Sat Mar 1 11:09:23 UTC 2025 I: starting to build python-epimodels/trixie/amd64 on jenkins on '2025-03-01 11:08'
Sat Mar 1 11:09:23 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_18/32040/console.log
Sat Mar 1 11:09:23 UTC 2025 I: Downloading source for trixie/python-epimodels=0.4.0-4
--2025-03-01 11:09:23-- http://deb.debian.org/debian/pool/main/p/python-epimodels/python-epimodels_0.4.0-4.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2290 (2.2K) [text/prs.lines.tag]
Saving to: ‘python-epimodels_0.4.0-4.dsc’
0K .. 100% 396M=0s
2025-03-01 11:09:23 (396 MB/s) - ‘python-epimodels_0.4.0-4.dsc’ saved [2290/2290]
Sat Mar 1 11:09:23 UTC 2025 I: python-epimodels_0.4.0-4.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: python-epimodels
Binary: python3-epimodels
Architecture: all
Version: 0.4.0-4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/fccoelho/epimodels
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/python-epimodels
Vcs-Git: https://salsa.debian.org/med-team/python-epimodels.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all, python3-pytest
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-setuptools-scm, python3-wheel <!nocheck>, python3-matplotlib <!nocheck>, python3-scipy <!nocheck>, python3-pytest <!nocheck>, python3-pytest-cov <!nocheck>
Package-List:
python3-epimodels deb python optional arch=all
Checksums-Sha1:
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07306d09adbedbd929cdbab28e6b9c67a0710c0b 3788 python-epimodels_0.4.0-4.debian.tar.xz
Checksums-Sha256:
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aa3f124d2a01aa536d8387020fc8bfa2bd703ed3ba9c0a320dbef52f811f220e 3788 python-epimodels_0.4.0-4.debian.tar.xz
Files:
27e2294b0f2c29fda9fb271915820398 18424 python-epimodels_0.4.0.orig.tar.gz
816b9d696c7972820bc4d18526901373 3788 python-epimodels_0.4.0-4.debian.tar.xz
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Sat Mar 1 11:09:23 UTC 2025 I: Checking whether the package is not for us
Sat Mar 1 11:09:23 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net.
Sat Mar 1 11:09:23 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net.
Sat Mar 1 11:11:34 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Fri Apr 3 05:32:25 -12 2026
I: pbuilder-time-stamp: 1775237545
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [python-epimodels_0.4.0-4.dsc]
I: copying [./python-epimodels_0.4.0.orig.tar.gz]
I: copying [./python-epimodels_0.4.0-4.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./python-epimodels_0.4.0-4.dsc: unsupported subcommand
dpkg-source: info: extracting python-epimodels in python-epimodels-0.4.0
dpkg-source: info: unpacking python-epimodels_0.4.0.orig.tar.gz
dpkg-source: info: unpacking python-epimodels_0.4.0-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_pyscaffold.patch
dpkg-source: info: applying no_install_depends_cython.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2240815/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 '
DISTRIBUTION='trixie'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='3e904cb263dc4cc29c231f9f001fd227'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='2240815'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/pbuilderrc_tus0 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/b1 --logfile b1/build.log python-epimodels_0.4.0-4.dsc'
SUDO_GID='110'
SUDO_UID='105'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://213.165.73.152:3128'
I: uname -a
Linux ionos5-amd64 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/2240815/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-matplotlib, python3-scipy, python3-pytest, python3-pytest-cov
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19802 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-all; however:
Package python3-all is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools-scm; however:
Package python3-setuptools-scm is not installed.
pbuilder-satisfydepends-dummy depends on python3-wheel; however:
Package python3-wheel is not installed.
pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
Package python3-matplotlib is not installed.
pbuilder-satisfydepends-dummy depends on python3-scipy; however:
Package python3-scipy is not installed.
pbuilder-satisfydepends-dummy depends on python3-pytest; however:
Package python3-pytest is not installed.
pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however:
Package python3-pytest-cov is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgcrypt20{a} libgfortran5{a} libglib2.0-0t64{a} libgpg-error0{a} libgraphite2-3{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-brotli{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-fonttools{a} python3-fs{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-pytz{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-sympy{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-wheel{a} python3-zipp{a} python3.12-tk{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a}
The following packages are RECOMMENDED but will NOT be installed:
ca-certificates curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libgpg-error-l10n libltdl-dev libmail-sendmail-perl lynx python3-bs4 python3-cssselect python3-html5lib python3-olefile python3-pooch python3-pygments shared-mime-info wget xdg-user-dirs
0 packages upgraded, 148 newly installed, 0 to remove and 0 not upgraded.
