Thu Jan 23 13:31:16 UTC 2025 I: starting to build packmol/trixie/armhf on jenkins on '2025-01-23 13:30' Thu Jan 23 13:31:16 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_9/12111/console.log Thu Jan 23 13:31:16 UTC 2025 I: Downloading source for trixie/packmol=1:20.14.3-1 --2025-01-23 13:31:17-- http://deb.debian.org/debian/pool/main/p/packmol/packmol_20.14.3-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1927 (1.9K) [text/prs.lines.tag] Saving to: ‘packmol_20.14.3-1.dsc’ 0K . 100% 309M=0s 2025-01-23 13:31:17 (309 MB/s) - ‘packmol_20.14.3-1.dsc’ saved [1927/1927] Thu Jan 23 13:31:17 UTC 2025 I: packmol_20.14.3-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: packmol Binary: packmol Architecture: any Version: 1:20.14.3-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: http://m3g.iqm.unicamp.br/packmol/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/packmol Vcs-Git: https://salsa.debian.org/debichem-team/packmol.git Build-Depends: debhelper-compat (= 13), cmake, gfortran Package-List: packmol deb science optional arch=any Checksums-Sha1: 846f3bb61936da6270ccd70c3f4573db104e9db5 102530 packmol_20.14.3.orig.tar.gz 159c592942d9098810cec46225073710d7d3aa06 2904 packmol_20.14.3-1.debian.tar.xz Checksums-Sha256: c70d8dff6f983adb854cf816df3d4a389b5cc724e70a2430b54793051eaaa4e9 102530 packmol_20.14.3.orig.tar.gz 51163fa0e9701294d31cf114236cdf9e6027239b59036b4fa17b79ee9448d7a6 2904 packmol_20.14.3-1.debian.tar.xz Files: 6a3128e4d2ccdf299ae9a807128be9d6 102530 packmol_20.14.3.orig.tar.gz 57a3d64f80e0a661711887a45f311627 2904 packmol_20.14.3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmXSYCwACgkQVz7x5L1a AfrMyA//X874Q5yJjx3m0DF6zSD57gB45yuqmj1unX8UsduCeLU+3MCXfHA4XjbF tf4WcBi/uMSNU7xL+Zrm2SsbDiqV8td6lq933rfS626PtjD7vk3yEbTZg1Yni1Ap pSX0gzSx4hraxgENb/IvkJcIBg6yDUSe0RbQvPFf/eIG7hGUgJpuppdy5jsz2PuB yqBKYudfnjUGfmPHUh6zBXxScNfTTk6fy0yqhDG1bGxofgH0xtjlDN7yul/g1WnY eFE5SlvECW76NBFMyALEqMsVk7NsemY8xPmi1zL76vtF64uauW6bKII/zrhDwaNg 2J/ZmwL+riG2qdCh1QaL54/pXDuVnlTC01gJFAcbCuajVmZD/hBepHfdnPVB1J0P k0EDNXu1UONRfYJE60zKT+G6ZI0q5QkjZw17wxZuoTXn9TO7spxwqUSh9xsPDmxD EebvnBoHQdtOQTWb8GDZkAhuFAhgH2ckbPh+lFPtiT3xMuEf+W+6kEedFiS7gBXq 833QDm3i2kYHUPk9/hpPBe097jnFCr26olvT8oE+AFiWYa5NDfOx0yMb5HPfz5nM 0sgjflQrlF+ZeD9v847zM0Q7gcjxrdRxF26P+AQIlKZDNTA3rKeS2KThQTen4iIb f2Ai7VlMCZ8sXjqls/ci+4X8HDuR0IYDxhEXIJ9lFVXV9M/4kGM= =TCx1 -----END PGP SIGNATURE----- Thu Jan 23 13:31:17 UTC 2025 I: Checking whether the package is not for us Thu Jan 23 13:31:17 UTC 2025 I: Starting 1st build on remote node virt32a-armhf-rb.debian.net. Thu Jan 23 13:31:17 UTC 2025 I: Preparing to do remote build '1' on virt32a-armhf-rb.debian.net. Thu Jan 23 13:40:26 UTC 2025 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 23 01:31:24 -12 2025 I: pbuilder-time-stamp: 1737639084 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.14.3-1.dsc] I: copying [./packmol_20.14.3.orig.tar.gz] I: copying [./packmol_20.14.3-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.3-1.dsc: unsupported subcommand dpkg-source: info: extracting packmol in packmol-20.14.3 dpkg-source: info: unpacking packmol_20.14.3.orig.tar.gz dpkg-source: info: unpacking packmol_20.14.3-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21278/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='bd85aaff2130437097b0ce2f53b045c5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21278' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/pbuilderrc_LVA4 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/b1 --logfile b1/build.log packmol_20.14.3-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32a 6.1.0-30-armmp-lpae #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21278/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 65 newly installed, 0 to remove and 0 not upgraded. Need to get 42.4 MB of archives. After unpacking 147 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-4 [196 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.4-1 [84.6 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-4 [723 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.31.4-2 [2267 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.2-1 [23.3 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 27 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libidn2-0 armhf 2.3.7-2+b1 [125 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8+b1 [18.6 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8+b1 [50.6 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libldap2 armhf 2.6.9+dfsg-1 [167 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libffi8 armhf 3.4.6-1 [20.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libtasn1-6 armhf 4.19.0-3+b3 [43.9 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libgnutls30t64 armhf 3.8.8-2 [1370 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libcurl4t64 armhf 8.11.1-1+b1 [304 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libuv1t64 armhf 1.48.0-7 [134 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.31.4-2 [5912 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.23 [90.6 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libtool all 2.5.4-2 [539 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-4 [1489 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf debhelper all 13.23 [919 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-12 [263 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libgfortran-14-dev armhf 14.2.0-12 [317 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-12 [8720 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf gfortran-14 armhf 14.2.0-12 [13.4 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1 [1288 B] Get: 65 http://deb.debian.org/debian trixie/main armhf gfortran armhf 4:14.2.0-1 [1428 B] Fetched 42.4 MB in 2s (28.1 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-4_armhf.deb ... Unpacking gettext-base (0.22.5-4) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_armhf.