Thu Mar 13 02:52:13 UTC 2025 I: starting to build phipack/trixie/amd64 on jenkins on '2025-03-13 02:51' Thu Mar 13 02:52:13 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_26/34284/console.log Thu Mar 13 02:52:13 UTC 2025 I: Downloading source for trixie/phipack=0.0.20160614-5 --2025-03-13 02:52:13-- http://deb.debian.org/debian/pool/main/p/phipack/phipack_0.0.20160614-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2021 (2.0K) [text/prs.lines.tag] Saving to: ‘phipack_0.0.20160614-5.dsc’ 0K . 100% 284M=0s 2025-03-13 02:52:13 (284 MB/s) - ‘phipack_0.0.20160614-5.dsc’ saved [2021/2021] Thu Mar 13 02:52:13 UTC 2025 I: phipack_0.0.20160614-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: phipack Binary: phipack Architecture: any Version: 0.0.20160614-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://www.maths.otago.ac.nz/~dbryant/software/phimanual.pdf Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/phipack Vcs-Git: https://salsa.debian.org/med-team/phipack.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: phipack deb science optional arch=any Checksums-Sha1: 54f764223d3d92f91501a88ab643f6ce2b0d8ab1 54192 phipack_0.0.20160614.orig.tar.xz fd58cd8dfdbe3aa4d67cd2059176fabd24d56544 6792 phipack_0.0.20160614-5.debian.tar.xz Checksums-Sha256: 3942fa6b4c19b01d76a480321fe3d155bce2d0b02ac1f4c294f4418d22110952 54192 phipack_0.0.20160614.orig.tar.xz 6a4c719be1943400452c2be9b9aed7f1b3ce5d674b957a93ee5880484ba9de36 6792 phipack_0.0.20160614-5.debian.tar.xz Files: b58097108c19846ebd8473be57f6cf9c 54192 phipack_0.0.20160614.orig.tar.xz 342d20eac4d2dbbb730230abac692b90 6792 phipack_0.0.20160614-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl9YdxARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGhDxAAkxKPhn3zHShjCnprjbHU7TZWtQnXGvYW xxlOnwNICitkVO+/ya/NGN78qKNMVFm9+WuPju+wKRSCHDYUTw5quQgzOcx+bkZ8 F6S1CrBx/c9zHdiDFngDGfONQ+6YC+NdnHCX66XnozIewyTOV8dVAttN5QXkXCJp rqXHf/7lLp7A15SJyktlVeByNpcDIpm2KplUMy6NCYOX54cC6ipm5+6UOld6vePK UfbKoMeH0Ka1h4alyi9FYx/bje735BhDI4lDXgErYb/N+aHxZWFfNXFxFj+rFf+a LNsBHLH49c2IwCP+M083qRWxV5DsGh5emASfjh0myqoev3MxNCNK97wcAC/axLm/ wnUzb2on91w90Fi5/UZENZCtMu4vs1vsR6uarDGgFBRGk+IM9ievZcB4OtknCdv1 S78Hb/o5J45C1p78kZoew1dqAcvWKz038IbPRiGnCReNp2WUP+bWf2nDUCtx/D/4 mirB88nR8A3GCGk4V4TFMopuXSvBScEDnore3HLbWMTXfdmYwfttpkO4orYzqf/f bdmDsysVkxRMFpTGVUzrNnJ46N18y50Fmkx4vPitbcZEbqbZGQvzwEuiK1FPh+iY ZtrHAl0vdvoUB79RuWG63CCD0jwVota/LvpPwGXPIoK2IYKK5en8fBrqFHVaRMI/ MdgqxKKEe/s= =38F6 -----END PGP SIGNATURE----- Thu Mar 13 02:52:13 UTC 2025 I: Checking whether the package is not for us Thu Mar 13 02:52:13 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net. Thu Mar 13 02:52:13 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Thu Mar 13 02:52:47 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Apr 14 21:15:14 -12 2026 I: pbuilder-time-stamp: 1776244515 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [phipack_0.0.20160614-5.dsc] I: copying [./phipack_0.0.20160614.orig.tar.xz] I: copying [./phipack_0.0.20160614-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./phipack_0.0.20160614-5.dsc: unsupported subcommand dpkg-source: info: extracting phipack in phipack-0.0.20160614 dpkg-source: info: unpacking phipack_0.0.20160614.orig.tar.xz dpkg-source: info: unpacking phipack_0.0.20160614-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying cross.patch dpkg-source: info: applying phipack.unsigned.char.fixes.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2565445/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='0354ef020cf7441c91cbd4ced2b2c13c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2565445' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/pbuilderrc_tBa2 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/b1 --logfile b1/build.log phipack_0.0.20160614-5.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2565445/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19801 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 20.6 MB of archives. After unpacking 77.