 2 NOTANAC|HIV 431 255 168M * 0 168 ATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAA CBBEBBBAA<ABBB>>:><BBDEE?ECC;?>8?=BBBCC=AABA>DCC<C>DD:@@BBBDBAA????;0<??=DEEBB<BGG7DGGGG0EBCC<BA=BCBBACCFD9@@@9===B=BACCBC=@>>===1=>>>>>AA:@:::@?CB@DEFM?D?@@9?CBCEDCFDE AS:i:8292 NS:f:82.92
2: VBT43:00123:00626 18 NOTANAC|HIV 1078 255 80M * 0 80 GCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAGATAACCACAGAAGGCATAGTAATATGGGGAAAGAC ;2>=A<?@@;CCCCCB@3AA@@=A<B<DFBC<BBBADDAA3DDA@>>7>;ABBAA<?;@@@A>;=8?BA@7>>>4>>?BA AS:i:3838 NS:f:38.38
2: VBT43:00129:00602 2 NOTANAC|HIV 661 255 86M1D28M * 0 115 CATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAAGACAGCTGGACTGTCAATGACATACAGA @A>AB96817@9?<AA;AB<A<BCCC=BBDB=D<AAA>:BCB;???5=?ABBC;BB?EAAABBBCEB:@@CED9>>>BC<@@@AA4@@>A8:;G>CA;;:AB;ABDCCC::9=: AS:i:4917 NS:f:49.17
2: VBT43:00132:00605 18 NOTANAC|HIV 145 255 61M6I18M * 0 79 AAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAG ==997><8@9>@A4BBC<GD<BDCCBCC@@=CBBBC<DGCBBD<0:>:*:::91=5=;;A?ABACC=CC<CCCACBB7DC9599B AS:i:2695 NS:f:26.95
2: VBT43:00133:00639 18 NOTANAC|HIV 469 255 71M * 0 71 CCAGCAATATTCCAAAGTAGCATGACAAAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTAT 8??<?8ABB<B<B;CBCCBBAB@@AC4DDD:(9999<9@=B4BBB-BBA@??;3:89558:::9@B9288< AS:i:3189 NS:f:31.89
2: VBT43:00137:00609 2 NOTANAC|HIV 1633 255 48M * 0 48 AATGAACAAGTAGATAAATTAGTCAGTGCTGAAATCAGAAAAGTACTA 72:A@;BB=CCBACB??6A39:AAICCCBB:9926@@@ABB7BA?@?9 AS:i:2229 NS:f:22.29
2: VBT43:00108:00663 2 NOTANAC|HIV 84 255 42M1D72M * 0 115 AGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG >969999(;AA@/B9::=BBBECDD<BD:@>BBBBAC6AA299165B9?5==<=-=@7@CFCE3C;;9:A:@????5?E<CBCDDCDCAAA499>99929A?@BBH9BBBBB1B AS:i:4951 NS:f:49.51
2: VBT43:00108:00668 2 NOTANAC|HIV 323 255 173M * 0 173 TACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACA <CEBB:??FCED<BAAAAAB9;:DDC3BB:?8>9993::???J;BCCD=@@>>D:@?BBBB???AAA9AC;ABAA=A9::@?>>5;;2:=>CBEDB;A@<6AB=BCBBBBCBBB>??=CCCCBB<@:?A?>>5>:@6AA6B:@@???4;;<A688>;A6A@6AA?=777:877 AS:i:8471 NS:f:84.71
2: VBT43:00116:00678 18 NOTANAC|HIV 529 255 35M * 0 35 GACATAGTTATTTATCAATACATGGATGATTTGTA A?@?@@A9>B:CA@AA:???DDD>BBFFC:BABB> AS:i:1669 NS:f:16.69
2: VBT43:00132:00690 18 NOTANAC|HIV 212 255 45M * 0 45 GGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAG 7666(::91::>DA?:,888>>AC=BA<?9??=BBDC=CCCC=BB AS:i:2304 NS:f:23.04
2: VBT43:00135:00688 2 NOTANAC|HIV 28 255 181M * 0 181 GTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTAGGCCTGAAAACCCTTACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTA ;9666(:;AB<DA<AA=C=CC=BCC?JG;@@>5??8?C;BB?CC=B=CD@CCBBAB9=<5555(4888/>@@B;A@?BA??1::5=AAECCEE9::39:5):181:9AAAB,>>2;;;;<,=9?@:@7B???@3@A9C<AAB=B>D>A<DBCCCC4@@FAADB8BCHHH1B8>>3>BBBAA AS:i:8375 NS:f:83.75
2: VBT43:00136:00687 2 NOTANAC|HIV 1629 255 52M * 0 52 AGGAAATGAACAAGTAGATAAACTAGTCAGTGCTGGAATCAGGAGAGTACTA BD48859>>8?@:@@BBBCCC;AAAABBBBBCA@?7;8;@@>8A@AAA;AA/ AS:i:2417 NS:f:24.17
2: VBT43:00141:00654 2 NOTANAC|HIV 789 255 92M * 0 92 ATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTAC <<2771;<BB;EF?FFFDCBCC<???>CCC:AB=B<C=;:::+:>8?<AAABECCBAA??6<688,85<8AB8??BA>>;AC@A:BC?>=;9 AS:i:4215 NS:f:42.15
2: VBT43:00144:00690 18 NOTANAC|HIV 389 255 126M * 0 126 TTACCATACCTAGTATAAACAATGAGACACCAAGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTA @@@<A@@?8??:;:BD:DC:5:9@@ABCC=J=C<B:3::AACDCCBC@AA>DDCEEE=E?ECBB:GKCC=:2:;3>>DCB=CBBA>ABB;B761::9@ACBCCBCB3BBBBCD?BB@BB>E8NNB4 AS:i:6322 NS:f:63.22
2: VBT43:00111:00712 18 NOTANAC|HIV 862 255 128M * 0 128 GCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCTCAAAAGACTTAATAGCAGAAATACA =?A>?9@@C@;?@@BCBB<BCBB<AA<BBBC>CCCCC=AAA??9??A:A@@:+9999;4B8+881::<3BCDB=B<CCCCBBBB<B@A???@<ACBBC4DD>>>3BBBAAA;D@DCCC?@?9CCCCC< AS:i:5947 NS:f:59.47
2: VBT43:00133:00701 2 NOTANAC|HIV 638 255 66M * 0 66 GATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC @:95:BBCAB:83:??ADDMMD0CBCBCAAA:A@;@9??8>>;A;BFBB;ABBB<B:BB::4:@?9 AS:i:2756 NS:f:27.56
2: VBT43:00134:00702 18 NOTANAC|HIV 928 255 89M * 0 89 CTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATA 9>1>>@:192@@BBEECC=BBBCCCC>DBBCE8DDBCB8CCBBBA;A;C???:;:ADC@@@A@;AACA;A;89=B>D>D=BB>::9>?9 AS:i:3974 NS:f:39.74
2: VBT43:00139:00729 18 NOTANAC|HIV 597 255 54M * 0 54 AACAAAAATAGAGGAACTAAGAGAACATCTATTGAAGTGAAGATTCTACACACC 8??0A?A@:99@:@;DAA<BBBB<CCECCBB=CE?FBCEAG::6AAA@AACB<A AS:i:2083 NS:f:20.83
2: VBT43:00100:00765 18 NOTANAC|HIV 534 255 63M * 0 63 AGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAG ?:1::-;;:BB>EDBCD9999???9AAA@??DCC>CCBBBBAB<AAA9@BB;3:::@A@??DB AS:i:3165 NS:f:31.65
2: VBT43:00108:00785 18 NOTANAC|HIV 634 255 23M1D155M * 0 179 TGGGGATTCTACACACCAGACAAAAACATCAGAAAGAACCTCCATTCCACTGAATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTA 5':::<6==@AB@@@:CA@?9+99999A?;;;0<;;492;;3??8?9AAC@=4B9*990<<<;5AA>7>>>6<?><@8???:???@@>@B??:?BBA?ABBCCC=BCB4CCCCCEDDBBA:B@D@?993>>??BBABCCB<CB<BBBB9A929992@6@>9?7CCB;AAABCDC=FF= AS:i:7955 NS:f:79.55
