Thu Dec 12 02:39:27 UTC 2024 I: starting to build libchado-perl/trixie/armhf on jenkins on '2024-12-12 02:39' Thu Dec 12 02:39:27 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_25/10848/console.log Thu Dec 12 02:39:27 UTC 2024 I: Downloading source for trixie/libchado-perl=1.31-6 --2024-12-12 02:39:28-- http://deb.debian.org/debian/pool/main/libc/libchado-perl/libchado-perl_1.31-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2547 (2.5K) [text/prs.lines.tag] Saving to: ‘libchado-perl_1.31-6.dsc’ 0K .. 100% 401M=0s 2024-12-12 02:39:28 (401 MB/s) - ‘libchado-perl_1.31-6.dsc’ saved [2547/2547] Thu Dec 12 02:39:28 UTC 2024 I: libchado-perl_1.31-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libchado-perl Binary: libchado-perl, chado-utils Architecture: all Version: 1.31-6 Maintainer: Debian Med Packaging Team Uploaders: Scott Cain , Steffen Moeller , Olivier Sallou , Andreas Tille Homepage: http://gmod.org/wiki/Chado Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/libchado-perl Vcs-Git: https://salsa.debian.org/med-team/libchado-perl.git Build-Depends: debhelper (>= 11~) Build-Depends-Indep: perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl Package-List: chado-utils deb perl optional arch=all libchado-perl deb perl optional arch=all Checksums-Sha1: 47de881786d4f1a86264ca9ce9ad5d05650d7aa9 5051094 libchado-perl_1.31.orig.tar.gz 1949c8bda2501dce59c88e4c0710f8330cc959e3 14660 libchado-perl_1.31-6.debian.tar.xz Checksums-Sha256: 75eb45e681f4cdb41884cccbf62828604e4e206b821f90c7ed155d809bb4ad7a 5051094 libchado-perl_1.31.orig.tar.gz 431d96ee6b4f52368bae2b546fed5a8cd83f18790e7903adee58ff8d4b751f5e 14660 libchado-perl_1.31-6.debian.tar.xz Files: a4748b03324185eea185b2391b94e36a 5051094 libchado-perl_1.31.orig.tar.gz 06a3d24d0db664f6624d702fefc773c2 14660 libchado-perl_1.31-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEX7Rvg9O5UgRjNdJteNxo2zJthDgFAl3ow0YTHG9zYWxsb3VA ZGViaWFuLm9yZwAKCRB43GjbMm2EOGXxD/49UhO7Xf4WObLTptDQnIW1aGvkXMVF IYtSmXTsxVj9PNJB8SPawbwtjf60crdyEuHXYhsNOlkEDCQ1g9gwQ0OVRZynw7w/ 2nX2zvy/bCqGoIfMuCj06sQ3gj3N87cwdnWsz1SkkNxGjYVSNHMREirVbmCXW2qu F1U3h2fLbsdm7dpcRkMPehcy+1pdgZlRtCUrIiJfPGtF7yw6wTRd6OIxJwT4QHRh e9kpvpvoiJmWaTJtXeuWN3Qm0odRET3467wz1Nmf5tFCTavf1obhJEdrfz7z8NeZ S7X2CjtPRFr6UoDBAiiFOaM6ESEb3eNVaV5AvSpvw+cMVhybPsOJRFuhsrvJpiGg A13riPhBM0+DrJYkwZWiS94jjg3GLK9bgoEKRl6xu7D+Se1Fw5QBWurKyYpmwWNL /fVU2Qsh2pF7qwn5O0V4oM/ghu39nuc03z+tIvC6HTadVs2RTp0DoDIUxSM8pr/l JsJ9UcYtLyeypxhakFPjk+YOyk8OlY2R1Adl3QytkGDS6D09U9aT2C0p+hsveHx6 H9R11bbqb81uIL0XP+TX53nbrm3ryN9bmm0yR1fUaWBWNwnCo5+g1sksmbviYT99 f8TnhKMUD6rEx8Y9/3Cxzbc3MjuozUteYDS28S744HS0chhdJhmwILlB3zMgJjjE hOBn6JSFxXCVEg== =GLan -----END PGP SIGNATURE----- Thu Dec 12 02:39:28 UTC 2024 I: Checking whether the package is not for us Thu Dec 12 02:39:28 UTC 2024 I: Starting 1st build on remote node virt32c-armhf-rb.debian.net. Thu Dec 12 02:39:28 UTC 2024 I: Preparing to do remote build '1' on virt32c-armhf-rb.debian.net. Thu Dec 12 02:42:38 UTC 2024 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 11 14:39:40 -12 2024 I: pbuilder-time-stamp: 1733971180 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchado-perl_1.31-6.dsc] I: copying [./libchado-perl_1.31.orig.tar.gz] I: copying [./libchado-perl_1.31-6.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 5 08:43:50 2019 gpgv: using RSA key 5FB46F83D3B952046335D26D78DC68DB326D8438 gpgv: issuer "osallou@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchado-perl_1.31-6.dsc: no acceptable signature found dpkg-source: info: extracting libchado-perl in libchado-perl-1.31 dpkg-source: info: unpacking libchado-perl_1.31.orig.tar.gz dpkg-source: info: unpacking libchado-perl_1.31-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_perl_headers dpkg-source: info: applying force_SIMPLE dpkg-source: info: applying fix_spelling_manpage dpkg-source: info: applying fix_manpages dpkg-source: info: applying setBinPathForBuilder dpkg-source: info: applying remove_pl_extension.patch dpkg-source: info: applying 0001-Sort-generated-build.conf-for-reproducibility.patch dpkg-source: info: applying 0001-Sort-installed-configuration-file-for-reproducibilit.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23552/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='1d259c04ba544a5fbb7fe6cfcabc4953' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='23552' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/pbuilderrc_srmQ --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/b1 --logfile b1/build.log libchado-perl_1.31-6.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32c 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/23552/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19680 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-pg-perl; however: Package libclass-dbi-pg-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-libxslt-perl; however: Package libxml-libxslt-perl is not installed. pbuilder-satisfydepends-dummy depends on liblog-log4perl-perl; however: Package liblog-log4perl-perl is not installed. pbuilder-satisfydepends-dummy depends on bioperl; however: Package bioperl is not installed. pbuilder-satisfydepends-dummy depends on libgo-perl; however: Package libgo-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbd-pg-perl; however: Package libdbd-pg-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbi-perl; however: Package libdbi-perl is not installed. pbuilder-satisfydepends-dummy depends on libgd-gd2-perl; however: Package libgd-gd2-perl is not installed. pbuilder-satisfydepends-dummy depends on libdigest-md5-file-perl; however: Package libdigest-md5-file-perl is not installed. pbuilder-satisfydepends-dummy depends on libgraph-perl; however: Package libgraph-perl is not installed. pbuilder-satisfydepends-dummy depends on libdata-stag-perl; however: Package libdata-stag-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-perl; however: Package libxml-perl is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-perl; however: Package libclass-dbi-perl is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-pager-perl; however: Package libclass-dbi-pager-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-simple-perl; however: Package libxml-simple-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtemplate-perl; however: Package libtemplate-perl is not installed. pbuilder-satisfydepends-dummy depends on libcgi-session-perl; however: Package libcgi-session-perl is not installed. pbuilder-satisfydepends-dummy depends on libsql-translator-perl; however: Package libsql-translator-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbix-dbstag-perl; however: Package libdbix-dbstag-perl is not installed. pbuilder-satisfydepends-dummy depends on libmodule-build-perl; however: Package libmodule-build-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20230802{a} libalgorithm-diff-perl{a} libaom3{a} libappconfig-perl{a} libarchive-zip-perl{a} libavif16{a} libb-hooks-op-check-perl{a} libbio-perl-perl{a} libbrotli1{a} libcairo2{a} libcapture-tiny-perl{a} libcarp-clan-perl{a} libcdt5{a} libcgi-pm-perl{a} libcgi-session-perl{a} libcgraph6{a} libclass-accessor-chained-perl{a} libclass-accessor-perl{a} libclass-data-inheritable-perl{a} libclass-dbi-pager-perl{a} libclass-dbi-perl{a} libclass-dbi-pg-perl{a} libclass-inspector-perl{a} libclass-makemethods-perl{a} libclass-method-modifiers-perl{a} libclass-trigger-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcom-err2{a} libdata-page-perl{a} libdata-stag-perl{a} libdatrie1{a} libdav1d7{a} libdbd-pg-perl{a} libdbi-perl{a} libdbix-contextualfetch-perl{a} libdbix-dbschema-perl{a} libdbix-dbstag-perl{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-stacktrace-perl{a} libdigest-md5-file-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libexporter-lite-perl{a} libfile-listing-perl{a} libfile-sharedir-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfreezethaw-perl{a} libfribidi0{a} libgav1-1{a} libgd-perl{a} libgd3{a} libglib2.0-0t64{a} libgo-perl{a} libgraph-perl{a} libgraphite2-3{a} libgraphviz-perl{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheap-perl{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libice6{a} libicu72{a} libima-dbi-perl{a} libimagequant0{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libio-stringy-perl{a} libipc-run-perl{a} libjbig0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} libldap-2.5-0{a} liblerc4{a} liblog-log4perl-perl{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmodule-build-perl{a} libmodule-runtime-perl{a} libmoo-perl{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpackage-variant-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libparse-recdescent-perl{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpq5{a} libproc2-0{a} libraqm0{a} librav1e0.7{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libset-object-perl{a} libsharpyuv0{a} libsm6{a} libsql-translator-perl{a} libstrictures-perl{a} libsub-name-perl{a} libsub-quote-perl{a} libsub-uplevel-perl{a} libsvtav1enc2{a} libtemplate-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libuniversal-moniker-perl{a} liburi-perl{a} libwebp7{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml-libxml-perl{a} libxml-libxslt-perl{a} libxml-namespacesupport-perl{a} libxml-parser-perl{a} libxml-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml-simple-perl{a} libxml-twig-perl{a} libxml-xpath-perl{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6t64{a} libyaml-perl{a} libyuv0{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} procps{a} sensible-utils{a} ucf{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl fonts-liberation krb5-locales libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libcgi-fast-perl libclass-dbi-abstractsearch-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-sqlite3-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl libipc-shareable-perl libjson-maybexs-perl libldap-common liblingua-en-inflect-perl liblist-moreutils-perl liblog-dispatch-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libmodule-signature-perl libnamespace-clean-perl libpod-readme-perl libpostscript-perl libsasl2-modules libset-scalar-perl libsoap-lite-perl libsoftware-license-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libtext-iconv-perl libtext-recordparser-perl libtie-ixhash-perl libxml-checker-perl libxml-dom-xpath-perl libxml-sax-expat-perl libxml-sax-writer-perl libxml-writer-perl libxstring-perl libyaml-libyaml-perl libyaml-syck-perl linux-sysctl-defaults lynx perl-doc perl-tk psmisc shared-mime-info wget xdg-user-dirs xsltproc 0 packages upgraded, 215 newly installed, 0 to remove and 0 not upgraded. Need to get 50.9 MB of archives. After unpacking 156 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-6 [1091 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-12 [83.9 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf ucf all 3.0045 [45.2 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libio-string-perl all 1.08-4 [12.1 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libdata-stag-perl all 0.14-3 [448 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libclass-data-inheritable-perl all 0.10-1 [8632 B] Get: 26 http://deb.debian.org/debian trixie/main armhf libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libexception-class-perl all 1.45-1 [34.6 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libtest-deep-perl all 1.204-1 [52.9 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libtext-diff-perl all 1.45-2 [27.2 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libtest-differences-perl all 0.71-1 [17.9 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libtest-exception-perl all 0.43-3 [16.9 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libtest-warn-perl all 0.37-2 [14.5 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libtest-most-perl all 0.38-1 [25.1 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf bioperl all 1.7.8-1 [246 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf fontconfig armhf 2.15.0-1.1+b1 [461 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libcdt5 armhf 2.42.4-2+b1 [37.9 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libcgraph6 armhf 2.42.4-2+b1 [56.8 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libaom3 armhf 3.11.0-1 [1599 