Thu Jan 16 15:21:09 UTC 2025 I: starting to build cassiopee/trixie/armhf on jenkins on '2025-01-16 15:20' Thu Jan 16 15:21:09 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_25/12877/console.log Thu Jan 16 15:21:09 UTC 2025 I: Downloading source for trixie/cassiopee=1.0.9-4 --2025-01-16 15:21:09-- http://deb.debian.org/debian/pool/main/c/cassiopee/cassiopee_1.0.9-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2373 (2.3K) [text/prs.lines.tag] Saving to: ‘cassiopee_1.0.9-4.dsc’ 0K .. 100% 400M=0s 2025-01-16 15:21:09 (400 MB/s) - ‘cassiopee_1.0.9-4.dsc’ saved [2373/2373] Thu Jan 16 15:21:09 UTC 2025 I: cassiopee_1.0.9-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cassiopee Binary: cassiopee, libcassie-doc, libcassie1v5, libcassie-dev Architecture: any all Version: 1.0.9-4 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou Homepage: https://github.com/osallou/cassiopee-c Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/cassiopee Vcs-Git: https://salsa.debian.org/med-team/cassiopee.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev Package-List: cassiopee deb science optional arch=any libcassie-dev deb libdevel optional arch=any libcassie-doc deb doc optional arch=all libcassie1v5 deb libs optional arch=any Checksums-Sha1: a25a0e8173ad9c5f91427f8235414ee9063d343a 60576 cassiopee_1.0.9.orig.tar.gz 788742371d6720dbb55744190dfac609174969b1 5064 cassiopee_1.0.9-4.debian.tar.xz Checksums-Sha256: f02d72bbc18e858af68fb0a25d2e5d00b52d3ab5ef33d2e6731d8ff3d8bce35a 60576 cassiopee_1.0.9.orig.tar.gz f91556d7d610caa52f2c79703a528e40f47169f086849fd971859eef67c05460 5064 cassiopee_1.0.9-4.debian.tar.xz Files: 4fc0d2239a849e8075e2941210455bec 60576 cassiopee_1.0.9.orig.tar.gz c426bd10014f9753db9be7211feb916c 5064 cassiopee_1.0.9-4.debian.tar.xz Dgit: 2a53a1a0bd35877cf5f23429fe18c5e34db10036 debian archive/debian/1.0.9-4 https://git.dgit.debian.org/cassiopee -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmWALicUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoE2w/+Pd3wWjPJ5RpGgk2K2xlqmQhbCZA6 r4W5iRwKZR0dMO8emtrdEdvnwgZiTjIYUt33WlTY1l/jw2qWKdPTDTcy0s4A2qug xy1nfvtOz6dN4eeO8PulhCbxLFNBXceMNFj/ozFhS9mFg+UixxbEIuaZ1iuWoWH2 0bRqT/FdmbNevQiKrttpKR1yqD4D3SnrktsQzdN01jfbGWAFRK8jbo2ZSW1jY5PQ CwZY0bofxtgPnyALd/hyZY6EGbf5hZ6/wvtyGuNWzmdwrkR0heO+uoQW/L0NQ2iB qGsUyOfX3bGPTldWX7jjlY3oXUF7d1HLAieJT/h5Xpyj+q8zBgJg6pKT1QR/8CDD 1oy4b0CvGnepzemHAkUW2OQtUZd+gVMi9/HmCxOdOG1B7QH7cb4ZCwvk3G3mID75 JfV5oHmY34egmeciKuMAKZyaVFQIRzuDOpMKMLxVGBwqbXhS61j9CpAJSVqcke4V gnaNTFBJH8vdkQJ8FFEfjcN2XlC/hfp5kArqrcJJGHp4qo9oly60YG9jrZlO84Zy LXbUlBlFTnEvl2wyMv1H1b7wBZenIkrRpa+vxU2nOa3/qeSiP1U3bBOFfmWhYYyC e5wVxpgVu6YumOMVPi9Dvw74L7QHNBkEBh4i8iq7fmUJiEQkbEiFEXT9a8tllsLc IgPToZlCKYFerds= =nntK -----END PGP SIGNATURE----- Thu Jan 16 15:21:09 UTC 2025 I: Checking whether the package is not for us Thu Jan 16 15:21:09 UTC 2025 I: Starting 1st build on remote node virt32c-armhf-rb.debian.net. Thu Jan 16 15:21:09 UTC 2025 I: Preparing to do remote build '1' on virt32c-armhf-rb.debian.net. Thu Jan 16 15:24:34 UTC 2025 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 16 03:21:15 -12 2025 I: pbuilder-time-stamp: 1737040875 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cassiopee_1.0.9-4.dsc] I: copying [./cassiopee_1.0.9.orig.tar.gz] I: copying [./cassiopee_1.0.9-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./cassiopee_1.0.9-4.dsc: unsupported subcommand dpkg-source: info: extracting cassiopee in cassiopee-1.0.9 dpkg-source: info: unpacking cassiopee_1.0.9.orig.tar.gz dpkg-source: info: unpacking cassiopee_1.0.9-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/17641/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='4c44a0477f0c4d4daf6e4067c6ba7858' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='17641' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/pbuilderrc_RkHo --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/b1 --logfile b1/build.log cassiopee_1.0.9-4.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32c 6.1.0-30-armmp-lpae #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/17641/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19566 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libgoogle-glog-dev; however: Package libgoogle-glog-dev is not installed. pbuilder-satisfydepends-dummy depends on libcppunit-dev; however: Package libcppunit-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libcppunit-1.15-0{a} libcppunit-dev{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libgflags-dev{a} libgflags2.2{a} libgnutls30t64{a} libgoogle-glog-dev{a} libgoogle-glog0v6t64{a} libgssapi-krb5-2{a} libicu-dev{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 110 MB of archives. After unpacking 585 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-4 [196 