2: VBT43:00125:00766 2 NOTANAC|HIV 1 255 113M * 0 113 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTG ??7@@<CBBA=BBD=BB@@?CCCCD=???AAA5A<??9@@:?>9@9@@<BBC;?>+999+9>9AA;BB;??9@;A@<BAABEC=BBAAAA7ACCC9CDCB>BBABCCD<CC<B AS:i:5541 NS:f:55.41
2: VBT43:00131:00771 2 NOTANAC|HIV 141 255 65M6I76M * 0 141 TTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAAT B<CCDCD4C<CD=D<B9955,:?6BCCCB?CCB@A<ABAAAA9A>>ABAB;BBCA@/<5::5:>?BAAC@=69>>89@4:8988.@9B>@CC9992:B@?@B=BA<A<BB<ABAC;BB56/7>@?;@A=>5B=CE<CC:>5=@0919 AS:i:6090 NS:f:60.90
2: VBT43:00133:00799 18 NOTANAC|HIV 727 255 92M * 0 92 CCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGG 3????>??@>>>:///*;;:///BABBB=CACAB@@<DCCEEFKFBBA;A?9??CC9C?1>>>7>5>>7>6A??8AABBBAB<DGDC=AB:A AS:i:4589 NS:f:45.89
2: VBT43:00137:00784 18 NOTANAC|HIV 449 255 115M * 0 115 CACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTA =@BA6EA@@:;/;;3766@B;@@@A:;;;;A:@5@<8>8???>??C,A@?88505;;?=:A3CCC-CCCA@@=5=>>;BABB@@@@=8>A;CBBBD?BCCDCB=AADD<4????7 AS:i:5543 NS:f:55.43
2: VBT43:00143:00796 2 NOTANAC|HIV 1635 255 46M * 0 46 TGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAGAGTACTA 8:91:6/66>>??BC<C=CBBBBCBCCCE=D>CEB@;@>=??@><: AS:i:2192 NS:f:21.92
2: VBT43:00147:00794 2 NOTANAC|HIV 863 255 184M * 0 184 CACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAGTACAGAAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCT >@?CE<BCCD<BBCCCBD?DBAA<AC<BBBB<A?>?A<C@@@A<@B@>A???@@.@@AC9A@?;494999*9A<B=CCCBCAAA>BBDBBA@<@@@@BJJ8B?ABB4CBBB<B=CB>?>BB<BBBACCA;A@??9>C??9@9?<C9AB<CC>;;==@?3?B5;;>H:@AAD9677(7.773;<< AS:i:8364 NS:f:83.64
2: VBT43:00149:00791 2 NOTANAC|HIV 851 255 135M * 0 135 GGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGACTTAATAGCAGAAG >@?,<7@9CE?BBGBDC>BABD=BBBACBD=BBCC<@A<B??@<BA?@@:@A:::58889?8=<DD.?@@E5>=<<6579??2>A:A<B@@@CCBC=CCCCFA@;???@BBB7CBBAA3A@@@;A<AB@A@@@<A AS:i:6103 NS:f:61.03
2: VBT43:00105:00812 2 NOTANAC|HIV 912 255 145M * 0 145 AGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCGTATTATGACCCCACAAAAGGCTTAATAGCAGAAGTACAGGAGCAGGAGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAGAATCTGAAAACAGGA >>>>A3@CAB:BB=>8???=?7AA;A@BBC@BBA>8?BBBA>>:>>>>>>>3:@@@@/@:@@::5:<?>BCB;BBACAA<@BAAB=CCBB<B<C;B<A@:@A<@@@@@E9BB<::6B:@@8728==/87>>9?D<<=??.;;;4; AS:i:6448 NS:f:64.48
2: VBT43:00111:00810 18 NOTANAC|HIV 452 255 152M * 0 152 AGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAA 8)88::1:+>>7>@???>CCAB>AAB@N@C<EDDDHDCC@<@:*:::::>:@AAAC;<1==8&988559=7@@?9?>@BB???92999@@ADB=CBB@@B=BBBBA9BBBBBCBCB<DB@>>???>CBB<BABB9C@BBB@B?AA>CC/BCB AS:i:7447 NS:f:74.47
2: VBT43:00123:00804 18 NOTANAC|HIV 41 255 124M * 0 124 CAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCC BC<B<BB;AAB<B:CC3DD873?8>>?:?@:@<BB9B<@?99:??>>.>>>>.>?@BB@=BBBCCB;BB9BBBAB@BA9@@>;:+:::1=8?:E4EDDD=E@@4BBBB=D<CB;@@;+66669A AS:i:6279 NS:f:62.79
2: VBT43:00129:00845 2 NOTANAC|HIV 286 255 197M * 0 197 CATCCCGCAAGGCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAGGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCA ACACD>DDB?F>CBAAAA>+?DBBBC0CCBBBB=BCCBAA>>BBBAB?B<@@@@A<9>;;;;;-;?:@:@<?@:@@?@@@5@@@<5::<6:98>@@@<AAA65929?9@??@:=8>>?><<3::3:>>>A:::6:9>5<<8<@BA9>>=?:9882558<995;;CA??D3ABA8<<5?6:99::5<>>@:A>>8>8? AS:i:9260 NS:f:92.60
2: VBT43:00133:00826 18 NOTANAC|HIV 1060 255 37M * 0 37 TATGCAAAAATGAGGAGTGCCCACACTAATGATGTAA :@@@:*55999>>:>B>A@:BBBDCCC>DDFBCCC9A AS:i:1773 NS:f:17.73
2: VBT43:00146:00802 18 NOTANAC|HIV 157 255 49M6I37M * 0 86 GAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAA B7CEC<KFDDBB<CCCCB=FFDC?:???CBBB<CA>2???>8@9A@A??>>>??9AA;@BB=BB@3AA@<AABBECA9AA???BB;CCAB:C AS:i:3283 NS:f:32.83
2: VBT43:00105:00860 2 NOTANAC|HIV 382 255 174M * 0 174 ACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGAT ;?77:99629A8????=CABA?A@D<??<?CAAABBC?CCC>@?9??@@:;:CAAADB=?=??993:<B?>>>5=;@9@@8?<>;;@>:@A??9??@9@9@@3?>>;;;@==>A@@@,@??9?=@::0554+9>>??*??>@2>?9>AF;;;89<3:==2;;;>4;;>>=@9=6 AS:i:8544 NS:f:85.44
2: VBT43:00106:00896 18 NOTANAC|HIV 413 255 13M1D157M * 0 171 AGACACCAGAGATAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAA ///:=5?>@@@9::A:::???AB//+@@///B:@:DDGB:DDA@9:-::2::>AC=CBDF>;:::@:@9AAABBBBBBAAA3CCBBBC>@?@BC=B9CCC0CCBCCBB<GGD>FCCBBAAAC<BC<JAAAA<AABAFE>CBCDC<BBACCBBBB>BA@CBBC@9;;5(55 AS:i:7828 NS:f:78.28
2: VBT43:00108:00862 2 NOTANAC|HIV 497 255 114M * 0 114 AAATCTTAGAGCCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGG BG:BBB=CFA@C7:::,=;;@@0<BBB;ABAEDCBBBBBA;ABB8ACCE7>>AAAA:@?<444/4<@ABBBB:B@@ABCBA<AAAA8AB@A5@???@@A=<488=AA,@?>>>/ AS:i:5466 NS:f:54.66
2: VBT43:00108:00883 18 NOTANAC|HIV 1056 255 63M1D15M1D9M * 0 89 AAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAGATAACCACAGAAGCATAGTAA +9531877@,BBB;:9@;A887?8?@@BABC<:;9??>8*5555494<7BBBC?ECBABBA9-;;:::1=8A>>>6/669::>>=0; AS:i:3196 NS:f:31.96
2: VBT43:00122:00854 2 NOTANAC|HIV 1 255 127M * 0 127 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAA B?:BB=B@@A>BCB=CCCB=??@??8????CC7B>BC;;;CED<A8990:?>9@A,:::+:A9BB<CC>@@;?;A@<CCCFCC?BBAAAA7ABCC8CC??9?DC@@AA2::3:BBBBECC9A@2::+ AS:i:6225 NS:f:62.25