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libdav1d7 armhf 1.5.0-1+b1 [250 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libabsl20230802 armhf 20230802.1-4 [432 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libgav1-1 armhf 0.19.0-2+b2 [298 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf librav1e0.7 armhf 0.7.1-7+b2 [587 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libsvtav1enc2 armhf 2.2.1+dfsg-2 [937 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libyuv0 armhf 0.0.1898.20241125-1 [86.6 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libavif16 armhf 1.1.1-1 [103 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libheif-plugin-dav1d armhf 1.19.3-1 [10.8 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf libde265-0 armhf 1.0.15-1+b2 [145 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libheif-plugin-libde265 armhf 1.19.3-1 [13.9 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libheif1 armhf 1.19.3-1 [410 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-3 [1326 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libxpm4 armhf 1:3.5.17-1+b2 [50.4 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libgd3 armhf 2.3.3-12+b1 [105 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libgts-0.7-5t64 armhf 0.7.6+darcs121130-5.2+b1 [133 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libpixman-1-0 armhf 0.44.0-3 [164 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libxcb-render0 armhf 1.17.0-2+b1 [114 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libxcb-shm0 armhf 1.17.0-2+b1 [105 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libcairo2 armhf 1.18.2-2 [443 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libltdl7 armhf 2.4.7-8 [390 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libthai-data all 0.1.29-2 [168 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libdatrie1 armhf 0.2.13-3+b1 [34.7 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libthai0 armhf 0.1.29-2+b1 [46.0 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libpango-1.0-0 armhf 1.55.0+ds-3 [200 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf libpangoft2-1.0-0 armhf 1.55.0+ds-3 [47.7 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf libpangocairo-1.0-0 armhf 1.55.0+ds-3 [31.3 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf libpathplan4 armhf 2.42.4-2+b1 [39.9 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf libgvc6 armhf 2.42.4-2+b1 [581 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libgvpr2 armhf 2.42.4-2+b1 [168 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf liblab-gamut1 armhf 2.42.4-2+b1 [198 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libice6 armhf 2:1.1.1-1 [58.5 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libsm6 armhf 2:1.2.4-1 [33.5 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf libxt6t64 armhf 1:1.2.1-1.2+b1 [160 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libxmu6 armhf 2:1.1.3-3+b3 [51.2 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libxaw7 armhf 2:1.0.16-1 [177 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf graphviz armhf 2.42.4-2+b1 [500 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libappconfig-perl all 1.71-2.3 [67.0 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libb-hooks-op-check-perl armhf 0.22-3+b2 [10.3 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf libcarp-clan-perl all 6.08-2 [14.1 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf liburi-perl all 5.30-1 [105 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf libhtml-parser-perl armhf 3.83-1+b1 [96.4 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf libcgi-pm-perl all 4.66-1 [217 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf libcgi-session-perl all 4.48-4 [118 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf libsub-name-perl armhf 0.27-1+b3 [12.0 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf libclass-accessor-perl all 0.51-2 [22.7 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf libclass-accessor-chained-perl all 0.01.1~debian-5 [8704 B] Get: 131 http://deb.debian.org/debian trixie/main armhf libio-stringy-perl all 2.113-2 [48.3 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf libclass-trigger-perl all 0.15-2 [12.4 kB] Get: 133 http://deb.debian.org/debian trixie/main armhf libclone-perl armhf 0.47-1+b1 [13.3 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf libdbi-perl armhf 1.645-1+b1 [854 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf libdbix-contextualfetch-perl all 1.03-5 [8352 B] Get: 136 http://deb.debian.org/debian trixie/main armhf libima-dbi-perl all 0.35-3 [23.3 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf libuniversal-moniker-perl all 0.08-10 [6108 B] Get: 138 http://deb.debian.org/debian trixie/main armhf libclass-dbi-perl all 3.0.17-5 [106 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf libdata-page-perl all 2.03-1 [11.6 kB] Get: 140 http://deb.debian.org/debian trixie/main armhf libexporter-lite-perl all 0.09-2 [10.7 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf libclass-dbi-pager-perl all 0.08-6 [8112 B] Get: 142 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.2~rc1-2 [22.9 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 145 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 146 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3+b1 [163 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf libpq5 armhf 17.2-1 [206 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf libdbd-pg-perl armhf 3.18.0-1+b3 [205 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf libclass-dbi-pg-perl all 0.09-6 [9700 B] Get: 154 http://deb.debian.org/debian trixie/main armhf libclass-inspector-perl all 1.36-3 [17.5 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf libclass-makemethods-perl all 1.01-7 [293 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf libclass-xsaccessor-perl armhf 1.19-4+b4 [35.1 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf libfreezethaw-perl all 0.5001-3 [16.0 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf libdbix-dbschema-perl all 0.47-1 [57.1 kB] Get: 160 