Need to get 94.7 MB of archives. After unpacking 385 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.2-1 [27.1 kB]
Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 12.0.0 [28.9 kB]
Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2025a-2 [259 kB]
Get: 8 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 9 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 10 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 11 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get: 12 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get: 13 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.2-1 [10.0 kB]
Get: 14 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.2-1 [28.1 kB]
Get: 15 http://deb.debian.org/debian trixie/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-2+b1 [138 kB]
Get: 16 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.1-2 [160 kB]
Get: 17 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-16 [836 kB]
Get: 18 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB]
Get: 19 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:2.2.3+ds-2+b1 [5081 kB]
Get: 20 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 21 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 22 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 23 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 24 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 25 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 26 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 27 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 28 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 29 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 30 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-5 [294 kB]
Get: 31 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB]
Get: 32 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 33 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB]
Get: 34 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 35 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB]
Get: 36 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 37 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.47-1 [282 kB]
Get: 38 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 39 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 40 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 41 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB]
Get: 42 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB]
Get: 43 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 44 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 45 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 46 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 47 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 48 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB]
Get: 49 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB]
Get: 50 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get: 51 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+24 [217 kB]
Get: 52 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB]
Get: 53 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB]
Get: 54 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB]
Get: 55 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B]
Get: 56 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 57 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-3 [539 kB]
Get: 58 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 59 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 60 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 61 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 62 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 63 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 64 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 65 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 66 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB]
Get: 67 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 68 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 69 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 70 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB]
Get: 71 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 72 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 73 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 74 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 75 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 76 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 77 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 78 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 79 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 80 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 81 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.8.0-1 [724 kB]
Get: 82 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20250108 [113 kB]
Get: 83 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.3-1 [190 kB]
Get: 84 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get: 85 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB]
Get: 86 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB]
Get: 87 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get: 88 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.83.4-1 [1512 kB]
Get: 89 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 90 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB]
Get: 91 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get: 92 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 93 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get: 94 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 95 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-hotkeys all 0.2.0-1 [12.6 kB]
Get: 96 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B]
Get: 97 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-metadata all 12-4 [6532 B]
Get: 98 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [184 kB]
Get: 99 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB]
Get: 100 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 101 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get: 102 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 103 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 104 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.3-1 [204 kB]
Get: 105 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get: 106 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB]
Get: 107 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB]
Get: 108 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB]
Get: 109 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 110 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB]
Get: 111 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB]
Get: 112 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB]
Get: 113 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB]
Get: 114 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.13.2-1 [1048 B]
Get: 115 http://deb.debian.org/debian trixie/main amd64 python3-attr all 25.1.0-1 [68.7 kB]
Get: 116 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB]
Get: 117 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB]
Get: 118 http://deb.debian.org/debian trixie/main amd64 python3-coverage amd64 7.6.0+dfsg1-2+b2 [175 kB]
Get: 119 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get: 120 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 121 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 122 http://deb.debian.org/debian trixie/main amd64 python3-pytz all 2025.1-3 [150 kB]
Get: 123 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2025.1-3 [4004 B]
Get: 124 http://deb.debian.org/debian trixie/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB]
Get: 125 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-6 [95.1 kB]
Get: 126 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB]
Get: 127 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.4.0+dfsg-1+b1 [25.5 kB]
Get: 128 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.14.1-4+b1 [17.1 MB]
Get: 129 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get: 130 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.3-1 [4147 kB]
Get: 131 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB]
Get: 132 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get: 133 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.55.3-2+b1 [1448 kB]
Get: 134 http://deb.debian.org/debian trixie/main amd64 python3-iniconfig all 1.1.1-2 [6396 B]
Get: 135 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB]
Get: 136 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB]
Get: 137 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.9-1 [113 kB]
Get: 138 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB]
Get: 139 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.13.1-1+b1 [9760 B]
Get: 140 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB]
Get: 141 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get: 142 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get: 143 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3+b3 [5650 kB]
Get: 144 http://deb.debian.org/debian trixie/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get: 145 http://deb.debian.org/debian trixie/main amd64 python3-pytest all 8.3.4-1 [250 kB]
Get: 146 http://deb.debian.org/debian trixie/main amd64 python3-pytest-cov all 5.0.0-1 [26.8 kB]
Get: 147 http://deb.debian.org/debian trixie/main amd64 python3-setuptools-scm all 8.2.0-1 [41.0 kB]
Get: 148 http://deb.debian.org/debian trixie/main amd64 python3-wheel all 0.45.1-1 [56.7 kB]
Fetched 94.7 MB in 1s (102 MB/s)
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up libxext6:amd64 (2:1.3.4-1+b3) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up libglib2.0-0t64:amd64 (2.83.4-1) ...