2: VBT43:00123:00860 18 NOTANAC|HIV 740 255 107M * 0 107 CAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGAGGAAATTAAATTAGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAACAATTATGTAGACTC :::*:::::?CBBBC=EBBBCAA<BCCCCCDEDBB>BC>CCCCCB=A9>>7<4>>;@@<CC=CCCBBG?9???9>@?7???<?9AAAB7BBBB;9599BBBC@@@@E AS:i:4842 NS:f:48.42
2: VBT43:00128:00870 2 NOTANAC|HIV 832 255 92M * 0 92 CAATTATGTAGACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGA <@9>456::>@>>?B9?:?BEE6B;B<@>4>>>>>>:@@AB;AA@@>=<4;741-1;6>::;8>=CBB:>;>>>;CCC<BC>>>?4?CAA6? AS:i:4190 NS:f:41.90
2: VBT43:00137:00886 18 NOTANAC|HIV 714 255 76M * 0 76 ATGGACAGTACAGCCTATAAAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAA 8/)///9>A:;:C=BA@@9HBCAB;5::;4FFGCCCDCBBB<9;;BC@?9BBCBGC::9BBABC>ACC=3==;3AA AS:i:3667 NS:f:36.67
2: VBT43:00142:00855 18 NOTANAC|HIV 101 255 117M * 0 117 TAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGATCGACAA ..DD@>4A9)999>@>>9)99999)9991?9?:>0????7D@A3FGH?:?3B:5==5(:::,ABAAC?:@?ECC>DB@AB:CBBBEB:2;::-AABB;B;F@@@AA::9ABBBBA<A AS:i:5040 NS:f:50.40
2: VBT43:00145:00853 2 NOTANAC|HIV 496 255 218M * 0 218 AAAATTTTAGAACCTTTTAAAAAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATGGGTTATGAACTCCATCCTGATAA ACB4BGC4B>>7<6;;;(9999:(:DDG?HD?DCEEBBDDD=BBB<BBAD<AACBBB<AAAAAA9???BBBAC>BCABCCCA;AABA8B@BC;BB??CCB@?8@????1@@@@A<C<>>>EEC@?:B>@;;45/5?:ABBCC2>;4;::A?@@@<D@?@?@?>>*<=;;;>@@4>?9?4:;:;:3;9;::=4:98:0:7>??A9@@F=?>>8<9:582 AS:i:9965 NS:f:99.65
2: VBT43:00101:00937 2 NOTANAC|HIV 309 255 190M * 0 190 AAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAATTCCATTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAA ???4??CCAB<ADBBABAA<ABAB@I9BAA@>B>888BBB4CD@E>D>CC=CBBDDD@FBBB<BBB=B=BA@AABBAAAA@6;=8=?>?=A7999:9?9::2:ABBDCCC?CDF>CB=CFFDBBBCAAACB=BAAA??9>;CBCCA9BBB<BA9A;AAA:?4:@AB9?>>7=5<<2<A@AA@@?=76655 AS:i:9358 NS:f:93.58
2: VBT43:00102:00945 18 NOTANAC|HIV 77 255 32M * 0 32 TGACAGAAGAGAAAATAAAAGCATTAGTAGAA 99>>AA?CCBC9BBAA4BBBBGB<A@BABB:C AS:i:1524 NS:f:15.24
2: VBT43:00103:00903 18 NOTANAC|HIV 94 255 105M * 0 105 AAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAG 5???;:6AAACCA6C9*899<:<A@5@@@:>.;;:33073A3AAB?7==9*::::1A7BA<AAC5DBA:BBABB?:>>BCC?CCDID;BBB;9:A4<A:*55555 AS:i:5030 NS:f:50.30
2: VBT43:00104:00911 2 NOTANAC|HIV 741 255 185M * 0 185 AGAAAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAGGTAAAACAATTATGTAGACTCATTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAACTAGAACTGGCAGAAAACAGGGAGA @@BBBB/BBCBBBBAAA?BBB9959AAABBBBBAA<AC=CFCAA2999+:199+;;AB9CD?@@@??:::2:>A<@@A9AB=B=CACBCC7CB?C?E999AA???@@B>@>>>/=5>8??8@A?A>>7997A6==?><??9?BBB<BB<AAAA7>>>?A8@@@?@9?@?8<<7555'65560995 AS:i:8466 NS:f:84.66
2: VBT43:00110:00920 2 NOTANAC|HIV 537 255 167M * 0 167 TATTTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAACTGAGAGAACATCTATTGAAGTGGGGATTCTACACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCACTGGATAGGTTATGAACTCC 2:9@:@BBB<BBDEDF??A???C9AABBBBCC>B=??BAAA<ABBD7?:::,:A@BCJEIG>CBCC8CBBABB=B<BBBAA@BB<@?>888?8?A=CCCFJ6@B=BA@AA??>:>>>BEEEAD-CC@::7AE6@@9@9?@589195999@:AA@@9?67777/4?D8 AS:i:7614 NS:f:76.14
2: VBT43:00113:00924 18 NOTANAC|HIV 517 255 45M * 0 45 AAACGAAATCCAGACATAGTTATTTATCAATACATGGATGATTTG 9999=6>?C<A@BAAABCC>BC<KCBC?:@??BBB=BA@@:1:97 AS:i:2038 NS:f:20.38
2: VBT43:00114:00936 2 NOTANAC|HIV 1 255 71M * 0 71 CCCATTAGTCCTATTGACACTGTACCAGTAAAATTGAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATG 9B9BC<BEBB;B?>7>BACEEMGDC=@>99992:?DD:B?>DD>C>CD>CCC=AC,:::+:?9>@:@A<A? AS:i:3492 NS:f:34.92
2: VBT43:00126:00917 2 NOTANAC|HIV 715 255 88M * 0 88 TGGACAGTACAGCCTATACAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGGAAATTAAATTGGGCAA =B=ACCCBCDFBB=BCBBBAAAAAB<ABDGDB/BGBBA@@=<B><@@::2:?@B::;??CC<AA;B?>>>?+::,::>>9@;?D<BC? AS:i:4310 NS:f:43.10
2: VBT43:00129:00942 2 NOTANAC|HIV 156 255 52M6I104M * 0 156 TGAAAACCCATACAATACTCCAGTATTTGTCATAAAGAAAAAGGAAAGTAGTAGTGGCAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAA :A@>>+95*6::695:ECBB>BC@AAB:>BA???B<BBCCC4B>CC<CCBBAAACE>A@@8AB>CBBBB8C=@C===66629BABCB;AA<D<@@:@EAA:??>?99<B@<BCBBBC=CC>FE=C=BB<B<BBB;>AABCD<C??>E:CAAA?==-99559* AS:i:6607 NS:f:66.07
2: VBT43:00134:00937 2 NOTANAC|HIV 481 255 29M1D19M * 0 49 CAAAGTAGCATGACAAAAATCTTAGAGCCTTTAAAAAACGAAATCCAG <@<9:75??????A>>?B/8:@;ABA??2::,9>>>>+BAA@,::795 AS:i:1774 NS:f:17.74
2: VBT43:00141:00902 2 NOTANAC|HIV 189 255 17M6I132M * 0 149 AAAGAAAAAGGAAAGTAGTAGTGGTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGTGAAGTTCAATTAGGAATACCACATCCCGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTG BB:>><>>/A;AF<CCDEB@BAB=ABB:BB;?????4;9AAABB>>>:>BCCBD=BB=A;BB=DBBB<AAAB=BCCC>CBBBBC>BB=CB>C<BB<A<@CC<BAABCH;B>>:>2?ABBBCC0BDGCCC0BBBBBC=AA@@BCCC=AAA999/9? AS:i:6435 NS:f:64.35
2:
2: #----------------------------------------------------------------------#
2: # Index can optionaly be used to speed-up database upload for pfsearch.
