Fri Feb 14 04:44:34 UTC 2025 I: starting to build cassiopee/trixie/arm64 on jenkins on '2025-02-14 04:44' Fri Feb 14 04:44:34 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_10/57201/console.log Fri Feb 14 04:44:34 UTC 2025 I: Downloading source for trixie/cassiopee=1.0.9-4 --2025-02-14 04:44:34-- http://deb.debian.org/debian/pool/main/c/cassiopee/cassiopee_1.0.9-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2373 (2.3K) [text/prs.lines.tag] Saving to: ‘cassiopee_1.0.9-4.dsc’ 0K .. 100% 326M=0s 2025-02-14 04:44:34 (326 MB/s) - ‘cassiopee_1.0.9-4.dsc’ saved [2373/2373] Fri Feb 14 04:44:34 UTC 2025 I: cassiopee_1.0.9-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cassiopee Binary: cassiopee, libcassie-doc, libcassie1v5, libcassie-dev Architecture: any all Version: 1.0.9-4 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou Homepage: https://github.com/osallou/cassiopee-c Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/cassiopee Vcs-Git: https://salsa.debian.org/med-team/cassiopee.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev Package-List: cassiopee deb science optional arch=any libcassie-dev deb libdevel optional arch=any libcassie-doc deb doc optional arch=all libcassie1v5 deb libs optional arch=any Checksums-Sha1: a25a0e8173ad9c5f91427f8235414ee9063d343a 60576 cassiopee_1.0.9.orig.tar.gz 788742371d6720dbb55744190dfac609174969b1 5064 cassiopee_1.0.9-4.debian.tar.xz Checksums-Sha256: f02d72bbc18e858af68fb0a25d2e5d00b52d3ab5ef33d2e6731d8ff3d8bce35a 60576 cassiopee_1.0.9.orig.tar.gz f91556d7d610caa52f2c79703a528e40f47169f086849fd971859eef67c05460 5064 cassiopee_1.0.9-4.debian.tar.xz Files: 4fc0d2239a849e8075e2941210455bec 60576 cassiopee_1.0.9.orig.tar.gz c426bd10014f9753db9be7211feb916c 5064 cassiopee_1.0.9-4.debian.tar.xz Dgit: 2a53a1a0bd35877cf5f23429fe18c5e34db10036 debian archive/debian/1.0.9-4 https://git.dgit.debian.org/cassiopee -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmWALicUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoE2w/+Pd3wWjPJ5RpGgk2K2xlqmQhbCZA6 r4W5iRwKZR0dMO8emtrdEdvnwgZiTjIYUt33WlTY1l/jw2qWKdPTDTcy0s4A2qug xy1nfvtOz6dN4eeO8PulhCbxLFNBXceMNFj/ozFhS9mFg+UixxbEIuaZ1iuWoWH2 0bRqT/FdmbNevQiKrttpKR1yqD4D3SnrktsQzdN01jfbGWAFRK8jbo2ZSW1jY5PQ CwZY0bofxtgPnyALd/hyZY6EGbf5hZ6/wvtyGuNWzmdwrkR0heO+uoQW/L0NQ2iB qGsUyOfX3bGPTldWX7jjlY3oXUF7d1HLAieJT/h5Xpyj+q8zBgJg6pKT1QR/8CDD 1oy4b0CvGnepzemHAkUW2OQtUZd+gVMi9/HmCxOdOG1B7QH7cb4ZCwvk3G3mID75 JfV5oHmY34egmeciKuMAKZyaVFQIRzuDOpMKMLxVGBwqbXhS61j9CpAJSVqcke4V gnaNTFBJH8vdkQJ8FFEfjcN2XlC/hfp5kArqrcJJGHp4qo9oly60YG9jrZlO84Zy LXbUlBlFTnEvl2wyMv1H1b7wBZenIkrRpa+vxU2nOa3/qeSiP1U3bBOFfmWhYYyC e5wVxpgVu6YumOMVPi9Dvw74L7QHNBkEBh4i8iq7fmUJiEQkbEiFEXT9a8tllsLc IgPToZlCKYFerds= =nntK -----END PGP SIGNATURE----- Fri Feb 14 04:44:34 UTC 2025 I: Checking whether the package is not for us Fri Feb 14 04:44:35 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Fri Feb 14 04:44:35 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Fri Feb 14 04:45:20 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Feb 13 16:44:37 -12 2025 I: pbuilder-time-stamp: 1739508277 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cassiopee_1.0.9-4.dsc] I: copying [./cassiopee_1.0.9.orig.tar.gz] I: copying [./cassiopee_1.0.9-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./cassiopee_1.0.9-4.dsc: unsupported subcommand dpkg-source: info: extracting cassiopee in cassiopee-1.0.9 dpkg-source: info: unpacking cassiopee_1.0.9.orig.tar.gz dpkg-source: info: unpacking cassiopee_1.0.9-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2520238/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='efa0a45564d145ccbf5f35e9b47c4252' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2520238' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/pbuilderrc_ZFoj --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/b1 --logfile b1/build.log cassiopee_1.0.9-4.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2520238/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19922 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libgoogle-glog-dev; however: Package libgoogle-glog-dev is not installed. pbuilder-satisfydepends-dummy depends on libcppunit-dev; however: Package libcppunit-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libcppunit-1.15-0{a} libcppunit-dev{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libgflags-dev{a} libgflags2.2{a} libgnutls30t64{a} libgoogle-glog-dev{a} libgoogle-glog0v6t64{a} libgssapi-krb5-2{a} libicu-dev{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 116 MB of archives. After unpacking 654 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-7 [62.4 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-7 [868 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.4-3 [92.0 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-5 [284 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-3 [862 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-1 [770 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 cmake-data all 3.31.5-2 [2267 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-6 [9239 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.21.3-4 [32.2 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.2-1 [23.9 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.21.3-4 [81.5 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 27 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.21.3-4 [308 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-4 [127 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libidn2-0 arm64 2.3.7-2+b1 [127 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8+b1 [20.3 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8+b1 [55.7 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 libldap2 arm64 2.6.9+dfsg-1 [179 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 libffi8 arm64 3.4.6-1 [20.9 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libtasn1-6 arm64 4.19.0-3+b3 [46.9 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.12.0+git20250209.89ed161+ds-1 [326 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libuv1t64 arm64 1.50.0-2 [148 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 cmake arm64 3.31.5-2 [9907 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-3 [539 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 54 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.1 [920 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libllvm19 arm64 1:19.1.7-1+b1 [23.3 MB] Get: 63 http://deb.debian.org/debian trixie/main arm64 libclang-cpp19 arm64 1:19.1.7-1+b1 [12.0 MB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libclang1-19 arm64 1:19.1.7-1+b1 [6851 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libfmt10 arm64 10.1.1+ds1-4 [121 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 doxygen arm64 1.9.8+ds-2.1 [4519 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 icu-devtools arm64 72.1-6 [196 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 libboost1.83-dev arm64 1.83.0-4 [10.6 MB] Get: 69 http://deb.debian.org/debian trixie/main arm64 libboost-regex1.83.0 arm64 1.83.0-4 [314 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 libicu-dev arm64 72.1-6 [10.3 MB] Get: 71 http://deb.debian.org/debian trixie/main arm64 libboost-regex1.83-dev arm64 1.83.0-4 [338 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 libboost-iostreams1.83-dev arm64 1.83.0-4 [261 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 libboost-iostreams-dev arm64 1.83.0.2+b2 [3568 B] Get: 74 http://deb.debian.org/debian trixie/main arm64 libboost-serialization1.83.0 arm64 1.83.0-4 [325 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 libboost-serialization1.83-dev arm64 1.83.0-4 [375 kB] Get: 76 http://deb.debian.org/debian trixie/main arm64 libboost-serialization-dev arm64 1.83.0.2+b2 [3816 B] Get: 77 http://deb.debian.org/debian trixie/main arm64 libcppunit-1.15-0 arm64 1.15.1-4+b2 [141 kB] Get: 78 http://deb.debian.org/debian trixie/main arm64 libcppunit-dev arm64 1.15.1-4+b2 [202 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 libgflags2.2 arm64 2.2.2-2+b1 [72.4 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 libgflags-dev arm64 2.2.2-2+b1 [93.7 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 libgoogle-glog0v6t64 arm64 0.6.0-2.1+b1 [59.7 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 libgoogle-glog-dev arm64 0.6.0-2.1+b1 [97.3 kB] Fetched 116 MB in 0s (247 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19922 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-7_arm64.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cassiopee-1.0.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cassiopee_1.0.9-4_source.changes dpkg-buildpackage: info: source package cassiopee dpkg-buildpackage: info: source version 1.0.9-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at CMakeLists.txt:3 (enable_language): project() should be called prior to this enable_language() call. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:29 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") found components: iostreams serialization -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Configuring done (2.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu dh_auto_build cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/depend make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/CMakeFiles/doc.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src/CMakeFiles/cassie.