No schema files found: doing nothing.
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ...
Setting up libjs-jquery-metadata (12-4) ...
Setting up libjs-jquery-isonscreen (1.2.0-1.1) ...
Setting up libreadline8t64:amd64 (8.2-6) ...
Setting up dh-strip-nondeterminism (1.14.1-2) ...
Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ...
Setting up groff-base (1.23.0-7) ...
Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ...
Setting up libharfbuzz0b:amd64 (10.2.0-1) ...
Setting up libxss1:amd64 (1:1.2.3-1+b3) ...
Setting up libfontconfig1:amd64 (2.15.0-2) ...
Setting up libpython3.13-stdlib:amd64 (3.13.2-1) ...
Setting up libpython3-stdlib:amd64 (3.13.2-1) ...
Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Setting up libxft2:amd64 (2.3.6-1+b4) ...
Setting up python3.13 (3.13.2-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libtk8.6:amd64 (8.6.16-1) ...
Setting up python3.12-tk (3.12.9-1) ...
Setting up python3 (3.13.2-1) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-wheel (0.45.1-1) ...
Setting up python3.13-tk (3.13.2-1) ...
Setting up python3-platformdirs (4.3.6-1) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-packaging (24.2-1) ...
Setting up python3-pyparsing (3.1.2-1) ...
Setting up python3-brotli (1.1.0-2+b7) ...
Setting up libraqm0:amd64 (0.10.2-1) ...
Setting up python3-cycler (0.12.1-1) ...
Setting up python3-kiwisolver (1.4.7-3+b1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up python3-numpy (1:2.2.3+ds-2+b1) ...
Setting up python3-pluggy (1.5.0-1) ...
Setting up python3-lxml:amd64 (5.3.1-1+b1) ...
Setting up python3-dateutil (2.9.0-3) ...
Setting up python3-contourpy (1.3.1-1+b1) ...
Setting up python3-mpmath (1.3.0-1) ...
Setting up python3-more-itertools (10.6.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sympy (1.13.3-1) ...
Setting up python3-attr (25.1.0-1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up python3-scipy (1.14.1-4+b1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up python3-lz4 (4.4.0+dfsg-1+b1) ...
Setting up python3-pytest (8.3.4-1) ...
Setting up blt (2.5.3+dfsg-7) ...
Setting up python3-typeguard (4.4.2-1) ...
Setting up python3-all (3.13.2-1) ...
Setting up python3-coverage (7.6.0+dfsg1-2+b2) ...
Setting up python3-tk:amd64 (3.13.1-1+b1) ...
Setting up debhelper (13.24.1) ...
Setting up python3-pytz (2025.1-3) ...
Setting up python3-pytest-cov (5.0.0-1) ...
Setting up python3-tz (2025.1-3) ...
Setting up python3-fs (2.4.16-6) ...
Setting up python3-pil:amd64 (11.1.0-5+b1) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-pil.imagetk:amd64 (11.1.0-5+b1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-pkg-resources (75.8.0-1) ...
Setting up python3-setuptools (75.8.0-1) ...
Setting up python3-setuptools-scm (8.2.0-1) ...
Setting up dh-python (6.20250108) ...
Setting up python3-ufolib2 (0.17.0+dfsg1-1) ...
Setting up python3-fonttools (4.55.3-2+b1) ...
Setting up python3-matplotlib (3.8.3-3+b3) ...