2: # This should be especially usefull for repetitive database searches
2: # using the heuristic.
2: #----------------------------------------------------------------------#
2:
2: $PFINDEX -f -o $TMPDIR/CVPBR322.fa.idx $TMPDIR/CVPBR322.fa
2: $PFSEARCHV3 -n -f -o 7 ./ecp.prf $TMPDIR/CVPBR322.fa | sort > $TMPDIR/A.out # FASTA to TSV
2: $PFSEARCHV3 -n -f -i $TMPDIR/CVPBR322.fa.idx -o 7 ./ecp.prf $TMPDIR/CVPBR322.fa | sort > $TMPDIR/B.out # FASTA to TSV
2: diff $TMPDIR/A.out $TMPDIR/B.out
2:
2: $PFINDEX -q -o $TMPDIR/hiv.fastq.idx ./hiv.fastq
2: $PFSEARCHV3 -n -q -b -o 8 ./hiv.prf ./hiv.fastq | sort > $TMPDIR/A.out
2: $PFSEARCHV3 -n -q -b -o 8 -i $TMPDIR/hiv.fastq.idx ./hiv.prf ./hiv.fastq | sort > $TMPDIR/B.out
2: diff $TMPDIR/A.out $TMPDIR/B.out
2:
2: #----------------------------------------------------------------------#
2: # Profile and/or sequence can be reversed on the fly. If both are
2: # reversed the match score is the same
2: #----------------------------------------------------------------------#
2: $PFSEARCHV3 -f -a rand_dna.prf rand_dna.seq
2: 2.496 520 pos. 14 - 36 dna_250_1
2: $PFSEARCHV3 -f -a -r -R rand_dna.prf rand_dna.seq
2: 2.496 520 pos. 36 - 14 dna_250_1(-)
2:
2: #----------------------------------------------------------------------#
2: # There is a much better support of rev/comp search in DNA sequences,
2: # featuring the full IUPAC code.
2: # To illustrate these capabilities, let build a profile for bacterial
2: # 16S sequence, starting from the Rfam seed RF00177.msa. First create
2: # an adhoc substitution matrix
2: #----------------------------------------------------------------------#
2: $MAKE_IUPAC_CMP -M 20 -m -30 > $TMPDIR/iupac20-30.cmp
2:
2: #----------------------------------------------------------------------#
2: # ... let build a profile for bacterial 16S sequence, starting from
2: # the Rfam seed RF00177.msa.
2: #----------------------------------------------------------------------#
2: cat ./RF00177.msa \
2: | perl -pe 'tr/U/T/ if ! /^>/' \
2: | $PFW -m -N 25 - \
2: | $PFMAKE -m -3 -S 0.01 -F 100 - $TMPDIR/iupac20-30.cmp \
2: | perl -pe 's/^ID SEQUENCE_PROFILE/ID 16S/' \
2: > $TMPDIR/16S.prf.tmp
2:
2: head -100 SRR9619541.sample.fastq > $TMPDIR/small.sample.fastq
2:
2: $PFSEARCHV3 -t 1 -n -q $TMPDIR/16S.prf.tmp $TMPDIR/small.sample.fastq
2: 23.510 2351 pos. 1 - 247 SRR9619541.1 1 length=502
2: 24.040 2404 pos. 1 - 247 SRR9619541.2 2 length=502
2: 20.290 2029 pos. 1 - 245 SRR9619541.3 3 length=502
2: 22.360 2236 pos. 1 - 244 SRR9619541.4 4 length=502
2: 23.090 2309 pos. 1 - 228 SRR9619541.5 5 length=502
2: 24.090 2409 pos. 1 - 247 SRR9619541.6 6 length=502
2: 20.660 2066 pos. 1 - 249 SRR9619541.7 7 length=502
2: 22.210 2221 pos. 1 - 223 SRR9619541.8 8 length=502
2: 23.200 2320 pos. 1 - 248 SRR9619541.9 9 length=502
2: 23.510 2351 pos. 1 - 243 SRR9619541.10 10 length=502
2: 22.010 2201 pos. 1 - 248 SRR9619541.11 11 length=502
2: 23.890 2389 pos. 1 - 245 SRR9619541.12 12 length=502
2: 23.970 2397 pos. 1 - 228 SRR9619541.13 13 length=502
2: 23.380 2338 pos. 1 - 237 SRR9619541.14 14 length=502
2: 22.590 2259 pos. 1 - 247 SRR9619541.15 15 length=502
2: 23.500 2350 pos. 1 - 248 SRR9619541.16 16 length=502
2: 23.470 2347 pos. 1 - 223 SRR9619541.17 17 length=502
2: 21.700 2170 pos. 1 - 249 SRR9619541.18 18 length=502
2: 23.890 2389 pos. 1 - 224 SRR9619541.19 19 length=502
2: 23.100 2310 pos. 1 - 248 SRR9619541.20 20 length=502
2: 21.040 2104 pos. 1 - 248 SRR9619541.21 21 length=502
2: 19.290 1929 pos. 1 - 195 SRR9619541.22 22 length=502
2: 24.560 2456 pos. 1 - 244 SRR9619541.23 23 length=502
2: 22.780 2278 pos. 1 - 228 SRR9619541.24 24 length=502
2: 23.760 2376 pos. 1 - 244 SRR9619541.25 25 length=502
2:
2: #----------------------------------------------------------------------#
2: # Prepare a randomized databse to calibrate the profiles
2: #----------------------------------------------------------------------#
2: cat ./SRR9619541.sample.fastq \
2: | perl -ne '$x++;if( $x % 4 == 2 ){chomp;s/(.{1,60})/$1\n/g;print ">seq$x\n$_"}' \
2: | $SCRAMBLE -m permutation -M 10 - \
2: > $TMPDIR/permut.fa
2:
2: # $PFCALIBRATEV3 -F $TMPDIR/permut.fa $TMPDIR/16S.prf.tmp > $TMPDIR/16S.prf
2: # $PFSEARCHV3 -t 1 -n -q $TMPDIR/16S.prf $TMPDIR/small.sample.fastq
2:
2: #----------------------------------------------------------------------#
2: # Verify handling of characters not in the profile alphabet
2: #----------------------------------------------------------------------#
2:
2: cat > $TMPDIR/ACGTAACGT.seq << EOI
2: >ACGTAACGT weight=10
2: ACGTAACGT
2: EOI
2: cat > $TMPDIR/ACGTWACGT.seq << EOI
2: >ACGTWACGT weight=1.0
2: ACGTWACGT
2: EOI
2: $PFMAKE -m -3 -S 0.01 -F 100 $TMPDIR/ACGTAACGT.seq $CMPDIR/dna_50_40.cmp > $TMPDIR/ACGTAACGT.prf
2:
2: $PFSEARCHV3 -fa -o 6 $TMPDIR/ACGTAACGT.prf $TMPDIR/ACGTAACGT.seq # raw_score=450 PSA=ACGTAACGT
2: >ACGTAACGT/1-9 motif=ZZ99999|SEQUENCE_PROFILE norm_score=4.500 raw_score=450 level=-2 level_tag=# motif_start=1 motif_end=-1 seq_end=-1 motif_rev=F strand=+
2: ACGTAACGT
2: $PFSEARCHV3 -fa -o 6 $TMPDIR/ACGTAACGT.prf $TMPDIR/ACGTWACGT.seq # raw_score=383 PSA=ACGTWACGT (not ACGTXACGT)
2: >ACGTWACGT/1-9 motif=ZZ99999|SEQUENCE_PROFILE norm_score=3.830 raw_score=383 level=-2 level_tag=# motif_start=1 motif_end=-1 seq_end=-1 motif_rev=F strand=+
2: ACGTWACGT
2:
2:
2: #----------------------------------------------------------------------#
2: # extra & bug fix related tests
2:
2: # pfscanV3 should accept motif files containing patterns, and be able to ignore patterns with --matrix-only option
2: $PFSCANV3 -o4 --matrix-only ./PS00741_PS50010.dat ./VAV_HUMAN.seq
2: >DH_2 L=0 32.293 1787 pos. 194 - 373 [ 1, -1] PS50010|Dbl homology (DH) domain profile.
