Mon Dec 30 14:28:49 UTC 2024 I: starting to build fenicsx-performance-tests/trixie/i386 on jenkins on '2024-12-30 14:28' Mon Dec 30 14:28:49 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_3/49901/console.log Mon Dec 30 14:28:49 UTC 2024 I: Downloading source for trixie/fenicsx-performance-tests=0.9.0-2 --2024-12-30 14:28:49-- http://deb.debian.org/debian/pool/main/f/fenicsx-performance-tests/fenicsx-performance-tests_0.9.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2467 (2.4K) [text/prs.lines.tag] Saving to: ‘fenicsx-performance-tests_0.9.0-2.dsc’ 0K .. 100% 400M=0s 2024-12-30 14:28:49 (400 MB/s) - ‘fenicsx-performance-tests_0.9.0-2.dsc’ saved [2467/2467] Mon Dec 30 14:28:49 UTC 2024 I: fenicsx-performance-tests_0.9.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fenicsx-performance-tests Binary: fenicsx-performance-tests, fenicsx-performance-tests-source Architecture: any all Version: 0.9.0-2 Maintainer: Debian Science Maintainers Uploaders: Drew Parsons , Francesco Ballarin Homepage: https://github.com/FEniCS/performance-test Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests Vcs-Git: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@ Build-Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.9~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx Package-List: fenicsx-performance-tests deb libdevel optional arch=any fenicsx-performance-tests-source deb libdevel optional arch=all Checksums-Sha1: 0bae6b5b5310de362337f147f3308ab4b450f7cb 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz e42689299be073e6bcdecbdc72343b665b2e4fea 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz Checksums-Sha256: d7d39eb7e8964658687ef2240ad79e43392ceaa8c17117bd641b97a726c7d111 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz 6f391125ffb809beae151e8c8411547f5f2fd9627153e1d72396ec1fdc7db738 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz Files: e6427a2c02c8364c21d3f31ffafff18b 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz 6a309742bcdb49f72d3fbf49a21e57ad 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEG10EseUHu/A2aeK4AfNfwz5zr4wFAmcwyAAACgkQAfNfwz5z r4x6+A//d1iYy+wPAYtjIKSLh9RaULqBLOmwY3Gx/WxLSOHvFl2kl6MJmdsPxK9A 31w4hnGNADDYJkTRi9RL1qif7ID+SGLwoFBYvOZVgL0MOVajshwPLMJZeJSRZ03s ojSrH7p90LLXSHE+OgWdDy1XKE9RtB2gmg8gDhmQeTuTOa5Ck+gDrtFCvQQm8RU7 OfBIMsdr6nhcoSkRIUM9nD4Ip+lSyxBmHphVYs46nQkHuBvPfksTGjs0n15J4ist nfXPvkCQcK5jfHbPt0GYZccSFnQkOr1YQDBIGiSwqFI5zazc5Txi2U0cnagmblm9 Y/L9dwkIIRxBzTzBchyN9nifjBtXN2KxWf6YERnTRoCvYSg5JAp8th/MCsGvIS1P t5swOLTHrG+AMVSOrLnleGmqUh6Wqtq6N7/aO50ErWIZqUZM+EZMhH4fDdA9rBfw W56rls4DqqG4q9L5gNJBD+Mb+JxBnrSxTmYmql5FOI8S4/cej8lQr9jcKxSwFD04 vzldYbl8Vx89GZa4qe1wV7Hbj/izvyCjZ+F79PaV1GQ/l8N/hi66vT/yOZOtAdGD BQ5kLlmAiz30kB6xAC/uNaUpdJ9SBUO0WKj/NiaQ9Wnwu2fxzUR2x6hieqrKKECe +77pX4mAdODktGwapB3Vh7rX/ukItzSycNnQzaNmNJj8uOpDLcs= =6WIY -----END PGP SIGNATURE----- Mon Dec 30 14:28:49 UTC 2024 I: Checking whether the package is not for us Mon Dec 30 14:28:49 UTC 2024 I: Starting 1st build on remote node ionos2-i386.debian.net. Mon Dec 30 14:28:49 UTC 2024 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Mon Dec 30 14:31:57 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 30 02:28:51 -12 2024 I: pbuilder-time-stamp: 1735568931 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fenicsx-performance-tests_0.9.0-2.dsc] I: copying [./fenicsx-performance-tests_0.9.0.orig.tar.gz] I: copying [./fenicsx-performance-tests_0.9.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 14:49:36 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.9.0-2.dsc: no acceptable signature found dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.9.0 dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6670/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='dae4bc64d83448419a69cd0e1af34e98' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6670' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/pbuilderrc_X0f2 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/b1 --logfile b1/build.log fenicsx-performance-tests_0.9.0-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/6670/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.9~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.16~); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev (>= 1.70~); however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 1:0.9~); however: Package libdolfinx-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-real-dev; however: Package libdolfinx-real-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx; however: Package python3-ffcx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} catch2{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} hwloc-nox{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libamd3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcamd3{a} libcatch2-dev{a} libccolamd3{a} libcholmod5{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real0.9{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libgfortran-14-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libhdf5-mpi-dev{a} libhdf5-mpich-310{a} libhdf5-mpich-cpp-310{a} libhdf5-mpich-dev{a} libhdf5-mpich-fortran-310{a} libhdf5-mpich-hl-310{a} libhdf5-mpich-hl-cpp-310{a} libhdf5-mpich-hl-fortran-310{a} libhwloc-dev{a} libhwloc15{a} libhypre-2.32.0{a} libhypre-dev{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmpich-dev{a} libmpich12{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libp11-kit-dev{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpetsc-real3.22{a} libpetsc-real3.22-dev{a} libpetsc3.22-dev-common{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librbio4{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-mpich-dev{a} libscalapack-mpich2.2{a} libscotch-7.0{a} libscotch-dev{a} libslepc-real3.22{a} libslepc-real3.22-dev{a} libslurm42t64{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsz2{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxml2{a} libxml2-dev{a} libyaml-0-2{a} libyaml-dev{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} mpich{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-autocommand{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-dev{a} python3-ffcx{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufl{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} valgrind{a} valgrind-mpi{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl gdb javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libgl-dev libgraphblas-dev libhwloc-plugins libldap-common libmail-sendmail-perl libpetsc3.22-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix wget zsh 0 packages upgraded, 293 newly installed, 0 to remove and 0 not upgraded. Need to get 215 MB of archives. After unpacking 1007 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.8-3 [816 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.8-3 [2239 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.8-1 [26.9 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.2~rc1-2 [24.0 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 12 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-6 [69.4 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.8-3 [1968 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.8-3 [677 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.8-1 [9792 B] Get: 22 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.8-1 [27.9 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-6 [65.7 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-6 [876 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-3 [201 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-6 [1198 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-12 [95.9 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-3 [723 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libcatch2-dev i386 3.7.1-0.4 [652 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 catch2 all 3.7.1-0.4 [5052 B] Get: 42 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.30.5-1 [2223 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8 [20.6 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-8 [61.0 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.19+dfsg-1 [200 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.11.1-1 [393 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libuv1t64 i386 1.48.0-7 [157 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 cmake i386 3.30.5-1 [12.5 MB] Get: 59 http://deb.debian.org/debian trixie/main i386 comerr-dev i386 2.1-1.47.2~rc1-2 [55.9 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 66 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-3 [1631 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-8 [735 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 libgfortran-14-dev i386 14.2.0-8 [800 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-8 [12.5 MB] Get: 76 http://deb.debian.org/debian trixie/main i386 gfortran-14 i386 14.2.0-8 [12.2 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 gfortran-i686-linux-gnu i386 4:14.2.0-1 [1280 B] Get: 78 http://deb.debian.org/debian trixie/main i386 gfortran i386 4:14.2.0-1 [1432 B] Get: 79 http://deb.debian.org/debian trixie/main i386 libhwloc15 i386 2.11.2-1 [177 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 hwloc-nox i386 2.11.2-1 [229 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-5+b1 [218 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libgssrpc4t64 i386 1.21.3-3 [63.1 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libkadm5clnt-mit12 i386 1.21.3-3 [43.2 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libkdb5-10t64 i386 1.21.3-3 [45.1 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 libkadm5srv-mit12 i386 1.21.3-3 [57.0 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 krb5-multidev i386 1.21.3-3 [126 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1+b1 [25.0 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1+b1 [8128 B] Get: 89 http://deb.debian.org/debian trixie/main i386 libaec-dev i386 1.1.3-1+b1 [23.0 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libsuitesparseconfig7 i386 1:7.8.3+dfsg-2 [24.0 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libamd3 i386 1:7.8.3+dfsg-2 [43.5 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-4 [143 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-4 [2194 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 libarpack2t64 i386 3.9.1-4 [102 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libblas-dev i386 3.12.0-4 [155 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 liblapack-dev i386 3.12.0-4 [4452 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 libarpack2-dev i386 3.9.1-4 [122 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libbasix0.9 i386 0.9.0-2+b1 [440 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-4 [26.2 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libbasix-dev i386 0.9.0-2+b1 [67.2 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-4 [10.6 MB] Get: 105 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83.0 i386 1.83.0-4 [234 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83-dev i386 1.83.0-4 [235 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 libboost-chrono1.83.0t64 i386 1.83.0-4 [241 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libboost-chrono1.83-dev i386 1.83.0-4 [247 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libboost-chrono-dev i386 1.83.0.2+b2 [4228 B] Get: 110 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83.0 i386 1.83.0-4 [230 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83.0 i386 1.83.0-4 [343 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83-dev i386 1.83.0-4 [386 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83-dev i386 1.83.0-4 [239 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 115 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83.0 i386 1.83.0-4 [287 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libboost-system1.83.0 i386 1.83.0-4 [230 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libboost-system1.83-dev