http://deb.debian.org/debian trixie/main armhf libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf libencode-locale-perl all 1.05-3 [12.9 kB] Get: 162 http://deb.debian.org/debian trixie/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 163 http://deb.debian.org/debian trixie/main armhf libhttp-date-perl all 6.06-1 [10.7 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf libfile-listing-perl all 6.16-1 [12.4 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf libhtml-tree-perl all 5.07-3 [211 kB] Get: 166 http://deb.debian.org/debian trixie/main armhf libio-html-perl all 1.004-3 [16.2 kB] Get: 167 http://deb.debian.org/debian trixie/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf libhttp-message-perl all 7.00-2 [79.8 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf perl-openssl-defaults armhf 7+b2 [6708 B] Get: 172 http://deb.debian.org/debian trixie/main armhf libnet-ssleay-perl armhf 1.94-2 [319 kB] Get: 173 http://deb.debian.org/debian trixie/main armhf libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf libnet-http-perl all 6.23-1 [23.9 kB] Get: 175 http://deb.debian.org/debian trixie/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 178 http://deb.debian.org/debian trixie/main armhf libwww-perl all 6.77-1 [183 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf libxml-parser-perl armhf 2.47-1+b3 [196 kB] Get: 180 http://deb.debian.org/debian trixie/main armhf libxml-perl all 0.08-4 [93.0 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf libdbix-dbstag-perl all 0.12-4 [102 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf libdevel-callchecker-perl armhf 0.009-1+b1 [16.0 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf libdigest-md5-file-perl all 0.08-1.1 [9608 B] Get: 185 http://deb.debian.org/debian trixie/main armhf libfile-sharedir-perl all 1.118-3 [16.0 kB] Get: 186 http://deb.debian.org/debian trixie/main armhf libgd-perl armhf 2.78-1+b3 [127 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf libio-pty-perl armhf 1:1.20-1+b2 [33.8 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf libipc-run-perl all 20231003.0-2 [101 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf libxml-twig-perl all 1:3.52-3 [177 kB] Get: 190 http://deb.debian.org/debian trixie/main armhf libxml-xpath-perl all 1.48-1 [71.0 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf libgraphviz-perl all 2.24-1 [92.7 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf libyaml-perl all 1.31-1 [64.8 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf libgo-perl all 0.15-10 [265 kB] Get: 194 http://deb.debian.org/debian trixie/main armhf libheap-perl all 0.80-5 [34.3 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf libset-object-perl armhf 1.42-1+b5 [35.7 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf libgraph-perl all 1:0.9729-1 [108 kB] Get: 197 http://deb.debian.org/debian trixie/main armhf libparams-classify-perl armhf 0.015-2+b4 [21.2 kB] Get: 198 http://deb.debian.org/debian trixie/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf libimport-into-perl all 1.002005-2 [11.3 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf liblog-log4perl-perl all 1.57-1 [367 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf libmodule-build-perl all 0.423400-2 [252 kB] Get: 202 http://deb.debian.org/debian trixie/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 203 http://deb.debian.org/debian trixie/main armhf libsub-quote-perl all 2.006008-1 [21.8 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf libmoo-perl all 2.005005-1 [58.0 kB] Get: 205 http://deb.debian.org/debian trixie/main armhf libstrictures-perl all 2.000006-1 [18.6 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf libpackage-variant-perl all 1.003002-2 [13.9 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf libsql-translator-perl all 1.66-1 [364 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf libtemplate-perl armhf 2.27-1+b8 [545 kB] Get: 209 http://deb.debian.org/debian trixie/main armhf libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 210 http://deb.debian.org/debian trixie/main armhf libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf libxml-libxml-perl armhf 2.0207+dfsg+really+2.0134-5+b1 [298 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf libxml-libxslt-perl armhf 2.003000-2+b1 [45.5 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf libxml-simple-perl all 2.25-2 [69.8 kB] Fetched 50.9 MB in 2s (29.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19680 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-6_armhf.deb ... 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Unpacking libgo-perl (0.15-10) ... Selecting previously unselected package libheap-perl. Preparing to unpack .../193-libheap-perl_0.80-5_all.deb ... Unpacking libheap-perl (0.80-5) ... Selecting previously unselected package libset-object-perl. Preparing to unpack .../194-libset-object-perl_1.42-1+b5_armhf.deb ... Unpacking libset-object-perl (1.42-1+b5) ... Selecting previously unselected package libgraph-perl. Preparing to unpack .../195-libgraph-perl_1%3a0.9729-1_all.deb ... Unpacking libgraph-perl (1:0.9729-1) ... Selecting previously unselected package libparams-classify-perl:armhf. Preparing to unpack .../196-libparams-classify-perl_0.015-2+b4_armhf.deb ... Unpacking libparams-classify-perl:armhf (0.015-2+b4) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../197-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../198-libimport-into-perl_1.002005-2_all.deb ... Unpacking libimport-into-perl (1.002005-2) ... Selecting previously unselected package liblog-log4perl-perl. Preparing to unpack .../199-liblog-log4perl-perl_1.57-1_all.deb ... Unpacking liblog-log4perl-perl (1.57-1) ... Selecting previously unselected package libmodule-build-perl. Preparing to unpack .../200-libmodule-build-perl_0.423400-2_all.deb ... Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423400-2) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../201-librole-tiny-perl_2.002004-1_all.deb ... Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libsub-quote-perl. 