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.4-1_armhf.deb ... Unpacking bsdextrautils (2.40.4-1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-5_armhf.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... 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I: Building the package I: Running cd /build/reproducible-path/packmol-20.14.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../packmol_20.14.3-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.14.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The Fortran compiler identification is GNU 14.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done (6.8s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf dh_auto_build -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.14.3 -B/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' cd /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/packmol-20.14.3 /build/reproducible-path/packmol-20.14.3 /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake "--color=" Dependee "/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/depend.internal". 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Scanning dependencies of target packmol make[3]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build make[3]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' [ 2%] Building Fortran object CMakeFiles/packmol.dir/src/ahestetic.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/ahestetic.f90 -o CMakeFiles/packmol.dir/src/ahestetic.f90.o [ 5%] Building Fortran object CMakeFiles/packmol.dir/src/sizes.f90.o [ 7%] Building Fortran object CMakeFiles/packmol.dir/src/exit_codes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/sizes.f90 -o CMakeFiles/packmol.dir/src/sizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/exit_codes.f90 -o CMakeFiles/packmol.dir/src/exit_codes.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/swaptypemod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/swaptypemod.f90 -o CMakeFiles/packmol.dir/src/swaptypemod.f90.o [ 12%] Building Fortran object CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o [ 15%] Building Fortran object CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gencan.f -o CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gencan_ieee_signal_routines.f90 -o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o /build/reproducible-path/packmol-20.14.3/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:40: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:33: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:12: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2592:71: 2592 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3827:61: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3827:54: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2989:19: 2989 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5187:19: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:52: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:56: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5187:12: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:71: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:64: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:31: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3244:67: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3244:71: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3245:21: 3245 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3354:72: 3354 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3246:24: 3246 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3502:72: 3502 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:42: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3503:72: 3503 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:49: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3651:72: 3651 | rbdind = rbdposaind | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3242:56: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposaind' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3658:14: 3658 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3242:68: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here [ 17%] Building Fortran object CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/setibox.f90 -o CMakeFiles/packmol.dir/src/setibox.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/flashsort.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/flashsort.f90 -o CMakeFiles/packmol.dir/src/flashsort.f90.o [ 22%] Building Fortran object CMakeFiles/packmol.dir/src/jacobi.