i386 1.83.0-4 [231 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83-dev i386 1.83.0-4 [305 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libboost-filesystem-dev i386 1.83.0.2+b2 [3640 B] Get: 120 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-4 [329 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-5+b1 [10.6 MB] Get: 122 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-4 [347 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-4 [264 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 125 http://deb.debian.org/debian trixie/main i386 libboost-math1.83.0 i386 1.83.0-4 [433 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libboost-math1.83-dev i386 1.83.0-4 [512 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 128 http://deb.debian.org/debian trixie/main i386 libmpich12 i386 4.2.1-4 [1519 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libboost-mpi1.83.0 i386 1.83.0-4 [274 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 libnuma1 i386 2.0.18-1+b1 [23.9 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libnuma-dev i386 2.0.18-1+b1 [38.8 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libltdl7 i386 2.4.7-8 [395 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 libltdl-dev i386 2.4.7-8 [167 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libhwloc-dev i386 2.11.2-1 [271 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libslurm42t64 i386 24.11.0-1.1 [753 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 mpich i386 4.2.1-4 [236 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libmpich-dev i386 4.2.1-4 [2499 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 mpi-default-dev i386 1.17 [3144 B] Get: 139 http://deb.debian.org/debian trixie/main i386 libboost-mpi1.83-dev i386 1.83.0-4 [293 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libboost-mpi-dev i386 1.83.0.2+b2 [3684 B] Get: 141 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83.0 i386 1.83.0-4 [360 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83-dev i386 1.83.0-4 [390 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libboost-program-options-dev i386 1.83.0.2+b2 [3616 B] Get: 144 http://deb.debian.org/debian trixie/main i386 libboost-serialization-dev i386 1.83.0.2+b2 [3832 B] Get: 145 http://deb.debian.org/debian trixie/main i386 libboost-thread1.83.0 i386 1.83.0-4 [271 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libboost-thread1.83-dev i386 1.83.0-4 [279 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libboost-thread-dev i386 1.83.0.2+b2 [3632 B] Get: 148 http://deb.debian.org/debian trixie/main i386 libboost-timer1.83.0 i386 1.83.0-4 [235 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libboost-timer1.83-dev i386 1.83.0-4 [237 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libboost-timer-dev i386 1.83.0.2+b2 [3724 B] Get: 151 http://deb.debian.org/debian trixie/main i386 libbrotli-dev i386 1.1.0-2+b6 [313 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libbtf2 i386 1:7.8.3+dfsg-2 [25.8 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libc6-dbg i386 2.40-4 [6819 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libcamd3 i386 1:7.8.3+dfsg-2 [41.1 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libccolamd3 i386 1:7.8.3+dfsg-2 [43.2 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libcolamd3 i386 1:7.8.3+dfsg-2 [35.6 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libcholmod5 i386 1:7.8.3+dfsg-2 [733 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libcombblas2.0.0t64 i386 2.0.0-6+b1 [262 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libidn2-dev i386 2.3.7-2+b1 [126 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libkrb5-dev i386 1.21.3-3 [15.7 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libldap-dev i386 2.5.19+dfsg-1 [324 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libnghttp2-dev i386 1.64.0-1 [123 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libpsl-dev i386 0.21.2-1.1+b1 [78.4 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-3 [329 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libgmp-dev i386 2:6.3.0+dfsg-3 [661 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libevent-2.1-7t64 i386 2.1.12-stable-10+b1 [195 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libunbound8 i386 1.22.0-1 [632 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libgnutls-dane0t64 i386 3.8.8-2 [447 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libgnutls-openssl27t64 i386 3.8.8-2 [447 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libp11-kit-dev i386 0.25.5-3 [208 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libtasn1-6-dev i386 4.19.0-3+b3 [102 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 nettle-dev i386 3.10-1+b1 [1334 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libgnutls28-dev i386 3.8.8-2 [1453 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 librtmp-dev i386 2.4+20151223.gitfa8646d.1-2+b5 [72.3 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.3.2-2 [2790 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libssh2-1-dev i386 1.11.1-1 [407 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libzstd-dev i386 1.5.6+dfsg-1+b1 [355 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libcurl4-openssl-dev i386 8.11.1-1 [522 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libcxsparse4 i386 1:7.8.3+dfsg-2 [102 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libfmt10 i386 10.1.1+ds1-4 [134 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-310 i386 1.14.5+repack-1 [1386 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libfftw3-double3 i386 3.3.10-2+b1 [629 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libfftw3-long3 i386 3.3.10-2+b1 [349 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libfftw3-single3 i386 3.3.10-2+b1 [646 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libfftw3-mpi3 i386 3.3.10-2+b1 [66.1 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libmetis5 i386 5.1.0.dfsg-7+b2 [177 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libptscotch-7.0 i386 7.0.6-1 [818 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libsuperlu-dist8 i386 8.2.1+dfsg1-5+b1 [567 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libhypre-2.32.0 i386 2.32.0-4 [1544 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libklu2 i386 1:7.8.3+dfsg-2 [95.5 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 mpi-default-bin i386 1.17 [2372 B] Get: 193 http://deb.debian.org/debian trixie/main i386 libscalapack-mpich2.2 i386 2.2.1-7+b1 [1454 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 libmumps-5.7 i386 5.7.3-3+b1 [2033 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 libspqr4 i386 1:7.8.3+dfsg-2 [167 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 libsuperlu7 i386 7.0.0+dfsg1-2 [175 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 libumfpack6 i386 1:7.8.3+dfsg-2 [323 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 libyaml-0-2 i386 0.2.5-2 [55.8 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 ocl-icd-libopencl1 i386 2.3.2-1+b2 [43.6 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 libpetsc-real3.22 i386 3.22.2+dfsg1-1+b1 [6343 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 libpugixml1v5 i386 1.14-2 [94.2 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libparpack2t64 i386 3.9.1-4 [96.6 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libslepc-real3.22 i386 3.22.2+dfsg1-1 [1112 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 libspdlog1.12 i386 1:1.12.0+ds-2+b3 [114 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 libdolfinx-real0.9 i386 1:0.9.0-5+b1 [596 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libldl3 i386 1:7.8.3+dfsg-2 [25.1 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libsuitesparse-mongoose3 i386 1:7.8.3+dfsg-2 [55.0 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 librbio4 i386 1:7.8.3+dfsg-2 [45.4 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 libspex3 i386 1:7.8.3+dfsg-2 [70.1 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 libparu1 i386 1:7.8.3+dfsg-2 [82.2 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libsuitesparse-dev i386 1:7.8.3+dfsg-2 [1719 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 libscotch-7.0 i386 7.0.6-1 [534 kB] Get: 221 http://deb.debian.org/debian trixie/main i386 libscotch-dev i386 7.0.6-1 [1706 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 libptscotch-dev i386 7.0.6-1 [1551 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 libscalapack-mpich-dev i386 2.2.1-7+b1 [11.3 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 libscalapack-mpi-dev i386 2.2.1-7+b1 [6428 B] Get: 225 http://deb.debian.org/debian trixie/main i386 libfftw3-quad3 i386 3.3.10-2+b1 [1860 kB] Get: 226 http://deb.debian.org/debian trixie/main i386 libfftw3-bin i386 3.3.10-2+b1 [50.0 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libfftw3-dev i386 3.3.10-2+b1 [3254 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 libfftw3-mpi-dev i386 3.3.10-2+b1 [70.5 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 opencl-c-headers all 3.0~2024.10.24-2 [46.8 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 opencl-clhpp-headers all 3.0~2024.10.24-2 [50.7 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 ocl-icd-opencl-dev i386 2.3.2-1+b2 [8660 B] Get: 232 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-fortran-310 i386 1.14.5+repack-1 [120 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-310 i386 1.14.5+repack-1 [81.3 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-fortran-310 i386 1.14.5+repack-1 [45.4 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-cpp-310 i386 1.14.5+repack-1 [140 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-cpp-310 i386 1.14.5+repack-1 [24.6 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3+b1 [171 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3+b1 [305 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 libjpeg-dev i386 1:2.1.5-3+b1 [72.2 kB] Get: 240 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-dev i386 1.14.5+repack-1 [3442 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 libhdf5-mpi-dev i386 1.14.5+repack-1 [18.5 kB] Get: 242 http://deb.debian.org/debian trixie/main i386 libsuperlu-dev i386 7.0.0+dfsg1-2 [21.9 kB] Get: 243 http://deb.debian.org/debian trixie/main i386 libsuperlu-dist-dev i386 8.2.1+dfsg1-5+b1 [875 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 libxau-dev i386 1:1.0.11-1 [24.0 kB] Get: 247 http://deb.debian.org/debian trixie/main i386 libxdmcp-dev i386 1:1.1.5-1 [45.0 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 libxcb1-dev i386 1.17.0-2+b1 [186 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 libx11-dev i386 2:1.8.10-2 [917 kB] Get: 251 http://deb.debian.org/debian trixie/main i386 libyaml-dev i386 0.2.5-2 [67.7 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 libpetsc3.22-dev-common all 3.22.2+dfsg1-1 [311 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 libhypre-dev i386 2.32.0-4 [1842 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 libmumps-dev i386 5.7.3-3+b1 [1946 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 valgrind i386 1:3.20.0-2.1 [8861 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 valgrind-mpi i386 1:3.20.0-2.1 [118 kB] Get: 258 http://deb.debian.org/debian trixie/main i386 libpetsc-real3.22-dev i386 3.22.2+dfsg1-1+b1 [7566 kB] Get: 259 http://deb.debian.org/debian trixie/main i386 libparpack2-dev i386 3.9.1-4 [113 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 libslepc-real3.22-dev i386 3.22.2+dfsg1-1 [6103 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 libdolfinx-real-dev i386 1:0.9.0-5+b1 [48.8 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 libpugixml-dev i386 1.14-2 [115 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 libfmt-dev i386 10.1.1+ds1-4 [177 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 libspdlog-dev i386 