Sat Jan 25 09:21:58 UTC 2025 I: starting to build edtsurf/trixie/armhf on jenkins on '2025-01-25 09:21' Sat Jan 25 09:21:58 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_11/9369/console.log Sat Jan 25 09:21:58 UTC 2025 I: Downloading source for trixie/edtsurf=0.2009-10 --2025-01-25 09:21:59-- http://deb.debian.org/debian/pool/main/e/edtsurf/edtsurf_0.2009-10.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2026 (2.0K) [text/prs.lines.tag] Saving to: ‘edtsurf_0.2009-10.dsc’ 0K . 100% 344M=0s 2025-01-25 09:21:59 (344 MB/s) - ‘edtsurf_0.2009-10.dsc’ saved [2026/2026] Sat Jan 25 09:21:59 UTC 2025 I: edtsurf_0.2009-10.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: edtsurf Binary: edtsurf Architecture: any Version: 0.2009-10 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Pranav Ballaney Homepage: https://zhanglab.ccmb.med.umich.edu/EDTSurf/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/edtsurf Vcs-Git: https://salsa.debian.org/med-team/edtsurf.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: edtsurf deb science optional arch=any Checksums-Sha1: f052d417db24a706866dd2f98c069f026c575c7a 38539 edtsurf_0.2009.orig.tar.gz 100acdf1684c739328ce1e8d5b9f08c7f2b4b20e 99696 edtsurf_0.2009-10.debian.tar.xz Checksums-Sha256: 9025455d00d967016fd50635d4bf550d78097ee9160ca33e3e6246b9b21bea7a 38539 edtsurf_0.2009.orig.tar.gz 6dca4d8a84aa7dcac0d5c012f3554625e3623a397bca41b65119cbaa33d9f53c 99696 edtsurf_0.2009-10.debian.tar.xz Files: ed09afbe1a3673aaa8095bfdd69454a2 38539 edtsurf_0.2009.orig.tar.gz 1daf6b5792c18b2a8e895bddc5176969 99696 edtsurf_0.2009-10.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmAS3bEACgkQPCZ2P2xn 5uKfRg/+I/NJPNgrY/HLh2UJL5T2z42WpjpOLSfaTXMtD+uPTNui6q3lhCsEkCBW 8C84B9XsI6UEifgjluIwSvpmVb3fytxv0XsUccwQoHZtF2tHF8SRbsJEA+Pelv6M CLKRECg8SwimgaYYnvw5mCEIyXsyfAvxU5nTbHI3l3UIOkflQ9ARTb8TBPBROTO+ 6pGtxLs+Fikp7LX56gCczx+6bmSFys/UrmSIAOrmmx4Gd6ndOzXE+ndK90W7szaP FoikNRrxI7ur7YFl0FUObfu6lYiWe7bNqNKvajImqWYxoKnSM7H3KWt5CV4AboNu Y01LqNVO1tfzGwTaUfM4fzlLCKWeAdbcNTlDg9HYzjb/8KywUIgl4jKTbC/Oa4YH noS9Q1X1Z1ekyhwdWCgYrp+DgXZ9mY9srK0cpSPvW0Cf88otomk68hPptpZoTqSz xLGS7Cbc92NorTMbt62KWicJvFFkozXv/M03gbPmBrY8UYidm7HAxLPXhrNyTiJC HrMxzSFggcXqcAUMSDG2GevrtmqB8b1K4jbmBFLKPkUXEgQzN+aEMAKY3XZOe34n YEi/g5w9E5lStMgaVDZaZyxrZifsC6FWRrxvdHLLIiadRL5c8CjjIy9myzEN9dVr sCCxKXo5LiCSPcf8YxXlkh5I1MUSUctjWwLy4yPsi0akVucn5gs= =MEzt -----END PGP SIGNATURE----- Sat Jan 25 09:21:59 UTC 2025 I: Checking whether the package is not for us Sat Jan 25 09:21:59 UTC 2025 I: Starting 1st build on remote node wbq0-armhf-rb.debian.net. Sat Jan 25 09:21:59 UTC 2025 I: Preparing to do remote build '1' on wbq0-armhf-rb.debian.net. Sat Jan 25 09:27:05 UTC 2025 I: Deleting $TMPDIR on wbq0-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jan 24 21:22:09 -12 2025 I: pbuilder-time-stamp: 1737796929 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [edtsurf_0.2009-10.dsc] I: copying [./edtsurf_0.2009.orig.tar.gz] I: copying [./edtsurf_0.2009-10.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./edtsurf_0.2009-10.dsc: unsupported subcommand dpkg-source: info: extracting edtsurf in edtsurf-0.2009 dpkg-source: info: unpacking edtsurf_0.2009.orig.tar.gz dpkg-source: info: unpacking edtsurf_0.2009-10.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying CFLAGS_missing_in_Makefile.patch dpkg-source: info: applying fix-use-of-unsigned-char.patch dpkg-source: info: applying fix_return_values.patch dpkg-source: info: applying cross.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6346/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='5c7df559b5b04fb3816a9c8edbe49028' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6346' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/pbuilderrc_F9oJ --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/b1 --logfile b1/build.log edtsurf_0.2009-10.