Sun Mar 9 23:51:34 UTC 2025 I: starting to build libccp4/trixie/i386 on jenkins on '2025-03-09 23:51' Sun Mar 9 23:51:34 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_12/42918/console.log Sun Mar 9 23:51:34 UTC 2025 I: Downloading source for trixie/libccp4=8.0.0-4 --2025-03-09 23:51:34-- http://deb.debian.org/debian/pool/main/libc/libccp4/libccp4_8.0.0-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2189 (2.1K) [text/prs.lines.tag] Saving to: ‘libccp4_8.0.0-4.dsc’ 0K .. 100% 282M=0s 2025-03-09 23:51:34 (282 MB/s) - ‘libccp4_8.0.0-4.dsc’ saved [2189/2189] Sun Mar 9 23:51:34 UTC 2025 I: libccp4_8.0.0-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libccp4 Binary: libccp4-data, libccp4-dev, libccp4c0t64, libccp4f0t64 Architecture: any all Version: 8.0.0-4 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Andrius Merkys , Homepage: https://www.ccp4.ac.uk/ Standards-Version: 4.1.5 Vcs-Browser: https://salsa.debian.org/science-team/libccp4 Vcs-Git: https://salsa.debian.org/science-team/libccp4.git Build-Depends: debhelper-compat (= 13), gfortran, libmmdb2-dev, m4 Package-List: libccp4-data deb libdevel optional arch=all libccp4-dev deb libdevel optional arch=any libccp4c0t64 deb libs optional arch=any libccp4f0t64 deb libs optional arch=any Checksums-Sha1: 71b2b3e9879feee4257a6d7705e0804c8858d162 937534 libccp4_8.0.0.orig.tar.gz 37f7ef8362f464860f75671db5e99152ed10c550 5472 libccp4_8.0.0-4.debian.tar.xz Checksums-Sha256: cb813ae86612a0866329deab7cee96eac573d81be5b240341d40f9ad5322ff2d 937534 libccp4_8.0.0.orig.tar.gz 6933e2a1fe23bb4380053c2e2cef1857cd53524d3909c8de2eeadc9b3297061f 5472 libccp4_8.0.0-4.debian.tar.xz Files: 88a97bace251d8b8d38e7db1feaf64cf 937534 libccp4_8.0.0.orig.tar.gz 985c93db74c53b2298ceb59766ff371a 5472 libccp4_8.0.0-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmbyhgkSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHhS8P/1Fp/FlvvoPsAtwGq95ne5/KeP2ebKJe 2sQ4c88XGlgC6K545B/BnhDMYfwzlNBB8Lez0WeW5cJ1SIPIYLzXOniJ3JFlPJ7b GWSmng1hA051A4Y1rK/j/f8vgrvCoI0gobCeBrRyPeZjX3y/XUMh8JZfzmjyrBYg YQyyTk1rZ37pl0pEHrl7+gywXCHif1yiDPnllpA2rKK+T2+G0qDkdJ6WcrnLBPg5 IFxbOCw+ft0feVuWk1Fr7nkGoxIBiwTRuU5tlV3XASEt45Fp/yTY9rKKK7MJVh2k YNh/UuHjFNxq2AULmx5uAj+ue+XsFf8utXbe2cYIsDXCBOZXiU2iBGAt28reudKJ ji4Ury2Jkvgl8WniVA+pcm+hHpsFfeb9xA/OfXt8K3XV+DJJWbB/jsca+jpiXRPJ CdtOuW1JHvetnNr8PnctCKLOq3pe27SIJwxuJ5NKrG2iNtRvJgrBrL01bO/DYg9x bkDPG0Mve0GXDpf+0Zjit9rrzTXeu+qaMIk42oxpiKENTiVEYn6d6v1KhT5EAXpL C2wd+49+vh2E2/HY2xbn2vp84rdGEUFVeobzDXXOVfSHWC3UNVG78ukJOHqGpNRq 12EESqktOaM1PT4aTAyb2wZJJ/GjwzTjLQD49hiMccqVySmXljmrPW+3Iy7djVb/ H+BPKhh/DUpq =0Ypi -----END PGP SIGNATURE----- Sun Mar 9 23:51:34 UTC 2025 I: Checking whether the package is not for us Sun Mar 9 23:51:34 UTC 2025 I: Starting 1st build on remote node ionos12-i386.debian.net. Sun Mar 9 23:51:34 UTC 2025 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Sun Mar 9 23:52:43 UTC 2025 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 9 11:51:36 -12 2025 I: pbuilder-time-stamp: 1741564296 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libccp4_8.0.0-4.dsc] I: copying [./libccp4_8.0.0.orig.tar.gz] I: copying [./libccp4_8.0.0-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libccp4_8.0.0-4.dsc: unsupported subcommand dpkg-source: info: extracting libccp4 in libccp4-8.0.0 dpkg-source: info: unpacking libccp4_8.0.0.orig.tar.gz dpkg-source: info: unpacking libccp4_8.0.0-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-fix-ftbfs-with-gcc-10.patch dpkg-source: info: applying 0002-endianness.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/37917/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='4535ff0450c24f07866b9890ef6124b3' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='37917' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/pbuilderrc_I2G3 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/b1 --logfile b1/build.log libccp4_8.0.0-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/37917/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), gfortran, libmmdb2-dev, m4 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19787 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on libmmdb2-dev; however: Package libmmdb2-dev is not installed. pbuilder-satisfydepends-dummy depends on m4; however: Package m4 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmmdb2-0{a} libmmdb2-dev{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 35.3 MB of archives. After unpacking 130 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-7 [301 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b2 [734 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-17 [735 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libgfortran-14-dev i386 14.2.0-17 [800 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-17 [12.5 MB] Get: 34 http://deb.debian.org/debian trixie/main i386 gfortran-14 i386 14.2.0-17 [14.0 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 gfortran-i686-linux-gnu i386 4:14.2.0-1 [1280 B] Get: 36 http://deb.debian.org/debian trixie/main i386 gfortran i386 4:14.2.0-1 [1432 B] Get: 37 http://deb.debian.org/debian trixie/main i386 libmmdb2-0 i386 2.0.22-1+b2 [370 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libmmdb2-dev i386 2.0.22-1+b2 [92.9 kB] Fetched 35.3 MB in 1s (48.6 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19787 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../23-libunistring5_1.3-1_i386.deb ... Unpacking libunistring5:i386 (1.3-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../24-libicu72_72.1-6_i386.deb ... Unpacking libicu72:i386 (72.1-6) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../30-libgfortran5_14.2.0-17_i386.deb ... Unpacking libgfortran5:i386 (14.2.0-17) ... Selecting previously unselected package libgfortran-14-dev:i386. Preparing to unpack .../31-libgfortran-14-dev_14.2.0-17_i386.deb ... Unpacking libgfortran-14-dev:i386 (14.2.0-17) ... Selecting previously unselected package gfortran-14-i686-linux-gnu. Preparing to unpack .../32-gfortran-14-i686-linux-gnu_14.2.0-17_i386.deb ... Unpacking gfortran-14-i686-linux-gnu (14.2.0-17) ... Selecting previously unselected package gfortran-14. Preparing to unpack .../33-gfortran-14_14.2.0-17_i386.deb ... Unpacking gfortran-14 (14.2.0-17) ... Selecting previously unselected package gfortran-i686-linux-gnu. Preparing to unpack .../34-gfortran-i686-linux-gnu_4%3a14.2.0-1_i386.deb ... Unpacking gfortran-i686-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gfortran. Preparing to unpack .../35-gfortran_4%3a14.2.0-1_i386.deb ... Unpacking gfortran (4:14.2.0-1) ... Selecting previously unselected package libmmdb2-0:i386. Preparing to unpack .../36-libmmdb2-0_2.0.22-1+b2_i386.deb ... Unpacking libmmdb2-0:i386 (2.0.22-1+b2) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../37-libmmdb2-dev_2.0.22-1+b2_i386.deb ... Unpacking libmmdb2-dev (2.0.22-1+b2) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-6) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libmmdb2-0:i386 (2.0.22-1+b2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:i386 (1.3-1) ... Setting up libmmdb2-dev (2.0.22-1+b2) ... Setting up autopoint (0.23.1-1) ... Setting up libgfortran5:i386 (14.2.0-17) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:i386 (14.2.0-17) ... Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libccp4-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libccp4_8.0.0-4_source.changes dpkg-buildpackage: info: source package libccp4 dpkg-buildpackage: info: source version 8.0.0-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:125: warning: AC_OUTPUT should be used without arguments. configure.ac:125: You should run autoupdate. configure.ac:9: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libccp4-8.0.0' dh_auto_configure -- --disable-static --enable-shared --datadir=/usr/share/ccp4 ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --disable-static --enable-shared --datadir=/usr/share/ccp4 checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for m4... /usr/bin/m4 configure: fortran/unix.m4 will be processed with m4 -D_gfort=1 checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking whether Fortran 77 compiler accepts -fallow-argument-mismatch... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ccp4c.pc config.status: creating ccp4f.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' dh_auto_build make -j11 make[1]: Entering directory '/build/reproducible-path/libccp4-8.0.0' m4 -D_gfort=1 fortran/unix.m4 > fortran/unix.f make all-am make[2]: Entering directory '/build/reproducible-path/libccp4-8.0.0' /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_data.lo ccp4/cmap_data.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmtzlib.lo ccp4/cmtzlib.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/ccp4_general.lo ccp4/ccp4_general.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_header.lo ccp4/cmap_header.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/csymlib.lo ccp4/csymlib.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/ccp4_parser.lo ccp4/ccp4_parser.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_labels.lo ccp4/cmap_labels.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cvecmat.lo ccp4/cvecmat.