Sun Mar 9 13:01:10 UTC 2025 I: starting to build pyranges/trixie/arm64 on jenkins on '2025-03-09 13:01' Sun Mar 9 13:01:10 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_10/60708/console.log Sun Mar 9 13:01:10 UTC 2025 I: Downloading source for trixie/pyranges=0.0.111+ds-8 --2025-03-09 13:01:10-- http://deb.debian.org/debian/pool/main/p/pyranges/pyranges_0.0.111%2bds-8.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2428 (2.4K) [text/prs.lines.tag] Saving to: ‘pyranges_0.0.111+ds-8.dsc’ 0K .. 100% 308M=0s 2025-03-09 13:01:10 (308 MB/s) - ‘pyranges_0.0.111+ds-8.dsc’ saved [2428/2428] Sun Mar 9 13:01:10 UTC 2025 I: pyranges_0.0.111+ds-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pyranges Binary: python3-pyranges Architecture: all Version: 0.0.111+ds-8 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Étienne Mollier Homepage: https://github.com/biocore-ntnu/pyranges Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/pyranges Vcs-Git: https://salsa.debian.org/med-team/pyranges.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-setuptools, python3-all, python3-ncls , python3-pyrle , python3-pytest , python3-pytest-xdist , python3-sorted-nearest, python3-hypothesis, bedtools, samtools Package-List: python3-pyranges deb python optional arch=all Checksums-Sha1: 3591cd303505955df6c34eec755d51f27bd38e5b 3288424 pyranges_0.0.111+ds.orig.tar.xz 11c16ff4e96765e90b03b8970baf6a2a67a79508 83524 pyranges_0.0.111+ds-8.debian.tar.xz Checksums-Sha256: b22a50cb9e0109c8c14720385a5e87bef029f491d4f3e02dbe492866802144d1 3288424 pyranges_0.0.111+ds.orig.tar.xz 32f2fd274b0a1491c14271918ced0d65f4f54803de208b204d1b7e3d72c1e2da 83524 pyranges_0.0.111+ds-8.debian.tar.xz Files: 2c48870491f89e171b4aeeaa5b3b216a 3288424 pyranges_0.0.111+ds.orig.tar.xz af00bef0cfbf5e3b80414fb319855373 83524 pyranges_0.0.111+ds-8.debian.tar.xz Dgit: 695bcedb7bdf86c3affa56de602d2bfb26c335dd debian archive/debian/0.0.111+ds-8 https://git.dgit.debian.org/pyranges -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmbus6QUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdq8Ow//Wvl+goyl2sk6S9YQ4rupm9O9dr5x gH4amgn/SZvJJyeS/FDigQO8Gk7H4eOAVqUDixAW345RzTg8A24FUp1RfYl0jGK7 yYxvyOqbwspMqMPRfshEYTdE4e8EeRgcT8hBgxx1S4XJKHKmIccalG/car77mqA9 1wGYoJu+3/33hDJr03Pj4YvINMldqYrEpImE5xXajpNY7tyAEqkJ5s2BQzN5X9MH oipETIoa2BqMMcSSIVzHaxM4KskGuDAT0t7VG/J2lZtTAkszZUrCeKKfaEgKCWrm UxfxkGQTuua9v1VjsHsam1U2VOXYYDdpFo99GMyv9jw4Xzir6KxGHJhfyYjM4q/L 2Kg6Z4iQh2uL/w34ai+cuxkFvt8yRLMhWfWUcL9VC8HrLRurEH55eKUafQ/WrGth kKdKfLNKSoYsXos/b1jjv9jR7M57eKblXzHjYgTaZH5NQWxONJRmj5NQf47UvEYr TDhP193+vbWKz5WteTXgY3MhIf5qQNNfNJIP+LhG1jCb3N/Ktk0PlkRFcbFuLLdq +uusJ+9iW4w3FdsMxK52AIw78aAChS57N9xX1bBTp79oL4NfF7jUPF6swV4qax+j HlfsPHexQAGSEHGb8kym9PgywQ1Ak30ZrBjqjxjU8JDCgH7LFVBZs1OXQMj2lcsi h67qJRAM6vTfQJg= =i+Dk -----END PGP SIGNATURE----- Sun Mar 9 13:01:10 UTC 2025 I: Checking whether the package is not for us Sun Mar 9 13:01:10 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sun Mar 9 13:01:10 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sun Mar 9 13:38:35 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 9 01:01:13 -12 2025 I: pbuilder-time-stamp: 1741525273 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pyranges_0.0.111+ds-8.dsc] I: copying [./pyranges_0.0.111+ds.orig.tar.xz] I: copying [./pyranges_0.0.111+ds-8.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pyranges_0.0.111+ds-8.dsc: unsupported subcommand dpkg-source: info: extracting pyranges in pyranges-0.0.111+ds dpkg-source: info: unpacking pyranges_0.0.111+ds.orig.tar.xz dpkg-source: info: unpacking pyranges_0.0.111+ds-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_dtype.patch dpkg-source: info: applying reorder.patch dpkg-source: info: applying numpy_1.24.patch dpkg-source: info: applying healthcheck-all.patch dpkg-source: info: applying no_install_depends_cython.patch dpkg-source: info: applying pandas2.0.patch dpkg-source: info: applying fix-test_unary.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/169045/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='93a8953014ea43a8986a5c15536fdbb1' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='169045' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/pbuilderrc_eA6T --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/b1 --logfile b1/build.log pyranges_0.0.111+ds-8.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/169045/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-setuptools, python3-all, python3-ncls, python3-pyrle, python3-pytest, python3-pytest-xdist, python3-sorted-nearest, python3-hypothesis, bedtools, samtools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19914 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-ncls; however: Package python3-ncls is not installed. pbuilder-satisfydepends-dummy depends on python3-pyrle; however: Package python3-pyrle is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-sorted-nearest; however: Package python3-sorted-nearest is not installed. pbuilder-satisfydepends-dummy depends on python3-hypothesis; however: Package python3-hypothesis is not installed. pbuilder-satisfydepends-dummy depends on bedtools; however: Package bedtools is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bedtools{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-dateutil{a} python3-execnet{a} python3-hypothesis{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-natsort{a} python3-ncls{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyrle{a} python3-pytest{a} python3-pytest-xdist{a} python3-pytz{a} python3-setuptools{a} python3-sorted-nearest{a} python3-sortedcontainers{a} python3-tabulate{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} samtools{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-click python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pygments python3-scipy python3-tables wget 0 packages upgraded, 109 newly installed, 0 to remove and 0 not upgraded. Need to get 48.7 MB of archives. After unpacking 224 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libpython3.13-minimal arm64 3.13.2-1 [853 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 python3.13-minimal arm64 3.13.2-1 [1997 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.13.2-1 [27.1 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 media-types all 12.0.0 [28.9 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 tzdata all 2025a-2 [259 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libffi8 arm64 3.4.7-1 [21.2 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 libpython3.13-stdlib arm64 3.13.2-1 [1914 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 python3.13 arm64 3.13.2-1 [745 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.13.2-1 [10.0 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.13.2-1 [28.1 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 python3-numpy-dev arm64 1:2.2.3+ds-2+b1 [136 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libblas3 arm64 3.12.1-2 [104 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libgfortran5 arm64 14.2.0-17 [361 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 liblapack3 arm64 3.12.1-2 [1819 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 python3-numpy arm64 1:2.2.3+ds-2+b1 [3596 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.4-5 [92.0 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-7 [285 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-3 [862 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-1 [770 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 bedtools arm64 2.31.1+dfsg-2+b1 [601 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-3 [539 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 42 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-6 [9239 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b2 [630 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.1 [920 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 57 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 python3-pkg-resources all 75.8.0-1 [222 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 python3-setuptools all 75.8.0-1 [724 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 dh-python all 6.20250108 [113 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.2-1 [23.9 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libidn2-0 arm64 2.3.7-2+b1 [127 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.21.3-4 [32.2 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.21.3-4 [81.5 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 72 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.21.3-4 [308 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-4 [127 kB] Get: 74 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 76 http://deb.debian.org/debian trixie/main arm64 libldap2 arm64 2.6.9+dfsg-1 [179 kB] Get: 77 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 78 http://deb.debian.org/debian trixie/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 libngtcp2-16 arm64 1.11.0-1 [121 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 libngtcp2-crypto-gnutls8 arm64 1.11.0-1 [28.2 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 83 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 84 http://deb.debian.org/debian trixie/main arm64 libcurl3t64-gnutls arm64 8.12.1-3 [336 kB] Get: 85 http://deb.debian.org/debian trixie/main arm64 libdeflate0 arm64 1.23-1+b1 [42.5 kB] Get: 86 http://deb.debian.org/debian trixie/main arm64 libhtscodecs2 arm64 1.6.1-2 [74.7 kB] Get: 87 http://deb.debian.org/debian trixie/main arm64 libhts3t64 arm64 1.21+ds-1 [426 kB] Get: 88 http://deb.debian.org/debian trixie/main arm64 libncurses6 arm64 6.5+20250216-1 [96.1 kB] Get: 89 http://deb.debian.org/debian trixie/main arm64 python3-all arm64 3.13.2-1 [1048 B] Get: 90 http://deb.debian.org/debian trixie/main arm64 python3-attr all 25.1.0-1 [68.7 kB] Get: 91 http://deb.debian.org/debian trixie/main arm64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 92 http://deb.debian.org/debian trixie/main arm64 python3-execnet all 2.1.1-1 [40.2 kB] Get: 93 http://deb.debian.org/debian trixie/main arm64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get: 94 http://deb.debian.org/debian trixie/main arm64 python3-hypothesis all 6.127.4-1 [330 kB] Get: 95 http://deb.debian.org/debian trixie/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 96 http://deb.debian.org/debian trixie/main arm64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 97 http://deb.debian.org/debian trixie/main arm64 python3-ncls arm64 0.0.63-hotfix+ds-1+b8 [360 kB] Get: 98 http://deb.debian.org/debian trixie/main arm64 python3-packaging all 24.2-1 [55.3 kB] Get: 99 http://deb.debian.org/debian trixie/main arm64 python3-pytz all 2025.1-3 [150 kB] Get: 100 http://deb.debian.org/debian trixie/main arm64 python3-tz all 2025.1-3 [4004 B] Get: 101 http://deb.debian.org/debian trixie/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-8+b1 [3872 kB] Get: 102 http://deb.debian.org/debian trixie/main arm64 python3-pandas all 2.2.3+dfsg-8 [3097 kB] Get: 103 http://deb.debian.org/debian trixie/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 104 http://deb.debian.org/debian trixie/main arm64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 105 http://deb.debian.org/debian trixie/main arm64 python3-pyrle arm64 0.0.33-4.1+b4 [277 kB] Get: 106 http://deb.debian.org/debian trixie/main arm64 python3-pytest all 8.3.4-1 [250 kB] Get: 107 http://deb.debian.org/debian trixie/main arm64 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 108 http://deb.debian.org/debian trixie/main arm64 python3-sorted-nearest arm64 0.0.39+dfsg-3+b1 [336 kB] Get: 109 http://deb.debian.org/debian trixie/main arm64 samtools arm64 1.21-1 [637 kB] Fetched 48.7 MB in 0s (126 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19914 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.2-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.2-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-1_arm64.deb ... Unpacking python3.13 (3.13.2-1) ... 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Preparing to unpack .../66-libngtcp2-crypto-gnutls8_1.11.0-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.11.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../67-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../68-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../69-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:arm64. Preparing to unpack .../70-libcurl3t64-gnutls_8.12.1-3_arm64.deb ... Unpacking libcurl3t64-gnutls:arm64 (8.12.1-3) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../71-libdeflate0_1.23-1+b1_arm64.deb ... Unpacking libdeflate0:arm64 (1.23-1+b1) ... Selecting previously unselected package libhtscodecs2:arm64. Preparing to unpack .../72-libhtscodecs2_1.6.1-2_arm64.deb ... Unpacking libhtscodecs2:arm64 (1.6.1-2) ... Selecting previously unselected package libhts3t64:arm64. Preparing to unpack .../73-libhts3t64_1.21+ds-1_arm64.deb ... Unpacking libhts3t64:arm64 (1.21+ds-1) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../74-libncurses6_6.5+20250216-1_arm64.deb ... Unpacking libncurses6:arm64 (6.5+20250216-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../75-python3-all_3.13.2-1_arm64.deb ... Unpacking python3-all (3.13.2-1) ... Selecting previously unselected package python3-attr. Preparing to unpack .../76-python3-attr_25.1.0-1_all.deb ... Unpacking python3-attr (25.1.0-1) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../77-python3-dateutil_2.9.0-3_all.deb ... Unpacking python3-dateutil (2.9.0-3) ... Selecting previously unselected package python3-execnet. Preparing to unpack .../78-python3-execnet_2.1.1-1_all.deb ... Unpacking python3-execnet (2.1.1-1) ... Selecting previously unselected package python3-sortedcontainers. Preparing to unpack .../79-python3-sortedcontainers_2.4.0-2_all.deb ... Unpacking python3-sortedcontainers (2.4.0-2) ... Selecting previously unselected package python3-hypothesis. Preparing to unpack .../80-python3-hypothesis_6.127.4-1_all.deb ... Unpacking python3-hypothesis (6.127.4-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../81-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-natsort. Preparing to unpack .../82-python3-natsort_8.0.2-2_all.deb ... Unpacking python3-natsort (8.0.2-2) ... Selecting previously unselected package python3-ncls. Preparing to unpack .../83-python3-ncls_0.0.63-hotfix+ds-1+b8_arm64.deb ... Unpacking python3-ncls (0.0.63-hotfix+ds-1+b8) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../84-python3-packaging_24.2-1_all.deb ... Unpacking python3-packaging (24.2-1) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../85-python3-pytz_2025.1-3_all.deb ... Unpacking python3-pytz (2025.1-3) ... Selecting previously unselected package python3-tz. Preparing to unpack .../86-python3-tz_2025.1-3_all.deb ... Unpacking python3-tz (2025.1-3) ... Selecting previously unselected package python3-pandas-lib:arm64. Preparing to unpack .../87-python3-pandas-lib_2.2.3+dfsg-8+b1_arm64.deb ... Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-8+b1) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../88-python3-pandas_2.2.3+dfsg-8_all.deb ... Unpacking python3-pandas (2.2.3+dfsg-8) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../89-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-tabulate. Preparing to unpack .../90-python3-tabulate_0.9.0-1_all.deb ... Unpacking python3-tabulate (0.9.0-1) ... Selecting previously unselected package python3-pyrle. Preparing to unpack .../91-python3-pyrle_0.0.33-4.1+b4_arm64.deb ... Unpacking python3-pyrle (0.0.33-4.1+b4) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../92-python3-pytest_8.3.4-1_all.deb ... Unpacking python3-pytest (8.3.4-1) ... Selecting previously unselected package python3-pytest-xdist. Preparing to unpack .../93-python3-pytest-xdist_3.6.1-1_all.deb ... Unpacking python3-pytest-xdist (3.6.1-1) ... Selecting previously unselected package python3-sorted-nearest. Preparing to unpack .../94-python3-sorted-nearest_0.0.39+dfsg-3+b1_arm64.deb ... Unpacking python3-sorted-nearest (0.0.39+dfsg-3+b1) ... Selecting previously unselected package samtools. Preparing to unpack .../95-samtools_1.21-1_arm64.deb ... Unpacking samtools (1.21-1) ... Setting up libhtscodecs2:arm64 (1.6.1-2) ... Setting up media-types (12.0.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libicu72:arm64 (72.1-6) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up libdeflate0:arm64 (1.23-1+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libcom-err2:arm64 (1.47.2-1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-4) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-9) ... Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Mar 9 13:01:37 UTC 2025. Universal Time is now: Sun Mar 9 13:01:37 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libblas3:arm64 (3.12.1-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libncurses6:arm64 (6.5+20250216-1) ... Setting up libunistring5:arm64 (1.3-1) ... Setting up python3-numpy-dev:arm64 (1:2.2.3+ds-2+b1) ... Setting up autopoint (0.23.1-1) ... Setting up libk5crypto3:arm64 (1.21.3-4) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:arm64 (14.2.0-17) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:arm64 (1.8.0-1) ... Setting up libffi8:arm64 (3.4.7-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:arm64 (1.11.0-1) ... Setting up libkrb5-3:arm64 (1.21.3-4) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Setting up bedtools (2.31.1+dfsg-2+b1) ... Setting up libldap2:arm64 (2.6.9+dfsg-1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:arm64 (3.12.1-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-3) ... Setting up libidn2-0:arm64 (2.3.7-2+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-4) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libpython3.13-stdlib:arm64 (3.13.2-1) ... Setting up libpython3-stdlib:arm64 (3.13.2-1) ... Setting up libgnutls30t64:arm64 (3.8.9-2) ... Setting up python3.13 (3.13.2-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.2-1) ... Setting up python3-sortedcontainers (2.4.0-2) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-natsort (8.0.2-2) ... Setting up python3-packaging (24.2-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-numpy (1:2.2.3+ds-2+b1) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-ncls (0.0.63-hotfix+ds-1+b8) ... Setting up python3-execnet (2.1.1-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.11.0-1) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-attr (25.1.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-pytest (8.3.4-1) ... Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-8+b1) ... Setting up python3-hypothesis (6.127.4-1) ... Setting up python3-typeguard (4.4.2-1) ... Setting up libcurl3t64-gnutls:arm64 (8.12.1-3) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-all (3.13.2-1) ... Setting up debhelper (13.24.1) ... Setting up python3-pytz (2025.1-3) ... Setting up python3-tz (2025.1-3) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pandas (2.2.3+dfsg-8) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up libhts3t64:arm64 (1.21+ds-1) ... Setting up python3-pkg-resources (75.8.0-1) ... Setting up python3-pyrle (0.0.33-4.1+b4) ... Setting up python3-setuptools (75.8.0-1) ... Setting up python3-pytest-xdist (3.6.1-1) ... Setting up python3-sorted-nearest (0.0.39+dfsg-3+b1) ... Setting up samtools (1.21-1) ... Setting up dh-python (6.20250108) ... Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pyranges-0.0.111+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pyranges_0.0.111+ds-8_source.changes dpkg-buildpackage: info: source package pyranges dpkg-buildpackage: info: source version 0.0.111+ds-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from pyranges-0.0.111+ds/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/pyranges-0.0.111+ds' echo 'Generating corresponding files ...' Generating corresponding files ... cat debian/missing-sources/test_sorted.sam| samtools view -Sb - > tests/test_data/test_sorted.bam cat debian/missing-sources/control.sam| samtools view -Sb - > pyranges/example_data/control.bam samtools index tests/test_data/test_sorted.bam tests/test_data/test_sorted.bam.bai samtools index pyranges/example_data/control.bam pyranges/example_data/control.bam.bai make[1]: Leaving directory '/build/reproducible-path/pyranges-0.0.111+ds' dh_auto_test -O--buildsystem=pybuild I: pybuild pybuild:308: mkdir -pv /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges && cp -av /build/reproducible-path/pyranges-0.0.111+ds/tests/*.bed /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests && cp -av /build/reproducible-path/pyranges-0.0.111+ds/tests/test_data /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests && cp -av /build/reproducible-path/pyranges-0.0.111+ds/tests/data /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests && cp -av /build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges '/build/reproducible-path/pyranges-0.0.111+ds/tests/chip_10.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/chip_10.bed' '/build/reproducible-path/pyranges-0.0.111+ds/tests/f1.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/f1.bed' '/build/reproducible-path/pyranges-0.0.111+ds/tests/f2.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/f2.bed' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data/ensembl.gtf' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data/ensembl.gtf' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data/gencode.gff3' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data/gencode.gff3' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data/ucsc_df_to_parse.txt' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data/ucsc_df_to_parse.txt' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data/test_sorted.bam' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data/test_sorted.bam' '/build/reproducible-path/pyranges-0.0.111+ds/tests/test_data/test_sorted.bam.bai' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_data/test_sorted.bam.bai' '/build/reproducible-path/pyranges-0.0.111+ds/tests/data' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/data' '/build/reproducible-path/pyranges-0.0.111+ds/tests/data/test_data.py' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/data/test_data.py' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/exons.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/exons.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/ensembl.gtf' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/ensembl.gtf' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/ucsc_human.bed.gz' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/ucsc_human.bed.gz' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/chipseq_background.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/chipseq_background.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/f2.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/f2.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/bw.bw' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/bw.bw' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/f1.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/f1.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/cpg.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/cpg.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/lamina.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/lamina.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/gencode_human.gtf.gz' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/gencode_human.gtf.gz' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/chipseq.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/chipseq.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/aorta.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/aorta.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/ensembl_human.gtf.gz' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/ensembl_human.gtf.gz' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/chromsizes.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/chromsizes.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/aorta2.bed' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/aorta2.bed' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/control.bam' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/control.bam' '/build/reproducible-path/pyranges-0.0.111+ds/pyranges/example_data/control.bam.bai' -> '/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/example_data/control.bam.bai' I: pybuild base:311: cd /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build; python3.13 -m pytest -v -n 12 ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3.13 cachedir: .pytest_cache hypothesis profile 'default' -> database=DirectoryBasedExampleDatabase(PosixPath('/build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/.hypothesis/examples')) rootdir: /build/reproducible-path/pyranges-0.0.111+ds plugins: xdist-3.6.1, hypothesis-6.127.4, typeguard-4.4.2 created: 12/12 workers 12 workers [531 items] scheduling tests via LoadScheduling tests/test_binary.py::test_nearest[None-False-opposite] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain1-method_chain1] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain12-method_chain12] tests/data/test_data.py::test_all_data tests/test_binary.py::test_coverage[False] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain45-method_chain45] tests/test_binary.py::test_nearest[downstream-False-same] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain34-method_chain34] tests/test_binary.py::test_k_nearest[downstream-True-opposite-last] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain23-method_chain23] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain56-method_chain56] tests/test_binary.py::test_k_nearest[None-False-False-last] [gw0] [ 0%] PASSED tests/data/test_data.py::test_all_data tests/test_binary.py::test_set_intersect[False] [gw9] [ 0%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain45-method_chain45] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain46-method_chain46] [gw10] [ 0%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain34-method_chain34] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain35-method_chain35] [gw8] [ 0%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain23-method_chain23] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain24-method_chain24] [gw6] [ 0%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain12-method_chain12] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain13-method_chain13] [gw11] [ 1%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain56-method_chain56] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain57-method_chain57] [gw7] [ 1%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain1-method_chain1] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain2-method_chain2] [gw9] [ 1%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain46-method_chain46] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain47-method_chain47] [gw8] [ 1%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain24-method_chain24] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain25-method_chain25] [gw6] [ 1%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain13-method_chain13] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain14-method_chain14] [gw11] [ 2%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain57-method_chain57] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain58-method_chain58] [gw10] [ 2%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain35-method_chain35] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain36-method_chain36] [gw7] [ 2%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain2-method_chain2] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain3-method_chain3] [gw8] [ 2%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain25-method_chain25] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain26-method_chain26] [gw9] [ 2%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain47-method_chain47] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain48-method_chain48] [gw6] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain14-method_chain14] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain15-method_chain15] [gw11] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain58-method_chain58] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain59-method_chain59] [gw9] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain48-method_chain48] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain49-method_chain49] [gw7] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain3-method_chain3] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain4-method_chain4] [gw8] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain26-method_chain26] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain27-method_chain27] [gw10] [ 3%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain36-method_chain36] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain37-method_chain37] [gw6] [ 4%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain15-method_chain15] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain16-method_chain16] [gw11] [ 4%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain59-method_chain59] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain60-method_chain60] [gw8] [ 4%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain27-method_chain27] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain28-method_chain28] [gw6] [ 4%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain16-method_chain16] [gw7] [ 4%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain4-method_chain4] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain17-method_chain17] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain5-method_chain5] [gw9] [ 5%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain49-method_chain49] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain50-method_chain50] [gw10] [ 5%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain37-method_chain37] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain38-method_chain38] [gw11] [ 5%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain60-method_chain60] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain61-method_chain61] [gw6] [ 5%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain17-method_chain17] [gw8] [ 5%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain28-method_chain28] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain18-method_chain18] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain29-method_chain29] [gw10] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain38-method_chain38] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain39-method_chain39] [gw9] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain50-method_chain50] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain51-method_chain51] [gw11] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain61-method_chain61] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain62-method_chain62] [gw6] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain18-method_chain18] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain19-method_chain19] [gw7] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain5-method_chain5] [gw8] [ 6%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain29-method_chain29] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain6-method_chain6] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain30-method_chain30] [gw9] [ 7%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain51-method_chain51] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain52-method_chain52] [gw11] [ 7%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain62-method_chain62] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain63-method_chain63] [gw6] [ 7%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain19-method_chain19] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain20-method_chain20] [gw8] [ 7%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain30-method_chain30] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain31-method_chain31] [gw10] [ 7%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain39-method_chain39] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain40-method_chain40] [gw7] [ 8%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain6-method_chain6] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain7-method_chain7] [gw11] [ 8%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain63-method_chain63] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain64-method_chain64] [gw6] [ 8%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain20-method_chain20] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain21-method_chain21] [gw8] [ 8%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain31-method_chain31] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain32-method_chain32] [gw9] [ 8%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain52-method_chain52] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain53-method_chain53] [gw7] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain7-method_chain7] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain8-method_chain8] [gw11] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain64-method_chain64] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain65-method_chain65] [gw8] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain32-method_chain32] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain33-method_chain33] [gw10] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain40-method_chain40] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain41-method_chain41] [gw6] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain21-method_chain21] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain22-method_chain22] [gw9] [ 9%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain53-method_chain53] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain54-method_chain54] [gw11] [ 10%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain65-method_chain65] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain66-method_chain66] [gw8] [ 10%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain33-method_chain33] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain67-method_chain67] [gw7] [ 