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-13 [84.7 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-4 [723 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.31.3-1 [2268 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.2-1 [23.3 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 27 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libidn2-0 armhf 2.3.7-2+b1 [125 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libffi8 armhf 3.4.6-1 [20.0 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libtasn1-6 armhf 4.19.0-3+b3 [43.9 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libgnutls30t64 armhf 3.8.8-2 [1370 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.19+dfsg-1 [163 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libcurl4t64 armhf 8.11.1-1 [303 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libuv1t64 armhf 1.48.0-7 [134 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.31.3-1 [5899 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.23 [90.6 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libtool all 2.5.4-2 [539 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-4 [1489 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf debhelper all 13.23 [919 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libedit2 armhf 3.1-20240808-1 [77.9 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libz3-4 armhf 4.13.3-1 [7252 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libllvm19 armhf 1:19.1.6-1+b1 [23.8 MB] Get: 63 http://deb.debian.org/debian trixie/main armhf libclang-cpp19 armhf 1:19.1.6-1+b1 [11.6 MB] Get: 64 http://deb.debian.org/debian trixie/main armhf libclang1-19 armhf 1:19.1.6-1+b1 [6611 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libfmt10 armhf 10.1.1+ds1-4 [118 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf doxygen armhf 1.9.8+ds-2+b3 [4499 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf icu-devtools armhf 72.1-6 [189 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libboost1.83-dev armhf 1.83.0-4 [10.6 MB] Get: 69 http://deb.debian.org/debian trixie/main armhf libboost-regex1.83.0 armhf 1.83.0-4 [308 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libicu-dev armhf 72.1-6 [10.1 MB] Get: 71 http://deb.debian.org/debian trixie/main armhf libboost-regex1.83-dev armhf 1.83.0-4 [337 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libboost-iostreams1.83-dev armhf 1.83.0-4 [261 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libboost-iostreams-dev armhf 1.83.0.2+b2 [3568 B] Get: 74 http://deb.debian.org/debian trixie/main armhf libboost-serialization1.83.0 armhf 1.83.0-4 [317 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libboost-serialization1.83-dev armhf 1.83.0-4 [385 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libboost-serialization-dev armhf 1.83.0.2+b2 [3816 B] Get: 77 http://deb.debian.org/debian trixie/main armhf libcppunit-1.15-0 armhf 1.15.1-4+b2 [137 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libcppunit-dev armhf 1.15.1-4+b2 [199 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libgflags2.2 armhf 2.2.2-2 [66.4 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libgflags-dev armhf 2.2.2-2 [88.6 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf libgoogle-glog0v6t64 armhf 0.6.0-2.1 [56.2 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf libgoogle-glog-dev armhf 0.6.0-2.1 [94.1 kB] Fetched 110 MB in 4s (29.4 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19566 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cassiopee-1.0.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cassiopee_1.0.9-4_source.changes dpkg-buildpackage: info: source package cassiopee dpkg-buildpackage: info: source version 1.0.9-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at CMakeLists.txt:3 (enable_language): project() should be called prior to this enable_language() call. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:29 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") found components: iostreams serialization -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Configuring done (6.7s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf dh_auto_build cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/depend cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles/doc.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassie.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/build [ 11%] Generating API documentation with Doxygen cd /build/reproducible-path/cassiopee-1.0.9 && /usr/bin/doxygen /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' warning: Tag 'TCL_SUBST' at line 203 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SYMBOL_CACHE_SIZE' at line 327 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 547 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 839 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 935 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 941 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'USE_INLINE_TREES' at line 1132 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. 