2: KRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQRF----LKPQDIEIIFINIEDLLRVH-T
2: HFLKEMKEALGT-PGAANLYQVFIKYKE-RFLVYGRYCSQVESASKHLDRVAAAREDVQM
2: KLEECSQRANnGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQEA-MEKENLRLALDAMRD
2: LAQCVNEV
2:
2/6 Test #2: execute_test_V3.sh .......................... Passed 49.74 sec
test 3
Start 3: check_output_of_test_V3.sh
3: Test command: /usr/bin/sh "-e" "test_V3_output.sh"
3: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
3: Test timeout computed to be: 1500
3/6 Test #3: check_output_of_test_V3.sh .................. Passed 56.87 sec
test 4
Start 4: execute_test_scan_search.pl
4: Test command: /usr/bin/perl "test_scan_search.pl" "all.prf" "all.seq" "/tmp/test_scan_search"
4: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
4: Test timeout computed to be: 1500
4: [34m# system : [0m[35mmkdir -p /tmp/test_scan_search[0m
4: [34m# system : [0m[35mmkdir -p /tmp/test_scan_search/prf[0m
4: [34m# system : [0m[35mmkdir -p /tmp/test_scan_search/seq[0m
4: [34m# system : [0m[35mmkdir -p /tmp/test_scan_search/hit[0m
4: [34m# open : [0m[30mall.prf[0m
4: [34m# open : [0m[30m> /tmp/test_scan_search/prf/SH2.prf[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfindex -f -o /tmp/test_scan_search/seq/all.idx all.seq[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -f /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearch.out | sort -nr > /tmp/test_scan_search/hit/score.ref.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -f -L -1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearch.out | sort -nr > /tmp/test_scan_search/hit/score.ref.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -L -1 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -L -1 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -f -C 6.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearch.out | sort -nr > /tmp/test_scan_search/hit/score.ref.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 6.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 6.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -f -C 8.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearch.out | sort -nr > /tmp/test_scan_search/hit/score.ref.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 8.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 8.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -f -C 10.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearch.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearch.out | sort -nr > /tmp/test_scan_search/hit/score.ref.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 1 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 1 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 1 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 1 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 1 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 2 -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 2 -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 2 all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 2 /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 [0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx -n[0m
4:
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfscanV3 -f -N 10.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx all.prf all.seq | perl -pe '/ (\d+) /;$_="$1\n"' | sort -nr > /tmp/test_scan_search/hit/score.scan.out[0m
4: Enforcing SSE 2 as requested.
4: pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case.
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# system : [0m[35mrm -f /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -N 10.0 --sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx /tmp/test_scan_search/prf/SH2.prf all.seq >> /tmp/test_scan_search/hit/pfsearchV3.out[0m
4: [34m# system : [0m[35mperl -pe '/ (\d+) /;$_="$1\n"' < /tmp/test_scan_search/hit/pfsearchV3.out | sort -nr > /tmp/test_scan_search/hit/score.search.out[0m
4: [34m# system : [0m[35mdiff /tmp/test_scan_search/hit/score.ref.out /tmp/test_scan_search/hit/score.scan.out > /tmp/test_scan_search/hit/diff.out[0m
4: [34m# test Ok : [0m[30m--sse2 -t 2 -i /tmp/test_scan_search/seq/all.idx [0m
4:
4: [34m# system : [0m[35mrm -Rf /tmp/test_scan_search[0m
4/6 Test #4: execute_test_scan_search.pl ................. Passed 17.77 sec
test 5
Start 5: execute_test_pfsearchV3_iupac.pl
5: Test command: /usr/bin/perl "test_pfsearchV3_iupac.pl" "/tmp/test_pfsearchV3_iupac"
5: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
5: Test timeout computed to be: 1500
5: [34m# system : [0m[35mmkdir -p /tmp/test_pfsearchV3_iupac[0m
5: [34m# ### : [0m[30mPrepare a dataset of random sequences (IUPAC)[0m
5: [34m# db size : [0m[30m2000[0m
5: [34m# seq length : [0m[30m500[0m
5: [34m# prf length : [0m[30m250[0m
5: [34m# seed : [0m[30m1234[0m
5: [34m# system : [0m[35mmkdir -p /tmp/test_pfsearchV3_iupac/test.iupac/prf[0m
5: [34m# system : [0m[35mmkdir -p /tmp/test_pfsearchV3_iupac/test.iupac/seq[0m
5: [34m# system : [0m[35mmkdir -p /tmp/test_pfsearchV3_iupac/test.iupac/hit[0m
5: [34m# open : [0m[30m> /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa[0m
5: [34m# open : [0m[30m> /tmp/test_pfsearchV3_iupac/test.iupac/prf/sample.fa[0m
5:
5: [34m# ### : [0m[30mCompare default versus reverse/reverse: scores must be always identical, coordinates often identical[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake -m -3 -S 0.01 -F 100 /tmp/test_pfsearchV3_iupac/test.iupac/prf/sample.fa /build/reproducible-path/pftools-3.2.12/data/Matrices/iupac_50_40.cmp > /tmp/test_pfsearchV3_iupac/test.iupac/prf/sample.prf[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -a -o 6 /tmp/test_pfsearchV3_iupac/test.iupac/prf/sample.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/out_1.psa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -a -o 6 -R -r /tmp/test_pfsearchV3_iupac/test.iupac/prf/sample.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/out_2.psa[0m
5: [34m# compare : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/out_1.psa versus /tmp/test_pfsearchV3_iupac/test.iupac/hit/out_2.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/out_1.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/out_2.psa[0m
5: [34m# Ok perfect : [0m[30m1788[0m
5: [34m# Ok good : [0m[30m131[0m
5: [34m# Ok disjoint : [0m[30m71[0m
5: [34m# Ok other 1 : [0m[30m0[0m
5: [34m# Ok other 2 : [0m[30m10[0m
5: [34m# Error : [0m[30m0[0m
5: [34m# test : [0m[30mPASS[0m
5:
5: [34m# ### : [0m[30mCompare scores and match coordinates V3 versus V2[0m
5: [34m# open : [0m[30m> /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.fa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl -R -C /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.fa > /tmp/test_pfsearchV3_iupac/test.iupac/prf/revcomp.fa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl -R -C /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa > /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.revcomp.fa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake -m -3 -S 0.01 -F 100 /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.fa /build/reproducible-path/pftools-3.2.12/data/Matrices/iupac_50_40.cmp > /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.prf[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfmake -m -3 -S 0.01 -F 100 /tmp/test_pfsearchV3_iupac/test.iupac/prf/revcomp.fa /build/reproducible-path/pftools-3.2.12/data/Matrices/iupac_50_40.cmp > /tmp/test_pfsearchV3_iupac/test.iupac/prf/revcomp.prf[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -a -o 6 /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.psa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -faxzk /tmp/test_pfsearchV3_iupac/test.iupac/prf/forward.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.2.psa[0m