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB] Fetched 20.6 MB in 2s (11.4 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19801 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-5_amd64.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_amd64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.41-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/phipack-0.0.20160614/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../phipack_0.0.20160614-5_source.changes dpkg-buildpackage: info: source package phipack dpkg-buildpackage: info: source version 0.0.20160614-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src cd src && make -j42 clean make[1]: Entering directory '/build/reproducible-path/phipack-0.0.20160614/src' rm -f *.o rm -f Phi rm -f Profile make[1]: Leaving directory '/build/reproducible-path/phipack-0.0.20160614/src' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules binary dh binary --sourcedirectory=src dh_update_autotools_config -O--sourcedirectory=src dh_autoreconf -O--sourcedirectory=src dh_auto_configure -O--sourcedirectory=src dh_auto_build -O--sourcedirectory=src cd src && make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/phipack-0.0.20160614/src' gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall normal.c -o normal.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall stats.c -o stats.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall maxChi.c -o maxChi.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall main.c -o main.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall queue.c -o queue.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall graphCode.c -o graphCode.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall fasta.c -o fasta.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall phylip.c -o phylip.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall mem.c -o mem.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall misc.c -o misc.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall pairScore.c -o pairScore.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall seqManip.c -o seqManip.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall global.c -o global.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall profile.c -o profile.o graphCode.c:2:2: warning: "/*" within comment [-Wcomment] 2 | /* This file is part of PhiPack. stats.c: In function 'PHI': stats.c:112:24: warning: variable 'states_j' set but not used [-Wunused-but-set-variable] 112 | int p_i,p_j,states_i,states_j; | ^~~~~~~~ stats.c:112:15: warning: variable 'states_i' set but not used [-Wunused-but-set-variable] 112 | int p_i,p_j,states_i,states_j; | ^~~~~~~~ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -o Profile normal.o stats.o fasta.o phylip.o mem.o misc.o pairScore.o seqManip.o global.o profile.o -lm -Wl,-z,relro -Wl,-z,now cp Profile ../ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -o Phi normal.o stats.o maxChi.o main.o queue.o graphCode.o fasta.o phylip.o mem.o misc.o pairScore.o seqManip.o global.o -lm -Wl,-z,relro -Wl,-z,now cp Phi ../ cd ppma_2_bmp && make make[2]: Entering directory '/build/reproducible-path/phipack-0.0.20160614/src/ppma_2_bmp' g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/phipack-0.0.20160614=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -o ppma_2_bmp ppma_io.C bmp_io.C ppma_2_bmp.C -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/phipack-0.0.20160614/src/ppma_2_bmp' cp ppma_2_bmp/ppma_2_bmp ../ make[1]: Leaving directory '/build/reproducible-path/phipack-0.0.20160614/src' dh_auto_test -O--sourcedirectory=src create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=src dh_prep -O--sourcedirectory=src dh_auto_install --destdir=debian/phipack/ -O--sourcedirectory=src dh_install -O--sourcedirectory=src dh_installdocs -O--sourcedirectory=src dh_installchangelogs -O--sourcedirectory=src dh_installexamples -O--sourcedirectory=src dh_installman -O--sourcedirectory=src dh_installsystemduser -O--sourcedirectory=src dh_perl -O--sourcedirectory=src dh_link -O--sourcedirectory=src dh_strip_nondeterminism -O--sourcedirectory=src dh_compress -O--sourcedirectory=src dh_fixperms -O--sourcedirectory=src dh_missing -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src dwz: debian/phipack/usr/lib/debian-med/bin/ppma_2_bmp: DWARF compression not beneficial - old size 160371 new size 161801 dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dh_installdeb -O--sourcedirectory=src dh_gencontrol -O--sourcedirectory=src dh_md5sums -O--sourcedirectory=src dh_builddeb -O--sourcedirectory=src dpkg-deb: building package 'phipack' in '../phipack_0.0.20160614-5_amd64.deb'. dpkg-deb: building package 'phipack-dbgsym' in '../phipack-dbgsym_0.0.20160614-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../phipack_0.0.20160614-5_amd64.buildinfo dpkg-genchanges --build=binary -O../phipack_0.0.20160614-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2565445 and its subdirectories I: Current time: Tue Apr 14 21:15:46 -12 2026 I: pbuilder-time-stamp: 1776244546 Thu Mar 13 02:52:47 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Thu Mar 13 02:52:47 UTC 2025 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Thu Mar 13 02:56:08 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Thu Mar 13 02:56:09 UTC 2025 I: phipack_0.0.20160614-5_amd64.changes: Format: 1.8 Date: Wed, 09 Sep 2020 08:30:55 +0200 Source: phipack Binary: phipack phipack-dbgsym Architecture: amd64 Version: 0.0.20160614-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: phipack - PHI test and other tests of recombination Closes: 968242 969552 Changes: phipack (0.0.20160614-5) unstable; urgency=medium . * Add salsa-ci file (routine-update) * Fix compiler variable to enable cross building Closes: #968242 * Force signed char on every architecture (Thanks a lot to Lennart Sorensen) Closes: #969552 Checksums-Sha1: 42d179db15d535909852007c0c4772584148e002 194524 phipack-dbgsym_0.0.20160614-5_amd64.deb 4ed7afdbe93bae14b2dc8b931cfdc2b8f6396196 4925 phipack_0.0.20160614-5_amd64.buildinfo 5de72b20c6e1596457a56d9e10b42521d3c4f626 55100 phipack_0.0.20160614-5_amd64.deb Checksums-Sha256: 283fcbe88620513019d899a638d20c320a5cf2684f9ca0d502dc394499ee8ba1 194524 phipack-dbgsym_0.0.20160614-5_amd64.deb fbe8aa067d358d3a8ed4acd93276ad602a7eff8d5a0f691b2f29a47397be301d 4925 phipack_0.0.20160614-5_amd64.buildinfo 98bd74ddf861d9b9e8cdf847f582cd282a21adbd4a9389745236f75bd1cec481 55100 phipack_0.0.20160614-5_amd64.deb Files: d6d30aaa190678202c83da24bb2bd778 194524 debug optional phipack-dbgsym_0.0.20160614-5_amd64.deb cb88a37af806887b9584193de21a14b0 4925 science optional phipack_0.0.20160614-5_amd64.buildinfo d75143531af6ce74c1efbef3afa67e03 55100 science optional phipack_0.0.20160614-5_amd64.deb Thu Mar 13 02:56:10 UTC 2025 I: diffoscope 289 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_26-34284.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/phipack_0.0.20160614-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/phipack_0.0.20160614-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/phipack_0.0.20160614-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/b1/phipack_0.0.20160614-5_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.WrZ29gfm/b2/phipack_0.0.20160614-5_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 225ms CPU time consumed: 226ms Thu Mar 13 02:56:10 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists. Thu Mar 13 02:56:10 UTC 2025 I: phipack from trixie built successfully and reproducibly on amd64. Thu Mar 13 02:56:11 UTC 2025 I: Submitting .buildinfo files to external archives: Thu Mar 13 02:56:11 UTC 2025 I: Submitting 8.0K b1/phipack_0.0.20160614-5_amd64.buildinfo.asc Thu Mar 13 02:56:12 UTC 2025 I: Submitting 8.0K b2/phipack_0.0.20160614-5_amd64.buildinfo.asc Thu Mar 13 02:56:13 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Mar 13 02:56:13 UTC 2025 I: Done submitting .buildinfo files. Thu Mar 13 02:56:13 UTC 2025 I: Removing signed phipack_0.0.20160614-5_amd64.buildinfo.asc files: removed './b1/phipack_0.0.20160614-5_amd64.buildinfo.asc' removed './b2/phipack_0.0.20160614-5_amd64.buildinfo.asc'