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux wbq0 6.1.0-30-armmp #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/6346/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After unpacking 74.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-4 [196 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.4-1 [84.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-4 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.23 [90.6 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libtool all 2.5.4-2 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-4 [1489 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf debhelper all 13.23 [919 kB] Fetched 19.6 MB in 2s (13.0 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-4_armhf.deb ... Unpacking gettext-base (0.22.5-4) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_armhf.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-1_armhf.deb ... Unpacking bsdextrautils (2.40.4-1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_armhf.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-4_all.deb ... Unpacking autopoint (0.22.5-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.23_all.deb ... Unpacking libdebhelper-perl (13.23) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-2_all.deb ... Unpacking libtool (2.5.4-2) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../21-libelf1t64_0.192-4_armhf.deb ... Unpacking libelf1t64:armhf (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libunistring5:armhf. Preparing to unpack .../23-libunistring5_1.3-1_armhf.deb ... Unpacking libunistring5:armhf (1.3-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-6_armhf.deb ... Unpacking libicu72:armhf (72.1-6) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-4_armhf.deb ... Unpacking gettext (0.22.5-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.23_all.deb ... Unpacking debhelper (13.23) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libicu72:armhf (72.1-6) ... Setting up bsdextrautils (2.40.4-1) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.23) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-4) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:armhf (1.3-1) ... Setting up autopoint (0.22.5-4) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-4) ... Setting up libtool (2.5.4-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.23) ... Processing triggers for libc-bin (2.40-5) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/edtsurf-0.2009/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../edtsurf_0.2009-10_source.changes dpkg-buildpackage: info: source package edtsurf dpkg-buildpackage: info: source version 0.2009-10 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/edtsurf-0.2009' dh_clean rm -f EDTSurf make[1]: Leaving directory '/build/reproducible-path/edtsurf-0.2009' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/edtsurf-0.2009' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/edtsurf-0.2009=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c ParsePDB.cpp -o ParsePDB.o g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/edtsurf-0.2009=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c ProteinSurface.cpp -o ProteinSurface.o g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/edtsurf-0.2009=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c EDTSurf.cpp -o EDTSurf.o ParsePDB.cpp: In member function 'bool ParsePDB::loadpdb(char*)': ParsePDB.cpp:1462:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1462 | fgets(oneline,255,filein); | ~~~~~^~~~~~~~~~~~~~~~~~~~ ParsePDB.cpp: In member function 'void ParsePDB::splitpdb()': ParsePDB.cpp:1524:55: warning: '%d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 1524 | sprintf(tmpn,"%d",i); | ^~ ParsePDB.cpp:1524:54: note: directive argument in the range [10, 2147483647] 1524 | sprintf(tmpn,"%d",i); | ^~~~ In file included from /usr/include/stdio.h:970, from CommonPara.h:10, from ParsePDB.cpp:12: In function 'int sprintf(char*, const char*, ...)', inlined from 