10%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain8-method_chain8] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain9-method_chain9] [gw6] [ 10%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain22-method_chain22] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain82-method_chain82] [gw10] [ 10%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain41-method_chain41] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain42-method_chain42] [gw11] [ 11%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain66-method_chain66] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain97-method_chain97] [gw8] [ 11%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain67-method_chain67] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain68-method_chain68] [gw7] [ 11%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain9-method_chain9] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain10-method_chain10] [gw6] [ 11%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain82-method_chain82] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain83-method_chain83] [gw9] [ 11%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain54-method_chain54] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain55-method_chain55] [gw11] [ 12%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain97-method_chain97] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain98-method_chain98] [gw10] [ 12%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain42-method_chain42] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain43-method_chain43] [gw8] [ 12%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain68-method_chain68] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain69-method_chain69] [gw6] [ 12%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain83-method_chain83] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain84-method_chain84] [gw7] [ 12%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain10-method_chain10] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain11-method_chain11] [gw3] [ 12%] PASSED tests/test_binary.py::test_nearest[downstream-False-same] tests/test_binary.py::test_nearest[downstream-False-opposite] [gw9] [ 13%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain55-method_chain55] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain111-method_chain111] [gw10] [ 13%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain43-method_chain43] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain44-method_chain44] [gw8] [ 13%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain69-method_chain69] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain70-method_chain70] [gw2] [ 13%] PASSED tests/test_binary.py::test_nearest[None-False-opposite] tests/test_binary.py::test_nearest[upstream-True-False] [gw7] [ 13%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain11-method_chain11] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain124-method_chain124] [gw11] [ 14%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain98-method_chain98] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain99-method_chain99] [gw10] [ 14%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain44-method_chain44] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain137-method_chain137] [gw6] [ 14%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain84-method_chain84] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain85-method_chain85] [gw9] [ 14%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain111-method_chain111] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain112-method_chain112] [gw8] [ 14%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain70-method_chain70] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain71-method_chain71] [gw7] [ 15%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain124-method_chain124] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain125-method_chain125] [gw11] [ 15%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain99-method_chain99] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain100-method_chain100] [gw10] [ 15%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain137-method_chain137] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain138-method_chain138] [gw9] [ 15%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain112-method_chain112] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain113-method_chain113] [gw8] [ 15%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain71-method_chain71] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain72-method_chain72] [gw7] [ 16%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain125-method_chain125] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain126-method_chain126] [gw4] [ 16%] PASSED tests/test_binary.py::test_k_nearest[downstream-True-opposite-last] [gw6] [ 16%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain85-method_chain85] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain86-method_chain86] tests/test_binary.py::test_k_nearest[downstream-True-same-last] [gw11] [ 16%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain100-method_chain100] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain101-method_chain101] [gw8] [ 16%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain72-method_chain72] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain73-method_chain73] [gw9] [ 16%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain113-method_chain113] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain114-method_chain114] [gw1] [ 17%] PASSED tests/test_binary.py::test_coverage[False] [gw7] [ 17%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain126-method_chain126] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain127-method_chain127] tests/test_binary.py::test_coverage[same] [gw6] [ 17%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain86-method_chain86] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain87-method_chain87] [gw9] [ 17%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain114-method_chain114] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain115-method_chain115] [gw0] [ 17%] PASSED tests/test_binary.py::test_set_intersect[False] [gw11] [ 18%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain101-method_chain101] tests/test_binary.py::test_set_intersect[same] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain102-method_chain102] [gw10] [ 18%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain138-method_chain138] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain139-method_chain139] [gw8] [ 18%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain73-method_chain73] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain74-method_chain74] [gw7] [ 18%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain127-method_chain127] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain128-method_chain128] [gw9] [ 18%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain115-method_chain115] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain116-method_chain116] [gw5] [ 19%] PASSED tests/test_binary.py::test_k_nearest[None-False-False-last] tests/test_binary.py::test_k_nearest[None-True-opposite-last] [gw8] [ 19%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain74-method_chain74] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain75-method_chain75] [gw6] [ 19%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain87-method_chain87] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain88-method_chain88] [gw10] [ 19%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain139-method_chain139] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain140-method_chain140] [gw11] [ 19%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain102-method_chain102] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain103-method_chain103] [gw7] [ 19%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain128-method_chain128] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain129-method_chain129] [gw9] [ 20%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain116-method_chain116] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain117-method_chain117] [gw8] [ 20%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain75-method_chain75] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain76-method_chain76] [gw7] [ 20%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain129-method_chain129] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain130-method_chain130] [gw6] [ 20%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain88-method_chain88] [gw10] [ 20%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain140-method_chain140] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain89-method_chain89] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain141-method_chain141] [gw9] [ 21%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain117-method_chain117] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain118-method_chain118] [gw11] [ 21%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain103-method_chain103] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain104-method_chain104] [gw7] [ 21%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain130-method_chain130] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain131-method_chain131] [gw8] [ 21%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain76-method_chain76] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain77-method_chain77] [gw9] [ 21%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain118-method_chain118] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain119-method_chain119] [gw10] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain141-method_chain141] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain142-method_chain142] [gw7] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain131-method_chain131] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain132-method_chain132] [gw6] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain89-method_chain89] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain90-method_chain90] [gw8] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain77-method_chain77] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain78-method_chain78] [gw11] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain104-method_chain104] [gw10] [ 22%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain142-method_chain142] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain105-method_chain105] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain143-method_chain143] [gw9] [ 23%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain119-method_chain119] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain120-method_chain120] [gw7] [ 23%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain132-method_chain132] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain133-method_chain133] [gw8] [ 23%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain78-method_chain78] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain79-method_chain79] [gw10] [ 23%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain143-method_chain143] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain144-method_chain144] [gw6] [ 23%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain90-method_chain90] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain91-method_chain91] [gw11] [ 24%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain105-method_chain105] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain106-method_chain106] [gw9] [ 24%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain120-method_chain120] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain121-method_chain121] [gw8] [ 24%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain79-method_chain79] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain80-method_chain80] [gw10] [ 24%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain144-method_chain144] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain145-method_chain145] [gw6] [ 24%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain91-method_chain91] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain92-method_chain92] [gw7] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain133-method_chain133] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain134-method_chain134] [gw9] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain121-method_chain121] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain122-method_chain122] [gw11] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain106-method_chain106] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain107-method_chain107] [gw8] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain80-method_chain80] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain81-method_chain81] [gw10] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain145-method_chain145] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain146-method_chain146] [gw6] [ 25%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain92-method_chain92] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain93-method_chain93] [gw9] [ 26%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain122-method_chain122] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain123-method_chain123] [gw8] [ 26%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain81-method_chain81] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain149-method_chain149] [gw7] [ 26%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain134-method_chain134] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain135-method_chain135] [gw10] [ 26%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain146-method_chain146] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain147-method_chain147] [gw11] [ 26%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain107-method_chain107] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain108-method_chain108] [gw3] [ 27%] PASSED tests/test_binary.py::test_nearest[downstream-False-opposite] tests/test_binary.py::test_jaccard[False] [gw6] [ 27%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain93-method_chain93] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain94-method_chain94] [gw9] [ 27%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain123-method_chain123] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain161-method_chain161] [gw11] [ 27%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain108-method_chain108] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain109-method_chain109] [gw6] [ 27%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain94-method_chain94] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain95-method_chain95] [gw7] [ 28%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain135-method_chain135] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain136-method_chain136] [gw8] [ 28%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain149-method_chain149] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain150-method_chain150] [gw10] [ 28%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain147-method_chain147] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain148-method_chain148] [gw6] [ 28%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain95-method_chain95] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain96-method_chain96] [gw9] [ 28%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain161-method_chain161] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain162-method_chain162] [gw11] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain109-method_chain109] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain110-method_chain110] [gw7] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain136-method_chain136] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain172-method_chain172] [gw9] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain162-method_chain162] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain163-method_chain163] [gw8] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain150-method_chain150] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain151-method_chain151] [gw6] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain96-method_chain96] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain193-method_chain193] [gw11] [ 29%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain110-method_chain110] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain203-method_chain203] [gw10] [ 30%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain148-method_chain148] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain183-method_chain183] [gw7] [ 30%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain172-method_chain172] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain173-method_chain173] [gw9] [ 30%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain163-method_chain163] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain164-method_chain164] [gw2] [ 30%] PASSED tests/test_binary.py::test_nearest[upstream-True-False] tests/test_binary.py::test_nearest[upstream-True-same] [gw6] [ 