5: [34m# ### : [0m[30mCompare V3 versus V2[0m
5: [34m# compare : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.psa versus /tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.2.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.2.psa[0m
5: [34m# Ok perfect : [0m[30m1850[0m
5: [34m# Ok good : [0m[30m150[0m
5: [34m# Ok disjoint : [0m[30m0[0m
5: [34m# Ok other 1 : [0m[30m0[0m
5: [34m# Ok other 2 : [0m[30m0[0m
5: [34m# Error : [0m[30m0[0m
5: [34m# test : [0m[30mPASS[0m
5:
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3 -f -a -o 6 /tmp/test_pfsearchV3_iupac/test.iupac/prf/revcomp.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.revcomp.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.psa[0m
5: [34m# system : [0m[35m/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/Fortran/pfsearch -faxzk /tmp/test_pfsearchV3_iupac/test.iupac/prf/revcomp.prf /tmp/test_pfsearchV3_iupac/test.iupac/seq/db.revcomp.fa | /build/reproducible-path/pftools-3.2.12/src/Perl/sort_fasta.pl - > /tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.2.psa[0m
5: [34m# ### : [0m[30mCompare V3 versus V2[0m
5: [34m# compare : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.psa versus /tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.2.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.2.psa[0m
5: [34m# Ok perfect : [0m[30m1861[0m
5: [34m# Ok good : [0m[30m139[0m
5: [34m# Ok disjoint : [0m[30m0[0m
5: [34m# Ok other 1 : [0m[30m0[0m
5: [34m# Ok other 2 : [0m[30m0[0m
5: [34m# Error : [0m[30m0[0m
5: [34m# test : [0m[30mPASS[0m
5:
5: [34m# ### : [0m[30mCompare default versus revcomp/revcomp (V2): scores must be identical[0m
5: [34m# compare : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.2.psa versus /tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.2.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.2.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.2.psa[0m
5: [34m# Ok perfect : [0m[30m0[0m
5: [34m# Ok good : [0m[30m1[0m
5: [34m# Ok disjoint : [0m[30m1864[0m
5: [34m# Ok other 1 : [0m[30m1[0m
5: [34m# Ok other 2 : [0m[30m134[0m
5: [34m# Error : [0m[30m0[0m
5: [34m# test : [0m[30mPASS[0m
5:
5: [34m# ### : [0m[30mCompare default versus revcomp/revcomp (V3): scores must be identical[0m
5: [34m# compare : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.psa versus /tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/forward.psa[0m
5: [34m# open : [0m[30m/tmp/test_pfsearchV3_iupac/test.iupac/hit/revcomp.psa[0m
5: [34m# Ok perfect : [0m[30m0[0m
5: [34m# Ok good : [0m[30m1[0m
5: [34m# Ok disjoint : [0m[30m1864[0m
5: [34m# Ok other 1 : [0m[30m1[0m
5: [34m# Ok other 2 : [0m[30m134[0m
5: [34m# Error : [0m[30m0[0m
5: [34m# test : [0m[30mPASS[0m
5:
5/6 Test #5: execute_test_pfsearchV3_iupac.pl ............ Passed 40.52 sec
test 6
Start 6: execute_test_pfsearchV3_pattern-regexp.sh
6: Test command: /usr/bin/sh "-ve" "test_pfsearchV3_pattern-regexp.sh"
6: Working Directory: /build/reproducible-path/pftools-3.2.12/testing/examples/
6: Test timeout computed to be: 1500
6: #!/bin/sh -ve
6:
6: #----------------------------------------------------------------------#
6: # PATHS declaration (set by cmake/make: do not modify them here)
6: #----------------------------------------------------------------------#
6: PFSEARCHV3=/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu/src/C/pfsearchV3
6:
6: TMPDIR=/tmp/test_pfsearchV3_pattern
6: mkdir -p $TMPDIR
6:
6: #----------------------------------------------------------------------#
6: # The PFTOOLS is a powerful software to align biological sequences.
6: # Owing to the 'generalized profile syntax', it allows the fine-tuning
6: # of an alignent scoring system, beyond what is feasible by most other
6: # software. Despite the PFTOOLS are crippled by a lot of legacy code,
6: # they are still extremely useful for precision work.
6: #
6: # Nota bene to use this script as a testsuite:
6: # (1) The output order of pfsearch is reproducible, as well as the one of
6: # pfsearchV3 with -t 1.
6: # (2) Refrain using any pipe.
6: #----------------------------------------------------------------------#
6:
6: #----------------------------------------------------------------------#
6: # TESTS FOR PATTERN AND REGEXP SEARCHES
6: # Run different patterns, and the corresponding regexps, and compare to the expected outputs
6: #----------------------------------------------------------------------#
6:
6: # The PROSITE Pattern syntax is described in details in the User Manual (https://prosite.expasy.org/prosuser.html).
6: # Here is a summary:
6: # - The standard IUPAC one-letter codes for the amino acids are used.
6: # - The symbol 'x' is used for a position where any amino acid is accepted.
6: # - Ambiguities are indicated by listing the acceptable amino acids for a given position, between square parentheses '[ ]'. For example:[ALT] stands for Ala or Leu or Thr.
6: # - Ambiguities are also indicated by listing between a pair of curly brackets '{ }' the amino acids that are not accepted at a given position. For example: {AM} stands for any amino acid except Ala and Met.
6: # - Each element in a pattern is separated from its neighbor by a '-'.
6: # - Repetition of an element of the pattern can be indicated by following that element with a numerical value or a numerical range between parenthesis. Examples: x(3) corresponds to x-x-x, and x(2,4) corresponds to x-x or x-x-x or x-x-x-x.
6: # - When a pattern is restricted to either the N- or C-terminal of a sequence, that pattern either starts with a '<' symbol or respectively ends with a '>' symbol.
6: #
6: # e.g.:
6: # C-x-C-x(2)-[GP]-[FYW]-x(4,8)-C (spaces, tabs, and line breaks are ignored)
6: # can be translated as
6: # Cys-any-Cys-any-any-[Gly or Pro]-[Phe or Tyr or Trp]-'four to eight any'-Cys
6:
6:
6: #----------------------------------------------------------------------#
6: # Search with fully defined pattern/regexp
6: #----------------------------------------------------------------------#
6: $PFSEARCHV3 'pattern{L-N-N-L-L-P-H-A-I-N-L-R-E-V-N-L-R-P-Q-M-S-Q}' ./VAV_HUMAN.seq >$TMPDIR/fully_defined-pattern.hit
6: $PFSEARCHV3 'regex{LNNLLPHAINLREVNLRPQMSQ}' ./VAV_HUMAN.seq >$TMPDIR/fully_defined-regexp.hit
6: diff -b $TMPDIR/fully_defined-pattern.hit patterns/fully_defined.hit # expecting no difference
6: diff -b $TMPDIR/fully_defined-regexp.hit patterns/fully_defined.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search with undefined symbol
6: #----------------------------------------------------------------------#
6: #NOTE X does not work, need to use x! X is used to search for X character directly used in sequences!
