Tue Jan 28 13:31:46 UTC 2025 I: starting to build libedlib/trixie/armhf on jenkins on '2025-01-28 13:31' Tue Jan 28 13:31:46 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_11/9527/console.log Tue Jan 28 13:31:46 UTC 2025 I: Downloading source for trixie/libedlib=1.2.7-6 --2025-01-28 13:31:46-- http://deb.debian.org/debian/pool/main/libe/libedlib/libedlib_1.2.7-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2389 (2.3K) [text/prs.lines.tag] Saving to: ‘libedlib_1.2.7-6.dsc’ 0K .. 100% 366M=0s 2025-01-28 13:31:46 (366 MB/s) - ‘libedlib_1.2.7-6.dsc’ saved [2389/2389] Tue Jan 28 13:31:46 UTC 2025 I: libedlib_1.2.7-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libedlib Binary: libedlib1, libedlib-dev, edlib-aligner, python3-edlib Architecture: any Version: 1.2.7-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/Martinsos/edlib Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libedlib Vcs-Git: https://salsa.debian.org/med-team/libedlib.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, dh-sequence-python3, d-shlibs, rename, cython3, python3-all-dev, python3-setuptools Package-List: edlib-aligner deb science optional arch=any libedlib-dev deb libdevel optional arch=any libedlib1 deb libs optional arch=any python3-edlib deb python optional arch=any Checksums-Sha1: 9e3702547e7c789015df742f84b987bec43811c5 4318998 libedlib_1.2.7.orig.tar.gz 759885673bcd2b65df1e146d38ca291c0a39a68b 7604 libedlib_1.2.7-6.debian.tar.xz Checksums-Sha256: 8767bc1b04a1a67282d57662e5702c4908996e96b1753b5520921ff189974621 4318998 libedlib_1.2.7.orig.tar.gz 9658aa68789c15bfc99ca921e054f0ca22a19fe54e3f898a2081e5428a0d6c96 7604 libedlib_1.2.7-6.debian.tar.xz Files: 77917d44bfd08216f2dd4480578688c2 4318998 libedlib_1.2.7.orig.tar.gz 7671249397981f88d56c9b603579f19b 7604 libedlib_1.2.7-6.debian.tar.xz Dgit: d93b8a9602cbc0d28f1532a96d2f358266020c8f debian archive/debian/1.2.7-6 https://git.dgit.debian.org/libedlib -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmaSzNEUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqlORAAnAlDygDmsRWHr3+aK0STtazDcGkF ctHwajdxm75GHbjLFGUrpA6tjPygYUILJKkGieb19JqPKdmirYVVOyg5Ltu+WJ1h ZQWzVxESOjFSzGqP3eIziZXDnSVm+UbREzfQmjDJmTfjZMWgRUrDjhT4Q1AoWVL0 H/RuuR7JhKAvbeI5TfePhbL3WSIW1W4tHQTwat+pD610u6YrMcIVTSHs6nXBtg7e o25m5w1jv8bbhUyzhjGbie1ylE3W95cm/w+hfe8jDFTr9ddltV1gU4u3FcZNV7AG TLidtDtoVDwYtkcjMVWKrP97Gf6eyLWwzFYhVn2ts/Kv+lTyVP9IDOAwJPnewcni BBEBIyMBStYwsYmTmitTGSmX6rWckFbhfmYBwJ8xPotKptaC0o0nafpdeJeRUIFx cmrYF2egeNtjiZfvxeOwZ7H9g4UG0/dUWlGOAP4gehSunWFldcUrGLYCY8CRfIwT IsCgQBGm7nLeyAwFBI4i7YzCznXz+U9jFcwFtQ2rXdELZH3hOoAMBIsas0Uj6++O jQ4z1HBukfN97Bw5tIbKKXy6ifmcO8Fj64hwTWQsT73CfwayuYks+XvQMDBiBpgE rlt1+Te/sPPqrD8+2BmAnU0as4c/fVZobGtQhOwbopZ4bTnIB5B8jYPpZUMiYsAu eRUYoHjPHgrQ2lM= =n0hE -----END PGP SIGNATURE----- Tue Jan 28 13:31:46 UTC 2025 I: Checking whether the package is not for us Tue Jan 28 13:31:46 UTC 2025 I: Starting 1st build on remote node wbq0-armhf-rb.debian.net. Tue Jan 28 13:31:46 UTC 2025 I: Preparing to do remote build '1' on wbq0-armhf-rb.debian.net. Tue Jan 28 13:41:48 UTC 2025 I: Deleting $TMPDIR on wbq0-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jan 28 01:31:56 -12 2025 I: pbuilder-time-stamp: 1738071116 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libedlib_1.2.7-6.dsc] I: copying [./libedlib_1.2.7.orig.tar.gz] I: copying [./libedlib_1.2.7-6.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libedlib_1.2.7-6.dsc: unsupported subcommand dpkg-source: info: extracting libedlib in libedlib-1.2.7 dpkg-source: info: unpacking libedlib_1.2.7.orig.tar.gz dpkg-source: info: unpacking libedlib_1.2.7-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying cython3.patch dpkg-source: info: applying enable_shared_and_static.patch dpkg-source: info: applying really_exclude_readme.rst.patch dpkg-source: info: applying fix-package-version.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21340/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='7e4882fe2f1f4c2aae14d93607775d22' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21340' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/pbuilderrc_Mpz8 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/b1 --logfile b1/build.log libedlib_1.2.7-6.