1:1.12.0+ds-2+b3 [85.5 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 libxml2-dev i386 2.12.7+dfsg+really2.9.14-0.2+b1 [857 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 python3-cffi-backend i386 1.17.1-2+b1 [95.5 kB] Get: 267 http://deb.debian.org/debian trixie/main i386 python3-ply all 3.11-7 [62.6 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 python3-pycparser all 2.22-2 [78.0 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 python3-cffi all 1.17.1-2 [89.4 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.8-3 [2171 kB] Get: 271 http://deb.debian.org/debian trixie/main i386 libexpat1-dev i386 2.6.4-1 [165 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 libpython3.12-dev i386 3.12.8-3 [5296 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 libpython3-dev i386 3.12.8-1 [10.1 kB] Get: 274 http://deb.debian.org/debian trixie/main i386 python3.12-dev i386 3.12.8-3 [505 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 libjs-sphinxdoc all 8.1.3-3 [30.4 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 python3-dev i386 3.12.8-1 [26.1 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 279 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 283 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 284 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 285 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 75.6.0-1 [222 kB] Get: 286 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-12 [4752 kB] Get: 287 http://deb.debian.org/debian trixie/main i386 python3-ufl all 2024.2.0-2 [150 kB] Get: 288 http://deb.debian.org/debian trixie/main i386 python3-basix i386 0.9.0-2+b1 [137 kB] Get: 289 http://deb.debian.org/debian trixie/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 290 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 291 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 75.6.0-1 [720 kB] Get: 292 http://deb.debian.org/debian trixie/main i386 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 293 http://deb.debian.org/debian trixie/main i386 libdolfinx-dev i386 1:0.9.0-5+b1 [202 kB] Fetched 215 MB in 5s (43.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.8-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-3_i386.deb ... Unpacking python3.12-minimal (3.12.8-3) ... Setting up libpython3.12-minimal:i386 (3.12.8-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20272 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.8-1_i386.deb ... Unpacking python3-minimal (3.12.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_i386.deb ... Unpacking libcom-err2:i386 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.8-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-3_i386.deb ... Unpacking python3.12 (3.12.8-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.8-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.8-1) ... Setting up python3-minimal (3.12.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21335 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.8-1_i386.deb ... Unpacking python3 (3.12.8-1) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-6_i386.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-3_i386.deb ... Unpacking gettext-base (0.22.5-3) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../008-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-6_i386.deb ... Unpacking groff-base (1.23.0-6) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-12_i386.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../011-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. 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Setting up liblapack3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-3) ... Setting up libarpack2t64:i386 (3.9.1-4) ... Setting up libgmp-dev:i386 (2:6.3.0+dfsg-3) ... Setting up libamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libxau-dev:i386 (1:1.0.11-1) ... Setting up libboost-chrono1.83-dev:i386 (1.83.0-4) ... Setting up libspdlog1.12:i386 (1:1.12.0+ds-2+b3) ... Setting up nettle-dev:i386 (3.10-1+b1) ... Setting up libyaml-dev:i386 (0.2.5-2) ... Setting up libboost-math1.83-dev:i386 (1.83.0-4) ... Setting up libtool (2.4.7-8) ... Setting up libcolamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libspex3:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-chrono-dev:i386 (1.83.0.2+b2) ... Setting up libfftw3-bin (3.3.10-2+b1) ... Setting up libsuitesparse-mongoose3:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-math-dev:i386 (1.83.0.2+b2) ... Setting up libpugixml-dev:i386 (1.14-2) ... Setting up hwloc-nox (2.11.2-1) ... Setting up libaec-dev:i386 (1.1.3-1+b1) ... Setting up libcxsparse4:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:i386 (1.83.0-4) ... Setting up libjpeg-dev:i386 (1:2.1.5-3+b1) ... Setting up libcombblas2.0.0t64:i386 (2.0.0-6+b1) ... Setting up libfftw3-mpi3:i386 (3.3.10-2+b1) ... Setting up libboost-filesystem1.83-dev:i386 (1.83.0-4) ... Setting up libldap-2.5-0:i386 (2.5.19+dfsg-1) ... Setting up libcamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libsuperlu7:i386 (7.0.0+dfsg1-2) ... Setting up pkgconf:i386 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:i386 (2.0.18-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:i386 (2.4.7-8) ... Setting up libxdmcp-dev:i386 (1:1.1.5-1) ... Setting up libxml2-dev:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:i386 (1.83.0-4) ... Setting up librbio4:i386 (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:i386 (1.83.0-4) ... Setting up libldap-dev:i386 (2.5.19+dfsg-1) ... Setting up opencl-clhpp-headers (3.0~2024.10.24-2) ... Setting up liblapack-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up gfortran-14-i686-linux-gnu (14.2.0-8) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libfmt-dev:i386 (10.1.1+ds1-4) ... Setting up libboost-regex1.83-dev:i386 (1.83.0-4) ... Setting up libboost-serialization-dev:i386 (1.83.0.2+b2) ... Setting up libssh2-1-dev:i386 (1.11.1-1) ... Setting up libjs-sphinxdoc (8.1.3-3) ... Setting up ocl-icd-opencl-dev:i386 (2.3.2-1+b2) ... Setting up libccolamd3:i386 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libbasix0.9:i386 (0.9.0-2+b1) ... Setting up groff-base (1.23.0-6) ... Setting up libparpack2t64:i386 (3.9.1-4) ... Setting up libhwloc-dev:i386 (2.11.2-1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libsuperlu-dev:i386 (7.0.0+dfsg1-2) ... Setting up libbasix-dev:i386 (0.9.0-2+b1) ... Setting up libarchive13t64:i386 (3.7.4-1.1) ... Setting up libfftw3-dev:i386 (3.3.10-2+b1) ... Setting up libboost-timer-dev:i386 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:i386 (1.83.0.2+b2) ... Setting up libboost-thread1.83-dev:i386 (1.83.0-4) ... Setting up libgnutls28-dev:i386 (3.8.8-2) ... Setting up libnghttp2-dev:i386 (1.64.0-1) ... Setting up libcholmod5:i386 (1:7.8.3+dfsg-2) ... Setting up libarpack2-dev:i386 (3.9.1-4) ... Setting up libxcb1-dev:i386 (1.17.0-2+b1) ... Setting up libcurl4t64:i386 (8.11.1-1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up libspqr4:i386 (1:7.8.3+dfsg-2) ... Setting up libsuperlu-dist8:i386 (8.2.1+dfsg1-5+b1) ... Setting up mpich (4.2.1-4) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libboost-iostreams1.83-dev:i386 (1.83.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libfftw3-mpi-dev:i386 (3.3.10-2+b1) ... Setting up mpi-default-bin (1.17) ... Setting up libx11-dev:i386 (2:1.8.10-2) ... Setting up libscalapack-mpich2.2:i386 (2.2.1-7+b1) ... Setting up libhypre-2.32.0:i386 (2.32.0-4) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up libspdlog-dev:i386 (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libsuperlu-dist-dev:i386 (8.2.1+dfsg1-5+b1) ... Setting up libmumps-5.7:i386 (5.7.3-3+b1) ... Setting up gfortran-i686-linux-gnu (4:14.2.0-1) ... Setting up libklu2:i386 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:i386 (1.21.3-3) ... Setting up librtmp-dev:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libmpich-dev:i386 (4.2.1-4) ... update-alternatives: using /usr/include/i386-linux-gnu/mpich to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up libscalapack-mpich-dev:i386 (2.2.1-7+b1) ... Setting up libumfpack6:i386 (1:7.8.3+dfsg-2) ... Setting up mpi-default-dev (1.17) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up cmake (3.30.5-1) ... Setting up libscalapack-mpi-dev:i386 (2.2.1-7+b1) ... Setting up libhdf5-mpich-310:i386 (1.14.5+repack-1) ... Setting up libboost-thread-dev:i386 (1.83.0.2+b2) ... Setting up libkadm5clnt-mit12:i386 (1.21.3-3) ... Setting up libhdf5-mpich-hl-310:i386 (1.14.5+repack-1) ... Setting up libhdf5-mpich-cpp-310:i386 (1.14.5+repack-1) ... Setting up libpython3.12-stdlib:i386 (3.12.8-3) ... Setting up libmumps-dev:i386 (5.7.3-3+b1) ... Setting up libscotch-dev (7.0.6-1) ... Setting up libkdb5-10t64:i386 (1.21.3-3) ... Setting up libparpack2-dev:i386 (3.9.1-4) ... Setting up python3.12 (3.12.8-3) ... Setting up libpetsc-real3.22:i386 (3.22.2+dfsg1-1+b1) ... update-alternatives: using /usr/lib/i386-linux-gnu/libpetsc_real.so.3.22.2 to provide /usr/lib/i386-linux-gnu/libpetsc.so.3.22 (libpetsc.so.3.22) in auto mode Setting up debhelper (13.20) ... Setting up libhypre-dev:i386 (2.32.0-4) ... Setting up libptscotch-dev (7.0.6-1) ... Setting up libparu1:i386 (1:7.8.3+dfsg-2) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libpython3.12t64:i386 (3.12.8-3) ... Setting up libboost-mpi1.83-dev (1.83.0-4) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpich-hl-cpp-310:i386 (1.14.5+repack-1) ... Setting up libhdf5-mpich-fortran-310:i386 (1.14.5+repack-1) ... Setting up libkadm5srv-mit12:i386 (1.21.3-3) ... Setting up libpython3-stdlib:i386 (3.12.8-1) ... Setting up krb5-multidev:i386 (1.21.3-3) ... Setting up libslepc-real3.22 (3.22.2+dfsg1-1) ... update-alternatives: using /usr/lib/i386-linux-gnu/libslepc_real.so.3.22.2 to provide /usr/lib/i386-linux-gnu/libslepc.so.3.22 (libslepc.so.3.22) in auto mode Setting up libdolfinx-real0.9:i386 (1:0.9.0-5+b1) ... Setting up libsuitesparse-dev:i386 (1:7.8.3+dfsg-2) ... Setting up libhdf5-mpich-hl-fortran-310:i386 (1.14.5+repack-1) ... Setting up python3 (3.12.8-1) ... /usr/share/petsc/3.22/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.22/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.22/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:i386 (3.12.8-3) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up libkrb5-dev:i386 (1.21.3-3) ... Setting up libcurl4-openssl-dev:i386 (8.11.1-1) ... Setting up python3.12-dev (3.12.8-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-cffi-backend:i386 (1.17.1-2+b1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up libpython3-dev:i386 (3.12.8-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up libhdf5-mpich-dev (1.14.5+repack-1) ... update-alternatives: using /usr/bin/h5pcc.mpich to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-mpich.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.mpich because link group mpi has changed slave links update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.8-1) ... Setting up libhdf5-mpi-dev:i386 (1.14.5+repack-1) ... Setting up libpetsc3.22-dev-common (3.22.2+dfsg1-1) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up python3-setuptools (75.6.0-1) ... Setting up python3-cffi (1.17.1-2) ... Setting up libpetsc-real3.22-dev:i386 (3.22.2+dfsg1-1+b1) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/libpetsc_real.so.3.22.2 to provide /usr/lib/i386-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real to provide /usr/lib/petscdir/3.22 (petsc3.22) in auto mode Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up libslepc-real3.22-dev (3.22.2+dfsg1-1) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/libslepc_real.so.3.22.2 to provide /usr/lib/i386-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real to provide /usr/lib/slepcdir/3.22 (slepc3.22) in auto mode Setting up python3-ufl (2024.2.0-2) ... Setting up libdolfinx-real-dev:i386 (1:0.9.0-5+b1) ... Setting up python3-basix (0.9.0-2+b1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libdolfinx-dev:i386 (1:0.9.0-5+b1) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.9.