Sat Feb 1 05:35:48 UTC 2025 I: starting to build libbpp-phyl-omics/trixie/i386 on jenkins on '2025-02-01 05:35' Sat Feb 1 05:35:48 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_8/56787/console.log Sat Feb 1 05:35:48 UTC 2025 I: Downloading source for trixie/libbpp-phyl-omics=2.4.1-7 --2025-02-01 05:35:48-- http://deb.debian.org/debian/pool/main/libb/libbpp-phyl-omics/libbpp-phyl-omics_2.4.1-7.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2273 (2.2K) [text/prs.lines.tag] Saving to: ‘libbpp-phyl-omics_2.4.1-7.dsc’ 0K .. 100% 373M=0s 2025-02-01 05:35:48 (373 MB/s) - ‘libbpp-phyl-omics_2.4.1-7.dsc’ saved [2273/2273] Sat Feb 1 05:35:49 UTC 2025 I: libbpp-phyl-omics_2.4.1-7.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libbpp-phyl-omics Binary: libbpp-phyl-omics-dev, libbpp-phyl-omics3t64 Architecture: any Version: 2.4.1-7 Maintainer: Debian Med Packaging Team Uploaders: Julien Dutheil , Andreas Tille Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-phyl-omics Vcs-Git: https://salsa.debian.org/med-team/libbpp-phyl-omics.git Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), libbpp-phyl-dev, libbpp-seq-omics-dev Package-List: libbpp-phyl-omics-dev deb libdevel optional arch=any libbpp-phyl-omics3t64 deb libs optional arch=any Checksums-Sha1: b3132c35963eec7890514c1766b6c13f5c661a31 48482 libbpp-phyl-omics_2.4.1.orig.tar.gz f07d9e671ce92f33785fb09e6e422cb040048cb4 10632 libbpp-phyl-omics_2.4.1-7.debian.tar.xz Checksums-Sha256: fb0908422e59c71065db874e68d5c71acddf66d8a51776f7e04a5f8d5f0f6577 48482 libbpp-phyl-omics_2.4.1.orig.tar.gz 4d614b594eaf300295bc8917f4ef099983f308d8cf0cd94e1c7c5bf80e9cafcd 10632 libbpp-phyl-omics_2.4.1-7.debian.tar.xz Files: 7c1c1d06e0c0ff61ddecc7fcc4064f51 48482 libbpp-phyl-omics_2.4.1.orig.tar.gz 729df38076498102b04f2079f46081db 10632 libbpp-phyl-omics_2.4.1-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmaIG78RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEU0w/+L4emwpTj/eFImhXcCnJe0o/7cILtBJos EVyqrHF68gE0/AA65XyiSoN0jL3yFaHFWpYrjRXyODdqHtibA5FVM3N/dXziKIE2 AmHfJLKGRrysJWxoCRvS8hEI2P6NeuUonM+iJUDcy7oT8sdZgDi8HJd/W4iBUWnF YshHsHgt6oFamW6O5texvoKAZL8s71WRQw2PUXL7Rd/Rf76s+F0iqlJ9WY+wnHpP Mk+Vi6WsG1NYsNHRVUIJe+zn7DBxl4Xx0IYrIHl7OHet7SmdawkHc6V3TMcoATkA 3coeJ/CS5jTzW0elsCwcRBrdup7oow43LhGImoblIjQbjRpZ+DnqbJLJoath1AWr fkiNk48zLU0HntrDruuxNUPgja62z6VnLh+T404QFTmNgKMq8e50czDzWQhUjFfi yzOv6HH3XvliGZJ4l+ZnKv5PzKErHzzN1ARqtM12suzIHuSYPPlJwaO2q6SfsiuX V4zWw1NZXR1G1oQe6TZN7brWRe2FpqgfDI70VnzLnb90yWDxGAkyMtcNp+t6alUo 5XggAYrnJVRPBZLkGC6JwoRudjILb+wj6IaC4Bh06XIZunaZGCqZwlmtZ8v/qYDq eMilB0xb+rHNeciqogsCsjtxd/loZMGBubXTYzty/mEjehYHSWy2f7O/lutA42k9 R3I2oP67tmE= =gHC2 -----END PGP SIGNATURE----- Sat Feb 1 05:35:49 UTC 2025 I: Checking whether the package is not for us Sat Feb 1 05:35:49 UTC 2025 I: Starting 1st build on remote node ionos16-i386.debian.net. Sat Feb 1 05:35:49 UTC 2025 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Sat Feb 1 05:36:37 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Mar 5 23:58:49 -12 2026 I: pbuilder-time-stamp: 1772798329 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libbpp-phyl-omics_2.4.1-7.dsc] I: copying [./libbpp-phyl-omics_2.4.1.orig.tar.gz] I: copying [./libbpp-phyl-omics_2.4.1-7.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libbpp-phyl-omics_2.4.1-7.dsc: unsupported subcommand dpkg-source: info: extracting libbpp-phyl-omics in libbpp-phyl-omics-2.4.1 dpkg-source: info: unpacking libbpp-phyl-omics_2.4.1.orig.tar.gz dpkg-source: info: unpacking libbpp-phyl-omics_2.4.1-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying unforce-cxxflags.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/93768/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='836d3bbe93934ab7b1719990a80487a5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='93768' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/pbuilderrc_ZBdt --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/b1 --logfile b1/build.log libbpp-phyl-omics_2.4.1-7.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-30-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.124-1 (2025-01-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/93768/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), libbpp-phyl-dev, libbpp-seq-omics-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19834 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.106~); however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on libbpp-phyl-dev; however: Package libbpp-phyl-dev is not installed. pbuilder-satisfydepends-dummy depends on libbpp-seq-omics-dev; however: Package libbpp-seq-omics-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbpp-core-dev{a} libbpp-core4t64{a} libbpp-phyl-dev{a} libbpp-phyl12t64{a} libbpp-seq-dev{a} libbpp-seq-omics-dev{a} libbpp-seq-omics3t64{a} libbpp-seq12t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 68 newly installed, 0 to remove and 0 not upgraded. Need to get 50.7 MB of archives. After unpacking 211 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.4-1 [96.1 