'void ParsePDB::splitpdb()' at ParsePDB.cpp:1524:13: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -Wl,-z,relro -Wl,-z,now ParsePDB.o ProteinSurface.o EDTSurf.o -o EDTSurf rm *.o make[1]: Leaving directory '/build/reproducible-path/edtsurf-0.2009' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/edtsurf/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'edtsurf-dbgsym' in '../edtsurf-dbgsym_0.2009-10_armhf.deb'. dpkg-deb: building package 'edtsurf' in '../edtsurf_0.2009-10_armhf.deb'. dpkg-genbuildinfo --build=binary -O../edtsurf_0.2009-10_armhf.buildinfo dpkg-genchanges --build=binary -O../edtsurf_0.2009-10_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6346 and its subdirectories I: Current time: Fri Jan 24 21:27:00 -12 2025 I: pbuilder-time-stamp: 1737797220 Sat Jan 25 09:27:08 UTC 2025 I: 1st build successful. Starting 2nd build on remote node virt64b-armhf-rb.debian.net. Sat Jan 25 09:27:08 UTC 2025 I: Preparing to do remote build '2' on virt64b-armhf-rb.debian.net. Sat Jan 25 09:29:53 UTC 2025 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. Sat Jan 25 09:29:55 UTC 2025 I: edtsurf_0.2009-10_armhf.changes: Format: 1.8 Date: Thu, 28 Jan 2021 16:50:25 +0100 Source: edtsurf Binary: edtsurf edtsurf-dbgsym Architecture: armhf Version: 0.2009-10 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: edtsurf - triangulated mesh surfaces for protein structures Closes: 980441 Changes: edtsurf (0.2009-10) unstable; urgency=medium . * Team upload. * debian/rules: for i386 compile with -ffloat-store. Closes: #980441 * debian/test/run-unit-test: run all tests on i386 * Standards-Version: 4.5.1 (routine-update) Checksums-Sha1: b4d42319b6b04d13c1273b71e8a802694da9a06b 98388 edtsurf-dbgsym_0.2009-10_armhf.deb 1d076ef850fe3414fe398dba87e9597f00f29ea3 4838 edtsurf_0.2009-10_armhf.buildinfo b69f534df68dc112e3f42071a955bf8fee43d2ff 148188 edtsurf_0.2009-10_armhf.deb Checksums-Sha256: 52db4d4e4fad113abfd0dbe634492ccc0f460d9417b61b5a751e17ec308218e2 98388 edtsurf-dbgsym_0.2009-10_armhf.deb 49d38da9fd22188b4f0652c6b2a5ecf523d8028d25d0b68f79b3d6aed5334bae 4838 edtsurf_0.2009-10_armhf.buildinfo 8226353e08b100b04b4107b85e1e4043d1ebf90ecfe8fd75ab619ef7956bbae7 148188 edtsurf_0.2009-10_armhf.deb Files: 8aa7e1b4ace56bb85df4bbd37f9c2a95 98388 debug optional edtsurf-dbgsym_0.2009-10_armhf.deb d0ff67643832366b18a49c2224caa30b 4838 science optional edtsurf_0.2009-10_armhf.buildinfo f5dd8f6ae8050dab0759f2c71b2517a8 148188 science optional edtsurf_0.2009-10_armhf.deb Sat Jan 25 09:29:56 UTC 2025 I: diffoscope 285 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_11-9369.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/edtsurf_0.2009-10.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/edtsurf_0.2009-10.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/edtsurf_0.2009-10.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/b1/edtsurf_0.2009-10_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.byEvjLF9/b2/edtsurf_0.2009-10_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.345s) 0.345s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 649ms CPU time consumed: 649ms Sat Jan 25 09:29:57 UTC 2025 I: diffoscope 285 found no differences in the changes files, and a .buildinfo file also exists. Sat Jan 25 09:29:57 UTC 2025 I: edtsurf from trixie built successfully and reproducibly on armhf. Sat Jan 25 09:29:58 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Jan 25 09:29:58 UTC 2025 I: Submitting 8.0K b1/edtsurf_0.2009-10_armhf.buildinfo.asc Sat Jan 25 09:29:59 UTC 2025 I: Submitting 8.0K b2/edtsurf_0.2009-10_armhf.buildinfo.asc Sat Jan 25 09:29:59 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jan 25 09:29:59 UTC 2025 I: Done submitting .buildinfo files. Sat Jan 25 09:29:59 UTC 2025 I: Removing signed edtsurf_0.2009-10_armhf.buildinfo.asc files: removed './b1/edtsurf_0.2009-10_armhf.buildinfo.asc' removed './b2/edtsurf_0.2009-10_armhf.buildinfo.asc'