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Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../208-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../209-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../210-libxml-sax-perl_1.02+dfsg-4_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-4) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../211-libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b1_armhf.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... Selecting previously unselected package libxslt1.1:armhf. Preparing to unpack .../212-libxslt1.1_1.1.35-1.1+b1_armhf.deb ... Unpacking libxslt1.1:armhf (1.1.35-1.1+b1) ... Selecting previously unselected package libxml-libxslt-perl:armhf. 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libice6:armhf (2:1.1.1-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxpm4:armhf (1:3.5.17-1+b2) ... Setting up libdbix-dbschema-perl (0.47-1) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up libnet-http-perl (6.23-1) ... Setting up libclass-accessor-chained-perl (0.01.1~debian-5) ... Setting up libexception-class-perl (1.45-1) ... Setting up libgraph-perl (1:0.9729-1) ... Setting up libdevel-callchecker-perl:armhf (0.009-1+b1) ... Setting up libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libdbix-contextualfetch-perl (1.03-5) ... Setting up libthai0:armhf (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libima-dbi-perl (0.35-3) ... Setting up libtest-exception-perl (0.43-3) ... Setting up libdata-page-perl (2.03-1) ... Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libgav1-1:armhf (0.19.0-2+b2) ... Setting up ucf (3.0045) ... Setting up libtemplate-perl (2.27-1+b8) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libgvpr2:armhf (2.42.4-2+b1) ... Setting up groff-base (1.23.0-6) ... Setting up libhtml-parser-perl:armhf (3.83-1+b1) ... Setting up libxslt1.1:armhf (1.1.35-1.1+b1) ... Setting up libclass-dbi-perl (3.0.17-5) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up libsm6:armhf (2:1.2.4-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:armhf (1.1.1-1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:armhf (0.015-2+b4) ... Setting up libpango-1.0-0:armhf (1.55.0+ds-3) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libpq5:armhf (17.2-1) ... Setting up libdbd-pg-perl (3.18.0-1+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcairo2:armhf (1.18.2-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libcgi-session-perl (4.48-4) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up libxt6t64:armhf (1:1.2.1-1.2+b1) ... Setting up libclass-dbi-pager-perl (0.08-6) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libpangoft2-1.0-0:armhf (1.55.0+ds-3) ... Setting up libpangocairo-1.0-0:armhf (1.55.0+ds-3) ... Setting up bioperl (1.7.8-1) ... Setting up libclass-dbi-pg-perl (0.09-6) ... Setting up libxmu6:armhf (2:1.1.3-3+b3) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up debhelper (13.20) ... Setting up libxaw7:armhf (2:1.0.16-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libxml-libxslt-perl:armhf (2.003000-2+b1) ... Setting up libpackage-variant-perl (1.003002-2) ... Setting up libsql-translator-perl (1.66-1) ... Setting up libheif-plugin-dav1d:armhf (1.19.3-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libheif-plugin-libde265:armhf (1.19.3-1) ... Setting up libwww-perl (6.77-1) ... Setting up libheif1:armhf (1.19.3-1) ... Setting up libdigest-md5-file-perl (0.08-1.1) ... Setting up libgd3:armhf (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libxml-xpath-perl (1.48-1) ... Setting up libgd-perl (2.78-1+b3) ... Setting up libxml-perl (0.08-4) ... Setting up libgraphviz-perl (2.24-1) ... Setting up libdbix-dbstag-perl (0.12-4) ... Setting up libgo-perl (0.15-10) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libchado-perl-1.31/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchado-perl_1.31-6_source.changes dpkg-buildpackage: info: source package libchado-perl dpkg-buildpackage: info: source version 1.31-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Olivier Sallou dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=perl_makemaker dh_auto_clean -O--buildsystem=perl_makemaker dh_autoreconf_clean -O--buildsystem=perl_makemaker dh_clean -O--buildsystem=perl_makemaker debian/rules build dh build --buildsystem=perl_makemaker dh_update_autotools_config -O--buildsystem=perl_makemaker dh_autoreconf -O--buildsystem=perl_makemaker debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' perl Makefile.PL INSTALL_BASE=/usr DBNAME=gmod-chado DBUSER=chado DBPASS=chado DBHOST=localhost DBPORT=5432 GMOD_ROOT=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado DBDRIVER=PostgreSQL RECONFIGURE=1 SIMPLE=Y LOCAL_TMP=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/tmp Building with the following database options: GMOD_ROOT=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado DBDRIVER=PostgreSQL DBNAME=gmod-chado DBUSER=chado DBPASS=chado DBHOST=localhost DBPORT=5432 SCHEMA= LOCAL_TMP=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/tmp DBORGANISM= DEFAULT= VERSION=1.31 Extracting /build/reproducible-path/libchado-perl-1.31/bin/../lib/Bio/Chado/AutoDBI.pm (with variable substitutions) initializing load scripts... Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'Chado' version '1.31' Building Chado Checking if your kit is complete... Looks good Warning: prerequisite Bio::Chado::Schema 0 not found. Generating a Unix-style Makefile Writing Makefile for chado Writing MYMETA.yml and MYMETA.json -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=- Makefile written. Now you should do the following, in order: 1. make (creates necessary build files) 2. sudo make install (creates $GMOD_ROOT and subdirectories) -*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-* STEP 3 WILL DELETE ANY DATA IN A DATABASE WITH THE DATABASE NAME YOU PROVIDED! -*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-* 3a. make load_schema (loads SQL schema into database) or 3b. make update (update an old Chado schema and stop here) 4. make prepdb (loads basic data) 5. make ontologies (loads data for various ontologies) Optional Targets: make rm_locks (removes ontology lock files, allowing installation of ontologies on successive builds of the database without removing the ontology files altogether) make clean (remove build related files and ontology tmp dir) make instructions (at any moment display these instructions) -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=- make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' dh_auto_build -O--buildsystem=perl_makemaker make -j3 make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' Skip blib/lib/Bio/GMOD/Bulkfiles/TableWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/GnomapWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Config.pm (unchanged) Skip blib/lib/Bio/Chado/Builder.