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux wbq0 6.1.0-30-armmp #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21340/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, dh-sequence-python3, d-shlibs, rename, cython3, python3-all-dev, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19568 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on rename; however: Package rename is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} cython3{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-dev{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} rename{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 109 newly installed, 0 to remove and 0 not upgraded. Need to get 62.3 MB of archives. After unpacking 238 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.13-minimal armhf 3.13.1-3 [844 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.13-minimal armhf 3.13.1-3 [1840 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.13.1-2 [27.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024b-6 [257 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libffi8 armhf 3.4.6-1 [20.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-6 [146 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libpython3.13-stdlib armhf 3.13.1-3 [1850 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf python3.13 armhf 3.13.1-3 [740 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.13.1-2 [9952 B] Get: 14 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.13.1-2 [28.0 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.8-5 [803 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.8-5 [1812 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-4 [196 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.4-1 [84.6 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-4 [723 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.31.4-2 [2267 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-4 [30.3 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.2-1 [23.3 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-4 [75.8 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 43 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-4 [285 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-4 [116 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libidn2-0 armhf 2.3.7-2+b1 [125 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8+b1 [18.6 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8+b1 [50.6 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libldap2 armhf 2.6.9+dfsg-1 [167 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libtasn1-6 armhf 4.19.0-3+b3 [43.9 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libgnutls30t64 armhf 3.8.8-2 [1370 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libcurl4t64 armhf 8.11.1-1+b1 [304 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libuv1t64 armhf 1.48.0-7 [134 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.31.4-2 [5912 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf cython3 armhf 3.0.11+dfsg-1+b1 [2812 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf d-shlibs all 0.109 [11.1 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.23 [90.6 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libtool all 2.5.4-2 [539 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get: 70 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-4 [1489 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf debhelper all 13.23 [919 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 82 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 75.6.0-1 [222 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 75.6.0-1 [720 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20250108 [113 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf libexpat1-dev armhf 2.6.4-1 [140 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 8.1.3-4 [30.4 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libpython3.13 