Mon Feb 17 03:55:40 UTC 2025 I: starting to build fitgcp/trixie/i386 on jenkins on '2025-02-17 03:55' Mon Feb 17 03:55:40 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_7/57143/console.log Mon Feb 17 03:55:40 UTC 2025 I: Downloading source for trixie/fitgcp=0.0.20150429-5 --2025-02-17 03:55:40-- http://deb.debian.org/debian/pool/main/f/fitgcp/fitgcp_0.0.20150429-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2068 (2.0K) [text/prs.lines.tag] Saving to: ‘fitgcp_0.0.20150429-5.dsc’ 0K .. 100% 206M=0s 2025-02-17 03:55:40 (206 MB/s) - ‘fitgcp_0.0.20150429-5.dsc’ saved [2068/2068] Mon Feb 17 03:55:40 UTC 2025 I: fitgcp_0.0.20150429-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: fitgcp Binary: fitgcp Architecture: all Version: 0.0.20150429-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://sourceforge.net/projects/fitgcp/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/fitgcp Vcs-Git: https://salsa.debian.org/med-team/fitgcp.git Testsuite: autopkgtest Testsuite-Triggers: python3-matplotlib Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-pysam Package-List: fitgcp deb science optional arch=all Checksums-Sha1: 6574f35714dc0e11ffd2965351b5a739f82c1a74 8368 fitgcp_0.0.20150429.orig.tar.xz 4c0e5b710e4277450f2c9610dc10f72a8d00f3a4 3670200 fitgcp_0.0.20150429-5.debian.tar.xz Checksums-Sha256: f18c9c2155dcf7eaf0bedd349d6accbe051110a6958478fcb58507cfa062390e 8368 fitgcp_0.0.20150429.orig.tar.xz c26d831912b703be61249efaf2e039e0124b7f74d1f9cd74211fbbf173acbabb 3670200 fitgcp_0.0.20150429-5.debian.tar.xz Files: d7df77cad7148007b1b4d30f82568b50 8368 fitgcp_0.0.20150429.orig.tar.xz 855040defe4153901f1d5bf9c76be71b 3670200 fitgcp_0.0.20150429-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOtesoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHHkBAAkRuW3HKeE2f1ZfFXyKr4JftEmuXHK9sH DyRbqo0pQPosCE2M2JZc8u9mtHfv7k3/wLZLeKNdWKSpyi+2G/uPob3pfA6ng1kB wlN4SR7D7bubXfoF5ztlk3IL1dkQSYhT7zp7hwST2qgIWy50jPQVt1U9tpet6kNN Uq5E3uatMzjchCptGuXpigF7whJnt3HqeEIc5B1f9pLB6GLQx7jx1MW1RwDpX3MC dg0BKLgpjf2FesgtdBCxXTMi7TP8OhSZIjSHYpj0mD7Lwk4Q3wuzTBzely9BLeV7 PWT8ZstLFoWRoxuDinN3NPZVVjUJQIdpyTM0sumk46JRzHYZfafXXnGhAlE29OcP Ma3gkC/C6nAnwpeDb5eECaTEZJgraJd61P+KkHwzw4ApwzHIFqsZcqwMHOomlKxT lBqf6fbuhqlEjz8v/GyiUHaNWEhZPRpN1i1VRtgqKO6OS0w8JuhDd3zM+JUQsZKE kN/6LxlAB+et0OyQnxeUNwDQk01x17AN768OMZ1sFsqnTbcsqRr2TbgDloodvp4k rXXCFkrZa75wHYlF+qDq9mq9/jrM6OZtGr/Eh1yoAe7+WWcaF5YHh1QBNCCkZJpT 6lsr2Bkfkn2SPXr/WXFNpvNykPUWvdG5Un5xxP9qgoasQjDpK8MYLPmpLanqA4IV /kbTE4DrLfc= =APfd -----END PGP SIGNATURE----- Mon Feb 17 03:55:40 UTC 2025 I: Checking whether the package is not for us Mon Feb 17 03:55:40 UTC 2025 I: Starting 1st build on remote node ionos12-i386.debian.net. Mon Feb 17 03:55:40 UTC 2025 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Mon Feb 17 03:57:04 UTC 2025 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Feb 16 15:55:42 -12 2025 I: pbuilder-time-stamp: 1739764542 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fitgcp_0.0.20150429-5.dsc] I: copying [./fitgcp_0.0.20150429.orig.tar.xz] I: copying [./fitgcp_0.0.20150429-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./fitgcp_0.0.20150429-5.dsc: unsupported subcommand dpkg-source: info: extracting fitgcp in fitgcp-0.0.20150429 dpkg-source: info: unpacking fitgcp_0.0.20150429.orig.tar.xz dpkg-source: info: unpacking fitgcp_0.0.20150429-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch dpkg-source: info: applying 2to3_additions.patch dpkg-source: info: applying numpy_1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/34464/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='255b0b2b505e41399afe85a17f337b4d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='34464' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/pbuilderrc_fZib --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/b1 --logfile b1/build.log fitgcp_0.0.20150429-5.