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Config.pm (unchanged) Skip blib/lib/Bio/GMOD/Config2.pm (unchanged) Skip blib/lib/Bio/GMOD/Load/GFF.pm (unchanged) Skip blib/lib/Bio/FeatureIO/chado.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/FeatureWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/SeqUtils.pm (unchanged) Skip blib/lib/Bio/Chado/AutoDBI.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/AcodeWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/BulkWriter.pm (unchanged) Skip blib/lib/Bio/Chado/Config.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/FastaWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Tools/ETA.pm (unchanged) Skip blib/lib/Bio/FeatureIO/chadobulk.pm (unchanged) Skip blib/lib/Bio/GMOD/Load.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/BlastWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter/FeatureIterator.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter/Wormbase.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/MySplitLocation.pm (unchanged) "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" load/bin/bulk_load_gff3.PLS load/bin/gmod_bulk_load_gff3.pl "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/conf_install.PLS install_util/conf_install.pl Extracting conf_install.pl (with variable substitutions) "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/src_install.PLS install_util/src_install.pl Extracting src_install.pl (with variable substitutions) cp bin/gmod_add_organism.pl blib/script/gmod_add_organism.pl cp bin/gmod_apollo_triggers.pl blib/script/gmod_apollo_triggers.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_add_organism.pl cp load/bin/gmod_bulk_load_gff3.pl blib/script/gmod_bulk_load_gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_apollo_triggers.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_gff3.pl cp bin/gmod_bulk_load_pubmed.pl blib/script/gmod_bulk_load_pubmed.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_pubmed.pl cp bin/gmod_chado_properties.pl blib/script/gmod_chado_properties.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_chado_properties.pl cp bin/gmod_extract_dbxref_from_gff.pl blib/script/gmod_extract_dbxref_from_gff.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_extract_dbxref_from_gff.pl cp bin/gmod_fasta2gff3.pl blib/script/gmod_fasta2gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_fasta2gff3.pl cp bin/gmod_gff3_preprocessor.pl blib/script/gmod_gff3_preprocessor.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_gff3_preprocessor.pl cp bin/gmod_load_cvterms.pl blib/script/gmod_load_cvterms.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_load_cvterms.pl cp bin/gmod_make_cvtermpath.pl blib/script/gmod_make_cvtermpath.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_cvtermpath.pl cp bin/gmod_make_gff_from_dbxref.pl blib/script/gmod_make_gff_from_dbxref.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_gff_from_dbxref.pl cp bin/gmod_materialized_view_tool.pl blib/script/gmod_materialized_view_tool.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_materialized_view_tool.pl cp bin/gmod_sort_gff3.pl blib/script/gmod_sort_gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_sort_gff3.pl Manifying 12 pod documents Manifying 26 pod documents make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' echo "Skipping tests to avoid db access" Skipping tests to avoid db access make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=perl_makemaker dh_testroot -O--buildsystem=perl_makemaker dh_prep -O--buildsystem=perl_makemaker dh_installdirs -O--buildsystem=perl_makemaker dh_auto_install -O--buildsystem=perl_makemaker make -j3 install DESTDIR=/build/reproducible-path/libchado-perl-1.31/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' "/usr/bin/perl" "/build/reproducible-path/libchado-perl-1.31/install_util/conf_install.pl" 'GMOD_ROOT=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado' 'VERSION=1.31' "/usr/bin/perl" "/build/reproducible-path/libchado-perl-1.31/install_util/src_install.pl" 'GMOD_ROOT=/build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado' Manifying 12 pod documents Manifying 26 pod documents Appending installation info to /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/perllocal.pod Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chadobulk.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chado.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config2.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/SeqUtils.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Config.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/Wormbase.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/FeatureIterator.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Tools/ETA.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FastaWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/TableWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MySplitLocation.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/AcodeWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FeatureWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BlastWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BulkWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GnomapWriter.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load/GFF.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Config.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Builder.