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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" [ 22%] Building CXX object src/CMakeFiles/cassie.dir/cassiopee.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -Dcassie_EXPORTS -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT src/CMakeFiles/cassie.dir/cassiopee.cxx.o -MF CMakeFiles/cassie.dir/cassiopee.cxx.o.d -o CMakeFiles/cassie.dir/cassiopee.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:324: warning: Compound per_position is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:223: warning: Member seq_length (variable) of class CassieIndexer is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:353: warning: Member morphisms (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:424: warning: Member pattern_length (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: argument 'array' of command @param is not found in the argument list of CassieSearch::search(string suffixes[]) /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: The following parameter of CassieSearch::search(string suffixes[]) is not documented: parameter 'suffixes' /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:49: warning: Member pos (variable) of class Match is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:326: warning: Member operator()(const Match *struct1, const Match *struct2) (function) of struct per_position is not documented. Doxygen version used: 1.9.8 Notice: Output directory 'doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/cassiopee-1.0.9/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file src/Cassiopee.h... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound Ambiguous... Generating docs for compound CassieIndexer... Generating docs for compound CassieSearch... Generating docs for compound CassiopeeUtils... Generating docs for compound Match... Generating docs for compound per_position... Generating docs for compound TreeNode... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 145/65536 hits=236 misses=150 symbol lookup cache used 125/65536 hits=429 misses=125 finished... make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 22%] Built target doc [ 33%] Linking CXX shared library ../lib/libcassie.so cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassie.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,--dependency-file=CMakeFiles/cassie.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libcassie.so.1 -o ../lib/libcassie.so.1.0.0 CMakeFiles/cassie.dir/cassiopee.cxx.o -L/usr/local/lib -Wl,-rpath,/usr/local/lib: -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libcassie.so.1.0.0 ../lib/libcassie.so.1 ../lib/libcassie.so make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 33%] Built target cassie make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassiopee.dir/DependInfo.cmake "--color=" make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassiopeeknife.dir/DependInfo.cmake "--color=" make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/test /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test/CMakeFiles/test_cassiopee.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/build make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/build make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 44%] Building CXX object src/CMakeFiles/cassiopee.dir/cassie.cxx.o [ 55%] Building CXX object src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopee.dir/cassie.cxx.o -MF CMakeFiles/cassiopee.dir/cassie.cxx.o.d -o CMakeFiles/cassiopee.dir/cassie.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx [ 66%] Building CXX object test/CMakeFiles/test_cassiopee.dir/test.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o -MF CMakeFiles/cassiopeeknife.dir/knife.cxx.o.d -o CMakeFiles/cassiopeeknife.dir/knife.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -I/build/reproducible-path/cassiopee-1.0.9/test/src -I/build/reproducible-path/cassiopee-1.0.9/src -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT test/CMakeFiles/test_cassiopee.dir/test.cxx.o -MF CMakeFiles/test_cassiopee.dir/test.cxx.o.d -o CMakeFiles/test_cassiopee.dir/test.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/test/test.cxx [ 77%] Linking CXX executable ../bin/cassiopeeknife cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopeeknife.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/cassiopeeknife.dir/link.d CMakeFiles/cassiopeeknife.dir/knife.cxx.o -o ../bin/cassiopeeknife -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 77%] Built target cassiopeeknife [ 88%] Linking CXX executable ../bin/cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/cassiopee.dir/link.d CMakeFiles/cassiopee.dir/cassie.cxx.o -o ../bin/cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 88%] Built target cassiopee [100%] Linking CXX executable ../bin/test_cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/test_cassiopee.dir/link.d CMakeFiles/test_cassiopee.dir/test.cxx.o -o ../bin/test_cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib ../lib/libcassie.so.1.0.0 -lglog -lcppunit /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [100%] Built target test_cassiopee make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' dh_auto_test cd obj-arm-linux-gnueabihf && make -j3 test ARGS\+=--verbose ARGS\+=-j3 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j3 UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/DartConfiguration.tcl Test project /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: TestCassie 1: Test command: /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/test_cassiopee 1: Working Directory: /build/reproducible-path/cassiopee-1.0.9 1: Test timeout computed to be: 10000000 1: WARNING: Logging before InitGoogleLogging() is written to STDERR 1: I20250116 15:24:01.395988 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.396131 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.405112 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.405180 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.405455 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.405481 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.406023 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.406049 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.406342 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.406364 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.408203 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.408252 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.410035 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.410063 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.410544 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.410567 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.415189 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.415256 23290 cassiopee.cxx:651] Indexing test/protein.txt 1: I20250116 15:24:01.419152 23290 cassiopee.cxx:632] Existing index for max depth = 0 1: I20250116 15:24:01.419206 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.421793 23290 cassiopee.cxx:693] Maximum index depth: 75 1: I20250116 15:24:01.439745 23290 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250116 15:24:01.439834 23290 cassiopee.cxx:638] Index file exists, loading it 1: I20250116 15:24:01.451148 23290 cassiopee.cxx:743] Loaded 2504 nodes 1: I20250116 15:24:01.452463 23290 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250116 15:24:01.452507 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20250116 15:24:01.454770 23290 cassiopee.cxx:693] Maximum index depth: 75 1: I20250116 15:24:01.464344 23290 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250116 15:24:01.464425 23290 cassiopee.cxx:638] Index file exists, loading it 1: I20250116 15:24:01.475536 23290 cassiopee.cxx:743] Loaded 2504 nodes 1: I20250116 15:24:01.476584 23290 cassiopee.cxx:632] Existing index for max depth = 75 1: I20250116 15:24:01.476619 23290 cassiopee.cxx:651] Indexing test/sequence.txt 1: OK (13) 1/1 Test #1: TestCassie ....................... Passed 0.11 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.11 sec make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/cassiopee-1.0.9/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/CassiopeeConfig.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0 -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/Cassiopee.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree.hh -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree_util.hh make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9' rm -f doc/html/jquery.js dh_install make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libcassie1v5/usr/lib/libcassie.so.1.0.0 found in none of the libraries dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libcassie-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'cassiopee' in '../cassiopee_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie1v5-dbgsym' in '../libcassie1v5-dbgsym_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie-doc' in '../libcassie-doc_1.0.9-4_all.deb'. dpkg-deb: building package 'cassiopee-dbgsym' in '../cassiopee-dbgsym_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie1v5' in '../libcassie1v5_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie-dev' in '../libcassie-dev_1.0.9-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../cassiopee_1.0.9-4_armhf.buildinfo dpkg-genchanges --build=binary -O../cassiopee_1.0.9-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/17641 and its subdirectories I: Current time: Thu Jan 16 03:24:25 -12 2025 I: pbuilder-time-stamp: 1737041065 Thu Jan 16 15:24:36 UTC 2025 I: 1st build successful. Starting 2nd build on remote node virt64z-armhf-rb.debian.net. Thu Jan 16 15:24:36 UTC 2025 I: Preparing to do remote build '2' on virt64z-armhf-rb.debian.net. Thu Jan 16 15:26:24 UTC 2025 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. Thu Jan 16 15:26:26 UTC 2025 I: cassiopee_1.0.9-4_armhf.changes: Format: 1.8 Date: Mon, 18 Dec 2023 12:23:03 +0100 Source: cassiopee Binary: cassiopee cassiopee-dbgsym libcassie-dev libcassie-doc libcassie1v5 libcassie1v5-dbgsym Architecture: armhf all Version: 1.0.9-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1v5 - library implementating search algorithms Closes: 1043792 Changes: cassiopee (1.0.9-4) unstable; urgency=medium . * Team upload. * d/control: declare compliance to standards version 4.6.2. * d/control: mark libcassie-doc Multi-Arch foreign. * d/clean: new: cleanup doc and test artifacts. (Closes: #1043792) * d/rules: remove clean override: deferred to d/clean. Checksums-Sha1: 1842c83095316e20c16caff2a35d8de48d5d7c43 136628 cassiopee-dbgsym_1.0.9-4_armhf.deb b58a9bbea6dedef451229655344d1beb87bb6dd7 7819 cassiopee_1.0.9-4_armhf.buildinfo 6f67b90078cd456c5017e62b64ffa749a7bfaa96 16292 cassiopee_1.0.9-4_armhf.deb e0d5a93e2a2a5ea3af72b7d4c1fa87730a7d60b5 18784 libcassie-dev_1.0.9-4_armhf.deb 8f7597b06c9990522fa140e4f0b602f16a658def 51884 libcassie-doc_1.0.9-4_all.deb 2b2f453c9099434015b90b07ff5d9e2aabb4461d 349852 libcassie1v5-dbgsym_1.0.9-4_armhf.deb 3742af00cc727fa9acdd2936da1630547c5215d7 36416 libcassie1v5_1.0.9-4_armhf.deb Checksums-Sha256: f44329cd0f32bf1ddd4b77c47f958280f85afc55d3087fdfdbd0f9681f38ba78 136628 cassiopee-dbgsym_1.0.9-4_armhf.deb e1a0f1265e6e38c3f2c7705459c4a9f2922de344a48ae82fc60d6b59c9406c56 7819 cassiopee_1.0.9-4_armhf.buildinfo b68bdde4818873fffd43c3ce32f2f6868721b1bfcb7c8e50d5f793bfbe4d6a60 16292 cassiopee_1.0.9-4_armhf.deb 6aa09f31738fb0202229e255f5c78998582bb3fa88ee482a917e492e7daf7323 18784 libcassie-dev_1.0.9-4_armhf.deb e8adaaab3d3accd53e8c8cc05a5407e58358830dedd931b0aafd5b606f8d7de0 51884 libcassie-doc_1.0.9-4_all.deb 76ab7f9c91b78af4513cecc0c533a3fc60090168c3030753ef1fc1a4943efecd 349852 libcassie1v5-dbgsym_1.0.9-4_armhf.deb 9576be399d293d3595e6e998bd3953f182555274aab86199a12ce399b7132656 36416 libcassie1v5_1.0.9-4_armhf.deb Files: 9bcda9104f6d5514c56ce30811cd27bb 136628 debug optional cassiopee-dbgsym_1.0.9-4_armhf.deb 539bcf81442f6f3dab43eeb44ce74a34 7819 science optional cassiopee_1.0.9-4_armhf.buildinfo c1c8636763e1a8ce7692112870aefbff 16292 science optional cassiopee_1.0.9-4_armhf.deb dc5ced81c0e7fcb3509cf4f42805a986 18784 libdevel optional libcassie-dev_1.0.9-4_armhf.deb 6729ab2ed076225c46fa9337736f1cdd 51884 doc optional libcassie-doc_1.0.9-4_all.deb 8191367b2587a398edc9437de86120e3 349852 debug optional libcassie1v5-dbgsym_1.0.9-4_armhf.deb cace63427d920d74adec067f6be948e8 36416 libs optional libcassie1v5_1.0.9-4_armhf.deb Thu Jan 16 15:26:27 UTC 2025 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_25-12877.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/cassiopee_1.0.9-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/cassiopee_1.0.9-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/cassiopee_1.0.9-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/b1/cassiopee_1.0.9-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.0KpRzwIM/b2/cassiopee_1.0.9-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.374s) 0.374s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.031s) 0.031s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 735ms CPU time consumed: 732ms Thu Jan 16 15:26:29 UTC 2025 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Thu Jan 16 15:26:29 UTC 2025 I: cassiopee from trixie built successfully and reproducibly on armhf. Thu Jan 16 15:26:30 UTC 2025 I: Submitting .buildinfo files to external archives: Thu Jan 16 15:26:30 UTC 2025 I: Submitting 12K b1/cassiopee_1.0.9-4_armhf.buildinfo.asc Thu Jan 16 15:26:31 UTC 2025 I: Submitting 12K b2/cassiopee_1.0.9-4_armhf.buildinfo.asc Thu Jan 16 15:26:31 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jan 16 15:26:31 UTC 2025 I: Done submitting .buildinfo files. Thu Jan 16 15:26:31 UTC 2025 I: Removing signed cassiopee_1.0.9-4_armhf.buildinfo.asc files: removed './b1/cassiopee_1.0.9-4_armhf.buildinfo.asc' removed './b2/cassiopee_1.0.9-4_armhf.buildinfo.asc'