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/34464/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-pysam dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19794 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-pysam{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 38.1 MB of archives. After unpacking 167 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.13-minimal i386 3.13.2-1 [859 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.13-minimal i386 3.13.2-1 [2266 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.13.1-2 [27.0 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-6 [257 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libpython3.13-stdlib i386 3.13.2-1 [1985 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 python3.13 i386 3.13.2-1 [745 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.13.1-2 [9952 B] Get: 14 http://deb.debian.org/debian trixie/main i386 python3 i386 3.13.1-2 [28.0 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.4-3 [96.2 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-5 [301 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 automake all 1:1.17-3 [862 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 autopoint all 0.23.1-1 [770 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libtool all 2.5.4-3 [539 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 36 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 debhelper all 13.24.1 [920 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 51 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 75.6.0-1 [222 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 75.6.0-1 [720 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20250108 [113 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libtasn1-6 i386 4.19.0-3+b3 [51.1 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-4 [35.0 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-4 [83.7 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 66 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-4 [354 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-4 [149 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8+b1 [20.9 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-8+b1 [61.3 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libnghttp3-9 i386 1.6.0-2 [75.9 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libngtcp2-16 i386 1.9.1-1 [151 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 libngtcp2-crypto-gnutls8 i386 1.9.1-1 [19.1 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libcurl3t64-gnutls i386 8.12.0+git20250209.89ed161+ds-1 [411 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libhtscodecs2 i386 1.6.1-1 [70.8 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libhts3t64 i386 1.21+ds-1 [506 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 python3-pysam i386 0.23.0+ds-1 [4332 kB] Fetched 38.1 MB in 1s (38.9 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19794 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-1_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.2-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.2-1_i386.deb ... Unpacking python3.13-minimal (3.13.2-1) ... Setting up libpython3.13-minimal:i386 (3.13.2-1) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.13-minimal (3.13.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20128 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.1-2_i386.deb ... Unpacking python3-minimal (3.13.1-2) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024b-6_all.deb ... Unpacking tzdata (2024b-6) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.6-1_i386.deb ... Unpacking libffi8:i386 (3.4.6-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-1_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.2-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-1_i386.deb ... Unpacking python3.13 (3.13.2-1) ... Selecting previously unselected package libpython3-stdlib:i386. 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Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up libcom-err2:i386 (1.47.2-1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-4) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-8+b1) ... Setting up tzdata (2024b-6) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Feb 17 03:56:14 UTC 2025. Universal Time is now: Mon Feb 17 03:56:14 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libunistring5:i386 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up libk5crypto3:i386 (1.21.3-4) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-8+b1) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:i386 (1.6.0-2) ... Setting up libffi8:i386 (3.4.6-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... 