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/AutoDBI.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_add_organism.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_materialized_view_tool.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_gff_from_dbxref.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_cvtermpath.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_load_cvterms.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_pubmed.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_gff3_preprocessor.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_chado_properties.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_sort_gff3.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_fasta2gff3.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_gff3.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_extract_dbxref_from_gff.pl.1p Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::TableWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::AcodeWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FastaWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chadobulk.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::SWISS_CRC64.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::SeqUtils.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GenbankSubmitWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chado.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config2.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BulkWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Tools::ETA.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Config.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GnomapWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FeatureWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load::GFF.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Builder.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::FeatureIterator.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MyLargePrimarySeq.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MySplitLocation.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BlastWriter.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Config.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::Wormbase.3pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/dbi.tt2 Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff2biomart5.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz_svg.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_gff_from_dbxref.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/create-so-bridge.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi_viaTT.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/make_partial_indexes.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/chado-fix-flybase-instance.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_sort_gff3.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gencode2sql.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/privileges.tmpl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_fasta2gff3.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_cvtermpath.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_materialized_view_tool.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/ddltrans Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/test_load.sh Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_gff3.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2diagram.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.sh Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/create-bridge-sql.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/load_taxonomy_cvterms.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulkfiles.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/load_ncbi_taxonomy.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_add_organism.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/interactions2SIF.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2html.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_genes2gff.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/Skip_tables.pm Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/config.PLS Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_apollo_triggers.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/create_so_bridge_command Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff3_preprocessor.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/chado-build-schema.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_load_cvterms.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/GMODCallHome.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_extract_dbxref_from_gff.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_update_chado.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/AutoDBI.PL Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_pubmed.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/addcascades Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/test_load.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_chado_properties.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/gmod_dump_gff3.pl Installing /build/reproducible-path/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_snp2gff.pl make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' dh_install -O--buildsystem=perl_makemaker rm -f debian/libchado-perl/usr/share/gmod/chado/load/etc/load.conf sed -i 's/SQLFILE=\/.*\/libchado-perl/SQLFILE=/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod-chado.conf sed -i 's/TMP=\/.*\/tmp/CONF=\/tmp/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf sed -i 's/CONF=.