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_open.lo ccp4/cmap_open.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmtzlib.c -fPIC -DPIC -o ccp4/.libs/cmtzlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cvecmat.c -fPIC -DPIC -o ccp4/.libs/cvecmat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/ccp4_general.c -fPIC -DPIC -o ccp4/.libs/ccp4_general.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_data.c -fPIC -DPIC -o ccp4/.libs/cmap_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/csymlib.c -fPIC -DPIC -o ccp4/.libs/csymlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_open.c -fPIC -DPIC -o ccp4/.libs/cmap_open.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_header.c -fPIC -DPIC -o ccp4/.libs/cmap_header.o ccp4/ccp4_program.c: In function 'ccp4_vers_no': ccp4/ccp4_program.c:68:12: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 68 | fgets(ccp4version,MAXLEN_PROGVERSION,cfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ccp4/cmtzlib.c: In function 'MtzGetUserCellTolerance': ccp4/cmtzlib.c:207:41: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'int64_t' {aka 'long long int'} [-Wformat=] 207 | if (debug) printf(" hdrst read as %ld \n", hdrst); | ~~^ ~~~~~ | | | | | int64_t {aka long long int} | long int | %lld /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g 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-D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/library_file.lo ccp4/library_file.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/ccp4_unitcell.c -fPIC -DPIC -o ccp4/.libs/ccp4_unitcell.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/library_err.c -fPIC -DPIC -o ccp4/.libs/library_err.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_skew.c -fPIC -DPIC -o ccp4/.libs/cmap_skew.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o ccp4/library_err.c: In function 'CFile_Perror': ccp4/library_err.c:247:26: warning: comparison between pointer and zero character constant [-Wpointer-compare] 247 | if (msg == NULL || msg == '\0') colon = ""; | ^~ ccp4/library_err.c:247:22: note: did you mean to dereference the pointer? 247 | if (msg == NULL || msg == '\0') colon = ""; | ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_stats.c -fPIC -DPIC -o ccp4/.libs/cmap_stats.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/library_utils.lo ccp4/library_utils.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_close.lo ccp4/cmap_close.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/library_utils.c -fPIC -DPIC -o ccp4/.libs/library_utils.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o ccp4/pack_c.lo ccp4/pack_c.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_close.c -fPIC -DPIC -o ccp4/.libs/cmap_close.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/cmap_symop.c -fPIC -DPIC -o ccp4/.libs/cmap_symop.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c ccp4/pack_c.c -fPIC -DPIC -o ccp4/.libs/pack_c.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/ccp4_diskio_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_diskio_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/ccp4_parser_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_parser_f.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/cmaplib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmaplib_f.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/csymlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-csymlib_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/ccp4_general_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_general_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/ccp4_unitcell_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c fortran/ccp4_unitcell_f.c: In function 'ccp4uc_f_orthu_to_fracu_': fortran/ccp4_unitcell_f.c:124:3: warning: 'ccp4uc_orthu_to_fracu' reading 48 bytes from a region of size 24 [-Wstringop-overread] 124 | ccp4uc_orthu_to_fracu((const double (*)[3])rf_cmat, duo, duf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fortran/ccp4_unitcell_f.c:124:3: note: referencing argument 2 of type 'const double[6]' fortran/ccp4_unitcell_f.c:124:3: warning: 'ccp4uc_orthu_to_fracu' accessing 48 bytes in a region of size 24 [-Wstringop-overflow=] fortran/ccp4_unitcell_f.c:124:3: note: referencing argument 3 of type 'double[6]' In file included from fortran/ccp4_unitcell_f.c:26: ./ccp4/ccp4_unitcell.h:77:6: note: in a call to function 'ccp4uc_orthu_to_fracu' 77 | void ccp4uc_orthu_to_fracu(const double rf[3][3], const double uo[6], double uf[6]); | ^~~~~~~~~~~~~~~~~~~~~ fortran/ccp4_unitcell_f.c: In