Processing triggers for libc-bin (2.40-7) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/python-epimodels-0.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-epimodels_0.4.0-4_source.changes
dpkg-buildpackage: info: source package python-epimodels
dpkg-buildpackage: info: source version 0.4.0-4
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py clean
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'author-email' will not be supported in future
versions. Please use the underscore name 'author_email' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'long-description' will not be supported in future
versions. Please use the underscore name 'long_description' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
section = defn.get("tool", {})[tool_name]
~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
KeyError: 'setuptools_scm'
running clean
removing '/build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'author-email' will not be supported in future
versions. Please use the underscore name 'author_email' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'long-description' will not be supported in future
versions. Please use the underscore name 'long_description' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
section = defn.get("tool", {})[tool_name]
~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
KeyError: 'setuptools_scm'
running config
dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'author-email' will not be supported in future
versions. Please use the underscore name 'author_email' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'long-description' will not be supported in future
versions. Please use the underscore name 'long_description' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
section = defn.get("tool", {})[tool_name]
~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
KeyError: 'setuptools_scm'
running build
running build_py
creating /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels
copying src/epimodels/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels
creating /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/tools
copying src/epimodels/tools/phase.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/tools
copying src/epimodels/tools/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/tools
creating /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete
copying src/epimodels/discrete/models.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete
copying src/epimodels/discrete/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete
creating /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous
copying src/epimodels/continuous/models.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous
copying src/epimodels/continuous/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous
running egg_info
creating src/epimodels.egg-info
writing src/epimodels.egg-info/PKG-INFO
writing dependency_links to src/epimodels.egg-info/dependency_links.txt
writing requirements to src/epimodels.egg-info/requires.txt
writing top-level names to src/epimodels.egg-info/top_level.txt
writing manifest file 'src/epimodels.egg-info/SOURCES.txt'
reading manifest file 'src/epimodels.egg-info/SOURCES.txt'
adding license file 'LICENSE.txt'
adding license file 'AUTHORS.rst'
writing manifest file 'src/epimodels.egg-info/SOURCES.txt'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/python-epimodels-0.4.0'
dh_auto_test
I: pybuild base:311: cd /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build; python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0
rootdir: /build/reproducible-path/python-epimodels-0.4.0
configfile: setup.cfg
plugins: typeguard-4.4.2, cov-5.0.0
collected 18 items
tests/test_continuous_models.py ....... [ 38%]
tests/test_discrete_models.py ........... [100%]
============================== 18 passed in 1.47s ==============================
make[1]: Leaving directory '/build/reproducible-path/python-epimodels-0.4.0'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
dh_auto_install --destdir=debian/python3-epimodels/ -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'author-email' will not be supported in future
versions. Please use the underscore name 'author_email' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/dist.py:493: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'long-description' will not be supported in future
versions. Please use the underscore name 'long_description' instead.
This deprecation is overdue, please update your project and remove deprecated
calls to avoid build errors in the future.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
section = defn.get("tool", {})[tool_name]
~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
KeyError: 'setuptools_scm'
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing src/epimodels.egg-info/PKG-INFO
writing dependency_links to src/epimodels.egg-info/dependency_links.txt
writing requirements to src/epimodels.egg-info/requires.txt
writing top-level names to src/epimodels.egg-info/top_level.txt
reading manifest file 'src/epimodels.egg-info/SOURCES.txt'
adding license file 'LICENSE.txt'
adding license file 'AUTHORS.rst'
writing manifest file 'src/epimodels.egg-info/SOURCES.txt'
running install_lib
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/tools
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/tools/phase.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/tools
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/tools/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/tools
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete/models.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/discrete/__pycache__/models.cpython-313.pyc -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete/__pycache__
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous/models.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/continuous/__pycache__/models.cpython-313.pyc -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/__init__.py -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels
creating /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/__pycache__
copying /build/reproducible-path/python-epimodels-0.4.0/.pybuild/cpython3_3.13_epimodels/build/epimodels/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/__pycache__
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/tools/phase.py to phase.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/tools/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete/models.py to models.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/discrete/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous/models.py to models.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/continuous/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels/__init__.py to __init__.cpython-313.pyc
running install_egg_info
Copying src/epimodels.egg-info to /build/reproducible-path/python-epimodels-0.4.0/debian/python3-epimodels/usr/lib/python3.13/dist-packages/epimodels-0.4.0.egg-info
Skipping SOURCES.txt
running install_scripts
debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/python-epimodels-0.4.0'
dh_install
find debian -name .coverage -delete
make[1]: Leaving directory '/build/reproducible-path/python-epimodels-0.4.0'
dh_installdocs -O--buildsystem=pybuild
dh_installchangelogs -O--buildsystem=pybuild
dh_python3 -O--buildsystem=pybuild
dh_installsystemduser -O--buildsystem=pybuild
dh_perl -O--buildsystem=pybuild
dh_link -O--buildsystem=pybuild
dh_strip_nondeterminism -O--buildsystem=pybuild
dh_compress -O--buildsystem=pybuild
dh_fixperms -O--buildsystem=pybuild
dh_missing -O--buildsystem=pybuild
dh_installdeb -O--buildsystem=pybuild
dh_gencontrol -O--buildsystem=pybuild
dh_md5sums -O--buildsystem=pybuild
dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'python3-epimodels' in '../python3-epimodels_0.4.0-4_all.deb'.