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=cmake --sourcedirectory=src dh_auto_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_clean -O--buildsystem=cmake -O--sourcedirectory=src debian/rules binary dh binary --buildsystem=cmake --sourcedirectory=src dh_update_autotools_config -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf -O--buildsystem=cmake -O--sourcedirectory=src debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' dh_auto_configure -- -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF ../src -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/i386-linux-gnu/mpich/lib/libmpich.so (found version "4.1") -- Found MPI_CXX: /usr/lib/i386-linux-gnu/mpich/lib/libmpichcxx.so (found version "4.1") -- Found MPI: TRUE (found version "4.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.14.5") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -D_FILE_OFFSET_BITS=64 -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_LIBRARIES: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -D_FILE_OFFSET_BITS=64 -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' CMake Warning (dev) at CMakeLists.txt:52 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost 1.83.0 at /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS program_options -- Found boost_program_options 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_program_options-1.83.0 -- [x] libboost_program_options.so.1.83.0 -- [ ] libboost_program_options.a -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -- Configuring done (4.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src cd obj-i686-linux-gnu && make -j11 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' [ 9%] Generating Poisson.c [ 18%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Poisson.py ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Elasticity.py cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.9.0/src /build/reproducible-path/fenicsx-performance-tests-0.9.0/src /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu 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-I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/main.cpp [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration 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/usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/Elasticity.c /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/Poisson.c [100%] Linking CXX executable dolfinx-scaling-test /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 /usr/bin/c++ -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wl,-z,relro "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test /usr/lib/i386-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/i386-linux-gnu/libboost_program_options.so.1.83.0 -lpthread /usr/lib/i386-linux-gnu/libpugixml.so.1.14 /usr/lib/i386-linux-gnu/libbasix.so.0.9.0 /usr/lib/i386-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/i386-linux-gnu/mpich/lib/libmpichcxx.so /usr/lib/i386-linux-gnu/mpich/lib/libmpich.so /usr/lib/i386-linux-gnu/libspdlog.so.1.12.0 /usr/lib/i386-linux-gnu/libfmt.so.10.1.0 /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so /usr/lib/slepcdir/slepc3.22/i386-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib/libpetsc_real.so make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' [100%] Built target dolfinx-scaling-test make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu ==== elasticity weak scaling (3 processes with ndofs=10000) ==== [2024-12-30 02:31:06.224] [RANK: 0] [info] Using partitioner with 69312 cell data [2024-12-30 02:31:06.224] [RANK: 0] [info] Compute partition of cells across ranks [2024-12-30 02:31:06.224] [RANK: 0] [info] Building mesh dual graph [2024-12-30 02:31:06.224] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:06.254] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-12-30 02:31:06.271] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:06.279] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:06.279] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-12-30 02:31:06.289] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) [2024-12-30 02:31:06.289] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-12-30 02:31:11.360] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:11.360] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:11.367] [RANK: 0] [info] Extract basic topology: 69312->69312 [2024-12-30 02:31:11.367] [RANK: 0] [info] Build local dual graph [2024-12-30 02:31:11.367] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:11.401] [RANK: 0] [info] GPS pseudo-diameter:(120) 624-16081 [2024-12-30 02:31:11.406] [RANK: 0] [info] Create topology (single cell type) [2024-12-30 02:31:11.406] [RANK: 0] [info] Create topology (generalised) [2024-12-30 02:31:11.409] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:11.409] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:11.415] [RANK: 0] [info] Compute ghost indices [2024-12-30 02:31:11.415] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-12-30 02:31:11.415] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-12-30 02:31:11.418] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:11.418] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:11.425] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.425] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.426] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.426] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.429] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:11.429] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:11.429] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-12-30 02:31:11.429] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.430] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.430] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-12-30 02:31:11.430] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:11.431] [RANK: 0] [info] Cell type: 0 dofmap: 17328x4 [2024-12-30 02:31:11.435] [RANK: 0] [info] Global index computation [2024-12-30 02:31:11.435] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:11.435] [RANK: 0] [info] Get global indices [2024-12-30 02:31:11.436] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.436] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times [2024-12-30 02:31:11.438] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-12-30 02:31:11.465] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.465] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.501] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.501] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.503] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:11.503] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-12-30 02:31:11.505] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:11.505] [RANK: 0] [info] Cell type: 0 dofmap: 17328x4 [2024-12-30 02:31:11.509] [RANK: 0] [info] Global index computation [2024-12-30 02:31:11.509] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:11.509] [RANK: 0] [info] Get global indices [2024-12-30 02:31:11.510] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:11.510] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:11.511] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:11.511] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:11.511] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-12-30 02:31:11.545] [RANK: 0] [info] Column ghost size increased from 209 to 523 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-5+b1 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.22.2, Nov 28, 2024 Problem type: elasticity Scaling type: weak Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- [2024-12-30 02:31:11.783] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 Square graph aggressive coarsening MatCoarsen Object: 3 MPI processes type: misk Number smoothing steps to construct prolongation 1 Complexity: grid = 1.0932 operator = 1.3816 Per-level complexity: op = operator, int = interpolation #equations | #active PEs | avg nnz/row op | avg nnz/row int 210 1 167 0 2586 3 172 35 30000 3 42 22 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.11558 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=210, cols=210, bs=6 package used to perform factorization: petsc total: nonzeros=38916, allocated nonzeros=38916 using I-node routines: found 54 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=210, cols=210, bs=6 total: nonzeros=34884, allocated nonzeros=34884 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 69 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=210, cols=210, bs=6 total: nonzeros=34884, allocated nonzeros=34884 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 69 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.263642, max 2.90006 eigenvalues provided (min 0.0536717, max 2.63642) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=2586, cols=2586, bs=6 total: nonzeros=442692, allocated nonzeros=442692 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 268 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.258239, max 2.84063 eigenvalues provided (min 0.0724415, max 2.58239) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3408 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3408 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 5.280000 5.280000 Build dofmap data | 2 0.005000 0.010000 Build sparsity | 1 0.000000 0.000000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.070000 0.070000 Compute graph partition (SCOTCH) | 1 5.070000 5.070000 Compute local part of mesh dual graph (mixed) | 2 0.030000 0.060000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.010000 0.010000 Distribute row-wise data (scalable) | 1 0.010000 0.010000 GPS: create_level_structure | 5 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.150000 0.150000 Init PETSc | 1 0.090000 0.090000 Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 1.040000 1.040000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 5.050000 5.050000 SparsityPattern::finalize | 1 0.010000 0.010000 Topology: create | 1 0.030000 0.030000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 ZZZ Assemble matrix | 1 0.180000 0.180000 ZZZ Assemble vector | 1 0.010000 0.010000 ZZZ Create Mesh | 1 5.280000 5.280000 ZZZ Create RHS function | 1 0.020000 0.020000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.070000 0.070000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.020000 0.020000 ZZZ FunctionSpace | 1 0.010000 0.010000 ZZZ Solve | 1 1.050000 1.050000 *** Number of Krylov iterations: 19 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named ionos2-i386 with 3 processes, by pbuilder1 on Mon Dec 30 02:31:12 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total Time (sec): 6.687e+00 1.000 6.687e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.224e+08 1.066 2.134e+08 6.401e+08 Flops/sec: 3.325e+07 1.066 3.191e+07 9.572e+07 MPI Msg Count: 8.050e+02 1.041 7.843e+02 2.353e+03 MPI Msg Len (bytes): 6.920e+06 1.343 7.736e+03 1.820e+07 MPI Reductions: 9.600e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 6.6869e+00 100.0% 6.4010e+08 100.0% 2.353e+03 100.0% 7.736e+03 100.0% 7.900e+01 82.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 109 1.0 6.1409e-02 19.6 0.00e+00 0.0 1.8e+02 4.0e+00 0.0e+00 1 0 8 0 0 1 0 8 0 0 0 BuildTwoSidedF 83 1.0 6.1155e-02 20.2 0.00e+00 0.0 1.0e+02 5.2e+04 0.0e+00 1 0 4 30 0 1 0 4 30 0 0 MatMult 199 1.0 3.0027e-01 1.5 1.22e+08 1.1 1.2e+03 5.6e+03 0.0e+00 4 55 51 37 0 4 55 51 37 0 1162 MatMultAdd 40 1.0 2.5181e-02 2.3 9.90e+06 1.0 1.6e+02 1.5e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1150 MatMultTranspose 40 1.0 7.7731e-02 2.0 9.91e+06 1.0 1.6e+02 1.5e+03 0.0e+00 1 5 7 1 0 1 5 7 1 0 373 MatSolve 20 0.0 3.0765e-03 0.0 1.55e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 505 MatLUFactorSym 1 1.0 1.7591e-03 99.