30%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain193-method_chain193] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain194-method_chain194] [gw8] [ 31%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain151-method_chain151] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain152-method_chain152] [gw9] [ 31%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain164-method_chain164] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain165-method_chain165] [gw7] [ 31%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain173-method_chain173] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain174-method_chain174] [gw11] [ 31%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain203-method_chain203] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain204-method_chain204] [gw6] [ 31%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain194-method_chain194] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain195-method_chain195] [gw10] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain183-method_chain183] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain184-method_chain184] [gw9] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain165-method_chain165] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain166-method_chain166] [gw7] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain174-method_chain174] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain175-method_chain175] [gw6] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain195-method_chain195] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain196-method_chain196] [gw11] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain204-method_chain204] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain205-method_chain205] [gw9] [ 32%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain166-method_chain166] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain167-method_chain167] [gw8] [ 33%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain152-method_chain152] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain153-method_chain153] [gw10] [ 33%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain184-method_chain184] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain185-method_chain185] [gw7] [ 33%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain175-method_chain175] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain176-method_chain176] [gw11] [ 33%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain205-method_chain205] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain206-method_chain206] [gw9] [ 33%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain167-method_chain167] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain168-method_chain168] [gw7] [ 34%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain176-method_chain176] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain177-method_chain177] [gw8] [ 34%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain153-method_chain153] [gw10] [ 34%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain185-method_chain185] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain154-method_chain154] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain186-method_chain186] [gw11] [ 34%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain206-method_chain206] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain207-method_chain207] [gw6] [ 34%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain196-method_chain196] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain197-method_chain197] [gw9] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain168-method_chain168] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain169-method_chain169] [gw7] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain177-method_chain177] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain178-method_chain178] [gw10] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain186-method_chain186] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain187-method_chain187] [gw11] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain207-method_chain207] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain208-method_chain208] [gw8] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain154-method_chain154] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain155-method_chain155] [gw9] [ 35%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain169-method_chain169] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain170-method_chain170] [gw7] [ 36%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain178-method_chain178] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain179-method_chain179] [gw6] [ 36%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain197-method_chain197] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain198-method_chain198] [gw1] [ 36%] PASSED tests/test_binary.py::test_coverage[same] tests/test_binary.py::test_coverage[opposite] [gw7] [ 36%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain179-method_chain179] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain180-method_chain180] [gw9] [ 36%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain170-method_chain170] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain171-method_chain171] [gw11] [ 37%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain208-method_chain208] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain209-method_chain209] [gw0] [ 37%] PASSED tests/test_binary.py::test_set_intersect[same] tests/test_binary.py::test_set_union[False] [gw8] [ 37%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain155-method_chain155] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain156-method_chain156] [gw10] [ 37%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain187-method_chain187] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain188-method_chain188] [gw4] [ 37%] PASSED tests/test_binary.py::test_k_nearest[downstream-True-same-last] tests/test_binary.py::test_k_nearest[downstream-True-False-last] [gw3] [ 38%] PASSED tests/test_binary.py::test_jaccard[False] tests/test_binary.py::test_jaccard[same] [gw9] [ 38%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain171-method_chain171] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain212-method_chain212] [gw7] [ 38%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain180-method_chain180] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain181-method_chain181] [gw6] [ 38%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain198-method_chain198] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain199-method_chain199] [gw11] [ 38%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain209-method_chain209] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain210-method_chain210] [gw8] [ 38%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain156-method_chain156] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain157-method_chain157] [gw5] [ 39%] PASSED tests/test_binary.py::test_k_nearest[None-True-opposite-last] tests/test_binary.py::test_k_nearest[None-True-same-last] [gw7] [ 39%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain181-method_chain181] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain182-method_chain182] [gw9] [ 39%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain212-method_chain212] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain213-method_chain213] [gw10] [ 39%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain188-method_chain188] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain189-method_chain189] [gw11] [ 39%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain210-method_chain210] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain211-method_chain211] [gw8] [ 40%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain157-method_chain157] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain158-method_chain158] [gw6] [ 40%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain199-method_chain199] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain200-method_chain200] [gw9] [ 40%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain213-method_chain213] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain214-method_chain214] [gw11] [ 40%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain211-method_chain211] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain230-method_chain230] [gw10] [ 40%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain189-method_chain189] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain190-method_chain190] [gw8] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain158-method_chain158] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain159-method_chain159] [gw7] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain182-method_chain182] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain221-method_chain221] [gw9] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain214-method_chain214] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain215-method_chain215] [gw6] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain200-method_chain200] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain201-method_chain201] [gw11] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain230-method_chain230] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain231-method_chain231] [gw10] [ 41%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain190-method_chain190] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain191-method_chain191] [gw7] [ 42%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain221-method_chain221] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain222-method_chain222] [gw9] [ 42%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain215-method_chain215] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain216-method_chain216] [gw8] [ 42%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain159-method_chain159] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain160-method_chain160] [gw10] [ 42%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain191-method_chain191] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain192-method_chain192] [gw9] [ 42%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain216-method_chain216] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain217-method_chain217] [gw7] [ 43%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain222-method_chain222] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain223-method_chain223] [gw8] [ 43%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain160-method_chain160] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain238-method_chain238] [gw11] [ 43%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain231-method_chain231] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain232-method_chain232] [gw10] [ 43%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain192-method_chain192] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain246-method_chain246] [gw6] [ 43%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain201-method_chain201] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain202-method_chain202] [gw9] [ 44%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain217-method_chain217] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain218-method_chain218] [gw7] [ 44%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain223-method_chain223] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain224-method_chain224] [gw8] [ 44%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain238-method_chain238] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain239-method_chain239] [gw11] [ 44%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain232-method_chain232] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain233-method_chain233] [gw8] [ 44%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain239-method_chain239] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain240-method_chain240] [gw9] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain218-method_chain218] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain219-method_chain219] [gw7] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain224-method_chain224] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain225-method_chain225] [gw6] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain202-method_chain202] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain254-method_chain254] [gw10] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain246-method_chain246] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain247-method_chain247] [gw8] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain240-method_chain240] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain241-method_chain241] [gw11] [ 45%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain233-method_chain233] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain234-method_chain234] [gw7] [ 46%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain225-method_chain225] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain226-method_chain226] [gw9] [ 46%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain219-method_chain219] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain220-method_chain220] [gw6] [ 46%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain254-method_chain254] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain255-method_chain255] [gw10] [ 46%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain247-method_chain247] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain248-method_chain248] [gw8] [ 46%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain241-method_chain241] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain242-method_chain242] [gw7] [ 47%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain226-method_chain226] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain227-method_chain227] [gw6] [ 47%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain255-method_chain255] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain256-method_chain256] [gw9] [ 47%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain220-method_chain220] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain261-method_chain261] [gw11] [ 47%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain234-method_chain234] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain235-method_chain235] [gw8] [ 47%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain242-method_chain242] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain243-method_chain243] [gw7] [ 48%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain227-method_chain227] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain228-method_chain228] [gw2] [ 48%] PASSED tests/test_binary.py::test_nearest[upstream-True-same] tests/test_binary.py::test_nearest[upstream-True-opposite] [gw10] [ 48%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain248-method_chain248] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain249-method_chain249] [gw6] [ 48%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain256-method_chain256] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain257-method_chain257] [gw9] [ 48%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain261-method_chain261] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain262-method_chain262] [gw7] [ 48%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain228-method_chain228] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain229-method_chain229] [gw11] [ 49%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain235-method_chain235] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain236-method_chain236] [gw8] [ 49%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain243-method_chain243] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain244-method_chain244] [gw9] [ 49%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain262-method_chain262] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain263-method_chain263] [gw10] [ 49%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain249-method_chain249] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain250-method_chain250] [gw7] [ 49%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain229-method_chain229] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain268-method_chain268] [gw6] [ 50%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain257-method_chain257] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain258-method_chain258] [gw8] [ 50%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain244-method_chain244] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain245-method_chain245] [gw9] [ 50%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain263-method_chain263] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain264-method_chain264] [gw3] [ 50%] PASSED tests/test_binary.py::test_jaccard[same] tests/test_binary.py::test_join[False] [gw7] [ 