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/build make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 11%] Generating API documentation with Doxygen [ 22%] Building CXX object src/CMakeFiles/cassie.dir/cassiopee.cxx.o cd /build/reproducible-path/cassiopee-1.0.9 && /usr/bin/doxygen /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -Dcassie_EXPORTS -I/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT src/CMakeFiles/cassie.dir/cassiopee.cxx.o -MF CMakeFiles/cassie.dir/cassiopee.cxx.o.d -o CMakeFiles/cassie.dir/cassiopee.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx warning: Tag 'TCL_SUBST' at line 203 of file '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile' has become obsolete. 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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1587 of file '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 1617 of file '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1622 of file '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1762 of file '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:324: warning: Compound per_position is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:223: warning: Member seq_length (variable) of class CassieIndexer is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:353: warning: Member morphisms (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:424: warning: Member pattern_length (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: argument 'array' of command @param is not found in the argument list of CassieSearch::search(string suffixes[]) /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: The following parameter of CassieSearch::search(string suffixes[]) is not documented: parameter 'suffixes' /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:49: warning: Member pos (variable) of class Match is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:326: warning: Member operator()(const Match *struct1, const Match *struct2) (function) of struct per_position is not documented. Doxygen version used: 1.9.8 Notice: Output directory 'doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/cassiopee-1.0.9/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file src/Cassiopee.h... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound Ambiguous... Generating docs for compound CassieIndexer... Generating docs for compound CassieSearch... Generating docs for compound CassiopeeUtils... Generating docs for compound Match... Generating docs for compound per_position... Generating docs for compound TreeNode... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 145/65536 hits=236 misses=150 symbol lookup cache used 125/65536 hits=429 misses=125 finished... make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 22%] Built target doc [ 33%] Linking CXX shared library ../lib/libcassie.so cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassie.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,--dependency-file=CMakeFiles/cassie.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libcassie.so.1 -o ../lib/libcassie.so.1.0.0 CMakeFiles/cassie.dir/cassiopee.cxx.o -L/usr/local/lib -Wl,-rpath,/usr/local/lib: -lglog /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/aarch64-linux-gnu/libboost_serialization.so.1.83.0 cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libcassie.so.1.0.0 ../lib/libcassie.so.1 ../lib/libcassie.so make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 33%] Built target cassie make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/depend make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/depend make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu 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/build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src/CMakeFiles/cassiopeeknife.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/build make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 44%] Building CXX object src/CMakeFiles/cassiopee.dir/cassie.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopee.dir/cassie.cxx.o -MF CMakeFiles/cassiopee.dir/cassie.cxx.o.d -o CMakeFiles/cassiopee.dir/cassie.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx [ 55%] Building CXX object src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o [ 66%] Building CXX object test/CMakeFiles/test_cassiopee.dir/test.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o -MF CMakeFiles/cassiopeeknife.dir/knife.cxx.o.d -o CMakeFiles/cassiopeeknife.dir/knife.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin -I/build/reproducible-path/cassiopee-1.0.9/test/src -I/build/reproducible-path/cassiopee-1.0.9/src -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT test/CMakeFiles/test_cassiopee.dir/test.cxx.o -MF CMakeFiles/test_cassiopee.dir/test.cxx.o.d -o CMakeFiles/test_cassiopee.dir/test.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/test/test.cxx [ 77%] Linking CXX executable ../bin/cassiopeeknife cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopeeknife.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/cassiopeeknife.dir/link.d CMakeFiles/cassiopeeknife.dir/knife.cxx.o -o ../bin/cassiopeeknife -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/aarch64-linux-gnu/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 77%] Built target cassiopeeknife [ 88%] Linking CXX executable ../bin/cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/cassiopee.dir/link.d CMakeFiles/cassiopee.dir/cassie.cxx.o -o ../bin/cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/aarch64-linux-gnu/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [ 88%] Built target cassiopee [100%] Linking CXX executable ../bin/test_cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/test_cassiopee.dir/link.d CMakeFiles/test_cassiopee.dir/test.cxx.o -o ../bin/test_cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/lib ../lib/libcassie.so.1.0.0 -lglog -lcppunit /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/aarch64-linux-gnu/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' [100%] Built target test_cassiopee make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' dh_auto_test cd obj-aarch64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j12 UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: TestCassie 1: Test command: /build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu/bin/test_cassiopee 1: Working Directory: /build/reproducible-path/cassiopee-1.0.9 1: Test timeout computed to be: 10000000 1: WARNING: Logging before InitGoogleLogging() is written to STDERR 1: I20250214 04:45:11.760052 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.760138 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.761278 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.761296 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.761433 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.761444 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.761736 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.761749 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.761904 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.761914 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.762908 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.762923 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.763876 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.763887 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.764154 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.764165 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.764432 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.764442 2531673 cassiopee.cxx:651] Indexing test/protein.txt 1: I20250214 04:45:11.764493 2531673 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250214 04:45:11.764503 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.766222 2531673 cassiopee.cxx:693] Maximum index depth: 75 1: I20250214 04:45:11.770360 2531673 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250214 04:45:11.770392 2531673 cassiopee.cxx:638] Index file exists, loading it 1: I20250214 04:45:11.774952 2531673 cassiopee.cxx:743] Loaded 2504 nodes 1: I20250214 04:45:11.775607 2531673 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250214 04:45:11.775638 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250214 04:45:11.777096 2531673 cassiopee.cxx:693] Maximum index depth: 75 1: I20250214 04:45:11.781087 2531673 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250214 04:45:11.781121 2531673 cassiopee.cxx:638] Index file exists, loading it 1: I20250214 04:45:11.785907 2531673 cassiopee.cxx:743] Loaded 2504 nodes 1: I20250214 04:45:11.786389 2531673 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250214 04:45:11.786419 2531673 cassiopee.cxx:651] Indexing test/sequence.txt 1: OK (13) 1/1 Test #1: TestCassie ....................... Passed 0.03 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.04 sec make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/cassiopee-1.0.9/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/CassiopeeConfig.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0 -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/Cassiopee.