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 3.5241e-03 887.7 4.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1320 MatScale 6 1.0 1.6140e-03 1.3 5.98e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 1085 MatResidual 40 1.0 4.8765e-02 1.1 2.38e+07 1.1 2.4e+02 5.3e+03 0.0e+00 1 11 10 7 0 1 11 10 7 0 1390 MatAssemblyBegin 45 1.0 7.9080e-02 3.2 0.00e+00 0.0 1.0e+02 5.2e+04 0.0e+00 1 0 4 30 0 1 0 4 30 0 0 MatAssemblyEnd 45 1.0 6.0530e-02 1.1 7.29e+04 1.3 1.7e+02 5.0e+02 1.8e+01 1 0 7 0 19 1 0 7 0 23 3 MatGetRowIJ 1 0.0 5.2582e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 1 1.0 4.5770e-03 1.0 0.00e+00 0.0 4.0e+00 3.3e+02 5.0e+00 0 0 0 0 5 0 0 0 0 6 0 MatGetOrdering 1 0.0 1.6610e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 2.1604e-03 1.0 0.00e+00 0.0 1.2e+02 8.3e+02 9.0e+00 0 0 5 1 9 0 0 5 1 11 0 MatZeroEntries 2 1.0 4.9300e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 4.2512e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatAXPY 4 1.0 1.2306e-02 1.0 1.17e+05 1.0 2.4e+01 3.9e+02 2.0e+00 0 0 1 0 2 0 0 1 0 3 28 MatTranspose 9 1.0 1.1144e-02 1.1 0.00e+00 0.0 1.0e+02 1.8e+03 9.0e+00 0 0 4 1 9 0 0 4 1 11 0 MatMatMultSym 6 1.0 6.0225e-02 1.1 0.00e+00 0.0 6.0e+01 1.0e+04 6.0e+00 1 0 3 3 6 1 0 3 3 8 0 MatMatMultNum 2 1.0 1.5486e-02 1.0 7.15e+06 1.1 1.2e+01 3.2e+04 0.0e+00 0 3 1 2 0 0 3 1 2 0 1313 MatPtAPSymbolic 2 1.0 1.9141e-01 1.0 0.00e+00 0.0 6.0e+01 5.7e+04 6.0e+00 3 0 3 19 6 3 0 3 19 8 0 MatPtAPNumeric 2 1.0 2.7803e-01 1.0 6.05e+07 1.2 2.8e+01 1.1e+05 2.0e+00 4 26 1 16 2 4 26 1 16 3 604 MatTrnMatMultSym 1 1.0 3.5579e-02 1.0 0.00e+00 0.0 4.2e+01 2.9e+04 4.0e+00 1 0 2 7 4 1 0 2 7 5 0 MatGetLocalMat 7 1.0 7.4501e-03 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 6.9226e-03 1.3 0.00e+00 0.0 8.4e+01 4.3e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 MatCreateGraph 2 1.0 2.9083e-02 1.0 1.54e+05 1.0 1.4e+02 1.6e+03 1.4e+01 0 0 6 1 15 0 0 6 1 18 16 VecMDot 20 1.0 1.8847e-02 7.6 1.21e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 190 VecTDot 40 1.0 2.5051e-02 19.1 8.18e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 96 VecNorm 42 1.0 3.9954e-02 36.8 6.52e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 48 VecScale 22 1.0 1.1952e-04 1.1 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2999 VecCopy 124 1.0 1.2764e-03 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 141 1.0 6.8912e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 40 1.0 1.8123e-03 2.0 7.99e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1294 VecAYPX 258 1.0 6.1253e-03 1.9 2.13e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1028 VecAXPBYCZ 80 1.0 2.3754e-03 2.2 2.21e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2744 VecMAXPY 22 1.0 5.9766e-04 1.0 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 7088 VecAssemblyBegin 61 1.0 1.7804e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAssemblyEnd 61 1.0 1.2133e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 182 1.0 7.7487e-03 2.3 1.00e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 383 VecScatterBegin 343 1.0 7.0421e-03 1.2 0.00e+00 0.0 1.8e+03 4.4e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 VecScatterEnd 343 1.0 1.3191e-01 18.7 1.15e+04 1.5 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 VecNormalize 22 1.0 2.1458e-03 3.2 3.64e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 501 SFSetGraph 26 1.0 2.4485e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 26 1.0 2.7370e-03 1.0 0.00e+00 0.0 2.5e+02 4.8e+02 0.0e+00 0 0 11 1 0 0 0 11 1 0 0 SFBcastBegin 9 1.0 6.2475e-04 2.1 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 SFBcastEnd 9 1.0 4.0364e-04 7.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 3 1.0 1.4104e-04 1.2 0.00e+00 0.0 1.5e+01 6.3e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 3 1.0 4.2208e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 355 1.0 1.9252e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 355 1.0 1.5432e-03 1.1 1.15e+04 1.5 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 19 KSPSetUp 1 1.0 2.0764e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 3.6950e-01 1.0 1.37e+08 1.1 1.4e+03 4.7e+03 0.0e+00 6 63 59 36 0 6 63 59 36 0 1085 KSPGMRESOrthog 20 1.0 1.9458e-02 6.3 2.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 368 PCSetUp_GAMG+ 1 1.0 6.6975e-01 1.0 8.33e+07 1.2 8.9e+02 1.2e+04 5.8e+01 10 36 38 58 60 10 36 38 58 73 348 PCGAMGCreateG 2 1.0 2.9093e-02 1.0 1.54e+05 1.0 1.4e+02 1.6e+03 1.4e+01 0 0 6 1 15 0 0 6 1 18 16 GAMG Coarsen 4 1.0 4.2845e-02 1.0 0.00e+00 0.0 1.9e+02 7.7e+03 1.3e+01 1 0 8 8 14 1 0 8 8 16 0 GAMG MIS/Agg 2 1.0 4.0275e-02 1.0 0.00e+00 0.0 1.6e+02 8.4e+03 1.3e+01 1 0 7 7 14 1 0 7 7 16 0 PCGAMGProl 2 1.0 1.6753e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 6.0e+00 0 0 11 4 6 0 0 11 4 8 0 GAMG Prol-col 2 1.0 7.8217e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 0.0e+00 0 0 10 3 0 0 0 10 3 0 0 GAMG Prol-lift 2 1.0 8.4833e-03 1.0 0.00e+00 0.0 3.6e+01 6.5e+03 2.0e+00 0 0 2 1 2 0 0 2 1 3 0 PCGAMGOptProl 2 1.0 1.0316e-01 1.0 2.27e+07 1.1 1.9e+02 8.5e+03 6.0e+00 2 10 8 9 6 2 10 8 9 8 629 GAMG smooth 2 1.0 5.0802e-02 1.0 7.71e+06 1.1 7.2e+01 1.4e+04 6.0e+00 1 3 3 5 6 1 3 3 5 8 433 PCGAMGCreateL 2 1.0 4.7404e-01 1.0 6.05e+07 1.2 1.1e+02 6.0e+04 1.9e+01 7 26 5 35 20 7 26 5 35 24 354 GAMG PtAP 2 1.0 4.6888e-01 1.0 6.05e+07 1.2 8.8e+01 7.3e+04 8.0e+00 7 26 4 35 8 7 26 4 35 10 358 GAMG Reduce 1 1.0 1.4331e-01 1.0 2.10e+07 1.7 4.7e+01 4.3e+04 1.5e+01 2 8 2 11 16 2 8 2 11 19 351 PCGAMG Squ l00 1 1.0 3.5586e-02 1.0 0.00e+00 0.0 4.2e+01 2.9e+04 4.0e+00 1 0 2 7 4 1 0 2 7 5 0 PCGAMG Gal l00 1 1.0 3.3071e-01 1.0 3.95e+07 1.0 6.0e+01 7.3e+04 4.0e+00 5 18 3 24 4 5 18 3 24 5 355 PCGAMG Opt l00 1 1.0 3.4466e-02 1.0 5.06e+06 1.0 3.6e+01 2.1e+04 3.0e+00 1 2 2 4 3 1 2 2 4 4 436 PCGAMG Gal l01 1 1.0 1.3817e-01 1.0 2.10e+07 1.7 2.8e+01 7.2e+04 4.0e+00 2 8 1 11 4 2 8 1 11 5 364 PCGAMG Opt l01 1 1.0 9.8371e-03 1.0 2.13e+06 1.4 3.6e+01 6.6e+03 3.0e+00 0 1 2 1 3 0 1 2 1 4 540 PCSetUp 1 1.0 6.6976e-01 1.0 8.33e+07 1.2 8.9e+02 1.2e+04 5.8e+01 10 36 38 58 60 10 36 38 58 73 348 PCSetUpOnBlocks 20 1.0 5.7672e-03 18.5 4.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 807 PCApply 20 1.0 3.2530e-01 1.1 1.19e+08 1.1 1.3e+03 4.3e+03 0.0e+00 5 54 54 31 0 5 54 54 31 0 1067 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 11 11 Matrix 82 82 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 60 60 IS L to G Mapping 5 5 Vector 181 181 Star Forest Graph 34 34 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 5.329e-07 Average time for MPI_Barrier(): 4.0724e-06 Average time for zero size MPI_Send(): 2.34367e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-12-12 12:14:26 on reproducible Machine characteristics: Linux-6.1.0-28-amd64-i686-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lsuperlu_dist -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpichfort -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== elasticity strong scaling (3 processes with ndofs=30000) ==== [2024-12-30 02:31:12.973] [RANK: 0] [info] Using partitioner with 69312 cell data [2024-12-30 02:31:12.973] [RANK: 0] [info] Compute partition of cells across ranks [2024-12-30 02:31:12.973] [RANK: 0] [info] Building mesh dual graph [2024-12-30 02:31:12.973] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:13.002] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-12-30 02:31:13.008] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:13.008] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:13.008] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-12-30 02:31:13.010] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) [2024-12-30 02:31:13.010] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-12-30 02:31:17.947] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:17.947] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:17.952] [RANK: 0] [info] Extract basic topology: 68332->68332 [2024-12-30 02:31:17.952] [RANK: 0] [info] Build local dual graph [2024-12-30 02:31:17.952] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:17.978] [RANK: 0] [info] GPS pseudo-diameter:(119) 16599-1208 [2024-12-30 02:31:17.982] [RANK: 0] [info] Create topology (single cell type) [2024-12-30 02:31:17.982] [RANK: 0] [info] Create topology (generalised) [2024-12-30 02:31:17.986] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:17.986] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:17.991] [RANK: 0] [info] Compute ghost indices [2024-12-30 02:31:17.991] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-12-30 02:31:17.991] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-12-30 02:31:17.993] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:17.993] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:17.999] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.000] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.000] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.000] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.003] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:18.003] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:18.003] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-12-30 02:31:18.003] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.003] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.003] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-12-30 02:31:18.003] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:18.003] [RANK: 0] [info] Cell type: 0 dofmap: 17083x4 [2024-12-30 02:31:18.007] [RANK: 0] [info] Global index computation [2024-12-30 02:31:18.007] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:18.008] [RANK: 0] [info] Get global indices [2024-12-30 02:31:18.008] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.008] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times [2024-12-30 02:31:18.009] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-12-30 02:31:18.032] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.033] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.069] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.069] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.070] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:18.070] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-12-30 02:31:18.071] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:18.071] [RANK: 0] [info] Cell type: 0 dofmap: 17083x4 [2024-12-30 02:31:18.075] [RANK: 0] [info] Global index computation [2024-12-30 02:31:18.075] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:18.076] [RANK: 0] [info] Get global indices [2024-12-30 02:31:18.076] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:18.076] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:18.076] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:18.077] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:18.077] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-12-30 02:31:18.109] [RANK: 0] [info] Column ghost size increased from 214 to 540 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-5+b1 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.22.2, Nov 28, 2024 Problem type: elasticity Scaling type: strong Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- [2024-12-30 02:31:18.306] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 Square graph aggressive coarsening MatCoarsen Object: 3 MPI processes type: misk Number smoothing steps to construct prolongation 1 Complexity: grid = 1.0932 operator = 1.38102 Per-level complexity: op = operator, int = interpolation #equations | #active PEs | avg nnz/row op | avg nnz/row int 228 1 190 0 2568 3 169 38 30000 3 42 22 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.13689 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 package used to perform factorization: petsc total: nonzeros=49032, allocated nonzeros=49032 using I-node routines: found 56 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 total: nonzeros=43128, allocated nonzeros=43128 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 