armhf 3.13.1-3 [1869 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libpython3.13-dev armhf 3.13.1-3 [3802 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libpython3-dev armhf 3.13.1-2 [10.2 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.8-5 [1832 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libpython3.12t64 armhf 3.12.8-5 [1849 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libpython3.12-dev armhf 3.12.8-5 [3827 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libpython3-all-dev armhf 3.13.1-2 [1072 B] Get: 103 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.8-5 [677 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.13.1-2 [1056 B] Get: 105 http://deb.debian.org/debian trixie/main armhf python3.13-dev armhf 3.13.1-3 [504 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf python3-dev armhf 3.13.1-2 [26.1 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf python3.12-dev armhf 3.12.8-5 [505 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf python3-all-dev armhf 3.13.1-2 [1076 B] Get: 109 http://deb.debian.org/debian trixie/main armhf rename all 2.02-1 [21.8 kB] Fetched 62.3 MB in 5s (12.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19568 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.1-3_armhf.deb ... Unpacking libpython3.13-minimal:armhf (3.13.1-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:armhf. Preparing to unpack .../7-libpython3.13-stdlib_3.13.1-3_armhf.deb ... Unpacking libpython3.13-stdlib:armhf (3.13.1-3) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.1-3_armhf.deb ... Unpacking python3.13 (3.13.1-3) ... 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Selecting previously unselected package libpython3.12-minimal:armhf. Preparing to unpack .../01-libpython3.12-minimal_3.12.8-5_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.8-5) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../02-python3.12-minimal_3.12.8-5_armhf.deb ... Unpacking python3.12-minimal (3.12.8-5) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../03-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../04-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libedlib-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libedlib_1.2.7-6_source.changes dpkg-buildpackage: info: source package libedlib dpkg-buildpackage: info: source version 1.2.7-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' rm -rf meson-build make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' dh_auto_configure --buildsystem=cmake -- -DCMAKE_BUILD_TYPE=Release -DEDLIB_BUILD_EXAMPLES=False -DBUILD_TESTING=False -DEDLIB_OMIT_README_RST=1 -DBUILD_SHARED_LIBS=ON cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=Release -DEDLIB_BUILD_EXAMPLES=False -DBUILD_TESTING=False -DEDLIB_OMIT_README_RST=1 -DBUILD_SHARED_LIBS=ON .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Setting warning flags -- Performing Test WOLD_STYLE_CAST -- Performing Test WOLD_STYLE_CAST - Success -- Performing Test WSHADOW -- Performing Test WSHADOW - Success -- Configuring done (9.4s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY EDLIB_OMIT_README_RST FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' dh_auto_build --buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/libedlib-1.2.7 -B/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make 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CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o /usr/bin/c++ -DDLIB_BUILD -DEDLIB_SHARED -Dedlib_EXPORTS -I/build/reproducible-path/libedlib-1.2.7/edlib/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wold-style-cast -Wshadow -Wall -Wextra -pedantic -O3 -DNDEBUG -std=c++14 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o -MF CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o.d -o CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o -c /build/reproducible-path/libedlib-1.2.7/edlib/src/edlib.cpp /usr/bin/c++ -I/build/reproducible-path/libedlib-1.2.7/edlib/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat 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edlib_static make -f CMakeFiles/edlib-aligner.dir/build.make CMakeFiles/edlib-aligner.dir/depend make[4]: Entering directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libedlib-1.2.7 /build/reproducible-path/libedlib-1.2.7 /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf/CMakeFiles/edlib-aligner.