50%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain268-method_chain268] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain269-method_chain269] [gw11] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain236-method_chain236] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain237-method_chain237] [gw6] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain258-method_chain258] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain259-method_chain259] [gw9] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain264-method_chain264] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain265-method_chain265] [gw10] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain250-method_chain250] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain251-method_chain251] [gw7] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain269-method_chain269] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain270-method_chain270] [gw8] [ 51%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain245-method_chain245] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain275-method_chain275] [gw9] [ 52%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain265-method_chain265] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain266-method_chain266] [gw11] [ 52%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain237-method_chain237] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain281-method_chain281] [gw6] [ 52%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain259-method_chain259] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain260-method_chain260] [gw7] [ 52%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain270-method_chain270] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain271-method_chain271] [gw10] [ 52%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain251-method_chain251] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain252-method_chain252] [gw8] [ 53%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain275-method_chain275] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain276-method_chain276] [gw6] [ 53%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain260-method_chain260] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain287-method_chain287] [gw9] [ 53%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain266-method_chain266] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain267-method_chain267] [gw8] [ 53%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain276-method_chain276] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain277-method_chain277] [gw7] [ 53%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain271-method_chain271] [gw11] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain281-method_chain281] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain272-method_chain272] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain282-method_chain282] [gw9] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain267-method_chain267] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain293-method_chain293] [gw10] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain252-method_chain252] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain253-method_chain253] [gw6] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain287-method_chain287] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain288-method_chain288] [gw8] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain277-method_chain277] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain278-method_chain278] [gw7] [ 54%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain272-method_chain272] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain273-method_chain273] [gw9] [ 55%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain293-method_chain293] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain294-method_chain294] [gw11] [ 55%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain282-method_chain282] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain283-method_chain283] [gw10] [ 55%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain253-method_chain253] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain299-method_chain299] [gw6] [ 55%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain288-method_chain288] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain289-method_chain289] [gw8] [ 55%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain278-method_chain278] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain279-method_chain279] [gw1] [ 56%] PASSED tests/test_binary.py::test_coverage[opposite] tests/test_binary.py::test_subtraction[same] [gw7] [ 56%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain273-method_chain273] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain274-method_chain274] [gw6] [ 56%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain289-method_chain289] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain290-method_chain290] [gw8] [ 56%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain279-method_chain279] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain280-method_chain280] [gw11] [ 56%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain283-method_chain283] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain284-method_chain284] [gw9] [ 57%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain294-method_chain294] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain295-method_chain295] [gw7] [ 57%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain274-method_chain274] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain304-method_chain304] [gw10] [ 57%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain299-method_chain299] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain300-method_chain300] [gw6] [ 57%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain290-method_chain290] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain291-method_chain291] [gw7] [ 57%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain304-method_chain304] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain305-method_chain305] [gw6] [ 58%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain291-method_chain291] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain292-method_chain292] [gw11] [ 58%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain284-method_chain284] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain285-method_chain285] [gw8] [ 58%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain280-method_chain280] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain309-method_chain309] [gw9] [ 58%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain295-method_chain295] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain296-method_chain296] [gw10] [ 58%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain300-method_chain300] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain301-method_chain301] [gw0] [ 58%] PASSED tests/test_binary.py::test_set_union[False] tests/test_binary.py::test_set_union[same] [gw6] [ 59%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain292-method_chain292] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain314-method_chain314] [gw7] [ 59%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain305-method_chain305] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain306-method_chain306] [gw8] [ 59%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain309-method_chain309] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain310-method_chain310] [gw10] [ 59%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain301-method_chain301] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain302-method_chain302] [gw11] [ 59%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain285-method_chain285] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain286-method_chain286] [gw6] [ 60%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain314-method_chain314] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain315-method_chain315] [gw9] [ 60%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain296-method_chain296] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain297-method_chain297] [gw8] [ 60%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain310-method_chain310] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain311-method_chain311] [gw7] [ 60%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain306-method_chain306] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain307-method_chain307] [gw4] [ 60%] PASSED tests/test_binary.py::test_k_nearest[downstream-True-False-last] tests/test_binary.py::test_k_nearest[upstream-False-opposite-last] [gw10] [ 61%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain302-method_chain302] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain303-method_chain303] [gw6] [ 61%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain315-method_chain315] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain316-method_chain316] [gw8] [ 61%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain311-method_chain311] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain312-method_chain312] [gw11] [ 61%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain286-method_chain286] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain319-method_chain319] [gw5] [ 61%] PASSED tests/test_binary.py::test_k_nearest[None-True-same-last] [gw2] [ 61%] PASSED tests/test_binary.py::test_nearest[upstream-True-opposite] [gw9] [ 62%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain297-method_chain297] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain298-method_chain298] tests/test_binary.py::test_k_nearest[None-True-False-last] tests/test_binary.py::test_nearest[upstream-False-False] [gw7] [ 62%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain307-method_chain307] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain308-method_chain308] [gw10] [ 62%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain303-method_chain303] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain324-method_chain324] [gw8] [ 62%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain312-method_chain312] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain313-method_chain313] [gw11] [ 62%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain319-method_chain319] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain320-method_chain320] [gw6] [ 63%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain316-method_chain316] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain317-method_chain317] [gw3] [ 63%] PASSED tests/test_binary.py::test_join[False] tests/test_binary.py::test_join[same] [gw10] [ 63%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain324-method_chain324] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain325-method_chain325] [gw7] [ 63%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain308-method_chain308] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain332-method_chain332] [gw9] [ 63%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain298-method_chain298] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain328-method_chain328] [gw8] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain313-method_chain313] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain336-method_chain336] [gw6] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain317-method_chain317] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain318-method_chain318] [gw10] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain325-method_chain325] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain326-method_chain326] [gw11] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain320-method_chain320] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain321-method_chain321] [gw9] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain328-method_chain328] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain329-method_chain329] [gw7] [ 64%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain332-method_chain332] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain333-method_chain333] [gw8] [ 65%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain336-method_chain336] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain337-method_chain337] [gw10] [ 65%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain326-method_chain326] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain327-method_chain327] [gw6] [ 65%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain318-method_chain318] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain340-method_chain340] [gw11] [ 65%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain321-method_chain321] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain322-method_chain322] [gw8] [ 65%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain337-method_chain337] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain338-method_chain338] [gw6] [ 66%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain340-method_chain340] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain341-method_chain341] [gw7] [ 66%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain333-method_chain333] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain334-method_chain334] [gw10] [ 66%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain327-method_chain327] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain344-method_chain344] [gw9] [ 66%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain329-method_chain329] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain330-method_chain330] [gw11] [ 66%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain322-method_chain322] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain323-method_chain323] [gw8] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain338-method_chain338] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain339-method_chain339] [gw6] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain341-method_chain341] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain342-method_chain342] [gw11] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain323-method_chain323] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain348-method_chain348] [gw8] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain339-method_chain339] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain351-method_chain351] [gw10] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain344-method_chain344] [gw9] [ 67%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain330-method_chain330] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain345-method_chain345] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain331-method_chain331] [gw7] [ 68%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain334-method_chain334] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain335-method_chain335] [gw6] [ 68%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain342-method_chain342] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain343-method_chain343] [gw8] [ 68%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain351-method_chain351] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain352-method_chain352] [gw10] [ 68%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain345-method_chain345] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain346-method_chain346] [gw9] [ 68%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain331-method_chain331] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain354-method_chain354] [gw7] [ 69%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain335-method_chain335] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain357-method_chain357] [gw11] [ 69%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain348-method_chain348] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain349-method_chain349] [gw6] [ 69%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain343-method_chain343] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain360-method_chain360] [gw8] [ 69%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain352-method_chain352] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain353-method_chain353] [gw9] [ 69%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain354-method_chain354] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain355-method_chain355] [gw7] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain357-method_chain357] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain358-method_chain358] [gw10] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain346-method_chain346] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain347-method_chain347] [gw11] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain349-method_chain349] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain350-method_chain350] [gw6] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain360-method_chain360] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain361-method_chain361] [gw8] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain353-method_chain353] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain363-method_chain363] [gw7] [ 70%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain358-method_chain358] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain359-method_chain359] [gw9] [ 71%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain355-method_chain355] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain356-method_chain356] [gw6] [ 71%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain361-method_chain361] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain362-method_chain362] [gw10] [ 