function 'ccp4uc_f_fracu_to_orthu_': fortran/ccp4_unitcell_f.c:143:3: warning: 'ccp4uc_orthu_to_fracu' reading 48 bytes from a region of size 24 [-Wstringop-overread] 143 | ccp4uc_orthu_to_fracu((const double (*)[3])ro_cmat, duf, duo); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fortran/ccp4_unitcell_f.c:143:3: note: referencing argument 2 of type 'const double[6]' fortran/ccp4_unitcell_f.c:143:3: warning: 'ccp4uc_orthu_to_fracu' accessing 48 bytes in a region of size 24 [-Wstringop-overflow=] fortran/ccp4_unitcell_f.c:143:3: note: referencing argument 3 of type 'double[6]' ./ccp4/ccp4_unitcell.h:77:6: note: in a call to function 'ccp4uc_orthu_to_fracu' 77 | void ccp4uc_orthu_to_fracu(const double rf[3][3], const double uo[6], double uf[6]); | ^~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/cmtzlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmtzlib_f.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -c fortran/library_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-library_f.o /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/ccplib.lo fortran/ccplib.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/fftlib.lo fortran/fftlib.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/ccplib.f -fPIC -o fortran/.libs/ccplib.o fortran/ccplib.f:1039:72: 1039 | 10 IARR1(J)=IARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1064:72: 1064 | 10 ARR1(J)=ARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/modlib.lo fortran/modlib.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o fortran/ccplib.f:1834:72: 1834 | 10 ARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1856:72: 1856 | 10 IARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1879:72: 1879 | 10 ARR1(J)=0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/fftlib.f:1252:72: 1252 | IF (K-I) 90,130,100 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/modlib.f -fPIC -o fortran/.libs/modlib.o fortran/modlib.f:256:72: 256 | DO 100 I = 1, P | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:258:72: 258 | DO 100 K = 1, R | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:259:72: 259 | DO 100 J = 1, Q | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:263:72: 263 | 100 D(I,L) = D(I,L) + A(I,J) * B(J,K) * C(K,L) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1) fortran/modlib.f:749:72: 749 | IF (M-2) 30,10,20 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/parser.lo fortran/parser.f fortran/modlib.f:1386:18: 1383 | DO 20 J = 2,M | 2 ...... 1386 | A(I,J) = A(J,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1388:16: 1383 | DO 20 J = 2,M | 2 ...... 1388 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1388:25: 1383 | DO 20 J = 2,M | 2 ...... 1388 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1441:20: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1442:16: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) 1442 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1442:25: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) 1442 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1443:14: 1440 | DO 120 I = 2,M | 2 ...... 1443 | A(I,I) = H | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/rwbrook.lo fortran/rwbrook.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/libhtml.lo fortran/libhtml.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/parser.f -fPIC -o fortran/.libs/parser.o /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/keyparse.lo fortran/keyparse.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/rwbrook.f -fPIC -o fortran/.libs/rwbrook.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o fortran/rwbrook.f:1633:72: 1633 | DO 10 J=1,4 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/rwbrook.f:1651:72: 1651 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/keyparse.f -fPIC -o fortran/.libs/keyparse.o fortran/rwbrook.f:2314:72: 2314 | DO 10 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/rwbrook.f:2320:72: 2320 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/rwbrook.f:2374:72: 2374 | 1 CELLD(I) = CELL(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/rwbrook.f:2410:72: 2410 | 1 RCEL(I) = CELLAS(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/rwbrook.f:2817:72: 2817 | DO 40 J = 1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/dna_output.lo fortran/dna_output.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pack_f.lo fortran/pack_f.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pxxml.lo fortran/pxxml.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/lgglib.lo fortran/lgglib.