74 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=228, cols=228, bs=6 total: nonzeros=43128, allocated nonzeros=43128 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 74 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.28174, max 3.09914 eigenvalues provided (min 0.0468544, max 2.8174) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=2568, cols=2568, bs=6 total: nonzeros=433728, allocated nonzeros=433728 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 266 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.258343, max 2.84178 eigenvalues provided (min 0.0713745, max 2.58343) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3349 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3349 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 5.030000 5.030000 Build dofmap data | 2 0.000000 0.000000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.070000 0.070000 Compute graph partition (SCOTCH) | 1 4.930000 4.930000 Compute local part of mesh dual graph (mixed) | 2 0.025000 0.050000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.010000 0.010000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.020000 0.020000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.000000 0.000000 Init MPI | 1 0.020000 0.020000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.870000 0.870000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 4.930000 4.930000 SparsityPattern::finalize | 1 0.010000 0.010000 Topology: create | 1 0.020000 0.020000 Topology: determine shared index ownership | 1 0.000000 0.000000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble matrix | 1 0.160000 0.160000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 5.030000 5.030000 ZZZ Create RHS function | 1 0.020000 0.020000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.070000 0.070000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.010000 0.010000 ZZZ FunctionSpace | 1 0.000000 0.000000 ZZZ Solve | 1 0.870000 0.870000 *** Number of Krylov iterations: 19 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named ionos2-i386 with 3 processes, by pbuilder1 on Mon Dec 30 02:31:19 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total Time (sec): 6.203e+00 1.000 6.203e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.299e+08 1.123 2.159e+08 6.478e+08 Flops/sec: 3.706e+07 1.123 3.482e+07 1.044e+08 MPI Msg Count: 8.080e+02 1.041 7.870e+02 2.361e+03 MPI Msg Len (bytes): 7.741e+06 1.445 7.950e+03 1.877e+07 MPI Reductions: 9.600e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 6.2025e+00 100.0% 6.4783e+08 100.0% 2.361e+03 100.0% 7.950e+03 100.0% 7.900e+01 82.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 109 1.0 7.9007e-02 41.8 0.00e+00 0.0 1.8e+02 4.0e+00 0.0e+00 1 0 8 0 0 1 0 8 0 0 0 BuildTwoSidedF 83 1.0 7.8655e-02 43.2 0.00e+00 0.0 1.1e+02 5.4e+04 0.0e+00 1 0 4 30 0 1 0 4 30 0 0 MatMult 199 1.0 1.5258e-01 1.0 1.24e+08 1.1 1.2e+03 5.7e+03 0.0e+00 2 54 51 36 0 2 54 51 36 0 2277 MatMultAdd 40 1.0 1.3549e-02 1.0 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 2155 MatMultTranspose 40 1.0 2.8787e-02 1.4 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1016 MatSolve 20 0.0 2.0811e-03 0.0 1.96e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 940 MatLUFactorSym 1 1.0 2.0696e-03 108.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 4.9334e-03 1356.1 6.82e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1382 MatScale 6 1.0 1.1723e-03 1.1 6.06e+05 1.1 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 1503 MatResidual 40 1.0 2.9852e-02 1.3 2.42e+07 1.1 2.4e+02 5.4e+03 0.0e+00 0 10 10 7 0 0 10 10 7 0 2258 MatAssemblyBegin 45 1.0 9.5872e-02 3.4 0.00e+00 0.0 1.1e+02 5.4e+04 0.0e+00 1 0 4 30 0 1 0 4 30 0 0 MatAssemblyEnd 45 1.0 5.9471e-02 1.1 9.32e+04 2.3 1.7e+02 5.0e+02 1.8e+01 1 0 7 0 19 1 0 7 0 23 4 MatGetRowIJ 1 0.0 4.9779e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 1 1.0 4.4739e-03 1.0 0.00e+00 0.0 4.0e+00 3.7e+02 5.0e+00 0 0 0 0 5 0 0 0 0 6 0 MatGetOrdering 1 0.0 1.4052e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 1.8054e-03 1.0 0.00e+00 0.0 1.2e+02 8.0e+02 9.0e+00 0 0 5 1 9 0 0 5 1 11 0 MatZeroEntries 2 1.0 1.1026e-03 4.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 4.9391e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatAXPY 4 1.0 1.1018e-02 1.0 1.18e+05 1.0 2.4e+01 4.0e+02 2.0e+00 0 0 1 0 2 0 0 1 0 3 31 MatTranspose 9 1.0 9.4017e-03 1.1 0.00e+00 0.0 1.0e+02 1.8e+03 9.0e+00 0 0 4 1 9 0 0 4 1 11 0 MatMatMultSym 6 1.0 6.0283e-02 1.1 0.00e+00 0.0 6.0e+01 1.0e+04 6.0e+00 1 0 3 3 6 1 0 3 3 8 0 MatMatMultNum 2 1.0 1.4539e-02 1.0 7.27e+06 1.1 1.2e+01 3.2e+04 0.0e+00 0 3 1 2 0 0 3 1 2 0 1391 MatPtAPSymbolic 2 1.0 1.9721e-01 1.0 0.00e+00 0.0 6.0e+01 5.9e+04 6.0e+00 3 0 3 19 6 3 0 3 19 8 0 MatPtAPNumeric 2 1.0 2.9442e-01 1.0 6.55e+07 1.2 2.8e+01 1.1e+05 2.0e+00 5 27 1 17 2 5 27 1 17 3 592 MatTrnMatMultSym 1 1.0 3.5453e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 4.0e+00 1 0 2 7 4 1 0 2 7 5 0 MatGetLocalMat 7 1.0 3.9858e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 5.8401e-03 1.3 0.00e+00 0.0 8.4e+01 4.5e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 MatCreateGraph 2 1.0 2.7041e-02 1.0 1.56e+05 1.1 1.4e+02 1.6e+03 1.4e+01 0 0 6 1 15 0 0 6 1 18 17 VecMDot 20 1.0 3.6145e-03 1.2 1.21e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 991 VecTDot 40 1.0 4.4037e-03 4.1 8.04e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 545 VecNorm 42 1.0 1.2707e-02 13.0 6.41e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 151 VecScale 22 1.0 1.1588e-04 1.0 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3091 VecCopy 124 1.0 8.3587e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 141 1.0 5.0008e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 40 1.0 1.2181e-03 1.4 7.85e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1925 VecAYPX 258 1.0 3.8837e-03 1.2 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1620 VecAXPBYCZ 80 1.0 1.4087e-03 1.2 2.19e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4624 VecMAXPY 22 1.0 5.8331e-04 1.1 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 7258 VecAssemblyBegin 61 1.0 1.1994e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAssemblyEnd 61 1.0 1.4745e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 182 1.0 3.8243e-03 1.1 9.98e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 775 VecScatterBegin 343 1.0 7.1525e-03 1.6 0.00e+00 0.0 1.8e+03 4.5e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 VecScatterEnd 343 1.0 1.5830e-02 1.5 1.28e+04 2.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2 VecNormalize 22 1.0 1.1187e-03 2.0 3.62e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 961 SFSetGraph 26 1.0 2.4281e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 26 1.0 1.3470e-03 1.0 0.00e+00 0.0 2.5e+02 4.8e+02 0.0e+00 0 0 11 1 0 0 0 11 1 0 0 SFBcastBegin 10 1.0 3.3761e-04 1.4 0.00e+00 0.0 6.0e+01 1.3e+03 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 SFBcastEnd 10 1.0 1.6272e-04 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 3 1.0 6.6856e-05 1.3 0.00e+00 0.0 1.5e+01 6.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 3 1.0 4.5379e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 356 1.0 1.3831e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 356 1.0 3.8169e-04 1.1 1.28e+04 2.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 82 KSPSetUp 1 1.0 9.9902e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.1338e-01 1.0 1.39e+08 1.1 1.4e+03 4.8e+03 0.0e+00 3 62 59 35 0 3 62 59 35 0 1886 KSPGMRESOrthog 20 1.0 4.2050e-03 1.2 2.41e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1704 PCSetUp_GAMG+ 1 1.0 6.4948e-01 1.0 8.87e+07 1.2 9.0e+02 1.2e+04 5.8e+01 10 37 38 58 60 10 37 38 58 73 368 PCGAMGCreateG 2 1.0 2.7051e-02 1.0 1.56e+05 1.1 1.4e+02 1.6e+03 1.4e+01 0 0 6 1 15 0 0 6 1 18 17 GAMG Coarsen 4 1.0 3.9889e-02 1.0 0.00e+00 0.0 2.0e+02 7.6e+03 1.3e+01 1 0 8 8 14 1 0 8 8 16 0 GAMG MIS/Agg 2 1.0 3.7404e-02 1.0 0.00e+00 0.0 1.6e+02 8.2e+03 1.3e+01 1 0 7 7 14 1 0 7 7 16 0 PCGAMGProl 2 1.0 1.5993e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 6.0e+00 0 0 11 4 6 0 0 11 4 8 0 GAMG Prol-col 2 1.0 7.1977e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 0.0e+00 0 0 10 3 0 0 0 10 3 0 0 GAMG Prol-lift 2 1.0 8.3176e-03 1.0 0.00e+00 0.0 3.6e+01 6.5e+03 2.0e+00 0 0 2 1 2 0 0 2 1 3 0 PCGAMGOptProl 2 1.0 7.0126e-02 1.0 2.30e+07 1.1 1.9e+02 8.6e+03 6.0e+00 1 10 8 9 6 1 10 8 9 8 921 GAMG smooth 2 1.0 4.6867e-02 1.0 7.84e+06 1.1 7.2e+01 1.4e+04 6.0e+00 1 3 3 5 6 1 3 3 5 8 467 PCGAMGCreateL 2 1.0 4.9510e-01 1.0 6.55e+07 1.2 1.1e+02 6.3e+04 1.9e+01 8 27 5 36 20 8 27 5 36 24 352 GAMG PtAP 2 1.0 4.9013e-01 1.0 6.55e+07 1.2 8.8e+01 7.7e+04 8.0e+00 8 27 4 36 8 8 27 4 36 10 356 GAMG Reduce 1 1.0 1.6693e-01 1.0 2.55e+07 1.7 4.7e+01 4.9e+04 1.5e+01 3 9 2 12 16 3 9 2 12 19 345 PCGAMG Squ l00 1 1.0 3.5458e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 4.0e+00 1 0 2 7 4 1 0 2 7 5 0 PCGAMG Gal l00 1 1.0 3.2844e-01 1.0 4.01e+07 1.1 6.0e+01 7.5e+04 4.0e+00 5 18 3 24 4 5 18 3 24 5 355 PCGAMG Opt l00 1 1.0 3.1130e-02 1.0 5.07e+06 1.0 3.6e+01 2.2e+04 3.0e+00 0 2 2 4 3 0 2 2 4 4 482 PCGAMG Gal l01 1 1.0 1.6199e-01 1.0 2.55e+07 1.7 2.8e+01 8.1e+04 4.0e+00 3 9 1 12 4 3 9 1 12 5 355 PCGAMG Opt l01 1 1.0 9.9179e-03 1.0 2.20e+06 1.5 3.6e+01 6.5e+03 3.0e+00 0 1 2 1 3 0 1 2 1 4 525 PCSetUp 1 1.0 6.4949e-01 1.0 8.87e+07 1.2 9.0e+02 1.2e+04 5.8e+01 10 37 38 58 60 10 37 38 58 73 368 PCSetUpOnBlocks 20 1.0 7.4116e-03 23.2 6.82e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 920 PCApply 20 1.0 1.8940e-01 1.1 1.21e+08 1.1 1.3e+03 4.4e+03 0.0e+00 3 54 54 30 0 3 54 54 30 0 1840 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 11 11 Matrix 82 82 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 60 60 IS L to G Mapping 5 5 Vector 181 181 Star Forest Graph 34 34 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 4.674e-07 Average time for MPI_Barrier(): 3.362e-06 Average time for zero size MPI_Send(): 2.24833e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-12-12 12:14:26 on reproducible Machine characteristics: Linux-6.1.0-28-amd64-i686-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lsuperlu_dist -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpichfort -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== poisson weak scaling (3 processes with ndofs=10000) ==== [2024-12-30 02:31:19.279] [RANK: 0] [info] Using partitioner with 216000 cell data [2024-12-30 02:31:19.282] [RANK: 0] [info] Compute partition of cells across ranks [2024-12-30 02:31:19.282] [RANK: 0] [info] Building mesh dual graph [2024-12-30 02:31:19.282] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:19.400] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-12-30 02:31:19.400] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:19.400] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:19.400] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-12-30 02:31:19.406] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) [2024-12-30 02:31:19.406] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-12-30 02:31:27.905] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:27.905] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:27.925] [RANK: 0] [info] Extract basic topology: 212808->212808 [2024-12-30 02:31:27.925] [RANK: 0] [info] Build local dual graph [2024-12-30 02:31:27.925] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:28.050] [RANK: 0] [info] GPS pseudo-diameter:(178) 51375-1626 [2024-12-30 02:31:28.066] [RANK: 0] [info] Create topology (single cell type) [2024-12-30 02:31:28.066] [RANK: 0] [info] Create topology (generalised) [2024-12-30 02:31:28.087] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:28.087] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:28.110] [RANK: 0] [info] Compute ghost indices [2024-12-30 02:31:28.110] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-12-30 02:31:28.110] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-12-30 