Fri Feb 14 05:41:22 UTC 2025 I: starting to build pullseq/trixie/arm64 on jenkins on '2025-02-14 05:41' Fri Feb 14 05:41:22 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/60129/console.log Fri Feb 14 05:41:22 UTC 2025 I: Downloading source for trixie/pullseq=1.0.2-5 --2025-02-14 05:41:22-- http://deb.debian.org/debian/pool/main/p/pullseq/pullseq_1.0.2-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1348 (1.3K) [text/prs.lines.tag] Saving to: ‘pullseq_1.0.2-5.dsc’ 0K . 100% 189M=0s 2025-02-14 05:41:22 (189 MB/s) - ‘pullseq_1.0.2-5.dsc’ saved [1348/1348] Fri Feb 14 05:41:22 UTC 2025 I: pullseq_1.0.2-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pullseq Binary: pullseq Architecture: any Version: 1.0.2-5 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/bcthomas/pullseq Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/pullseq Vcs-Git: https://salsa.debian.org/med-team/pullseq.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev Package-List: pullseq deb science optional arch=any Checksums-Sha1: fcfc4b994c29cb5b504c8e7503eba12d569d454e 1408480 pullseq_1.0.2.orig.tar.gz 8b9ef948f1b3e124eba973e83104c1d194beece7 8904 pullseq_1.0.2-5.debian.tar.xz Checksums-Sha256: a295d7e0e2d64ed05d293d795d1716376707e465f2c42ede6454f27db586c85f 1408480 pullseq_1.0.2.orig.tar.gz dafe4c70393b358df0c2ce5eb0f79eda52344ca860a5ca6f8dcf8570e11deaca 8904 pullseq_1.0.2-5.debian.tar.xz Files: a4ef6e5b4b5c77be2ef5d444c44fb6c0 1408480 pullseq_1.0.2.orig.tar.gz a3c2152af3d00472ac5042ee0e5368eb 8904 pullseq_1.0.2-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCZfNqCAAKCRAqJ5BL1yQ+ 2uDUAP9p6beVcqjYofyUgsCmVPr6U/yqhV9lvusLRGcCOYBfVQD9FrC468ldqD/B iQJlLfPdrc2K87/jY3zUcB9f5joSLQU= =Xvzr -----END PGP SIGNATURE----- Fri Feb 14 05:41:22 UTC 2025 I: Checking whether the package is not for us Fri Feb 14 05:41:22 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Fri Feb 14 05:41:22 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Fri Feb 14 05:41:58 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Feb 13 17:41:24 -12 2025 I: pbuilder-time-stamp: 1739511684 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pullseq_1.0.2-5.dsc] I: copying [./pullseq_1.0.2.orig.tar.gz] I: copying [./pullseq_1.0.2-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pullseq_1.0.2-5.dsc: unsupported subcommand dpkg-source: info: extracting pullseq in pullseq-1.0.2 dpkg-source: info: unpacking pullseq_1.0.2.orig.tar.gz dpkg-source: info: unpacking pullseq_1.0.2-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pcre2.patch dpkg-source: info: applying getc.patch dpkg-source: info: applying fixup-implicit-function-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3246721/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='c7b218a5f59849bdb9be95083cdc9362' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3246721' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/pbuilderrc_VNJO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/b1 --logfile b1/build.log pullseq_1.0.2-5.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3246721/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19922 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libpcre2-dev; however: Package libpcre2-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 22.2 MB of archives. After unpacking 85.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.4-3 [92.0 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-5 [284 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-6 [9239 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libpcre2-16-0 arm64 10.44-5 [230 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libpcre2-32-0 arm64 10.44-5 [220 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 libpcre2-posix3 arm64 10.44-5 [60.5 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libpcre2-dev arm64 10.44-5 [704 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 22.2 MB in 0s (153 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19922 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_arm64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-3_arm64.deb ... Unpacking bsdextrautils (2.40.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_arm64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../23-libunistring5_1.3-1_arm64.deb ... Unpacking libunistring5:arm64 (1.3-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-6_arm64.deb ... Unpacking libicu72:arm64 (72.1-6) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_arm64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libpcre2-16-0:arm64. Preparing to unpack .../30-libpcre2-16-0_10.44-5_arm64.deb ... Unpacking libpcre2-16-0:arm64 (10.44-5) ... Selecting previously unselected package libpcre2-32-0:arm64. Preparing to unpack .../31-libpcre2-32-0_10.44-5_arm64.deb ... Unpacking libpcre2-32-0:arm64 (10.44-5) ... Selecting previously unselected package libpcre2-posix3:arm64. Preparing to unpack .../32-libpcre2-posix3_10.44-5_arm64.deb ... Unpacking libpcre2-posix3:arm64 (10.44-5) ... Selecting previously unselected package libpcre2-dev:arm64. Preparing to unpack .../33-libpcre2-dev_10.44-5_arm64.deb ... Unpacking libpcre2-dev:arm64 (10.44-5) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../34-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-6) ... Setting up bsdextrautils (2.40.4-3) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libpcre2-16-0:arm64 (10.44-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:arm64 (10.44-5) ... Setting up libunistring5:arm64 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpcre2-posix3:arm64 (10.44-5) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libpcre2-dev:arm64 (10.44-5) ... Setting up libtool (2.5.4-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.40-6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pullseq-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pullseq_1.0.2-5_source.changes dpkg-buildpackage: info: source package pullseq dpkg-buildpackage: info: source version 1.0.2-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:12: installing './compile' configure.ac:48: installing './config.guess' configure.ac:48: installing './config.sub' configure.ac:7: installing './install-sh' configure.ac:7: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for gzopen in -lz... yes checking for pcre2_config_8 in -lpcre2-8... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for pcre2.h... no checking for inttypes.h... (cached) yes checking for limits.h... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inline... inline checking for size_t... yes checking for ssize_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for ptrdiff_t... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for strlen... yes checking for memset... yes checking for strchr... yes checking for strerror... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making all in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make all-am make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o hash.o hash.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o output.o output.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o size_filter.o size_filter.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o search_header.o search_header.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o file_read.o file_read.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_re.o pull_by_re.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_name.o pull_by_name.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_size.o pull_by_size.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pullseq.o pullseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o cmpseq.o cmpseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o seqdiff.o seqdiff.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o seqdiff_results.o seqdiff_results.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o pullseq hash.o output.o size_filter.o search_header.o file_read.o pull_by_re.o pull_by_name.o pull_by_size.o pullseq.o -lpcre2-8 -lz gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o seqdiff cmpseq.o file_read.o hash.o seqdiff.o seqdiff_results.o output.o -lpcre2-8 -lz make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_auto_test make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making check in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/pullseq/ make -j12 install DESTDIR=/build/reproducible-path/pullseq-1.0.2/debian/pullseq AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making install in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[3]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' /usr/bin/install -c pullseq seqdiff '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'pullseq' in '../pullseq_1.0.2-5_arm64.deb'. dpkg-deb: building package 'pullseq-dbgsym' in '../pullseq-dbgsym_1.0.2-5_arm64.deb'. dpkg-genbuildinfo --build=binary -O../pullseq_1.0.2-5_arm64.buildinfo dpkg-genchanges --build=binary -O../pullseq_1.0.2-5_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3246721 and its subdirectories I: Current time: Thu Feb 13 17:41:57 -12 2025 I: pbuilder-time-stamp: 1739511717 Fri Feb 14 05:41:59 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Fri Feb 14 05:41:59 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Fri Feb 14 05:43:02 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Fri Feb 14 05:43:03 UTC 2025 I: pullseq_1.0.2-5_arm64.changes: Format: 1.8 Date: Fri, 15 Mar 2024 02:45:24 +0530 Source: pullseq Binary: pullseq pullseq-dbgsym Architecture: arm64 Version: 1.0.2-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: pullseq - Extract sequence from a fasta or fastq Closes: 1066472 Changes: pullseq (1.0.2-5) unstable; urgency=medium . * Fixup implicit declaration of function (Closes: #1066472) Checksums-Sha1: 3cac1e3bb3037853c38bb4773483187a912b5a68 53300 pullseq-dbgsym_1.0.2-5_arm64.deb 92a8614c759ad77fd86e47cff31653288986ed36 4993 pullseq_1.0.2-5_arm64.buildinfo 24e21ab567c83409a1c02af7239ee318fcd552bb 20608 pullseq_1.0.2-5_arm64.deb Checksums-Sha256: fd19435e48d177f74f18750d66b1b31242d578d097d9ce48511843ef0e7b591c 53300 pullseq-dbgsym_1.0.2-5_arm64.deb 0822059180c111d50cac9517d7b5984fafd6d6d3abb2e868302f21196a11bf2c 4993 pullseq_1.0.2-5_arm64.buildinfo d77b285163ccb2a269aa2e8b2f7ba694fc9d12ee7a1ff7e7f0d960fd56d61696 20608 pullseq_1.0.2-5_arm64.deb Files: fb30bf363fc94c93a1ab15ac1dedba99 53300 debug optional pullseq-dbgsym_1.0.2-5_arm64.deb 862d6c6b144c8c159cdf271b31677665 4993 science optional pullseq_1.0.2-5_arm64.buildinfo 100426b7e9e39dcb23241879bd6787fa 20608 science optional pullseq_1.0.2-5_arm64.deb Fri Feb 14 05:43:03 UTC 2025 I: diffoscope 288 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_9-60129.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/pullseq_1.0.2-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/pullseq_1.0.2-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/pullseq_1.0.2-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/b1/pullseq_1.0.2-5_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.7IuYQaSQ/b2/pullseq_1.0.2-5_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 220ms CPU time consumed: 222ms Fri Feb 14 05:43:04 UTC 2025 I: diffoscope 288 found no differences in the changes files, and a .buildinfo file also exists. Fri Feb 14 05:43:04 UTC 2025 I: pullseq from trixie built successfully and reproducibly on arm64. Fri Feb 14 05:43:05 UTC 2025 I: Submitting .buildinfo files to external archives: Fri Feb 14 05:43:05 UTC 2025 I: Submitting 8.0K b1/pullseq_1.0.2-5_arm64.buildinfo.asc Fri Feb 14 05:43:06 UTC 2025 I: Submitting 8.0K b2/pullseq_1.0.2-5_arm64.buildinfo.asc Fri Feb 14 05:43:06 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Feb 14 05:43:06 UTC 2025 I: Done submitting .buildinfo files. Fri Feb 14 05:43:06 UTC 2025 I: Removing signed pullseq_1.0.2-5_arm64.buildinfo.asc files: removed './b1/pullseq_1.0.2-5_arm64.buildinfo.asc' removed './b2/pullseq_1.0.2-5_arm64.buildinfo.asc'