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o [ 25%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU [ 27%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build [ 30%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU [ 32%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o [ 35%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o [ 37%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 40%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /build/reproducible-path/packmol-20.14.3/src/gencan.f:2140:72: 2140 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:2312:35: 2312 | if ( iter .eq. 1 .or. sty .le. 0.0d0 ) then | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU [ 42%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 45%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o [ 47%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 50%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o [ 52%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o [ 55%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o /build/reproducible-path/packmol-20.14.3/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here [ 57%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o [ 60%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 62%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [ 65%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o /build/reproducible-path/packmol-20.14.3/src/output.f90:572:32: 572 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here [ 67%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 70%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 72%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 75%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 77%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o /build/reproducible-path/packmol-20.14.3/app/packmol.f90:346:44: 346 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here [ 80%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 85%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o [ 90%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o [ 95%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/packmol.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' [100%] Built target packmol make[2]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/packmol-20.14.3/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.14.3 -B/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/packmol-20.14.3/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.14.3-1_armhf.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.3-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.14.3-1_armhf.buildinfo dpkg-genchanges --build=binary -O../packmol_20.14.3-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21278 and its subdirectories I: Current time: Thu Jan 23 01:40:12 -12 2025 I: pbuilder-time-stamp: 1737639612 Thu Jan 23 13:40:31 UTC 2025 I: 1st build successful. Starting 2nd build on remote node virt64z-armhf-rb.debian.net. Thu Jan 23 13:40:31 UTC 2025 I: Preparing to do remote build '2' on virt64z-armhf-rb.debian.net. Thu Jan 23 13:42:27 UTC 2025 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. Thu Jan 23 13:42:30 UTC 2025 I: packmol_20.14.3-1_armhf.changes: Format: 1.8 Date: Sun, 18 Feb 2024 20:46:27 +0100 Source: packmol Binary: packmol packmol-dbgsym Architecture: armhf Version: 1:20.14.3-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: packmol - Initial configurations for Molecular Dynamics Simulations Changes: packmol (1:20.14.3-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 07746e6119a5e60db4fd8f6abe155a5e1707bc73 130192 packmol-dbgsym_20.14.3-1_armhf.deb 69d2575b5c8eec1005829f0283e1f155d68dd52c 6033 packmol_20.14.3-1_armhf.buildinfo 19ca0cc3793b432412a684c5d16df7b9ba1a3b02 109176 packmol_20.14.3-1_armhf.deb Checksums-Sha256: b11be8867c26e74239da878a99eeafd6721f7ac61a43285f8385ebdbb672e213 130192 packmol-dbgsym_20.14.3-1_armhf.deb 216ea43c206eb774068436c099ce29a4f6b0fed23c398bd3e6f541dc2bc16fe5 6033 packmol_20.14.3-1_armhf.buildinfo ed83ac5ad9e274279c6acbb9f0c1ba6a0b94f772c45c671e964c9b2abf7800b5 109176 packmol_20.14.3-1_armhf.deb Files: 0186adf3d040458e6962255f1ab8c1c9 130192 debug optional packmol-dbgsym_20.14.3-1_armhf.deb 81d2688c43dc8c03083591df119e2e70 6033 science optional packmol_20.14.3-1_armhf.buildinfo d5126e75f4b70390e4205837752a6e27 109176 science optional packmol_20.14.3-1_armhf.deb Thu Jan 23 13:42:31 UTC 2025 I: diffoscope 285 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_9-12111.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/packmol_20.14.3-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/packmol_20.14.3-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/packmol_20.14.3-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/b1/packmol_20.14.3-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.VeW1FzZb/b2/packmol_20.14.3-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.318s) 0.318s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.015s) 0.015s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 596ms CPU time consumed: 596ms Thu Jan 23 13:42:32 UTC 2025 I: diffoscope 285 found no differences in the changes files, and a .buildinfo file also exists. Thu Jan 23 13:42:32 UTC 2025 I: packmol from trixie built successfully and reproducibly on armhf. Thu Jan 23 13:42:33 UTC 2025 I: Submitting .buildinfo files to external archives: Thu Jan 23 13:42:33 UTC 2025 I: Submitting 8.0K b1/packmol_20.14.3-1_armhf.buildinfo.asc Thu Jan 23 13:42:33 UTC 2025 I: Submitting 8.0K b2/packmol_20.14.3-1_armhf.buildinfo.asc Thu Jan 23 13:42:34 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jan 23 13:42:34 UTC 2025 I: Done submitting .buildinfo files. Thu Jan 23 13:42:34 UTC 2025 I: Removing signed packmol_20.14.3-1_armhf.buildinfo.asc files: removed './b1/packmol_20.14.3-1_armhf.buildinfo.asc' removed './b2/packmol_20.14.3-1_armhf.buildinfo.asc'