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' make -f CMakeFiles/edlib-aligner.dir/build.make CMakeFiles/edlib-aligner.dir/build make[4]: Entering directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' [ 83%] Building CXX object CMakeFiles/edlib-aligner.dir/apps/aligner/aligner.cpp.o /usr/bin/c++ -I/build/reproducible-path/libedlib-1.2.7/edlib/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wold-style-cast -Wshadow -Wall -Wextra -pedantic -O3 -DNDEBUG -std=c++14 -MD -MT CMakeFiles/edlib-aligner.dir/apps/aligner/aligner.cpp.o -MF CMakeFiles/edlib-aligner.dir/apps/aligner/aligner.cpp.o.d -o CMakeFiles/edlib-aligner.dir/apps/aligner/aligner.cpp.o -c /build/reproducible-path/libedlib-1.2.7/apps/aligner/aligner.cpp [100%] Linking CXX executable bin/edlib-aligner /usr/bin/cmake -E cmake_link_script CMakeFiles/edlib-aligner.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wold-style-cast -Wshadow -Wall -Wextra -pedantic -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/edlib.dir/link.d -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libedlib.so.1 -o lib/libedlib.so.1.2.7 CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o /usr/bin/cmake -E cmake_symlink_library lib/libedlib.so.1.2.7 lib/libedlib.so.1 lib/libedlib.so make[4]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' [100%] Built target edlib /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wold-style-cast -Wshadow -Wall -Wextra -pedantic -O3 -DNDEBUG -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/edlib-aligner.dir/link.d "CMakeFiles/edlib-aligner.dir/apps/aligner/aligner.cpp.o" -o bin/edlib-aligner lib/libedlib_static.a make[4]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' [100%] Built target edlib-aligner make[3]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' # /usr/bin/make --directory=bindings/python EDLIB_OMIT_README_RST=1 /usr/bin/make --directory=bindings/python edlib pyedlib.bycython.cpp make[2]: Entering directory '/build/reproducible-path/libedlib-1.2.7/bindings/python' # create a clean (maybe updated) copy of edlib src rm -rf edlib && cp -r ../../edlib . cython3 --cplus edlib.pyx -o edlib.bycython.cpp /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/libedlib-1.2.7/bindings/python/edlib.pyx tree = Parsing.p_module(s, pxd, full_module_name) make[2]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/bindings/python' EDLIB_OMIT_README_RST=1 dh_auto_build --buildsystem=pybuild -- --dir bindings/python I: pybuild base:311: /usr/bin/python3.12 setup.py build running build running build_ext building 'edlib' extension creating build/temp.linux-armv7l-cpython-312 creating build/temp.linux-armv7l-cpython-312/edlib/src arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iedlib/include -I/usr/include/python3.12 -c edlib.bycython.cpp -o build/temp.linux-armv7l-cpython-312/edlib.bycython.o -O3 -std=c++11 arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iedlib/include -I/usr/include/python3.12 -c edlib/src/edlib.cpp -o build/temp.linux-armv7l-cpython-312/edlib/src/edlib.o -O3 -std=c++11 arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-312/edlib.bycython.o build/temp.linux-armv7l-cpython-312/edlib/src/edlib.o -L/usr/lib/arm-linux-gnueabihf -o /build/reproducible-path/libedlib-1.2.7/.pybuild/cpython3_3.12_edlib/build/edlib.cpython-312-arm-linux-gnueabihf.so I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_ext building 'edlib' extension creating build/temp.linux-armv7l-cpython-313 creating build/temp.linux-armv7l-cpython-313/edlib/src arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iedlib/include -I/usr/include/python3.13 -c edlib.bycython.cpp -o build/temp.linux-armv7l-cpython-313/edlib.bycython.o -O3 -std=c++11 arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iedlib/include -I/usr/include/python3.13 -c edlib/src/edlib.cpp -o build/temp.linux-armv7l-cpython-313/edlib/src/edlib.o -O3 -std=c++11 arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/libedlib-1.2.7=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/edlib.bycython.o build/temp.linux-armv7l-cpython-313/edlib/src/edlib.o -L/usr/lib/arm-linux-gnueabihf -o /build/reproducible-path/libedlib-1.2.7/.pybuild/cpython3_3.13_edlib/build/edlib.cpython-313-arm-linux-gnueabihf.so make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' `find . -name edlib-aligner -type f -executable` -p apps/aligner/test_data/query.fasta apps/aligner/test_data/target.fasta Using NW alignment mode. Reading queries... Read 1 queries, 110 residues total. Reading target fasta file... Read target, 109 residues. Comparing queries to target... Query #0 (110 residues): score = 17 T: MMEEERFAASADEIFHVTQEVC-RTASELTESESRNVIVDELFCVGVTEM (0 - 48) ||||||| | |||||||||| ||||||||||||||||||||||||||| Q: MMEEERFKA---EIFHVTQEVCNRTASELTESESRNVIVDELFCVGVTEM (0 - 46) T: VAEQIRVLAKDIEA---HA-RKTVQPQDVLDDLCCRRNEGL-EIINNF-K (49 - 92) | |||||||||||| || |||||||||| ||||||||| |||||| | Q: VWEQIRVLAKDIEAFAEHAGRKTVQPQDVL--LCCRRNEGLYEIINNFHK (47 - 94) T: AESIKSKKKKKE-STTB (93 - 108) ||||||||||| ||| Q: -ESIKSKKKKKENSTT- (94 - 109) Cpu time of searching: 0.000688 `find . -name runTests` make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' dh_auto_install --buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/libedlib-1.2.7/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/libedlib-1.2.7 -B/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/edlib-1.pc -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/edlib/edlib-config.cmake -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/edlib/edlib-config-version.cmake -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/edlib/edlib-targets.cmake -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/edlib/edlib-targets-release.cmake -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so.1.2.7 -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so.1 -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib_static.a -- Installing: /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/include/edlib.h make[2]: Leaving directory '/build/reproducible-path/libedlib-1.2.7/obj-arm-linux-gnueabihf' dh_auto_install --buildsystem=pybuild -- --dir bindings/python I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_ext running install_lib creating /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.12/dist-packages copying /build/reproducible-path/libedlib-1.2.7/.pybuild/cpython3_3.12_edlib/build/edlib.cpython-312-arm-linux-gnueabihf.so -> /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.12/dist-packages running install_egg_info running egg_info creating edlib.egg-info writing edlib.egg-info/PKG-INFO writing dependency_links to edlib.egg-info/dependency_links.txt writing top-level names to edlib.egg-info/top_level.txt writing manifest file 'edlib.egg-info/SOURCES.txt' reading manifest file 'edlib.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'edlib.egg-info/SOURCES.txt' Copying edlib.egg-info to /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.12/dist-packages/edlib-1.3.8.post2.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_ext running install_lib creating /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.13/dist-packages copying /build/reproducible-path/libedlib-1.2.7/.pybuild/cpython3_3.13_edlib/build/edlib.cpython-313-arm-linux-gnueabihf.so -> /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.13/dist-packages running install_egg_info running egg_info writing edlib.egg-info/PKG-INFO writing dependency_links to edlib.egg-info/dependency_links.txt writing top-level names to edlib.egg-info/top_level.txt reading manifest file 'edlib.