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Setting up python3-jaraco.text (4.0.0-1) ... Setting up libhts3t64:i386 (1.21+ds-1) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up python3-pysam (0.23.0+ds-1) ... Setting up python3-setuptools (75.6.0-1) ... Setting up dh-python (6.20250108) ... Processing triggers for libc-bin (2.40-6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fitgcp-0.0.20150429/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fitgcp_0.0.20150429-5_source.changes dpkg-buildpackage: info: source package fitgcp dpkg-buildpackage: info: source version 0.0.20150429-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/fitgcp/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/fitgcp-0.0.20150429' dh_fixperms find debian -name "*.py" -exec chmod 755 \{\} \; make[1]: Leaving directory '/build/reproducible-path/fitgcp-0.0.20150429' dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'fitgcp' in '../fitgcp_0.0.20150429-5_all.deb'. dpkg-genbuildinfo --build=binary -O../fitgcp_0.0.20150429-5_i386.buildinfo dpkg-genchanges --build=binary -O../fitgcp_0.0.20150429-5_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/34464 and its subdirectories I: Current time: Sun Feb 16 15:57:03 -12 2025 I: pbuilder-time-stamp: 1739764623 Mon Feb 17 03:57:05 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Mon Feb 17 03:57:05 UTC 2025 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Mon Feb 17 03:57:51 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. Mon Feb 17 03:57:51 UTC 2025 I: fitgcp_0.0.20150429-5_i386.changes: Format: 1.8 Date: Thu, 29 Dec 2022 11:41:12 +0100 Source: fitgcp Binary: fitgcp Architecture: all Version: 0.0.20150429-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fitgcp - fitting genome coverage distributions with mixture models Closes: 1027199 Changes: fitgcp (0.0.20150429-5) unstable; urgency=medium . * Standards-Version: 4.6.2 (routine-update) * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Archive. * Fix AttributeError: module 'numpy' has no attribute 'int' Closes: #1027199 Checksums-Sha1: 76962590be9f3bb004ba2b46bdedd835f7b36a49 3675556 fitgcp_0.0.20150429-5_all.deb c3250fb839c2c86f1958554aababefe8706ba85e 6290 fitgcp_0.0.20150429-5_i386.buildinfo Checksums-Sha256: 307132bcde037065d1602362f025c2d0fbc968351dd522c3d99b228d8ed5e437 3675556 fitgcp_0.0.20150429-5_all.deb 2d87b4003dfdfce5954cdbb127d292fb21172e98980e8785dde792099e252b12 6290 fitgcp_0.0.20150429-5_i386.buildinfo Files: a657acb87dccc3c25bda71f1017cd38e 3675556 science optional fitgcp_0.0.20150429-5_all.deb c0cbbe79d8e68126eb7f629ff72c3d12 6290 science optional fitgcp_0.0.20150429-5_i386.buildinfo Mon Feb 17 03:57:52 UTC 2025 I: diffoscope 288 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_7-57143.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/fitgcp_0.0.20150429-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/fitgcp_0.0.20150429-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/fitgcp_0.0.20150429-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/b1/fitgcp_0.0.20150429-5_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.49WqBN9x/b2/fitgcp_0.0.20150429-5_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 267ms CPU time consumed: 264ms Mon Feb 17 03:58:01 UTC 2025 I: diffoscope 288 found no differences in the changes files, and a .buildinfo file also exists. Mon Feb 17 03:58:01 UTC 2025 I: fitgcp from trixie built successfully and reproducibly on i386. Mon Feb 17 03:58:02 UTC 2025 I: Submitting .buildinfo files to external archives: Mon Feb 17 03:58:02 UTC 2025 I: Submitting 8.0K b1/fitgcp_0.0.20150429-5_i386.buildinfo.asc Mon Feb 17 03:58:03 UTC 2025 I: Submitting 8.0K b2/fitgcp_0.0.20150429-5_i386.buildinfo.asc Mon Feb 17 03:58:04 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Feb 17 03:58:04 UTC 2025 I: Done submitting .buildinfo files. Mon Feb 17 03:58:04 UTC 2025 I: Removing signed fitgcp_0.0.20150429-5_i386.buildinfo.asc files: removed './b1/fitgcp_0.0.20150429-5_i386.buildinfo.asc' removed './b2/fitgcp_0.0.20150429-5_i386.buildinfo.asc'