*\/conf/CONF=\/etc\/gmod/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf mv /build/reproducible-path/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado/conf/* debian/libchado-perl/etc/gmod/ # Give exexution rights to perl scripts find debian/libchado-perl/ -name *.pl | xargs chmod 755 find debian/libchado-perl/ -name *.tmpl | xargs chmod 644 find debian/libchado-perl/ -name *.pm | xargs chmod 644 find debian/libchado-perl/ -name *.pod | xargs rm -f find debian/libchado-perl/ -name .packlist | xargs rm -f find debian/libchado-perl/ -name "*.sql" | xargs chmod a-x chmod 755 debian/libchado-perl/usr/share/gmod/chado/soi/t/t_soi_parse_intersect chmod 755 debian/libchado-perl/usr/share/gmod/chado/src/chado/modules/audit/make_audit_ddl mv debian/tmp/usr/bin/test* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/gmod_chado* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/config* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/Auto* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/* debian/chado-utils/usr/share/gmod/chado/bin/ mv debian/tmp/usr/lib/perl5/* debian/libchado-perl/usr/share/perl5/ rm -rf debian/libchado-perl/usr/lib/perl5 mv debian/tmp/usr/man/man3 debian/libchado-perl/usr/share/man mv debian/tmp/usr/man/man1 debian/chado-utils/usr/share/man cp debian/testdb.pl debian/libchado-perl/usr/share/gmod/chado/bin/ rm -rf debian/libchado-perl/usr/share/perl5/x86_64-linux-gnu-thread-multi # Needed for runtime configure rm -rf debian/libchado-perl/usr/share/gmod/chado/lib rm -rf debian/libchado-perl/usr/bin rm -rf debian/libchado-perl/usr/lib rm -rf debian/libchado-perl/usr/share/gmod/chado/load/logs rm -rf debian/libchado-perl/usr/share/gmod/chado/tmp # Remove not required man pages for user (also contains pod2man errors and missing what-is) rm -rf debian/libchado-perl/usr/share/man # Fix perl interpreter path for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' dh_installdocs # remove installation doc find debian -name "INSTALL.Chado*" -delete make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' dh_installchangelogs -O--buildsystem=perl_makemaker dh_installexamples -O--buildsystem=perl_makemaker dh_installman -O--buildsystem=perl_makemaker dh_installinit -O--buildsystem=perl_makemaker dh_lintian -O--buildsystem=perl_makemaker dh_perl -O--buildsystem=perl_makemaker dh_link -O--buildsystem=perl_makemaker dh_strip_nondeterminism -O--buildsystem=perl_makemaker dh_compress -O--buildsystem=perl_makemaker debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/libchado-perl-1.31' dh_fixperms chmod 644 debian/libchado-perl/etc/gmod/gmod-chado.conf find debian -name create_so_bridge_command -exec chmod 644 \{\} \; find debian -name Skip_tables.pm -exec chmod 644 \{\} \; find debian -name "*.tt2" -exec chmod 644 \{\} \; find debian -name "*.tmpl" -exec chmod 644 \{\} \; make[1]: Leaving directory '/build/reproducible-path/libchado-perl-1.31' dh_missing -O--buildsystem=perl_makemaker dh_installdeb -O--buildsystem=perl_makemaker dh_gencontrol -O--buildsystem=perl_makemaker dh_md5sums -O--buildsystem=perl_makemaker dh_builddeb -O--buildsystem=perl_makemaker dpkg-deb: building package 'chado-utils' in '../chado-utils_1.31-6_all.deb'. dpkg-deb: building package 'libchado-perl' in '../libchado-perl_1.31-6_all.deb'. dpkg-genbuildinfo --build=binary -O../libchado-perl_1.31-6_armhf.buildinfo dpkg-genchanges --build=binary -O../libchado-perl_1.31-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23552 and its subdirectories I: Current time: Wed Dec 11 14:42:24 -12 2024 I: pbuilder-time-stamp: 1733971344 Thu Dec 12 02:42:41 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64z-armhf-rb.debian.net. Thu Dec 12 02:42:41 UTC 2024 I: Preparing to do remote build '2' on virt64z-armhf-rb.debian.net. Thu Dec 12 02:45:05 UTC 2024 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. Thu Dec 12 02:45:07 UTC 2024 I: libchado-perl_1.31-6_armhf.changes: Format: 1.8 Date: Thu, 05 Dec 2019 08:35:16 +0000 Source: libchado-perl Binary: chado-utils libchado-perl Architecture: all Version: 1.31-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Closes: 939832 Changes: libchado-perl (1.31-6) unstable; urgency=medium . [ Jelmer Vernooij ] * Trim trailing whitespace. * Use secure copyright file specification URI. [ Olivier Sallou ] * Fix postinstall script for case of USER env var not set (Closes: #939832) Checksums-Sha1: d93e31085eadcc3ad25fb5548cb01b124bba0986 129636 chado-utils_1.31-6_all.deb e8a7f478f04526beb6a156b7ab23bd02ebee3957 2281136 libchado-perl_1.31-6_all.deb f29b9b28296d12b76b0ae7a52a60cb73000398e0 11109 libchado-perl_1.31-6_armhf.buildinfo Checksums-Sha256: d9a2c1da042a8bb90e8abed23c0219d8abccfdb7cc4b2d27349a4984e4bb8638 129636 chado-utils_1.31-6_all.deb 07c521f3191cb93dfe3f413f0dc7c9023154e3182463303a4899342c8f437ecd 2281136 libchado-perl_1.31-6_all.deb a2fd04345535443afd42c39b08bfa7f59a2ebd1b2bb982ca7bb28db0fe6a3108 11109 libchado-perl_1.31-6_armhf.buildinfo Files: 127f06754745cefa0043f9100293118c 129636 perl optional chado-utils_1.31-6_all.deb fae243b3887ec747a9118a422da95a8e 2281136 perl optional libchado-perl_1.31-6_all.deb 3252a244e45f46f80e3c9739097333a4 11109 perl optional libchado-perl_1.31-6_armhf.buildinfo Thu Dec 12 02:45:08 UTC 2024 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_25-10848.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/libchado-perl_1.31-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/libchado-perl_1.31-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/libchado-perl_1.31-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/b1/libchado-perl_1.31-6_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.rlDhNmCq/b2/libchado-perl_1.31-6_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.363s) 0.363s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.036s) 0.036s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 668ms CPU time consumed: 661ms Thu Dec 12 02:45:10 UTC 2024 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Thu Dec 12 02:45:10 UTC 2024 I: libchado-perl from trixie built successfully and reproducibly on armhf. Thu Dec 12 02:45:11 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Dec 12 02:45:11 UTC 2024 I: Submitting 12K b1/libchado-perl_1.31-6_armhf.buildinfo.asc Thu Dec 12 02:45:12 UTC 2024 I: Submitting 12K b2/libchado-perl_1.31-6_armhf.buildinfo.asc Thu Dec 12 02:45:12 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Dec 12 02:45:12 UTC 2024 I: Done submitting .buildinfo files. Thu Dec 12 02:45:12 UTC 2024 I: Removing signed libchado-perl_1.31-6_armhf.buildinfo.asc files: removed './b1/libchado-perl_1.31-6_armhf.buildinfo.asc' removed './b2/libchado-perl_1.31-6_armhf.buildinfo.asc'