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plot84lib.lo fortran/plot84lib.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/dna_output.f -fPIC -o fortran/.libs/dna_output.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/pack_f.f -fPIC -o fortran/.libs/pack_f.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/lgglib.f -fPIC -o fortran/.libs/lgglib.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/pxxml.f -fPIC -o fortran/.libs/pxxml.o fortran/lgglib.f:43:72: 43 | 10 A(I)=CELL(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:51:72: 51 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:52:72: 52 | 10 A(IJ,II)=A1(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:60:72: 60 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:61:72: 61 | 10 OUT(II,IJ)=A1(II,IJ)+A2(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:80:72: 80 | 20 V(I1)=A(I,I1) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/lgglib.f:90:72: 90 | 20 VJ(I1)=A(I1,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/lgglib.f:99:72: 99 | DO 10 I2=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:100:72: 100 | 10 A(I1,I2)=A1(I1,I2)*C | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:115:72: 115 | 40 RSLT(I,IJ)=POIMULT(IN1,IM2,V1,V2) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/lgglib.f:123:72: 123 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:124:72: 124 | 10 OUT(II,IJ)=A1(II,IJ)-A2(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plotsubs.lo fortran/plotsubs.f fortran/lgglib.f:280:72: 280 | DO 20 IC=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/lgglib.f:281:72: 281 | 20 SYM(IC,4,IS)=SYM(IC,4,IS)*CELL(IC) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plot84lib.f -fPIC -o fortran/.libs/plot84lib.o fortran/lgglib.f:668:72: 668 | 10 DOSQ = DOSQ + V(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/sorting_main.lo fortran/sorting_main.f /bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/unix.lo fortran/unix.f fortran/lgglib.f:1766:72: 1766 | DO 10 I2=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:1767:72: 1767 | 10 A(I1,I2)=A1(I1,I2)*C | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:1912:72: 1912 | 10 ME(J)=J | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:1934:72: 1934 | 40 A(I,J) = A(I,J)*Y | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/lgglib.f:1957:72: 1957 | 66 A(K,J) = W | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 66 at (1) fortran/lgglib.f:1980:72: 1980 | 1 IF (TH(I).GT.180.) TH(I) = TH(I) - 360. | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/lgglib.f:2106:72: 2106 | DO 50 J = 1, N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1) fortran/lgglib.f:2107:72: 2107 | 50 DETA(I) = DETA(I) + ATA(I,J)*PHI(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1) fortran/lgglib.f:2116:72: 2116 | DO 10 J = I,N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:2117:72: 2117 | DO 10 K = 1,M | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:2118:72: 2118 | 10 ATA(I,J) = ATA(I,J) + A(K,I)*A(K,J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:2121:72: 2121 | DO 20 J = 1, I-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/lgglib.f:2122:72: 2122 | 20 ATA(I,J) = ATA(J,I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/lgglib.f:2136:72: 2136 | 30 B1(I) = POIMULT(M, M, A(1,I), PHI) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1) fortran/lgglib.f:2146:72: 2146 | DO 40 J = 1, N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) fortran/lgglib.f:2147:72: 2147 | 40 DETA(I) = DETA(I) + ATA(I,J)*B1(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/lgglib.f:2239:72: 2239 | DO 4 I=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 4 at (1) fortran/lgglib.f:2240:72: 2240 | 4 S(I,J) = 0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1) fortran/lgglib.f:2266:72: 2266 | IF(IFIELD-3) 104,104,103 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2268:72: 2268 | 103 IF(ICOL-ICOLMX) 9987,1000,1000 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2274:72: 2274 | IF (11-IFNUM) 9980,110,110 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2276:72: 2276 | 110 IF (10-IFNUM) 118,115,112 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2278:72: 2278 | 112 IF (6-IFNUM) 125,130,130 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2286:72: 2286 | IF (IFNUM-9) 122,122,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2287:72: 2287 | 122 IF (IFNUM-6) 130,130,125 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2303:72: 2303 | IF (IFNUM-6) 138,138,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2314:72: 2314 | IF(ICOL - ICOLMX) 