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'edlib.egg-info/SOURCES.txt' Copying edlib.egg-info to /build/reproducible-path/libedlib-1.2.7/debian/python3-edlib/usr/lib/python3.13/dist-packages/edlib-1.3.8.post2.egg-info Skipping SOURCES.txt running install_scripts make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/libedlib-1.2.7' dh_install file-rename 's/_static\.a/.a/' `find debian -name libedlib_static.a` d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev debian/tmp/usr/lib/*/cmake usr/lib/arm-linux-gnueabihf \ --movedev debian/tmp/usr/lib/*/pkgconfig usr/lib/arm-linux-gnueabihf \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libedlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libedlib1/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.a debian/libedlib-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so debian/libedlib-dev/usr/lib/arm-linux-gnueabihf mv /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so.1 debian/libedlib1/usr/lib/arm-linux-gnueabihf mv /build/reproducible-path/libedlib-1.2.7/debian/tmp/usr/lib/arm-linux-gnueabihf/libedlib.so.1.2.7 debian/libedlib1/usr/lib/arm-linux-gnueabihf PKGDEV=libedlib-dev PKGSHL=libedlib1 install -d -m 755 debian/libedlib-dev/usr/include mv debian/tmp/usr/include/edlib.h debian/libedlib-dev/usr/include install -d -m 755 debian/libedlib-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/cmake debian/libedlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libedlib-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig debian/libedlib-dev/usr/lib/arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/libedlib-1.2.7' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: debian/libedlib1/DEBIAN/symbols doesn't match completely debian/libedlib1.symbols --- debian/libedlib1.symbols (libedlib1_1.2.7-6_armhf) +++ dpkg-gensymbols9YDhkY 2025-01-28 01:40:56.785197367 -1200 @@ -1,8 +1,8 @@ libedlib.so.1 libedlib1 #MINVER# * Build-Depends-Package: libedlib-dev - (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 1.2.4 - (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 1.2.4 - (optional)_ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 1.2.3 +#MISSING: 1.2.7-6# (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJRKcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 1.2.4 +#MISSING: 1.2.7-6# (optional)_ZNSt6vectorIcSaIcEE17_M_realloc_insertIJcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base 1.2.4 +#MISSING: 1.2.7-6# (optional)_ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 1.2.3 edlibAlign@Base 1.2.3 edlibAlignmentToCigar@Base 1.2.3 edlibDefaultAlignConfig@Base 1.2.3 dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libedlib-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libedlib1' in '../libedlib1_1.2.7-6_armhf.deb'. dpkg-deb: building package 'edlib-aligner' in '../edlib-aligner_1.2.7-6_armhf.deb'. dpkg-deb: building package 'python3-edlib-dbgsym' in '../python3-edlib-dbgsym_1.2.7-6_armhf.deb'. dpkg-deb: building package 'libedlib1-dbgsym' in '../libedlib1-dbgsym_1.2.7-6_armhf.deb'. dpkg-deb: building package 'edlib-aligner-dbgsym' in '../edlib-aligner-dbgsym_1.2.7-6_armhf.deb'. dpkg-deb: building package 'libedlib-dev' in '../libedlib-dev_1.2.7-6_armhf.deb'. dpkg-deb: building package 'python3-edlib' in '../python3-edlib_1.2.7-6_armhf.deb'. dpkg-genbuildinfo --build=binary -O../libedlib_1.2.7-6_armhf.buildinfo dpkg-genchanges --build=binary -O../libedlib_1.2.7-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21340 and its subdirectories I: Current time: Tue Jan 28 01:41:38 -12 2025 I: pbuilder-time-stamp: 1738071698 Tue Jan 28 13:41:51 UTC 2025 I: 1st build successful. Starting 2nd build on remote node virt64b-armhf-rb.debian.net. Tue Jan 28 13:41:51 UTC 2025 I: Preparing to do remote build '2' on virt64b-armhf-rb.debian.net. Tue Jan 28 13:48:25 UTC 2025 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. Tue Jan 28 13:48:27 UTC 2025 I: libedlib_1.2.7-6_armhf.changes: Format: 1.8 Date: Sat, 13 Jul 2024 20:49:11 +0200 Source: libedlib Binary: edlib-aligner edlib-aligner-dbgsym libedlib-dev libedlib1 libedlib1-dbgsym python3-edlib python3-edlib-dbgsym Architecture: armhf Version: 1.2.7-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: edlib-aligner - edlib sequence alignment tool using edit distance libedlib-dev - library for sequence