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree.hh -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree_util.hh make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-aarch64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9' rm -f doc/html/jquery.js dh_install make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libcassie-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'cassiopee' in '../cassiopee_1.0.9-4_arm64.deb'. dpkg-deb: building package 'cassiopee-dbgsym' in '../cassiopee-dbgsym_1.0.9-4_arm64.deb'. dpkg-deb: building package 'libcassie-doc' in '../libcassie-doc_1.0.9-4_all.deb'. dpkg-deb: building package 'libcassie1v5' in '../libcassie1v5_1.0.9-4_arm64.deb'. dpkg-deb: building package 'libcassie1v5-dbgsym' in '../libcassie1v5-dbgsym_1.0.9-4_arm64.deb'. dpkg-deb: building package 'libcassie-dev' in '../libcassie-dev_1.0.9-4_arm64.deb'. dpkg-genbuildinfo --build=binary -O../cassiopee_1.0.9-4_arm64.buildinfo dpkg-genchanges --build=binary -O../cassiopee_1.0.9-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2520238 and its subdirectories I: Current time: Thu Feb 13 16:45:18 -12 2025 I: pbuilder-time-stamp: 1739508318 Fri Feb 14 04:45:20 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Fri Feb 14 04:45:20 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Fri Feb 14 04:46:40 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Fri Feb 14 04:46:41 UTC 2025 I: cassiopee_1.0.9-4_arm64.changes: Format: 1.8 Date: Mon, 18 Dec 2023 12:23:03 +0100 Source: cassiopee Binary: cassiopee cassiopee-dbgsym libcassie-dev libcassie-doc libcassie1v5 libcassie1v5-dbgsym Architecture: arm64 all Version: 1.0.9-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1v5 - library implementating search algorithms Closes: 1043792 Changes: cassiopee (1.0.9-4) unstable; urgency=medium . * Team upload. * d/control: declare compliance to standards version 4.6.2. * d/control: mark libcassie-doc Multi-Arch foreign. * d/clean: new: cleanup doc and test artifacts. (Closes: #1043792) * d/rules: remove clean override: deferred to d/clean. Checksums-Sha1: 1949aba3ea84b2df28276c27d5c0c37698de8f19 138052 cassiopee-dbgsym_1.0.9-4_arm64.deb c77b58ddde4013f10b04d1fcbbba66ce093bd9c4 7861 cassiopee_1.0.9-4_arm64.buildinfo c8858102858904ecc02ba4ba75f726cc2457aa77 16728 cassiopee_1.0.9-4_arm64.deb 49a9e2266d6de905aca1b06fb400842885ea2095 18784 libcassie-dev_1.0.9-4_arm64.deb 8f7597b06c9990522fa140e4f0b602f16a658def 51884 libcassie-doc_1.0.9-4_all.deb 77caf26a171b6ca71d3b6abdd61908f698cfa2db 342408 libcassie1v5-dbgsym_1.0.9-4_arm64.deb fad1ae6282b88b6fe9d851befa62b4f5cf41fde4 38236 libcassie1v5_1.0.9-4_arm64.deb Checksums-Sha256: 90b6081ba5edbeaf97069e8157a61e523823268ea4c9c16b743c79e097cbf9d0 138052 cassiopee-dbgsym_1.0.9-4_arm64.deb e3c4e23a87f5c74f3fbf6c321427c1f32e24cbf9242d8aa251c55908b5a98bbc 7861 cassiopee_1.0.9-4_arm64.buildinfo 5c1a432ec4dc18617b4e54b326be4300dc5495455b64e7562ced5fa80a1bbd0a 16728 cassiopee_1.0.9-4_arm64.deb a568a14989a40d6bba2dfed51eb8a9873585bd24da2df29a12c33126cfb96c89 18784 libcassie-dev_1.0.9-4_arm64.deb e8adaaab3d3accd53e8c8cc05a5407e58358830dedd931b0aafd5b606f8d7de0 51884 libcassie-doc_1.0.9-4_all.deb 3cf680e56448522305eb422f0421b1e68356907534e521e48befaf7363f68cf7 342408 libcassie1v5-dbgsym_1.0.9-4_arm64.deb 25baca58e85aaab0c5e413aba3534ecfd3aba920e5f9bfc03e446714e8e406fd 38236 libcassie1v5_1.0.9-4_arm64.deb Files: 069100c11448e75a99a715b059c3600a 138052 debug optional cassiopee-dbgsym_1.0.9-4_arm64.deb dc8fea1fb54ac550a92ea1296184bfda 7861 science optional cassiopee_1.0.9-4_arm64.buildinfo ecbe915d3dc6941f56bb61560af707fe 16728 science optional cassiopee_1.0.9-4_arm64.deb d6f55fccce157012999e11a192979135 18784 libdevel optional libcassie-dev_1.0.9-4_arm64.deb 6729ab2ed076225c46fa9337736f1cdd 51884 doc optional libcassie-doc_1.0.9-4_all.deb 85010e5f1c157ef512ae399584c52d0d 342408 debug optional libcassie1v5-dbgsym_1.0.9-4_arm64.deb 1539e4b6850dcb185669386df0a67259 38236 libs optional libcassie1v5_1.0.9-4_arm64.deb Fri Feb 14 04:46:42 UTC 2025 I: diffoscope 288 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_10-57201.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/cassiopee_1.0.9-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/cassiopee_1.0.9-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/cassiopee_1.0.9-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/b1/cassiopee_1.0.9-4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.PZR8QCyD/b2/cassiopee_1.0.9-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 222ms CPU time consumed: 224ms Fri Feb 14 04:46:42 UTC 2025 I: diffoscope 288 found no differences in the changes files, and a .buildinfo file also exists. Fri Feb 14 04:46:42 UTC 2025 I: cassiopee from trixie built successfully and reproducibly on arm64. Fri Feb 14 04:46:43 UTC 2025 I: Submitting .buildinfo files to external archives: Fri Feb 14 04:46:43 UTC 2025 I: Submitting 12K b1/cassiopee_1.0.9-4_arm64.buildinfo.asc Fri Feb 14 04:46:44 UTC 2025 I: Submitting 12K b2/cassiopee_1.0.9-4_arm64.buildinfo.asc Fri Feb 14 04:46:45 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Feb 14 04:46:45 UTC 2025 I: Done submitting .buildinfo files. Fri Feb 14 04:46:45 UTC 2025 I: Removing signed cassiopee_1.0.9-4_arm64.buildinfo.asc files: removed './b1/cassiopee_1.0.9-4_arm64.buildinfo.asc' removed './b2/cassiopee_1.0.9-4_arm64.buildinfo.asc'