02:31:28.119] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:28.119] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:28.146] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.148] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.148] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.148] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.164] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:28.164] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:28.164] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-12-30 02:31:28.165] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.165] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.165] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-12-30 02:31:28.167] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:28.168] [RANK: 0] [info] Cell type: 0 dofmap: 53202x4 [2024-12-30 02:31:28.183] [RANK: 0] [info] Global index computation [2024-12-30 02:31:28.183] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:28.184] [RANK: 0] [info] Get global indices [2024-12-30 02:31:28.186] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.186] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times [2024-12-30 02:31:28.193] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-12-30 02:31:28.300] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.304] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.376] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.376] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.383] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:28.383] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-12-30 02:31:28.387] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:28.388] [RANK: 0] [info] Cell type: 0 dofmap: 53202x4 [2024-12-30 02:31:28.404] [RANK: 0] [info] Global index computation [2024-12-30 02:31:28.404] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:28.405] [RANK: 0] [info] Get global indices [2024-12-30 02:31:28.406] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:28.406] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:28.407] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:28.410] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:28.410] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-12-30 02:31:28.524] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:28.524] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) [2024-12-30 02:31:28.576] [RANK: 0] [info] Column ghost size increased from 434 to 1245 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-5+b1 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.22.2, Nov 28, 2024 Problem type: poisson Scaling type: weak Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- [2024-12-30 02:31:28.731] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 8.920000 8.920000 Build dofmap data | 2 0.020000 0.040000 Build sparsity | 1 0.040000 0.040000 Compute connectivity 2-0 | 1 0.010000 0.010000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.190000 0.190000 Compute graph partition (SCOTCH) | 1 8.490000 8.490000 Compute local part of mesh dual graph (mixed) | 2 0.115000 0.230000 Compute local-to-local map | 1 0.010000 0.010000 Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.030000 0.030000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 Init MPI | 1 0.030000 0.030000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.020000 0.040000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.550000 0.550000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 8.490000 8.490000 SparsityPattern::finalize | 1 0.030000 0.030000 Topology: create | 1 0.120000 0.120000 Topology: determine shared index ownership | 1 0.060000 0.060000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble | 1 0.320000 0.320000 ZZZ Assemble matrix | 1 0.120000 0.120000 ZZZ Assemble vector | 1 0.030000 0.030000 ZZZ Create Mesh | 1 8.920000 8.920000 ZZZ Create RHS function | 1 0.110000 0.110000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.190000 0.190000 ZZZ FunctionSpace | 1 0.020000 0.020000 ZZZ Solve | 1 0.560000 0.560000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named ionos2-i386 with 3 processes, by pbuilder1 on Mon Dec 30 02:31:29 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total Time (sec): 1.001e+01 1.000 1.001e+01 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.566e+06 1.036 3.489e+06 1.047e+07 Flops/sec: 3.562e+05 1.036 3.485e+05 1.045e+06 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.879e+05 1.223 5.790e+03 5.211e+05 MPI Reductions: 3.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 1.0012e+01 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.790e+03 100.0% 1.500e+01 46.9% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 3.4969e-02 331.7 0.00e+00 0.0 2.4e+01 4.0e+00 0.0e+00 0 0 27 0 0 0 0 27 0 0 0 BuildTwoSidedF 2 1.0 3.4962e-02 189.4 0.00e+00 0.0 1.2e+01 2.2e+04 0.0e+00 0 0 13 50 0 0 0 13 50 0 0 MatMult 7 1.0 9.0702e-03 2.1 1.95e+06 1.0 4.2e+01 5.5e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 632 MatConvert 1 1.0 1.4763e-02 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 6 0 0 0 0 13 0 MatAssemblyBegin 5 1.0 3.7555e-02 12.3 0.00e+00 0.0 1.2e+01 2.2e+04 0.0e+00 0 0 13 50 0 0 0 13 50 0 0 MatAssemblyEnd 5 1.0 7.9759e-03 1.2 3.60e+03 1.2 1.2e+01 1.4e+03 1.0e+00 0 0 13 3 3 0 0 13 3 7 1 MatGetRowIJ 4 1.0 9.4530e-06 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 3.3991e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetPreallCOO 2 1.0 3.0759e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 3.2042e-03 2.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 5.4965e-03 11.6 3.24e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 9 0 0 0 0 9 0 0 0 173 VecNorm 8 1.0 2.0854e-03 7.3 1.62e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 5 0 0 0 0 5 0 0 0 229 VecCopy 2 1.0 2.0569e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 1.7444e-04 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 5.4542e-04 2.0 2.84e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1529 VecAYPX 6 1.0 3.3129e-04 2.0 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1079 VecScatterBegin 7 1.0 3.8827e-04 1.6 0.00e+00 0.0 4.2e+01 5.5e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 1.8870e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 7.3005e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 2.6756e-04 1.2 0.00e+00 0.0 3.6e+01 8.0e+02 0.0e+00 0 0 40 6 0 0 0 40 6 0 0 SFPack 7 1.0 1.4401e-04 3.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 8.8600e-06 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 1.8003e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.2402e-01 1.0 2.84e+06 1.0 4.2e+01 5.5e+03 0.0e+00 2 80 47 45 0 2 80 47 45 0 37 PCSetUp 1 1.0 3.2649e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 3 0 0 0 6 3 0 0 0 13 0 PCApply 8 1.0 2.1277e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 1 1 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 6.325e-07 Average time for MPI_Barrier(): 5.2474e-06 Average time for zero size MPI_Send(): 4.37067e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-12-12 12:14:26 on reproducible Machine characteristics: Linux-6.1.0-28-amd64-i686-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lsuperlu_dist -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpichfort -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line ==== poisson strong scaling (3 processes with ndofs=30000) ==== [2024-12-30 02:31:29.390] [RANK: 0] [info] Using partitioner with 216000 cell data [2024-12-30 02:31:29.393] [RANK: 0] [info] Compute partition of cells across ranks [2024-12-30 02:31:29.393] [RANK: 0] [info] Building mesh dual graph [2024-12-30 02:31:29.393] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:29.487] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-12-30 02:31:29.511] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:29.512] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:29.512] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-12-30 02:31:29.517] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) [2024-12-30 02:31:29.517] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-12-30 02:31:37.715] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:37.730] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:37.796] [RANK: 0] [info] Extract basic topology: 212860->212860 [2024-12-30 02:31:37.796] [RANK: 0] [info] Build local dual graph [2024-12-30 02:31:37.796] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-12-30 02:31:37.911] [RANK: 0] [info] GPS pseudo-diameter:(166) 1203-51054 [2024-12-30 02:31:37.924] [RANK: 0] [info] Create topology (single cell type) [2024-12-30 02:31:37.924] [RANK: 0] [info] Create topology (generalised) [2024-12-30 02:31:37.933] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-12-30 02:31:37.933] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-12-30 02:31:37.954] [RANK: 0] [info] Compute ghost indices [2024-12-30 02:31:37.954] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-12-30 02:31:37.954] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-12-30 02:31:37.962] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:37.963] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:37.987] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:37.989] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:37.989] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:37.989] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:38.004] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-12-30 02:31:38.004] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-12-30 02:31:38.004] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-12-30 02:31:38.006] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:38.006] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:38.006] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-12-30 02:31:38.008] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:38.008] [RANK: 0] [info] Cell type: 0 dofmap: 53215x4 [2024-12-30 02:31:38.023] [RANK: 0] [info] Global index computation [2024-12-30 02:31:38.023] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:38.024] [RANK: 0] [info] Get global indices [2024-12-30 02:31:38.025] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:38.025] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times [2024-12-30 02:31:38.032] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-12-30 02:31:38.135] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:38.135] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:38.204] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:38.204] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:38.213] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:38.213] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-12-30 02:31:38.218] [RANK: 0] [info] Checking required entities per dimension [2024-12-30 02:31:38.218] [RANK: 0] [info] Cell type: 0 dofmap: 53215x4 [2024-12-30 02:31:38.233] [RANK: 0] [info] Global index computation [2024-12-30 02:31:38.233] [RANK: 0] [info] Got 1 index_maps [2024-12-30 02:31:38.234] [RANK: 0] [info] Get global indices [2024-12-30 02:31:38.235] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-12-30 02:31:38.235] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-12-30 02:31:38.237] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:38.239] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-12-30 02:31:38.239] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-12-30 02:31:38.367] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-12-30 02:31:38.367] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) [2024-12-30 02:31:38.418] [RANK: 0] [info] Column ghost size increased from 486 to 1302 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-5+b1 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.22.2, Nov 28, 2024 Problem type: poisson Scaling type: strong Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- [2024-12-30 02:31:38.569] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 8.650000 8.650000 Build dofmap data | 2 0.020000 0.040000 Build sparsity | 1 0.040000 0.040000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.180000 0.180000 Compute graph partition (SCOTCH) | 1 8.180000 8.180000 Compute local part of mesh dual graph (mixed) | 2 0.120000 0.240000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.100000 0.100000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 Init MPI | 1 0.020000 0.020000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.020000 0.040000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.480000 0.480000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 8.180000 8.180000 SparsityPattern::finalize | 1 0.030000 0.030000 Topology: create | 1 0.090000 0.090000 Topology: determine shared index ownership | 1 0.030000 0.030000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble | 1 0.330000 0.330000 ZZZ Assemble matrix | 1 0.120000 0.120000 ZZZ Assemble vector | 1 0.030000 0.030000 ZZZ Create Mesh | 1 8.650000 8.650000 ZZZ Create RHS function | 1 0.120000 0.120000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.180000 0.180000 ZZZ FunctionSpace | 1 0.020000 0.020000 ZZZ Solve | 1 0.490000 0.490000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named ionos2-i386 with 3 processes, by pbuilder1 on Mon Dec 30 02:31:39 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total Time (sec): 9.667e+00 1.000 9.667e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.525e+06 1.023 3.489e+06 1.047e+07 Flops/sec: 3.647e+05 1.023 3.609e+05 1.083e+06 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.847e+05 1.132 5.898e+03 5.308e+05 MPI Reductions: 3.