151,151,1000 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2321:72: 2321 | 163 IF (ICOLMX+1-ICOL) 9980,1000,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2330:72: 2330 | IF(ABS(ABS(D) - 1.0) -.0001) 1001,9985,9985 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2332:72: 2332 | IF(IFIELD - 3) 9987,1002,9987 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plotsubs.f -fPIC -o fortran/.libs/plotsubs.o fortran/plotsubs.f:312:72: 312 | 1 CALL PLTDWU(X(I),Y(I)) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/plotsubs.f:352:72: 352 | IF(J) 26,26,27 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/plotsubs.f:377:72: 377 | IF(J) 30,28,20 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/unix.f -fPIC -o fortran/.libs/unix.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/sorting_main.f -fPIC -o fortran/.libs/sorting_main.o fortran/lgglib.f:3222:72: 3222 | 10 POIMULT=V1(I)*V2(I)+POIMULT | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:4072:72: 4072 | DO 5 J = 1, NATM | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 5 at (1) fortran/lgglib.f:4073:72: 4073 | 5 CALL ARRGIVE(3,EMT(1,I),VT((J-1)*3+1,I+3)) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1) fortran/lgglib.f:5842:72: 5842 | 10 C=C+V(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:1315:72: 1315 | 1 , (X(I,NATM),I=1,3) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1369:72: 1369 | 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1429:72: 1429 | 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1489:72: 1489 | 1 res(natm), (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1546:72: 1546 | 1 , (X(I,NATM),I=1,3) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1598:72: 1598 | 1 SEQ(NATM), RES(NATM), ATOM(NATM) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:2424:10: 2423 | do j = 1, 4 | 2 2424 | rt(j,4) = gt(4,j) | 1 Warning: Array reference at (1) out of bounds (4 > 3) in loop beginning at (2) fortran/plot84lib.f:6390:25: 6390 | CALL QWRITE(IUNITR,IREC,NRECL) | 1 ...... 12406 | CALL QWRITE(IUNIT,NBYTES,1) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). fortran/plot84lib.f:6473:24: 6449 | CALL QREAD(IUNITR,IREC,NRECL,IER) | 2 ...... 6473 | CALL QREAD(IUNITR,JJXY,4,IER) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). fortran/plot84lib.f:8301:22: 8301 | CALL AXIS(X,Y,HTEXT,NCHAR,AXLEN,ANGLE,FVAL,DV) | 1 Warning: Rank mismatch in argument 'label' at (1) (scalar and rank-1) fortran/plot84lib.f:10427:19: 10427 | CALL TRIPLOT(ICLEAR,1) | 1 Warning: Rank mismatch in argument 'line' at (1) (rank-1 and scalar) ccp4/cmtzlib.c: In function 'MtzPut': ccp4/cmtzlib.c:2746:27: warning: '%74s' directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] 2746 | sprintf(hdrrec,"SYMM %74s",symline); | ^~~~ ~~~~~~~ In file included from /usr/include/stdio.h:970, from ccp4/cmtzlib.c:23: In function 'sprintf', inlined from 'MtzPut' at ccp4/cmtzlib.c:2746:6: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 80 and 86 bytes into a destination of size 81 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ccp4/cmtzlib.c: In function 'MtzPut': ccp4/cmtzlib.c:2840:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~ ccp4/cmtzlib.c:2840:27: note: directive argument in the range [0, 2147483647] 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'MtzPut' at ccp4/cmtzlib.c:2840:5: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ccp4/cmtzlib.c: In function 'MtzPut': ccp4/cmtzlib.c:2842:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~ ccp4/cmtzlib.c:2842:27: note: directive argument in the range [0, 2147483647] 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'MtzPut' at ccp4/cmtzlib.c:2842:5: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-incompatible-pointer-types -no-undefined -Wl,-z,relro -o ccp4/libccp4c.la -rpath /usr/lib/i386-linux-gnu ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm libtool: link: gcc -shared -fPIC -DPIC ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -lm -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4c.so.0 -o ccp4/.libs/libccp4c.so.0.0.0 libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so.0" && ln -s "libccp4c.so.0.0.0" "libccp4c.so.0") libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so" && ln -s "libccp4c.so.0.0.0" "libccp4c.so") libtool: link: ( cd "ccp4/.libs" && rm -f "libccp4c.la" && ln -s "../libccp4c.la" "libccp4c.la" ) /bin/bash ./libtool --tag=F77 --mode=link gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm libtool: link: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -Wl,-rpath -Wl,/build/reproducible-path/libccp4-8.0.0/ccp4/.libs