6: $PFSEARCHV3 'pattern{S-x-C-C-x-K-F}' ./VAV_HUMAN.seq >$TMPDIR/undefined-pattern.hit
6: $PFSEARCHV3 'regex{S.CC.KF}' ./VAV_HUMAN.seq >$TMPDIR/undefined-regexp.hit
6: diff -b $TMPDIR/undefined-pattern.hit patterns/undefined.hit # expecting no difference
6: diff -b $TMPDIR/undefined-regexp.hit patterns/undefined.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search with ambiguities
6: #----------------------------------------------------------------------#
6: $PFSEARCHV3 'pattern{Y-D-C-[VE]-[EV]-N-E-E}' ./VAV_HUMAN.seq >$TMPDIR/ambiguities-pattern.hit
6: $PFSEARCHV3 'regex{YDC[VE][EV]NEE}' ./VAV_HUMAN.seq >$TMPDIR/ambiguities-regexp.hit
6: diff -b $TMPDIR/ambiguities-pattern.hit patterns/ambiguities.hit # expecting no difference
6: diff -b $TMPDIR/ambiguities-regexp.hit patterns/ambiguities.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search with ambiguities excluded
6: #----------------------------------------------------------------------#
6: $PFSEARCHV3 'pattern{M-V-P-M-{PY}-R-V-L-K}' ./VAV_HUMAN.seq >$TMPDIR/ambiguities_excluded-pattern.hit
6: $PFSEARCHV3 'regex{MVPM[^PY]RVLK}' ./VAV_HUMAN.seq >$TMPDIR/ambiguities_excluded-regexp.hit
6: diff -b $TMPDIR/ambiguities_excluded-pattern.hit patterns/ambiguities_excluded.hit # expecting no difference
6: diff -b $TMPDIR/ambiguities_excluded-regexp.hit patterns/ambiguities_excluded.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search with repetition of element(s)
6: #----------------------------------------------------------------------#
6: $PFSEARCHV3 'pattern{R-D(2)-S(2)-G-D}' ./VAV_HUMAN.seq >$TMPDIR/repetition-pattern.hit
6: $PFSEARCHV3 'regex{RD{2}S{2}GD}' ./VAV_HUMAN.seq >$TMPDIR/repetition-regexp.hit
6: $PFSEARCHV3 'pattern{E-L-K(2,3)-W-M}' ./VAV_HUMAN.seq >$TMPDIR/repetition_range-pattern.hit
6: $PFSEARCHV3 'regex{ELK{2,3}WM}' ./VAV_HUMAN.seq >$TMPDIR/repetition_range-regexp.hit
6: diff -b $TMPDIR/repetition-pattern.hit patterns/repetition.hit # expecting no difference
6: diff -b $TMPDIR/repetition-regexp.hit patterns/repetition.hit # expecting no difference
6: diff -b $TMPDIR/repetition_range-pattern.hit patterns/repetition_range.hit # expecting no difference
6: diff -b $TMPDIR/repetition_range-regexp.hit patterns/repetition_range.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search with anchor to either the N- or C-terminal of a sequence
6: #----------------------------------------------------------------------#
6: #FIXME pattern anchors do not work! So don't know if it has to be < or <-
6: #FIXME regexp anchor does not look to accept $!
6: $PFSEARCHV3 'pattern{<M-E-L-x(2)-Q-C}' ./VAV_HUMAN.seq >$TMPDIR/anchorN-pattern.hit
6: $PFSEARCHV3 'regex{^MEL.{2}QC}' ./VAV_HUMAN.seq >$TMPDIR/anchorN-regexp.hit
6: $PFSEARCHV3 'regex{\AMEL.{2}QC}' ./VAV_HUMAN.seq >$TMPDIR/anchorNalt-regexp.hit
6: $PFSEARCHV3 'pattern{V-E(2)-D-Y-S-E-Y-C>}' ./VAV_HUMAN.seq >$TMPDIR/anchorC-pattern.hit
6: $PFSEARCHV3 'regex{VE{2}DYSEYC\E}' ./VAV_HUMAN.seq >$TMPDIR/anchorC-regexp.hit
6: #diff -b $TMPDIR/anchorN-pattern.hit patterns/anchorN.hit # expecting no difference
6: diff -b $TMPDIR/anchorN-regexp.hit patterns/anchorN.hit # expecting no difference
6: #diff -b $TMPDIR/anchorC-pattern.hit patterns/anchorC.hit # expecting no difference
6: diff -b $TMPDIR/anchorC-regexp.hit patterns/anchorC.hit # expecting no difference
6:
6: #----------------------------------------------------------------------#
6: # Search giving multiple matches per sequences
6: #----------------------------------------------------------------------#
6: $PFSEARCHV3 'pattern{x(6)-A-x-[YRFQ]-D}' ./VAV_HUMAN.seq >$TMPDIR/multiple_matches-pattern.hit
6: $PFSEARCHV3 'regex{.{6}A.[YRFQ]D}' ./VAV_HUMAN.seq >$TMPDIR/multiple_matches-regexp.hit
6: diff -b $TMPDIR/multiple_matches-pattern.hit patterns/multiple_matches.hit # expecting no difference
6: diff -b $TMPDIR/multiple_matches-regexp.hit patterns/multiple_matches.hit # expecting no difference
6:
6: # Cleaning
6: rm -Rf $TMPDIR
6:
6/6 Test #6: execute_test_pfsearchV3_pattern-regexp.sh ... Passed 0.65 sec
100% tests passed, 0 tests failed out of 6
Total Test time (real) = 166.26 sec
make[2]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12'
create-stamp debian/debhelper-build-stamp
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
dh_auto_install
cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/pftools-3.2.12/debian/pftools AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/pftools-3.2.12 -B/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/./LICENSE
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/./README.md
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/./README.pftools.v2.3.md
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/./ChangeLog
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfsearchV3
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfscanV3
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfcalibrateV3
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfemit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfpam
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfdump
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfindex
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/gtop
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/htop
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/ptoh
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/ptof
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfw
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/2ft
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/6ft
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/psa2msa
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfscale
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfsearch
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfscan
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/pfmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/compare_2_profiles.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/fasta_to_fastq.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/make_iupac_cmp.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/ps_scan.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/scramble_fasta.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/sort_fasta.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/bin/split_profile_file.pl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/calibration/window20.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/calibration/reversed.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/cmp/blosum100.cmp
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-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/cmp/pam80.cmp
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/forward.msa
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/forward.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/forward.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/forward_dna.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/forward_dna_shift5.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/reverse.msa
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-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/reverse/reverse.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/familyProfile/DoubleProfile.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/familyProfile/sequence.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/data/familyProfile/sh2.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sh3.msf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/ecp.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/ambiguities_excluded.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/anchorC.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/anchorN.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/repetition_range.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/fully_defined.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/ambiguities.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/multiple_matches.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/repetition.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/patterns/undefined.hit
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/standard.random
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/R76849.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/all.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/CVPBR322.embl
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_pfsearchV3_iupac.pl.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sh3.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/PS00741_PS50010.dat
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sample.fastq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_V2.sh.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/hiv.fastq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/all.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/htop_issue.hmm