71%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain347-method_chain347] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain366-method_chain366] [gw8] [ 71%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain363-method_chain363] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain364-method_chain364] [gw11] [ 71%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain350-method_chain350] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain369-method_chain369] [gw7] [ 72%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain359-method_chain359] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain372-method_chain372] [gw6] [ 72%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain362-method_chain362] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain376-method_chain376] [gw9] [ 72%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain356-method_chain356] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain374-method_chain374] [gw10] [ 72%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain366-method_chain366] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain367-method_chain367] [gw11] [ 72%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain369-method_chain369] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain370-method_chain370] [gw8] [ 73%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain364-method_chain364] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain365-method_chain365] [gw7] [ 73%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain372-method_chain372] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain373-method_chain373] [gw6] [ 73%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain376-method_chain376] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain377-method_chain377] [gw9] [ 73%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain374-method_chain374] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain375-method_chain375] [gw10] [ 73%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain367-method_chain367] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain368-method_chain368] [gw11] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain370-method_chain370] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain371-method_chain371] [gw6] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain377-method_chain377] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain382-method_chain382] [gw7] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain373-method_chain373] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain380-method_chain380] [gw8] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain365-method_chain365] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain378-method_chain378] [gw9] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain375-method_chain375] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain384-method_chain384] [gw10] [ 74%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain368-method_chain368] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain386-method_chain386] [gw1] [ 75%] PASSED tests/test_binary.py::test_subtraction[same] tests/test_binary.py::test_subtraction[opposite] [gw3] [ 75%] PASSED tests/test_binary.py::test_join[same] [gw11] [ 75%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain371-method_chain371] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain388-method_chain388] tests/test_binary.py::test_join[opposite] [gw6] [ 75%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain382-method_chain382] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain383-method_chain383] [gw7] [ 75%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain380-method_chain380] [gw10] [ 76%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain386-method_chain386] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain381-method_chain381] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain387-method_chain387] [gw4] [ 76%] PASSED tests/test_binary.py::test_k_nearest[upstream-False-opposite-last] tests/test_binary.py::test_k_nearest[upstream-False-same-last] [gw9] [ 76%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain384-method_chain384] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain385-method_chain385] [gw0] [ 76%] PASSED tests/test_binary.py::test_set_union[same] [gw11] [ 76%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain388-method_chain388] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain389-method_chain389] tests/test_binary.py::test_overlap[False] [gw8] [ 77%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain378-method_chain378] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain379-method_chain379] [gw2] [ 77%] PASSED tests/test_binary.py::test_nearest[upstream-False-False] tests/test_binary.py::test_nearest[upstream-False-same] [gw10] [ 77%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain387-method_chain387] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain394-method_chain394] [gw7] [ 77%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain381-method_chain381] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain392-method_chain392] [gw11] [ 77%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain389-method_chain389] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain397-method_chain397] [gw9] [ 77%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain385-method_chain385] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain396-method_chain396] [gw6] [ 78%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain383-method_chain383] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain390-method_chain390] [gw8] [ 78%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain379-method_chain379] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain398-method_chain398] [gw10] [ 78%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain394-method_chain394] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain395-method_chain395] [gw6] [ 78%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain390-method_chain390] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain391-method_chain391] [gw9] [ 78%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain396-method_chain396] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain400-method_chain400] [gw11] [ 79%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain397-method_chain397] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain399-method_chain399] [gw7] [ 79%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain392-method_chain392] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain393-method_chain393] [gw8] [ 79%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain398-method_chain398] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain401-method_chain401] [gw6] [ 79%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain391-method_chain391] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain403-method_chain403] [gw10] [ 79%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain395-method_chain395] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain402-method_chain402] [gw9] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain400-method_chain400] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain404-method_chain404] [gw11] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain399-method_chain399] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain405-method_chain405] [gw6] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain403-method_chain403] [gw7] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain393-method_chain393] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain408-method_chain408] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain406-method_chain406] [gw8] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain401-method_chain401] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain407-method_chain407] [gw10] [ 80%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain402-method_chain402] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain409-method_chain409] [gw9] [ 81%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain404-method_chain404] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain410-method_chain410] [gw11] [ 81%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain405-method_chain405] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain411-method_chain411] [gw6] [ 81%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain408-method_chain408] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain412-method_chain412] [gw8] [ 81%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain407-method_chain407] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain414-method_chain414] [gw7] [ 81%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain406-method_chain406] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain413-method_chain413] [gw10] [ 82%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain409-method_chain409] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain415-method_chain415] [gw9] [ 82%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain410-method_chain410] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain416-method_chain416] [gw6] [ 82%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain412-method_chain412] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain418-method_chain418] [gw11] [ 82%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain411-method_chain411] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain417-method_chain417] [gw8] [ 82%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain414-method_chain414] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain419-method_chain419] [gw10] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain415-method_chain415] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain421-method_chain421] [gw9] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain416-method_chain416] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain422-method_chain422] [gw7] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain413-method_chain413] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain420-method_chain420] [gw11] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain417-method_chain417] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain424-method_chain424] [gw8] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain419-method_chain419] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain425-method_chain425] [gw6] [ 83%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain418-method_chain418] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain423-method_chain423] [gw10] [ 84%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain421-method_chain421] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain426-method_chain426] [gw9] [ 84%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain422-method_chain422] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain427-method_chain427] [gw11] [ 84%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain424-method_chain424] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain429-method_chain429] [gw7] [ 84%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain420-method_chain420] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain428-method_chain428] [gw8] [ 84%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain425-method_chain425] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain430-method_chain430] [gw5] [ 85%] PASSED tests/test_binary.py::test_k_nearest[None-True-False-last] [gw6] [ 85%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain423-method_chain423] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain431-method_chain431] tests/test_binary.py::test_k_nearest_1_vs_nearest [gw10] [ 85%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain426-method_chain426] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain432-method_chain432] [gw3] [ 85%] PASSED tests/test_binary.py::test_join[opposite] tests/test_binary.py::test_reldist [gw11] [ 85%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain429-method_chain429] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain434-method_chain434] [gw9] [ 86%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain427-method_chain427] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain433-method_chain433] [gw7] [ 86%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain428-method_chain428] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain435-method_chain435] [gw6] [ 86%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain431-method_chain431] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain437-method_chain437] [gw8] [ 86%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain430-method_chain430] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain436-method_chain436] [gw10] [ 86%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain432-method_chain432] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain438-method_chain438] [gw7] [ 87%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain435-method_chain435] tests/test_genomicfeatures.py::test_introns_single [gw11] [ 87%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain434-method_chain434] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain439-method_chain439] [gw6] [ 87%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain437-method_chain437] tests/test_getset_attr.py::test_getsetattr [gw6] [ 87%] PASSED tests/test_getset_attr.py::test_getsetattr tests/test_io.py::test_read_bed [gw6] [ 87%] PASSED tests/test_io.py::test_read_bed tests/test_pickle.py::test_pickle [gw6] [ 87%] PASSED tests/test_pickle.py::test_pickle tests/test_stranded.py::test_stranded [gw8] [ 88%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain436-method_chain436] tests/test_getset_attr.py::test_getsetattr_fails [gw8] [ 88%] PASSED tests/test_getset_attr.py::test_getsetattr_fails tests/test_unary.py::test_merge[True] [gw6] [ 88%] PASSED tests/test_stranded.py::test_stranded tests/test_stranded.py::test_unstrand [gw6] [ 88%] PASSED tests/test_stranded.py::test_unstrand tests/test_unary.py::test_cluster[True] [gw10] [ 88%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain438-method_chain438] tests/test_getset_attr.py::test_getsetattr_with_str [gw10] [ 89%] PASSED tests/test_getset_attr.py::test_getsetattr_with_str tests/test_unary.py::test_cluster_by[True] [gw9] [ 89%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain433-method_chain433] tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain440-method_chain440] [gw0] [ 89%] PASSED tests/test_binary.py::test_overlap[False] tests/test_binary.py::test_overlap[same] [gw11] [ 89%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain439-method_chain439] tests/test_io.py::test_read_gff3 [gw11] [ 89%] PASSED tests/test_io.py::test_read_gff3 tests/test_unary.py::test_merge_by[False] [gw7] [ 90%] PASSED tests/test_genomicfeatures.py::test_introns_single tests/test_io.py::test_read_gtf [gw7] [ 90%] PASSED tests/test_io.py::test_read_gtf tests/test_unary.py::test_init[True] [gw9] [ 90%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain440-method_chain440] tests/test_unary.py::test_merge_by[True] [gw7] [ 90%] PASSED tests/test_unary.py::test_init[True] tests/test_unary.py::test_init[False] [gw2] [ 90%] PASSED tests/test_binary.py::test_nearest[upstream-False-same] tests/test_binary.py::test_nearest[upstream-False-opposite] [gw4] [ 90%] PASSED tests/test_binary.py::test_k_nearest[upstream-False-same-last] tests/test_binary.py::test_k_nearest[upstream-False-False-last] [gw7] [ 91%] PASSED tests/test_unary.py::test_init[False] tests/test_unary.py::test_summary [gw1] [ 91%] PASSED tests/test_binary.py::test_subtraction[opposite] tests/test_binary.py::test_subtraction[False] [gw3] [ 91%] PASSED tests/test_binary.py::test_reldist tests/test_binary.py::test_k_nearest[downstream-False-opposite-last] [gw0] [ 91%] PASSED tests/test_binary.py::test_overlap[same] tests/test_binary.py::test_overlap[opposite] [gw8] [ 91%] PASSED tests/test_unary.py::test_merge[True] tests/test_unary.py::test_merge[False] [gw5] [ 92%] PASSED tests/test_binary.py::test_k_nearest_1_vs_nearest tests/test_change_chromosome_custom.py::test_change_chromosomes [gw5] [ 92%] PASSED tests/test_change_chromosome_custom.py::test_change_chromosomes tests/test_concat.py::test_concat_stranded_unstranded [gw5] [ 92%] PASSED tests/test_concat.py::test_concat_stranded_unstranded tests/test_concat.py::test_concat_unstranded_unstranded [gw5] [ 92%] PASSED tests/test_concat.py::test_concat_unstranded_unstranded tests/test_concat.py::test_concat_unstranded_stranded [gw5] [ 92%] PASSED tests/test_concat.py::test_concat_unstranded_stranded tests/test_count_overlaps.py::test_strand_vs_strand_same [gw5] [ 93%] PASSED tests/test_count_overlaps.py::test_strand_vs_strand_same tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain0-method_chain0] [gw11] [ 93%] PASSED tests/test_unary.py::test_merge_by[False] [gw7] [ 93%] PASSED tests/test_unary.py::test_summary tests/windows/test_windows.py::test_windows [gw7] [ 93%] PASSED tests/windows/test_windows.py::test_windows tests/test_unary.py::test_windows [gw9] [ 93%] PASSED tests/test_unary.py::test_merge_by[True] tests/test_unary.py::test_getitem [gw5] [ 93%] PASSED tests/test_do_not_error.py::test_three_in_a_row[strandedness_chain0-method_chain0] [gw2] [ 94%] PASSED tests/test_binary.py::test_nearest[upstream-False-opposite] tests/test_binary.py::test_nearest[downstream-True-False] [gw6] [ 94%] PASSED tests/test_unary.py::test_cluster[True] tests/test_unary.py::test_cluster[False] [gw10] [ 94%] PASSED tests/test_unary.py::test_cluster_by[True] tests/test_unary.py::test_cluster_by[False] [gw0] [ 94%] PASSED tests/test_binary.py::test_overlap[opposite] tests/test_binary.py::test_intersect[False] [gw9] [ 94%] PASSED tests/test_unary.py::test_getitem [gw4] [ 95%] PASSED tests/test_binary.py::test_k_nearest[upstream-False-False-last] tests/test_binary.py::test_k_nearest[upstream-True-opposite-last] [gw1] [ 95%] PASSED tests/test_binary.py::test_subtraction[False] tests/test_binary.py::test_nearest[None-True-False] [gw3] [ 95%] PASSED tests/test_binary.py::test_k_nearest[downstream-False-opposite-last] tests/test_binary.py::test_k_nearest[downstream-False-same-last] [gw8] [ 95%] PASSED tests/test_unary.py::test_merge[False] tests/windows/test_windows.py::test_windows2 [gw8] [ 95%] PASSED tests/windows/test_windows.py::test_windows2 [gw11] [ 96%] PASSED tests/test_unary.py::test_windows [gw2] [ 96%] PASSED tests/test_binary.py::test_nearest[downstream-True-False] tests/test_binary.py::test_nearest[downstream-True-same] [gw0] [ 96%] PASSED tests/test_binary.py::test_intersect[False] tests/test_binary.py::test_intersect[same] [gw6] [ 96%] PASSED tests/test_unary.py::test_cluster[False] [gw4] [ 96%] PASSED tests/test_binary.py::test_k_nearest[upstream-True-opposite-last] tests/test_binary.py::test_k_nearest[upstream-True-same-last] [gw3] [ 96%] PASSED tests/test_binary.py::test_k_nearest[downstream-False-same-last] tests/test_binary.py::test_k_nearest[downstream-False-False-last] [gw1] [ 97%] PASSED tests/test_binary.py::test_nearest[None-True-False] tests/test_binary.py::test_nearest[None-True-same] [gw0] [ 97%] PASSED tests/test_binary.py::test_intersect[same] tests/test_binary.py::test_intersect[opposite] [gw10] [ 97%] PASSED tests/test_unary.py::test_cluster_by[False] [gw2] [ 97%] PASSED tests/test_binary.py::test_nearest[downstream-True-same] tests/test_binary.py::test_nearest[downstream-True-opposite] [gw0] [ 97%] PASSED tests/test_binary.py::test_intersect[opposite] [gw1] [ 98%] PASSED tests/test_binary.py::test_nearest[None-True-same] tests/test_binary.py::test_nearest[None-True-opposite] [gw3] [ 98%] PASSED tests/test_binary.py::test_k_nearest[downstream-False-False-last] [gw2] [ 98%] PASSED tests/test_binary.py::test_nearest[downstream-True-opposite] tests/test_binary.py::test_nearest[downstream-False-False] [gw4] [ 98%] PASSED tests/test_binary.py::test_k_nearest[upstream-True-same-last] tests/test_binary.py::test_k_nearest[upstream-True-False-last] [gw1] [ 98%] PASSED tests/test_binary.py::test_nearest[None-True-opposite] tests/test_binary.py::test_nearest[None-False-False] [gw2] [ 99%] PASSED tests/test_binary.py::test_nearest[downstream-False-False] [gw4] [ 99%] PASSED tests/test_binary.py::test_k_nearest[upstream-True-False-last] tests/test_binary.py::test_k_nearest[None-False-opposite-last] [gw1] [ 99%] PASSED tests/test_binary.py::test_nearest[None-False-False] tests/test_binary.py::test_nearest[None-False-same] [gw4] [ 99%] PASSED tests/test_binary.py::test_k_nearest[None-False-opposite-last] tests/test_binary.py::test_k_nearest[None-False-same-last] [gw1] [ 99%] PASSED tests/test_binary.py::test_nearest[None-False-same] [gw4] [100%] PASSED tests/test_binary.py::test_k_nearest[None-False-same-last] =============================== warnings summary =============================== tests/conftest.py:83 /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/conftest.py:83: SyntaxWarning: invalid escape sequence '\s' sep="\s+", pyranges/__init__.py:18: 13 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/__init__.py:18: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources tests/test_binary.py:118: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:118: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:139: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:139: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:160: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:160: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:187: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:187: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:212: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:212: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:291: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:291: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:329: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:329: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:368: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:368: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:392: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:392: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:426: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:426: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:516: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:516: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_binary.py:579: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py:579: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) pyranges/methods/init.py:60: 60 warnings .pybuild/cpython3_3.13_pyranges/build/tests/data/test_data.py: 9 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py: 160484 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py: 160295 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_getset_attr.py: 3 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_io.py: 4 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_pickle.py: 1 warning .pybuild/cpython3_3.13_pyranges/build/tests/test_stranded.py: 6 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py: 358 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 23619 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_change_chromosome_custom.py: 2 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_concat.py: 8 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_count_overlaps.py: 1 warning .pybuild/cpython3_3.13_pyranges/build/tests/windows/test_windows.py: 2 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/methods/init.py:60: FutureWarning: The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning. return {k: v for k, v in df.groupby(grpby_key)} pyranges/methods/init.py:189: 48 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py: 3674 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py: 2000 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_stranded.py: 2 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_change_chromosome_custom.py: 1 warning .pybuild/cpython3_3.13_pyranges/build/tests/test_concat.py: 7 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 6139 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/methods/init.py:189: FutureWarning: The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning. empty_removed = df.groupby("Chromosome") tests/test_do_not_error.py:46: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py:46: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:35: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:35: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:100: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:100: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:163: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:163: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:205: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:205: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:234: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:234: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:272: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:272: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) tests/test_unary.py:287: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:287: HypothesisDeprecationWarning: The return_value health check is deprecated, because this is always an error. @settings( tests/test_unary.py:315: 12 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:315: HypothesisDeprecationWarning: `HealthCheck.all()` is deprecated; use `list(HealthCheck)` instead. The `hypothesis codemod` command-line tool can automatically refactor your code to fix this warning. suppress_health_check=HealthCheck.all()) .pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py: 7165 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_binary.py: 15637 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 18014 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/tostring2.py:31: FutureWarning: The behavior of DataFrame concatenation with empty or all-NA entries is deprecated. In a future version, this will no longer exclude empty or all-NA columns when determining the result dtypes. To retain the old behavior, exclude the relevant entries before the concat operation. df = pd.concat([plus, minus]) .pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py: 2616 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_stranded.py: 2 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py: 119 warnings .pybuild/cpython3_3.13_pyranges/build/tests/test_concat.py: 1 warning .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 5139 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/methods/init.py:187: FutureWarning: The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning. empty_removed = df.groupby(["Chromosome", "Strand"]) .pybuild/cpython3_3.13_pyranges/build/tests/test_do_not_error.py: 1295 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/pyranges.py:3779: FutureWarning: The behavior of Series.replace (and DataFrame.replace) with CategoricalDtype is deprecated. In a future version, replace will only be used for cases that preserve the categories. To change the categories, use ser.cat.rename_categories instead. other.Strand = other.Strand.replace({"+": "-", "-": "+"}) .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1217804. 1221351. 1223357. 1223968. 1227319. 1228946. 1232031.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000078808.16' 'ENSG00000078808.16' 'ENSG00000078808.16' 'ENSG00000078808.16' 'ENSG00000078808.16' 'ENSG00000078808.16']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1336515. 1337055. 1338183. 1338436. 1338653. 1339812. 1340190. 1340365. 1340503. 1342156. 1342484. 1342758. 1349350.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19' 'ENSG00000107404.19']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1311924. 1312147. 1313592. 1315697. 1317450. 1321096. 1321984. 1323287. 1324691.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20' 'ENSG00000127054.20']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1293708. 1293933. 1294199. 1294628. 1295008. 1295554. 1295938. 1296109. 1296280. 1296633. 1297933. 1298265. 1298421. 1299905. 1300068. 1300202. 1300692. 1302046. 1302975. 1305929. 1307156. 1307383. 1308018. 1309609.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18' 'ENSG00000131584.18']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1084506. 1085310. 1086012. 1087636. 1092294. 1092813. 1106127. 1106871. 1115075. 1116361.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17' 'ENSG00000131591.17']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1472089. 1477350. 1478745. 1479108. 1480936. 1482303. 1482662. 1485171. 1486235. 1486668. 1487914. 1490671. 1497848.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19' 'ENSG00000160072.19']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1255487. 1256335. 1257130. 1257310. 1262390. 1263569. 1264830. 1266290. 1267992. 1271637. 1273885.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20' 'ENSG00000160087.20']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1173926. 1174321. 1174489. 1175034. 1179333. 1179853. 1180340. 1180884. 1181815. 1182446. 1183047. 1184091. 1185864. 1196488. 1196716. 1197186. 1197935.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13' 'ENSG00000162571.13']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1281610. 1282010. 1282319. 1284090. 1285664. 1286278. 1286975. 1287299. 1287836. 1288037. 1290388. 1290555. 1290694. 1290953. 1291140. 1292029.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20' 'ENSG00000162572.20']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1353946. 1354106. 1354509. 1355752. 1356704. 1358794. 1361777.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000162576.16' 'ENSG00000162576.16' 'ENSG00000162576.16' 'ENSG00000162576.16' 'ENSG00000162576.16' 'ENSG00000162576.16']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1331536. 1331938. 1332806. 1333124. 1333379. 1335306.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000169962.4' 'ENSG00000169962.4' 'ENSG00000169962.4' 'ENSG00000169962.4' 'ENSG00000169962.4']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1308720. 1308972. 1309851. 1311071. 1311677.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000169972.11' 'ENSG00000169972.11' 'ENSG00000169972.11' 'ENSG00000169972.11']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1373902. 1375495.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000175756.13']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1235041.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 818202. 819837.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000177757.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1435146. 1435821. 1437484. 1442882.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000179403.11' 'ENSG00000179403.11' 'ENSG00000179403.11']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1242646. 1243552. 1244275. 1244724. 1246722.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000184163.3' 'ENSG00000184163.3' 'ENSG00000184163.3' 'ENSG00000184163.3']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 65433. 65573. 71585.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000186092.6' 'ENSG00000186092.6']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1211832. 1212138. 1212704. 1213785. 1214138.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000186827.10' 'ENSG00000186827.10' 'ENSG00000186827.10' 'ENSG00000186827.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1203968. 1204236. 1204486. 1205680. 1206691.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000186891.13' 'ENSG00000186891.13' 'ENSG00000186891.13' 'ENSG00000186891.13']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 966614. 966803. 970423. 970601. 971006. 971208. 971523. 972150. 972424. 973010. 973326. 973640. 974051. 974364. 975108. 975865.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10' 'ENSG00000187583.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1001281. 1008279. 1013576. 1014540.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000187608.9' 'ENSG00000187608.9' 'ENSG00000187608.9']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 924948. 925189. 925800. 926013. 930336. 931089. 935896. 939129. 939460. 940462. 941306. 943058. 943377. 944581.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11' 'ENSG00000187634.11']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 976269. 976641. 981029. 981173. 982093.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000187642.9' 'ENSG00000187642.9' 'ENSG00000187642.9' 'ENSG00000187642.9']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 960800. 961750. 962478. 962917. 963253. 963504. 964008. 964180. 964530. 965715.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13' 'ENSG00000187961.13']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1020373. 1022462. 1034703. 1035324. 1040880. 1041397. 1041702. 1042162. 1043457. 1043732. 1044023. 1044257. 1044439. 1045277. 1045523. 1045876. 1046088. 1046349. 1046735. 1046957. 1047454. 1047687. 1047895. 1048365. 1049059. 1049451. 1049795. 1050037. 1050329. 1050591. 1050837. 1051043. 1051369. 1051645. 1051815. 1053977. 1054551. 1056118.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14' 'ENSG00000188157.14']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 999432. 1000172.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000188290.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 944800. 945146. 945422. 945653. 946286. 947060. 948232. 948603. 951238. 952139. 952600. 953288. 953892. 954523. 956013. 956215. 957025. 959081. 959309.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10' 'ENSG00000188976.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1512473. 1516088. 1517412. 1517775. 1518990. 1520306. 1520617.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000197785.13' 'ENSG00000197785.13' 'ENSG00000197785.13' 'ENSG00000197785.13' 'ENSG00000197785.13' 'ENSG00000197785.13' 'ENSG00000197785.13']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 634922.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1169087.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1426385. 1427787.