alignment using edit distance (devel) libedlib1 - library for sequence alignment using edit distance python3-edlib - library for sequence alignment using edit distance (Python3 modul Closes: 1015484 1075164 Changes: libedlib (1.2.7-6) unstable; urgency=medium . * d/libedlib1.symbols: mark symbols leaked by the compiler as optional. (Closes: #1015484, #1075164) * d/rules: always run LTO builds. * d/control: add myself to uploaders. * d/control: declare compliance to standards version 4.7.0. Checksums-Sha1: dcf581f04a2f8a7d6e6cbe4ab412716fdae98d17 112440 edlib-aligner-dbgsym_1.2.7-6_armhf.deb 7988da5498bd6916fcba930dbc0920d80da118ba 20744 edlib-aligner_1.2.7-6_armhf.deb 0d505812ed06d15a1b9a4fa3ffbcf1176d5b4665 20368 libedlib-dev_1.2.7-6_armhf.deb 7a1110f1fa73193d55ba2acf530aadaa7bc243e6 76252 libedlib1-dbgsym_1.2.7-6_armhf.deb 14298342c0c56f31faaf1309e8734b516e3fddea 15184 libedlib1_1.2.7-6_armhf.deb 83aacd2f33825a2ba8acda29cf8ca2a69533a10f 9099 libedlib_1.2.7-6_armhf.buildinfo aef9cd0b52872ea75513d7a1fc6b7d1e55960b65 581648 python3-edlib-dbgsym_1.2.7-6_armhf.deb 41e9d7382383eb1f4d4577006fa2b9967c912958 85580 python3-edlib_1.2.7-6_armhf.deb Checksums-Sha256: 8e575367967c58b36c6289a960e7d9a171d133c5b33c8b7c7f499bb417920e09 112440 edlib-aligner-dbgsym_1.2.7-6_armhf.deb 9e6ecc6d47549a0c4b66650a177cfe4b5203d1f98f8892040666a4de45cff5be 20744 edlib-aligner_1.2.7-6_armhf.deb 909aef0957b192ebd96b7ba1ec392b255d244d16ddb8834c3e5cf57e94a80c43 20368 libedlib-dev_1.2.7-6_armhf.deb fd97d3d31f9727f6216dca7dc5f7f4fd9a48834e6de22ac02979a5cb84390b4e 76252 libedlib1-dbgsym_1.2.7-6_armhf.deb 8a12c1ff5736018a3d45792d2a7311e3c60d0d68709a0ac494ea3356d692541f 15184 libedlib1_1.2.7-6_armhf.deb 8ac6c88e6331d9bde8d01dfd1a3902b16fca7a614c7719bba6f4ee0efb508e81 9099 libedlib_1.2.7-6_armhf.buildinfo e3de6f17f7c1aecaa2fd2394cd9599e79f74255c82bfb67165254da2d507402e 581648 python3-edlib-dbgsym_1.2.7-6_armhf.deb 906b00a79e87a69c9aaa0a35f965d03baee6d14badf34ccaf7a35228adb04230 85580 python3-edlib_1.2.7-6_armhf.deb Files: a7462790cc0c3ece8ef713f0ded2815a 112440 debug optional edlib-aligner-dbgsym_1.2.7-6_armhf.deb d70f9a1c9bf78c14e8c6b9fd530e7c71 20744 science optional edlib-aligner_1.2.7-6_armhf.deb 7c7e0015ba07a152b60288302676ab06 20368 libdevel optional libedlib-dev_1.2.7-6_armhf.deb 3fd7c67caeb5174cb043f642b39b0359 76252 debug optional libedlib1-dbgsym_1.2.7-6_armhf.deb bc007a827f276ca0096e5cb75c5adcb0 15184 libs optional libedlib1_1.2.7-6_armhf.deb db22a539572e1de7516cf743b617ab32 9099 science optional libedlib_1.2.7-6_armhf.buildinfo cb6c5559a97677c8d3dda8f2bd55d50d 581648 debug optional python3-edlib-dbgsym_1.2.7-6_armhf.deb 8244132dc4f06442d242c8c14e2613f1 85580 python optional python3-edlib_1.2.7-6_armhf.deb Tue Jan 28 13:48:28 UTC 2025 I: diffoscope 286 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_11-9527.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/libedlib_1.2.7-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/libedlib_1.2.7-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/libedlib_1.2.7-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/b1/libedlib_1.2.7-6_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.NAzrYoD9/b2/libedlib_1.2.7-6_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 233ms CPU time consumed: 226ms Tue Jan 28 13:48:29 UTC 2025 I: diffoscope 286 found no differences in the changes files, and a .buildinfo file also exists. Tue Jan 28 13:48:29 UTC 2025 I: libedlib from trixie built successfully and reproducibly on armhf. Tue Jan 28 13:48:30 UTC 2025 I: Submitting .buildinfo files to external archives: Tue Jan 28 13:48:30 UTC 2025 I: Submitting 12K b1/libedlib_1.2.7-6_armhf.buildinfo.asc Tue Jan 28 13:48:31 UTC 2025 I: Submitting 12K b2/libedlib_1.2.7-6_armhf.buildinfo.asc Tue Jan 28 13:48:32 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Jan 28 13:48:32 UTC 2025 I: Done submitting .buildinfo files. Tue Jan 28 13:48:32 UTC 2025 I: Removing signed libedlib_1.2.7-6_armhf.buildinfo.asc files: removed './b1/libedlib_1.2.7-6_armhf.buildinfo.asc' removed './b2/libedlib_1.2.7-6_armhf.buildinfo.asc'