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/rand_dna.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_V3.sh.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/coils.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_V3_output.sh.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/MYSA_HUMAN
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/Toolbox.pm
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/rand_dna.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/RF00177.msa
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/VAV_RAT.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/hiv.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_pfsearchV3_pattern-regexp.sh.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sh3.gpr
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sh2.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/pfam_sh3.hmm
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/VAV_HUMAN.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/score.lis
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_scan_search.pl.cmake
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/sh3.seq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/SRR9619541.sample.fastq
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/prosite13.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/GTPA_HUMAN.dat
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/test_V3.out
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/examples/16S.prf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/doc/profile.pdf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/doc/profile.txt
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/doc/posterPfsearchV3SIBdays2013_v0.3.pdf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/doc/btt129.pdf
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/2ft.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/6ft.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/gtop.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/htop.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfmake.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfscale.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfscan.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfsearch.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfsearchV2.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/pfw.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/psa2msa.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/ptof.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man1/ptoh.1
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man5/psa.5
-- Installing: /build/reproducible-path/pftools-3.2.12/debian/pftools/usr/share/man/man5/xpsa.5
make[2]: Leaving directory '/build/reproducible-path/pftools-3.2.12/obj-x86_64-linux-gnu'
# Avoid name spacing conflict with htop and consequently also rename gtop
mv debian/pftools/usr/bin/gtop debian/pftools/usr/bin/pfgtop
mv debian/pftools/usr/bin/htop debian/pftools/usr/bin/pfhtop
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12'
dh_installdocs
dh_installchangelogs
debian/rules override_dh_installexamples
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
dh_installexamples
cp -a debian/pftools/usr/share/examples/* debian/pftools/usr/share/doc/pftools/examples/
rm -rf debian/pftools/usr/share/data/ debian/pftools/usr/share/examples/
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12'
debian/rules override_dh_installman
make[1]: Entering directory '/build/reproducible-path/pftools-3.2.12'
dh_installman
mv debian/pftools/usr/share/man/man1/gtop.1 debian/pftools/usr/share/man/man1/pfgtop.1
mv debian/pftools/usr/share/man/man1/htop.1 debian/pftools/usr/share/man/man1/pfhtop.1
mv debian/pftools/usr/share/doc/*.pdf debian/pftools/usr/share/doc/pftools/
rm -f debian/pftools/usr/share/doc/*.txt debian/pftools/usr/ChangeLog debian/pftools/usr/README* debian/pftools/usr/LICENSE
make[1]: Leaving directory '/build/reproducible-path/pftools-3.2.12'
dh_lintian
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_dwz -a
dwz: dwz: debian/pftools/usr/bin/pfscale: DWARF compression not beneficial - old size 41840 new size 42346
debian/pftools/usr/bin/pfhtop: DWARF compression not beneficial - old size 40382 new size 40893
dwz: dwz: dwz: debian/pftools/usr/bin/ptof: DWARF compression not beneficial - old size 40280 new size 40563
debian/pftools/usr/bin/ptoh: DWARF compression not beneficial - old size 35009 new size 35617debian/pftools/usr/bin/pfmake: DWARF compression not beneficial - old size 52083 new size 53216
dwz: debian/pftools/usr/bin/pfscan: DWARF compression not beneficial - old size 66032 new size 69367
dwz: debian/pftools/usr/bin/pfsearch: DWARF compression not beneficial - old size 68270 new size 71786
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/pftools/usr/bin/pfmake debian/pftools/usr/bin/6ft debian/pftools/usr/bin/pfscale debian/pftools/usr/bin/psa2msa debian/pftools/usr/bin/pfscan debian/pftools/usr/bin/ptoh debian/pftools/usr/bin/2ft debian/pftools/usr/bin/pfhtop debian/pftools/usr/bin/ptof debian/pftools/usr/bin/pfgtop debian/pftools/usr/bin/pfsearch debian/pftools/usr/bin/pfw were not linked against libgcc_s.so.1 (they use none of the library's symbols)
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: package pftools: substitution variable ${perl:Depends} unused, but is defined
dpkg-gencontrol: warning: package pftools: substitution variable ${perl:Depends} unused, but is defined
dh_md5sums
dh_builddeb
dpkg-deb: building package 'pftools' in '../pftools_3.2.12-1_amd64.deb'.
dpkg-deb: building package 'pftools-dbgsym' in '../pftools-dbgsym_3.2.12-1_amd64.deb'.
dpkg-genbuildinfo --build=binary -O../pftools_3.2.12-1_amd64.buildinfo
dpkg-genchanges --build=binary -O../pftools_3.2.12-1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/398247 and its subdirectories
I: Current time: Mon Apr 13 08:55:34 -12 2026
I: pbuilder-time-stamp: 1776113734
Tue Mar 11 14:32:39 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net.
Tue Mar 11 14:32:39 UTC 2025 I: Preparing to do remote build '2' on ionos1-amd64.debian.net.
Tue Mar 11 14:46:50 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net.
Tue Mar 11 14:46:51 UTC 2025 I: pftools_3.2.12-1_amd64.changes:
Format: 1.8
Date: Sat, 26 Mar 2022 21:23:28 +0530
Source: pftools
Binary: pftools pftools-dbgsym
Architecture: amd64
Version: 3.2.12-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Nilesh Patra <nilesh@debian.org>
Description:
pftools - build and search protein and DNA generalized profiles
Changes:
pftools (3.2.12-1) unstable; urgency=medium
.
* Team Upload.
* New upstream version 3.2.12
* Refresh patches
* d/rules:
+ Re-enable regex support now that pcre2 support is added
+ Add linker flags for pcre2 to LDFLAGS
* d/control: Add libpcre2-dev to B-D
Checksums-Sha1:
c3eb094ba69852c1df2f7e6e682365fde4225145 1179420 pftools-dbgsym_3.2.12-1_amd64.deb
085a90f0789dc8249b37c0802db519a890c88b75 6455 pftools_3.2.12-1_amd64.buildinfo
f25b8cd0e634ceb79412be883774da0b5c8b8ceb 24792092 pftools_3.2.12-1_amd64.deb
Checksums-Sha256:
48a7259fbd6107a927a367b541e9eb10d1a4a288aeb0b0470299821edd673cc0 1179420 pftools-dbgsym_3.2.12-1_amd64.deb
98cbeab7bb3c7ab3212d8610ce848aaa4afe6ea751f9ce931df2e72852530abe 6455 pftools_3.2.12-1_amd64.buildinfo
b71ea571d941ef696996e4da311bbdc0bba99c25f97d305e152a67bd98a0b4b9 24792092 pftools_3.2.12-1_amd64.deb
Files:
ed922e6697c4910a88bc6e8e59ff0598 1179420 debug optional pftools-dbgsym_3.2.12-1_amd64.deb
153f615186d2f8d15dfb73527bb2cab4 6455 science optional pftools_3.2.12-1_amd64.buildinfo
d5dedfb848c8a36366448e753283269a 24792092 science optional pftools_3.2.12-1_amd64.deb
Tue Mar 11 14:46:52 UTC 2025 I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-amd64_26-34090.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/pftools_3.2.12-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/pftools_3.2.12-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/pftools_3.2.12-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/b1/pftools_3.2.12-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.qARvoeJJ/b2/pftools_3.2.12-1_amd64.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.003s)
0.003s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 220ms
CPU time consumed: 222ms
Tue Mar 11 14:46:52 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists.
Tue Mar 11 14:46:52 UTC 2025 I: pftools from trixie built successfully and reproducibly on amd64.
Tue Mar 11 14:46:53 UTC 2025 I: Submitting .buildinfo files to external archives:
Tue Mar 11 14:46:53 UTC 2025 I: Submitting 8.0K b1/pftools_3.2.12-1_amd64.buildinfo.asc
Tue Mar 11 14:46:55 UTC 2025 I: Submitting 8.0K b2/pftools_3.2.12-1_amd64.buildinfo.asc
Tue Mar 11 14:46:55 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Tue Mar 11 14:46:55 UTC 2025 I: Done submitting .buildinfo files.
Tue Mar 11 14:46:55 UTC 2025 I: Removing signed pftools_3.2.12-1_amd64.buildinfo.asc files:
removed './b1/pftools_3.2.12-1_amd64.buildinfo.asc'
removed './b2/pftools_3.2.12-1_amd64.buildinfo.asc'