dpkg-genbuildinfo --build=binary -O../python-epimodels_0.4.0-4_amd64.buildinfo
dpkg-genchanges --build=binary -O../python-epimodels_0.4.0-4_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/2240815 and its subdirectories
I: Current time: Fri Apr 3 05:34:33 -12 2026
I: pbuilder-time-stamp: 1775237673
Sat Mar 1 11:11:34 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net.
Sat Mar 1 11:11:34 UTC 2025 I: Preparing to do remote build '2' on ionos1-amd64.debian.net.
Sat Mar 1 11:14:33 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net.
Sat Mar 1 11:14:34 UTC 2025 I: python-epimodels_0.4.0-4_amd64.changes:
Format: 1.8
Date: Thu, 17 Oct 2024 16:05:35 +0200
Source: python-epimodels
Binary: python3-epimodels
Architecture: all
Version: 0.4.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
python3-epimodels - simple interface to simulate mathematical epidemic models in Pyth
Changes:
python-epimodels (0.4.0-4) unstable; urgency=medium
.
* Team upload.
* d/control: also remove numba from the binary dependency.
Checksums-Sha1:
ebe6c390bab5e08e56a60d1aa49b0d47864ab991 8387 python-epimodels_0.4.0-4_amd64.buildinfo
fbabc5728cd6d642ef6f17d0f80a43d0b7957f05 9896 python3-epimodels_0.4.0-4_all.deb
Checksums-Sha256:
ffc4eb9b933254af127a93d1dfde00fad185168c9945b9b77851dac5dd055d15 8387 python-epimodels_0.4.0-4_amd64.buildinfo
82e01010aa287749e3233268e07199b61c075b75781a003fe8e73d3e9124b3f9 9896 python3-epimodels_0.4.0-4_all.deb
Files:
f0a28b1517f612fb2e82e9ce6a79206c 8387 science optional python-epimodels_0.4.0-4_amd64.buildinfo
ad861c6e7f51287d0139007b31eabf3f 9896 python optional python3-epimodels_0.4.0-4_all.deb
Sat Mar 1 11:14:35 UTC 2025 I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-amd64_18-32040.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/python-epimodels_0.4.0-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/python-epimodels_0.4.0-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/python-epimodels_0.4.0-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/b1/python-epimodels_0.4.0-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.DQzZ1q0s/b2/python-epimodels_0.4.0-4_amd64.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.003s)
0.003s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 222ms
CPU time consumed: 222ms
Sat Mar 1 11:14:35 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists.
Sat Mar 1 11:14:35 UTC 2025 I: python-epimodels from trixie built successfully and reproducibly on amd64.
Sat Mar 1 11:14:36 UTC 2025 I: Submitting .buildinfo files to external archives:
Sat Mar 1 11:14:36 UTC 2025 I: Submitting 12K b1/python-epimodels_0.4.0-4_amd64.buildinfo.asc
Sat Mar 1 11:14:39 UTC 2025 I: Submitting 12K b2/python-epimodels_0.4.0-4_amd64.buildinfo.asc
Sat Mar 1 11:14:41 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Sat Mar 1 11:14:41 UTC 2025 I: Done submitting .buildinfo files.
Sat Mar 1 11:14:41 UTC 2025 I: Removing signed python-epimodels_0.4.0-4_amd64.buildinfo.asc files:
removed './b1/python-epimodels_0.4.0-4_amd64.buildinfo.asc'
removed './b2/python-epimodels_0.4.0-4_amd64.buildinfo.asc'