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000205116.3']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1176396. 1179555.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000205231.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1167952.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1167198.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1450758. 1452122. 1452434. 1454500. 1455519. 1455916. 1456349. 1457180. 1459231. 1460917. 1462708. 1470158.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9' 'ENSG00000215915.9']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1059846. 1060393. 1061117. 1063201. 1063566. 1064401. 1064589. 1065475. 1066456. 1066667. 1067646. 1068003. 1068724. 1069355.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9' 'ENSG00000217801.9']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1387582. 1387869. 1388743. 1388830. 1389047. 1389473. 1390371. 1390563. 1392803. 1393460. 1395537. 1398366. 1398956. 1399328.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11' 'ENSG00000221978.11']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 157887.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 758336.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1379032.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 921016.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1137110. 1141032. 1144056.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000223823.1' 'ENSG00000223823.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 12227. 12721. 13052. 14409.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000223972.5' 'ENSG00000223972.5' 'ENSG00000223972.5']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1325102. 1325595. 1327032. 1328897.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000224051.6' 'ENSG00000224051.6' 'ENSG00000224051.6']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1402046.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1012190. 1013193.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000224969.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1430954. 1431843. 1434573.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000225285.1' 'ENSG00000225285.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 630683.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 827522.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1420564. 1422691.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000225905.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 629433.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 14501. 15038. 15947. 16765. 17055. 17368. 17742. 18061. 18366. 24891. 29570.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5' 'ENSG00000227232.5']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 729804. 733364. 735613. 743350. 744391. 744825. 746818. 756141. 759123. 765247. 766387. 768613. 769712. 773107. 774280. 778626.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3' 'ENSG00000228327.3']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 259025. 261634. 268204. 268816. 289370. 297502. 357586. 358183. 359681.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10' 'ENSG00000228463.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 825552. 826923. 827775. 827853. 829104. 831677. 842020. 847806. 849602. 850351. 852515. 852766. 859446.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8' 'ENSG00000228794.8']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 633438.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 724360. 724903.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000229376.3']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 761154. 761989.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000229905.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 586358. 586955. 588453. 594756. 598551. 601577. 608056. 612864. 627823. 628223. 629006. 631204. 633129. 698959. 702340. 703789. 711922. 720206. 724564. 732212. 733064. 827796.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10' 'ENSG00000230021.10']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 801163. 805891. 808623. 810170. 817712.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000230092.7' 'ENSG00000230092.7' 'ENSG00000230092.7' 'ENSG00000230092.7']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 868675. 869575. 870201. 875155. 876903.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000230368.2' 'ENSG00000230368.2' 'ENSG00000230368.2' 'ENSG00000230368.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1275299. 1279393. 1280420.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000230415.1' 'ENSG00000230415.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 911473. 914948.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000230699.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1008229.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 489387. 489906.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000233653.3']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 134836.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 874349.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1419549. 1420592. 1421769.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000235098.8' 'ENSG00000235098.8']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 587729. 594768.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000235146.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 358957. 360168. 366052.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000236601.2' 'ENSG00000236601.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 348366.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 365692. 366151. 368450. 373323. 379972. 476945. 485208. 489553. 494898. 495049. 495476. 496605. 497299. 498305. 499369. 501620. 502243. 502955. 505103. 514423. 517266. 522928.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12' 'ENSG00000237094.12']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1072575. 1074307.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000237330.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 779092. 782191. 783363. 784977. 787672. 793041. 795582. 801876. 803667. 804222. 805270. 806459. 807465. 810060.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8' 'ENSG00000237491.8']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 35174. 35481. 36081.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000237613.2' 'ENSG00000237613.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 632616.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 91629. 92240. 111357. 112804. 120932. 129223. 133723.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000238009.6' 'ENSG00000238009.6' 'ENSG00000238009.6' 'ENSG00000238009.6' 'ENSG00000238009.6' 'ENSG00000238009.6']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 139847. 140339.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000239906.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 90050. 91105.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000239945.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 57653. 58856. 64116.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000240361.2' 'ENSG00000240361.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 633741.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1317899. 1318689.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000240731.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 914444. 914971.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000241180.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 160690. 161525.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000241599.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 143011. 149707. 155831. 164791. 165942. 168165. 168767. 169264. 172688. 173862.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6' 'ENSG00000241860.6']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1402601. 1407019. 1407313.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000242485.5' 'ENSG00000242485.5']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1055215. 1056116.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000242590.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 30039. 30667. 31109.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000243485.5' 'ENSG00000243485.5']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 634376.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 491989. 493241.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000250575.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1251334.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1405752.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 53312.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 675265.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 135895.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 440232.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 137965.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1170343.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 904957. 915976.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000272438.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1410618.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 998051.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1062808. 1063288.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000273443.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 187958.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1296170.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 17436.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 516479.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 632413.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 185350. 185559. 186469. 187287. 187577. 187890. 188266. 188584. 188902. 195411.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4' 'ENSG00000279457.4']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 182746. 183216. 183571. 183901. 184174.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000279928.2' 'ENSG00000279928.2' 'ENSG00000279928.2' 'ENSG00000279928.2']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 874591. 875155. 875625. 876611. 877234.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000283040.1' 'ENSG00000283040.1' 'ENSG00000283040.1' 'ENSG00000283040.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1312566.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 30503.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1339708.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 686673.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 451697.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1503661. 1509452.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000284740.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 782050.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py:37: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[ nan 1098113. 1104598.]' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. x.loc[:, "Start"] = x.Start.shift() .pybuild/cpython3_3.13_pyranges/build/tests/test_genomicfeatures.py::test_introns_single /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/genomicfeatures.py:600: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['ENSG00000285812.1']' has dtype incompatible with int32, please explicitly cast to a compatible dtype first. introns.loc[:, "by_id"] = original_ids[id_column].values .pybuild/cpython3_3.13_pyranges/build/tests/test_concat.py::test_concat_stranded_unstranded /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/methods/concat.py:47: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['+', '+', '-', NaN, NaN] Categories (3, object): ['+', '-', '.']' has dtype incompatible with category, please explicitly cast to a compatible dtype first. v.loc[:, "Strand"] = type_v.cat.add_categories(["."]) .pybuild/cpython3_3.13_pyranges/build/tests/test_concat.py::test_concat_unstranded_stranded /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/pyranges/methods/concat.py:47: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[NaN, NaN, NaN, '+', '-'] Categories (3, object): ['+', '-', '.']' has dtype incompatible with category, please explicitly cast to a compatible dtype first. v.loc[:, "Strand"] = type_v.cat.add_categories(["."]) .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 2000 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:153: FutureWarning: A value is trying to be set on a copy of a DataFrame or Series through chained assignment using an inplace method. The behavior will change in pandas 3.0. This inplace method will never work because the intermediate object on which we are setting values always behaves as a copy. For example, when doing 'df[col].method(value, inplace=True)', try using 'df.method({col: value}, inplace=True)' or df[col] = df[col].method(value) instead, to perform the operation inplace on the original object. result_df.Cluster.replace(cluster_ids, inplace=True) .pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py: 2000 warnings /build/reproducible-path/pyranges-0.0.111+ds/.pybuild/cpython3_3.13_pyranges/build/tests/test_unary.py:178: FutureWarning: The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning. for _, gdf in natsorted(df.groupby(groupby)): -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============== 531 passed, 411175 warnings in 2184.43s (0:36:24) =============== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-pyranges/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/pyranges-0.0.111+ds/debian/python3-pyranges /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3.13/dist-packages/tests/conftest.py:83: SyntaxWarning: invalid escape sequence '\s' debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/pyranges-0.0.111+ds' find debian/ -name *.bam* | xargs rm -rf find debian/ -name 'hi' | xargs rm -rf find debian/ -name '.hypothesis' | xargs rm -rf make[1]: Leaving directory '/build/reproducible-path/pyranges-0.0.111+ds' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-pyranges' in '../python3-pyranges_0.0.111+ds-8_all.deb'. dpkg-genbuildinfo --build=binary -O../pyranges_0.0.111+ds-8_arm64.buildinfo dpkg-genchanges --build=binary -O../pyranges_0.0.111+ds-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from pyranges-0.0.111+ds/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/169045 and its subdirectories I: Current time: Sun Mar 9 01:38:33 -12 2025 I: pbuilder-time-stamp: 1741527513 Sun Mar 9 13:38:35 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sun Mar 9 13:38:35 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sun Mar 9 14:23:06 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sun Mar 9 14:23:07 UTC 2025 I: pyranges_0.0.111+ds-8_arm64.changes: Format: 1.8 Date: Sat, 21 Sep 2024 10:53:29 +0200 Source: pyranges Binary: python3-pyranges Architecture: all Version: 0.0.111+ds-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: python3-pyranges - 2D representation of genomic intervals and their annotations Closes: 1082494 Changes: pyranges (0.0.111+ds-8) unstable; urgency=medium . [ Johannes Schauer Marin Rodrigues ] * d/rules: fix build ignoring requested number of parallel processes. (Closes: #1082494) . [ Étienne Mollier ] * d/control: declare compliance to standards version 4.7.0. Checksums-Sha1: 815e6bee930026a1086e62fc3d4a1f60007b5352 7190 pyranges_0.0.111+ds-8_arm64.buildinfo 9d42d71bc845eec2497898f09ec0b745426428a8 438332 python3-pyranges_0.0.111+ds-8_all.deb Checksums-Sha256: 1da6cc05f10e1291c6f71f952223d6dbf20fff691b23f08e36bbbfae6aa6760f 7190 pyranges_0.0.111+ds-8_arm64.buildinfo cbd26138852c34b751460b976860a8ef65a727bbcb66b6a64aafd62ab3a47511 438332 python3-pyranges_0.0.111+ds-8_all.deb Files: 081708f3d38925d24f0566c240f21e82 7190 python optional pyranges_0.0.111+ds-8_arm64.buildinfo abcc7ec378c936a46138a38c81bdd55d 438332 python optional python3-pyranges_0.0.111+ds-8_all.deb Sun Mar 9 14:23:08 UTC 2025 I: diffoscope 289 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_10-60708.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/pyranges_0.0.111+ds-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/pyranges_0.0.111+ds-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/pyranges_0.0.111+ds-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/b1/pyranges_0.0.111+ds-8_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.244tsubN/b2/pyranges_0.0.111+ds-8_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 243ms CPU time consumed: 243ms Sun Mar 9 14:23:08 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists. Sun Mar 9 14:23:08 UTC 2025 I: pyranges from trixie built successfully and reproducibly on arm64. Sun Mar 9 14:23:09 UTC 2025 I: Submitting .buildinfo files to external archives: Sun Mar 9 14:23:09 UTC 2025 I: Submitting 8.0K b1/pyranges_0.0.111+ds-8_arm64.buildinfo.asc Sun Mar 9 14:23:10 UTC 2025 I: Submitting 8.0K b2/pyranges_0.0.111+ds-8_arm64.buildinfo.asc Sun Mar 9 14:23:11 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Mar 9 14:23:11 UTC 2025 I: Done submitting .buildinfo files. Sun Mar 9 14:23:11 UTC 2025 I: Removing signed pyranges_0.0.111+ds-8_arm64.buildinfo.asc files: removed './b1/pyranges_0.0.111+ds-8_arm64.buildinfo.asc' removed './b2/pyranges_0.0.111+ds-8_arm64.buildinfo.asc'