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 9.6665e+00 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.898e+03 100.0% 1.500e+01 46.9% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 3.3640e-02 259.8 0.00e+00 0.0 2.4e+01 4.0e+00 0.0e+00 0 0 27 0 0 0 0 27 0 0 0 BuildTwoSidedF 2 1.0 3.3741e-02 140.5 0.00e+00 0.0 1.2e+01 2.2e+04 0.0e+00 0 0 13 50 0 0 0 13 50 0 0 MatMult 7 1.0 1.2333e-02 1.2 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 465 MatConvert 1 1.0 1.5772e-02 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 6 0 0 0 0 13 0 MatAssemblyBegin 5 1.0 3.6409e-02 11.5 0.00e+00 0.0 1.2e+01 2.2e+04 0.0e+00 0 0 13 50 0 0 0 13 50 0 0 MatAssemblyEnd 5 1.0 8.4761e-03 1.1 3.72e+03 1.2 1.2e+01 1.4e+03 1.0e+00 0 0 13 3 3 0 0 13 3 7 1 MatGetRowIJ 4 1.0 1.3885e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 3.0841e-04 3.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetPreallCOO 2 1.0 3.7810e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 4.3838e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 2.5263e-03 4.7 3.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 9 0 0 0 0 9 0 0 0 377 VecNorm 8 1.0 1.0477e-03 3.5 1.60e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 5 0 0 0 0 5 0 0 0 455 VecCopy 2 1.0 2.5059e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 2.2421e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 7.9454e-04 1.3 2.80e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1050 VecAYPX 6 1.0 5.5564e-04 1.3 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 643 VecScatterBegin 7 1.0 3.5278e-04 1.2 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 2.0279e-04 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 7.9242e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 2.6128e-04 1.0 0.00e+00 0.0 3.6e+01 8.2e+02 0.0e+00 0 0 40 6 0 0 0 40 6 0 0 SFPack 7 1.0 1.0549e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 7.9990e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 2.5909e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.2972e-01 1.0 2.81e+06 1.0 4.2e+01 5.7e+03 0.0e+00 2 80 47 45 0 2 80 47 45 0 36 PCSetUp 1 1.0 2.4924e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 3 0 0 0 6 3 0 0 0 13 0 PCApply 8 1.0 2.1456e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 1 1 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 5.734e-07 Average time for MPI_Barrier(): 3.1164e-06 Average time for zero size MPI_Send(): 6.71467e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-12-12 12:14:26 on reproducible Machine characteristics: Linux-6.1.0-28-amd64-i686-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.22/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.22.2+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.22/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lsuperlu_dist -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpichfort -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src cd obj-i686-linux-gnu && make -j11 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp/usr/bin/dolfinx-scaling-test make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-i686-linux-gnu' dh_install -O--buildsystem=cmake -O--sourcedirectory=src dh_installdocs -O--buildsystem=cmake -O--sourcedirectory=src dh_installchangelogs -O--buildsystem=cmake -O--sourcedirectory=src dh_installman -O--buildsystem=cmake -O--sourcedirectory=src dh_installsystemduser -O--buildsystem=cmake -O--sourcedirectory=src dh_perl -O--buildsystem=cmake -O--sourcedirectory=src dh_link -O--buildsystem=cmake -O--sourcedirectory=src dh_strip_nondeterminism -O--buildsystem=cmake -O--sourcedirectory=src dh_compress -O--buildsystem=cmake -O--sourcedirectory=src dh_fixperms -O--buildsystem=cmake -O--sourcedirectory=src dh_missing -O--buildsystem=cmake -O--sourcedirectory=src dh_dwz -a -O--buildsystem=cmake -O--sourcedirectory=src dh_strip -a -O--buildsystem=cmake -O--sourcedirectory=src dh_makeshlibs -a -O--buildsystem=cmake -O--sourcedirectory=src dh_shlibdeps -a -O--buildsystem=cmake -O--sourcedirectory=src dh_installdeb -O--buildsystem=cmake -O--sourcedirectory=src dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.9.0-2_all.deb'. dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.9.0-2_i386.deb'. dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.9.0-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.9.0-2_i386.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.9.0-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6670 and its subdirectories I: Current time: Mon Dec 30 02:31:57 -12 2024 I: pbuilder-time-stamp: 1735569117 Mon Dec 30 14:31:58 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Mon Dec 30 14:31:58 UTC 2024 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Mon Dec 30 16:15:40 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. Mon Dec 30 16:15:41 UTC 2024 I: fenicsx-performance-tests_0.9.0-2_i386.changes: Format: 1.8 Date: Wed, 06 Nov 2024 07:19:30 +0000 Source: fenicsx-performance-tests Binary: fenicsx-performance-tests fenicsx-performance-tests-dbgsym fenicsx-performance-tests-source Architecture: i386 all Version: 0.9.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Francesco Ballarin Description: fenicsx-performance-tests - Performance test codes for FEniCS/DOLFIN-X (binaries) fenicsx-performance-tests-source - Performance test codes for FEniCS/DOLFIN-X (source) Changes: fenicsx-performance-tests (0.9.0-2) unstable; urgency=medium . * Upload to unstable Checksums-Sha1: 282ce2e50963000b0d4905500029675ab588bf99 6166896 fenicsx-performance-tests-dbgsym_0.9.0-2_i386.deb 70201d75de6ec71f21330520c0dc9c5ada93cacf 18124 fenicsx-performance-tests-source_0.9.0-2_all.deb 1a5d39e26358c810cebc74266d3533d32cb9a939 14498 fenicsx-performance-tests_0.9.0-2_i386.buildinfo b2e3c01e6c2cb5bbbc79349c1f33004208f46b0d 290888 fenicsx-performance-tests_0.9.0-2_i386.deb Checksums-Sha256: 5e0ae3f14b3f2da093a7b5fcf0d990c042e4ccda1c8f8f597bf2ce233148a913 6166896 fenicsx-performance-tests-dbgsym_0.9.0-2_i386.deb 780ddf0553809800fd57a1e069f987776c98ac93c1cf4396468f54e687751451 18124 fenicsx-performance-tests-source_0.9.0-2_all.deb 1a9b6960d5245fa0e4c1957c9f859b6f82f86c753cd7f60bd96c6000645106bc 14498 fenicsx-performance-tests_0.9.0-2_i386.buildinfo 6e256ff7eb92810de0f188bd9023ae1bfc09f64e7084962f24c2525fca8e774f 290888 fenicsx-performance-tests_0.9.0-2_i386.deb Files: 934d911bd507e6b0691cde055c5a9cb7 6166896 debug optional fenicsx-performance-tests-dbgsym_0.9.0-2_i386.deb eccf4d16cdeb02a8ba0606a6b5636d72 18124 libdevel optional fenicsx-performance-tests-source_0.9.0-2_all.deb fb771dd2b6957af27381b49f474124df 14498 libdevel optional fenicsx-performance-tests_0.9.0-2_i386.buildinfo 7c397d8513d1bda48a1af9922c65a7a4 290888 libdevel optional fenicsx-performance-tests_0.9.0-2_i386.deb Mon Dec 30 16:15:42 UTC 2024 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_3-49901.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/fenicsx-performance-tests_0.9.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/fenicsx-performance-tests_0.9.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/fenicsx-performance-tests_0.9.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/b1/fenicsx-performance-tests_0.9.0-2_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.jpLoOJkQ/b2/fenicsx-performance-tests_0.9.0-2_i386.changes ## close_archive (total time: 0.000s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 302.151s) 157.609s 1082 calls readelf 122.041s 127 calls diff 20.962s 220 calls objdump 0.836s 2 calls objcopy 0.493s 20 calls xz 0.209s 22 calls strings 0.001s 17 calls cmp (internal) ## compare_files (cumulative) (total time: 855.637s) 163.793s 1 call abc.DotChangesFile 163.761s 2 calls abc.DebFile 163.676s 4 calls abc.XzFile 163.338s 2 calls abc.DebDataTarFile 162.761s 2 calls abc.ElfFile 36.288s 10 calls diffoscope.comparators.elf.ElfCodeSection 0.975s 37 calls diffoscope.comparators.elf.ElfSection 0.952s 3 calls diffoscope.comparators.elf.ElfStringSection 0.057s 2 calls abc.TarFile 0.017s 1 call abc.TextFile 0.010s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection 0.008s 2 calls abc.Md5sumsFile ## container_extract (total time: 0.615s) 0.493s 20 calls diffoscope.comparators.xz.XzContainer 0.058s 16 calls diffoscope.comparators.deb.DebTarContainer 0.056s 24 calls diffoscope.comparators.deb.DebContainer 0.008s 18 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.275s) 0.275s 250 calls linediff ## has_same_content_as (total time: 0.003s) 0.000s 4 calls abc.TextFile 0.000s 4 calls abc.Md5sumsFile 0.000s 2 calls abc.DebDataTarFile 0.000s 3 calls abc.DebFile 0.000s 37 calls diffoscope.comparators.elf.ElfSection 0.000s 4 calls abc.XzFile 0.000s 2 calls abc.ElfFile 0.000s 2 calls abc.TarFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 10 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 3 calls diffoscope.comparators.elf.ElfStringSection 0.000s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 164.906s) 164.906s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.718s) 0.680s 1 call html 0.021s 1 call text 0.016s 1 call json ## recognizes (total time: 0.585s) 0.270s 900 calls diffoscope.comparators.utils.archive.ArchiveMember 0.198s 1808 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.073s 12 calls diffoscope.comparators.binary.FilesystemFile 0.043s 324 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.116s) 0.116s 74 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 2min 45.223s CPU time consumed: 3min 37.329s Mon Dec 30 16:18:27 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Mon Dec 30 16:18:27 UTC 2024 E: fenicsx-performance-tests failed to build reproducibly in trixie on i386. Mon Dec 30 16:18:29 UTC 2024 I: Submitting .buildinfo files to external archives: Mon Dec 30 16:18:29 UTC 2024 I: Submitting 16K b1/fenicsx-performance-tests_0.9.0-2_i386.buildinfo.asc Mon Dec 30 16:18:40 UTC 2024 I: Submitting 16K b2/fenicsx-performance-tests_0.9.0-2_i386.buildinfo.asc Mon Dec 30 16:18:42 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Dec 30 16:18:42 UTC 2024 I: Done submitting .buildinfo files. Mon Dec 30 16:18:42 UTC 2024 I: Removing signed fenicsx-performance-tests_0.9.0-2_i386.buildinfo.asc files: removed './b1/fenicsx-performance-tests_0.9.0-2_i386.buildinfo.asc' removed './b2/fenicsx-performance-tests_0.9.0-2_i386.buildinfo.asc'