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-5 [301 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 autopoint all 0.23.1-1 [770 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.31.4-2 [2267 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 23 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[205 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libtasn1-6 i386 4.19.0-3+b3 [51.1 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libgnutls30t64 i386 3.8.8-2 [1451 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.11.1-1+b1 [393 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libuv1t64 i386 1.48.0-7 [157 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 cmake i386 3.31.4-2 [13.1 MB] Get: 48 http://deb.debian.org/debian trixie/main i386 d-shlibs all 0.109 [11.1 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libtool all 2.5.4-2 [539 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get: 55 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 debhelper all 13.24.1 [920 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libbpp-core4t64 i386 2.4.1-13+b1 [664 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libbpp-core-dev i386 2.4.1-13+b1 [1008 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libbpp-seq12t64 i386 2.4.1-13 [540 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libbpp-phyl12t64 i386 2.4.1-11+b2 [1776 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 libbpp-seq-dev i386 2.4.1-13 [784 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 libbpp-phyl-dev i386 2.4.1-11+b2 [3126 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libbpp-seq-omics3t64 i386 2.4.1-12 [243 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libbpp-seq-omics-dev i386 2.4.1-12 [394 kB] Fetched 50.7 MB in 1s (56.9 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19834 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-7_i386.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbpp-phyl-omics_2.4.1-7_source.changes dpkg-buildpackage: info: source package libbpp-phyl-omics dpkg-buildpackage: info: source version 2.4.1-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:8 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- bpp-core 4.1.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-core.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-seq.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-seq-omics 3.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-seq-omics.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-seq-omics.so.3.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-phyl.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done (0.3s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu dh_auto_build cd obj-i686-linux-gnu && make -j22 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbpp-phyl-omics-2.4.1 -B/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' make -f src/CMakeFiles/bpp-phyl-omics-static.dir/build.make src/CMakeFiles/bpp-phyl-omics-static.dir/depend make -f src/CMakeFiles/bpp-phyl-omics-shared.dir/build.make src/CMakeFiles/bpp-phyl-omics-shared.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-phyl-omics-2.4.1 /build/reproducible-path/libbpp-phyl-omics-2.4.1/src /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src/CMakeFiles/bpp-phyl-omics-static.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-phyl-omics-2.4.1 /build/reproducible-path/libbpp-phyl-omics-2.4.1/src /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src/CMakeFiles/bpp-phyl-omics-shared.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' make -f src/CMakeFiles/bpp-phyl-omics-static.dir/build.make src/CMakeFiles/bpp-phyl-omics-static.dir/build make -f src/CMakeFiles/bpp-phyl-omics-shared.dir/build.make src/CMakeFiles/bpp-phyl-omics-shared.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' [ 5%] Building CXX object src/CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.cpp.o [ 10%] Building CXX object src/CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o [ 15%] Building CXX object src/CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.cpp.o [ 25%] Building CXX object src/CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.cpp.o [ 25%] Building CXX object src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o [ 35%] Building CXX object src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.cpp.o [ 35%] Building CXX object src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.cpp.o [ 45%] Building CXX object src/CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.cpp.o [ 45%] Building CXX object src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.cpp.o [ 50%] Building CXX object src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.cpp.o cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-phyl-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-phyl-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT 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/build/reproducible-path/libbpp-phyl-omics-2.4.1/src/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.cpp cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/c++ -Dbpp_phyl_omics_shared_EXPORTS -I/build/reproducible-path/libbpp-phyl-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-phyl-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o -MF CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o.d -o CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o -c /build/reproducible-path/libbpp-phyl-omics-2.4.1/src/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp [ 70%] Building CXX object 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/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/c++ -Dbpp_phyl_omics_shared_EXPORTS -I/build/reproducible-path/libbpp-phyl-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-phyl-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp.o -MF CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp.o.d -o CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp.o -c /build/reproducible-path/libbpp-phyl-omics-2.4.1/src/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/c++ -Dbpp_phyl_omics_shared_EXPORTS -I/build/reproducible-path/libbpp-phyl-omics-2.4.1/src -g -O2 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CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.cpp.o -c /build/reproducible-path/libbpp-phyl-omics-2.4.1/src/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.cpp [ 95%] Linking CXX static library libbpp-phyl-omics.a cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/bpp-phyl-omics-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-phyl-omics-static.dir/link.txt --verbose=1 /usr/bin/ar qc libbpp-phyl-omics.a "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/FilterTreeMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/OutputTreeMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-static.dir/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.cpp.o" /usr/bin/ranlib libbpp-phyl-omics.a make[3]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' [ 95%] Built target bpp-phyl-omics-static [100%] Linking CXX shared library libbpp-phyl-omics.so cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-phyl-omics-shared.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-phyl-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,--dependency-file=CMakeFiles/bpp-phyl-omics-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libbpp-phyl-omics.so.3 -o libbpp-phyl-omics.so.3.0.0 "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountClustersMafStatistics.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/FilterTreeMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/OutputTreeMafIterator.cpp.o" "CMakeFiles/bpp-phyl-omics-shared.dir/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.cpp.o" /usr/lib/i386-linux-gnu/libbpp-seq-omics.so.3.0.0 /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 cd /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libbpp-phyl-omics.so.3.0.0 libbpp-phyl-omics.so.3 libbpp-phyl-omics.so make[3]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' [100%] Built target bpp-phyl-omics-shared make[2]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-i686-linux-gnu && make -j22 install DESTDIR=/build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbpp-phyl-omics-2.4.1 -B/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-config.cmake -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-config-version.cmake -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.a -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3.0.0 -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3 -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/AbstractDistanceEstimationMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/CountClustersMafStatistics.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/FilterTreeMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OutputTreeMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/AbstractPhylogenyReconstructionMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/include/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.h -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-targets.cmake -- Installing: /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-targets-none.cmake make[1]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1/obj-i686-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1' dh_install d-shlibmove --commit \ --t64 \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev debian/tmp/usr/lib/*/cmake usr/lib/i386-linux-gnu \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libbpp-core-dev package exists. --> libbpp-phyl-dev package exists. --> libbpp-seq-dev package exists. --> libbpp-seq-omics-dev package exists. set -e install -d -m 755 debian/libbpp-phyl-omics-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/libbpp-phyl-omics3t64/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.a debian/libbpp-phyl-omics-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so debian/libbpp-phyl-omics-dev/usr/lib/i386-linux-gnu mv /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3 debian/libbpp-phyl-omics3t64/usr/lib/i386-linux-gnu mv /build/reproducible-path/libbpp-phyl-omics-2.4.1/debian/tmp/usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3.0.0 debian/libbpp-phyl-omics3t64/usr/lib/i386-linux-gnu PKGDEV=libbpp-phyl-omics-dev PKGSHL=libbpp-phyl-omics3t64 install -d -m 755 debian/libbpp-phyl-omics-dev/usr/include mv debian/tmp/usr/include/Bpp debian/libbpp-phyl-omics-dev/usr/include install -d -m 755 debian/libbpp-phyl-omics-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/cmake debian/libbpp-phyl-omics-dev/usr/lib/i386-linux-gnu make[1]: Leaving directory '/build/reproducible-path/libbpp-phyl-omics-2.4.1' dh_installdocs dh_installchangelogs dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbpp-phyl-omics-dev' in '../libbpp-phyl-omics-dev_2.4.1-7_i386.deb'. dpkg-deb: building package 'libbpp-phyl-omics3t64' in '../libbpp-phyl-omics3t64_2.4.1-7_i386.deb'. dpkg-deb: building package 'libbpp-phyl-omics3t64-dbgsym' in '../libbpp-phyl-omics3t64-dbgsym_2.4.1-7_i386.deb'. dpkg-genbuildinfo --build=binary -O../libbpp-phyl-omics_2.4.1-7_i386.buildinfo dpkg-genchanges --build=binary -O../libbpp-phyl-omics_2.4.1-7_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/93768 and its subdirectories I: Current time: Thu Mar 5 23:59:35 -12 2026 I: pbuilder-time-stamp: 1772798375 Sat Feb 1 05:36:38 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Feb 1 05:36:38 UTC 2025 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sat Feb 1 05:37:52 UTC 2025 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sat Feb 1 05:37:53 UTC 2025 I: libbpp-phyl-omics_2.4.1-7_i386.changes: Format: 1.8 Date: Fri, 05 Jul 2024 18:10:01 +0200 Source: libbpp-phyl-omics Binary: libbpp-phyl-omics-dev libbpp-phyl-omics3t64 libbpp-phyl-omics3t64-dbgsym Architecture: i386 Version: 2.4.1-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libbpp-phyl-omics-dev - Bio++ Phylogenetics library: genomics components (development fil libbpp-phyl-omics3t64 - Bio++ Phylogenetics library: genomics components Closes: 1075149 Changes: libbpp-phyl-omics (2.4.1-7) unstable; urgency=medium . * Since every GCC version bump ends up in a bug caused by the need to update symbols files we stop providing symbols for this library Closes: 1075149 * lintian-override for no-symbols-control-file * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: f23e2879462d5de9de0a4a4cb92337c852bcb321 135424 libbpp-phyl-omics-dev_2.4.1-7_i386.deb 55434355bb98e321f5c8647fe6fc22abb549608e 2400868 libbpp-phyl-omics3t64-dbgsym_2.4.1-7_i386.deb 3eaf1910c3cbd53e4af019bc2cbeb05c0abf990b 77816 libbpp-phyl-omics3t64_2.4.1-7_i386.deb 0fda1cf2f84e084b2f0b363924c15dfb0e174d0e 7004 libbpp-phyl-omics_2.4.1-7_i386.buildinfo Checksums-Sha256: 8851c489886e607a4144b4888d7ccb70518ff48178350651408504f93082d77d 135424 libbpp-phyl-omics-dev_2.4.1-7_i386.deb 357db0fc0b55c3ea892f6142c313d980be807c1e5fa67a13e92e6672a3db24b3 2400868 libbpp-phyl-omics3t64-dbgsym_2.4.1-7_i386.deb 59c527244df9fa771de08c099e5ca5d3ef73de58d16b1e2e51855283a6bd62e1 77816 libbpp-phyl-omics3t64_2.4.1-7_i386.deb f29a3e33bf360c6c0438fa4c8539cfc2489a0954d0ef2627a6c56f0c3540a15b 7004 libbpp-phyl-omics_2.4.1-7_i386.buildinfo Files: 48584bd89e3bda4efdd76d13625797ce 135424 libdevel optional libbpp-phyl-omics-dev_2.4.1-7_i386.deb 9fc7dacfbcee6b5557718eb70ef0634c 2400868 debug optional libbpp-phyl-omics3t64-dbgsym_2.4.1-7_i386.deb 7670ed7504a83028133df6538f9e22e8 77816 libs optional libbpp-phyl-omics3t64_2.4.1-7_i386.deb f298318a44db36a7c46e704f661e7923 7004 science optional libbpp-phyl-omics_2.4.1-7_i386.buildinfo Sat Feb 1 05:37:54 UTC 2025 I: diffoscope 286 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_8-56787.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/libbpp-phyl-omics_2.4.1-7.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/libbpp-phyl-omics_2.4.1-7.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/libbpp-phyl-omics_2.4.1-7.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/b1/libbpp-phyl-omics_2.4.1-7_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.cINdAnvt/b2/libbpp-phyl-omics_2.4.1-7_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 226ms CPU time consumed: 226ms Sat Feb 1 05:37:54 UTC 2025 I: diffoscope 286 found no differences in the changes files, and a .buildinfo file also exists. Sat Feb 1 05:37:54 UTC 2025 I: libbpp-phyl-omics from trixie built successfully and reproducibly on i386. Sat Feb 1 05:37:56 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Feb 1 05:37:56 UTC 2025 I: Submitting 8.0K b1/libbpp-phyl-omics_2.4.1-7_i386.buildinfo.asc Sat Feb 1 05:37:56 UTC 2025 I: Submitting 8.0K b2/libbpp-phyl-omics_2.4.1-7_i386.buildinfo.asc Sat Feb 1 05:37:57 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Feb 1 05:37:57 UTC 2025 I: Done submitting .buildinfo files. Sat Feb 1 05:37:57 UTC 2025 I: Removing signed libbpp-phyl-omics_2.4.1-7_i386.buildinfo.asc files: removed './b1/libbpp-phyl-omics_2.4.1-7_i386.buildinfo.asc' removed './b2/libbpp-phyl-omics_2.4.1-7_i386.buildinfo.asc'