ccp4/.libs/libccp4c.so -lmmdb2 -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so.0" && ln -s "libccp4f.so.0.0.0" "libccp4f.so.0") libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so" && ln -s "libccp4f.so.0.0.0" "libccp4f.so") libtool: link: ( cd "fortran/.libs" && rm -f "libccp4f.la" && ln -s "../libccp4f.la" "libccp4f.la" ) make[2]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' make[1]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' dh_auto_test make -j11 check "TESTSUITEFLAGS=-j11 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libccp4-8.0.0' make check-am make[2]: Entering directory '/build/reproducible-path/libccp4-8.0.0' make[2]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' make[1]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/libccp4-8.0.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/libccp4-8.0.0' make install-am make[2]: Entering directory '/build/reproducible-path/libccp4-8.0.0' make[3]: Entering directory '/build/reproducible-path/libccp4-8.0.0' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.so.0.0.0 /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/libccp4c.so.0.0.0 libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so.0 || { rm -f libccp4c.so.0 && ln -s libccp4c.so.0.0.0 libccp4c.so.0; }; }) libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so || { rm -f libccp4c.so && ln -s libccp4c.so.0.0.0 libccp4c.so; }; }) libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.lai /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/libccp4c.la libtool: warning: relinking 'fortran/libccp4f.la' libtool: install: (cd /build/reproducible-path/libccp4-8.0.0; /bin/bash "/build/reproducible-path/libccp4-8.0.0/libtool" --tag F77 --mode=relink gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/libccp4-8.0.0/debian/tmp) libtool: relink: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -L/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu -L/usr/lib/i386-linux-gnu -lccp4c -lmmdb2 -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.so.0.0.0T /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/libccp4f.so.0.0.0 libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4f.so.0.0.0 libccp4f.so.0 || { rm -f libccp4f.so.0 && ln -s libccp4f.so.0.0.0 libccp4f.so.0; }; }) libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4f.so.0.0.0 libccp4f.so || { rm -f libccp4f.so && ln -s libccp4f.so.0.0.0 libccp4f.so; }; }) libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.lai /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/libccp4f.la libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/include/ccp4' /usr/bin/install -c -m 644 ccp4/ccp4_file_err.h ccp4/ccp4_program.h ccp4/ccp4_unitcell.h ccp4/cmap_errno.h ccp4/cmap_stats.h ccp4/csymlib.h ccp4/library_file.h ccp4/w32mvs.h ccp4/ccp4_fortran.h ccp4/ccp4_spg.h ccp4/ccp4_utils.h ccp4/cmap_header.h ccp4/cmaplib.h ccp4/cvecmat.h ccp4/mtzdata.h ccp4/ccp4_array.h ccp4/ccp4_general.h ccp4/ccp4_sysdep.h ccp4/ccp4_vars.h ccp4/cmap_labels.h ccp4/cmaplib_f.h ccp4/overview.h ccp4/ccp4_errno.h ccp4/ccp4_parser.h ccp4/ccp4_types.h ccp4/cmap_data.h ccp4/cmap_skew.h ccp4/cmtzlib.h ccp4/pack_c.h '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/include/ccp4' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/share/ccp4' /usr/bin/install -c -m 644 ccp4-config.cmake '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/share/ccp4' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/share/ccp4' /usr/bin/install -c -m 644 data/atomsf_neutron.lib data/atomsf_electron.lib data/atomsf.lib data/syminfo.lib data/symop.lib data/font84.ascii '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/share/ccp4' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 ccp4c.pc ccp4f.pc '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' make[3]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' make[2]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' make[1]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' dh_install dh_installdocs dh_installchangelogs dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/libccp4-8.0.0' dh_strip -plibccp4c0t64 dh_strip -plibccp4f0t64 dh_strip -a -Nlibccp4c0t64 -Nlibccp4f0t64 make[1]: Leaving directory '/build/reproducible-path/libccp4-8.0.0' dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libccp4-data' in '../libccp4-data_8.0.0-4_all.deb'. dpkg-deb: building package 'libccp4-dev' in '../libccp4-dev_8.0.0-4_i386.deb'. dpkg-deb: building package 'libccp4c0t64-dbgsym' in '../libccp4c0t64-dbgsym_8.0.0-4_i386.deb'. dpkg-deb: building package 'libccp4f0t64' in '../libccp4f0t64_8.0.0-4_i386.deb'. dpkg-deb: building package 'libccp4c0t64' in '../libccp4c0t64_8.0.0-4_i386.deb'. dpkg-deb: building package 'libccp4f0t64-dbgsym' in '../libccp4f0t64-dbgsym_8.0.0-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../libccp4_8.0.0-4_i386.buildinfo dpkg-genchanges --build=binary -O../libccp4_8.0.0-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/37917 and its subdirectories I: Current time: Sun Mar 9 11:52:43 -12 2025 I: pbuilder-time-stamp: 1741564363 Sun Mar 9 23:52:44 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Sun Mar 9 23:52:44 UTC 2025 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Sun Mar 9 23:53:34 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. Sun Mar 9 23:53:35 UTC 2025 I: libccp4_8.0.0-4_i386.changes: Format: 1.8 Date: Tue, 24 Sep 2024 05:25:24 -0400 Source: libccp4 Binary: libccp4-data libccp4-dev libccp4c0t64 libccp4c0t64-dbgsym libccp4f0t64 libccp4f0t64-dbgsym Architecture: all i386 Version: 8.0.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andrius Merkys Description: libccp4-data - CCP4 core functionality - common files libccp4-dev - CCP4 core functionality - development files libccp4c0t64 - CCP4 core functionality - C runtime libccp4f0t64 - CCP4 core functionality - fortran runtime Changes: libccp4 (8.0.0-4) unstable; urgency=medium . * Add a temporary work-around for #1075155. Checksums-Sha1: 8f32a19bd8a3a3d2f22d1ddd6699792a4d5435a3 62652 libccp4-data_8.0.0-4_all.deb 44674b8ca01c1a91d8766897e5804d7a31307af0 42944 libccp4-dev_8.0.0-4_i386.deb 3969a73d6b9866095e869bfca070410f562a82d0 6182 libccp4_8.0.0-4_i386.buildinfo 61f95072b4d9b5d6bd28b55db4893cb638725bcd 191720 libccp4c0t64-dbgsym_8.0.0-4_i386.deb 923598f694218d3e69a10f02a859ec65262d1af5 96372 libccp4c0t64_8.0.0-4_i386.deb 91da78ce5dc89c3400dc3fb0f573116fc94b9c73 102560 libccp4f0t64-dbgsym_8.0.0-4_i386.deb 51a0096269ae15b09530176d2416f28d02b521d7 184128 libccp4f0t64_8.0.0-4_i386.deb Checksums-Sha256: b7664593795dc1234f9796e0bf9160cfb49b524799b564cf5967d94ec43da7b6 62652 libccp4-data_8.0.0-4_all.deb 6914c1897263319d360bda8479f11c4bbb1286e958d41d4dc49e504478bf067f 42944 libccp4-dev_8.0.0-4_i386.deb ec6bed94a5eb1d370fb94bfd470fe1cc728e8017e0a1e6535d24d46fd0097fb6 6182 libccp4_8.0.0-4_i386.buildinfo bcf1aba43789e659c4448abe18d691c24c96593d882f6098628b5b9a558d2f58 191720 libccp4c0t64-dbgsym_8.0.0-4_i386.deb e7cdb4a5ecfa003d2deaa36b44cce57cd0ce866ce7c5d997ad1dcaec50829588 96372 libccp4c0t64_8.0.0-4_i386.deb 2cafaddb9767875429c0118c08dd36dfab5b3c89b9ac9703185a0609533d0106 102560 libccp4f0t64-dbgsym_8.0.0-4_i386.deb 68166f40240ffd9e1c979c55cb36d9b5d890be95556258ba6ca833314c37a67a 184128 libccp4f0t64_8.0.0-4_i386.deb Files: 4ee7ea558bf9d76700b0c184b970f024 62652 libdevel optional libccp4-data_8.0.0-4_all.deb 0a3ca73f8e2e2e088bba092d38e8e7cc 42944 libdevel optional libccp4-dev_8.0.0-4_i386.deb 9528a530ab9c9f47c4f4ff9d0b15624a 6182 science optional libccp4_8.0.0-4_i386.buildinfo 0b7b8425997f980672b7a02dc1077036 191720 debug optional libccp4c0t64-dbgsym_8.0.0-4_i386.deb 333784ff5ed15067e19e93c3e879d121 96372 libs optional libccp4c0t64_8.0.0-4_i386.deb 59551de10d5a98b835a23829c0df1e35 102560 debug optional libccp4f0t64-dbgsym_8.0.0-4_i386.deb a1b39f1603940b96b5d37a0949dddd6b 184128 libs optional libccp4f0t64_8.0.0-4_i386.deb Sun Mar 9 23:53:36 UTC 2025 I: diffoscope 289 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_12-42918.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/libccp4_8.0.0-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/libccp4_8.0.0-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/libccp4_8.0.0-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/b1/libccp4_8.0.0-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.ej2BoV5j/b2/libccp4_8.0.0-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 235ms CPU time consumed: 233ms Sun Mar 9 23:53:36 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists. Sun Mar 9 23:53:36 UTC 2025 I: libccp4 from trixie built successfully and reproducibly on i386. Sun Mar 9 23:53:37 UTC 2025 I: Submitting .buildinfo files to external archives: Sun Mar 9 23:53:37 UTC 2025 I: Submitting 8.0K b1/libccp4_8.0.0-4_i386.buildinfo.asc Sun Mar 9 23:53:38 UTC 2025 I: Submitting 8.0K b2/libccp4_8.0.0-4_i386.buildinfo.asc Sun Mar 9 23:53:39 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Mar 9 23:53:39 UTC 2025 I: Done submitting .buildinfo files. Sun Mar 9 23:53:39 UTC 2025 I: Removing signed libccp4_8.0.0-4_i386.buildinfo.asc files: removed './b1/libccp4_8.0.0-4_i386.buildinfo.asc' removed './b2/libccp4_8.0.0-4_i386.buildinfo.asc'