Tue Mar 18 18:59:11 UTC 2025  I: starting to build pymol/unstable/amd64 on jenkins on '2025-03-18 18:58'
Tue Mar 18 18:59:11 UTC 2025  I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_18/33316/console.log
Tue Mar 18 18:59:11 UTC 2025  I: Downloading source for unstable/pymol=3.1.0+dfsg-1
--2025-03-18 18:59:11--  http://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg-1.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2307 (2.3K) [text/prs.lines.tag]
Saving to: ‘pymol_3.1.0+dfsg-1.dsc’

     0K ..                                                    100%  328M=0s

2025-03-18 18:59:11 (328 MB/s) - ‘pymol_3.1.0+dfsg-1.dsc’ saved [2307/2307]

Tue Mar 18 18:59:11 UTC 2025  I: pymol_3.1.0+dfsg-1.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: pymol
Binary: pymol, python3-pymol, pymol-data
Architecture: any all
Version: 3.1.0+dfsg-1
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders: Michael Banck <mbanck@debian.org>
Homepage: https://www.pymol.org
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/debichem-team/pymol
Vcs-Git: https://salsa.debian.org/debichem-team/pymol.git
Testsuite: autopkgtest
Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev
Package-List:
 pymol deb science optional arch=all
 pymol-data deb science optional arch=all
 python3-pymol deb python optional arch=any
Checksums-Sha1:
 32396cf53f9409123ac32a96aa7fdc524e337bb7 21978280 pymol_3.1.0+dfsg.orig.tar.xz
 124b693ee1a4e309066ec2f327837d5c2ab82978 57900 pymol_3.1.0+dfsg-1.debian.tar.xz
Checksums-Sha256:
 dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d 21978280 pymol_3.1.0+dfsg.orig.tar.xz
 199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a 57900 pymol_3.1.0+dfsg-1.debian.tar.xz
Files:
 a2896da7deea2ffbd5c103d7e99f85ed 21978280 pymol_3.1.0+dfsg.orig.tar.xz
 a8321ad6758639dd10f3bc914b48c02d 57900 pymol_3.1.0+dfsg-1.debian.tar.xz

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Tue Mar 18 18:59:11 UTC 2025  I: Checking whether the package is not for us
Tue Mar 18 18:59:11 UTC 2025  I: Starting 1st build on remote node ionos5-amd64.debian.net.
Tue Mar 18 18:59:11 UTC 2025  I: Preparing to do remote build '1' on ionos5-amd64.debian.net.
Tue Mar 18 19:06:33 UTC 2025  I: Deleting $TMPDIR on ionos5-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Mon Apr 20 13:22:14 -12 2026
I: pbuilder-time-stamp: 1776734534
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [pymol_3.1.0+dfsg-1.dsc]
I: copying [./pymol_3.1.0+dfsg.orig.tar.xz]
I: copying [./pymol_3.1.0+dfsg-1.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./pymol_3.1.0+dfsg-1.dsc: unsupported subcommand
dpkg-source: info: extracting pymol in pymol-3.1.0+dfsg
dpkg-source: info: unpacking pymol_3.1.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking pymol_3.1.0+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 03_povray.patch
dpkg-source: info: applying 22_fix_pymol_import.patch
dpkg-source: info: applying 27_fix_pymol_path_in_setup.patch
dpkg-source: info: applying 28_no_data_install_in_python_path.patch
dpkg-source: info: applying 31_fix_format-security.patch
dpkg-source: info: applying 32_fix_spelling_lintian_warnings.patch
dpkg-source: info: applying 33_fix_relative_paths_in_example_scripts.patch
dpkg-source: info: applying 34_fix_examples_add_fetch_instead_of_load.patch
dpkg-source: info: applying 40_mstop_movies.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/3146162/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='amd64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 '
  DISTRIBUTION='unstable'
  HOME='/root'
  HOST_ARCH='amd64'
  IFS=' 	
  '
  INVOCATION_ID='988a0c5ecb5e48529fb39aacb08211e9'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='3146162'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/pbuilderrc_Q48R --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/b1 --logfile b1/build.log pymol_3.1.0+dfsg-1.dsc'
  SUDO_GID='110'
  SUDO_UID='105'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://213.165.73.152:3128'
I: uname -a
  Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Mar  4  2025 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/3146162/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19784 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
  Package dh-sequence-python3 is not installed.
 pbuilder-satisfydepends-dummy depends on freeglut3-dev; however:
  Package freeglut3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libfreetype-dev; however:
  Package libfreetype-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libglew-dev; however:
  Package libglew-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libglm-dev; however:
  Package libglm-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however:
  Package libnetcdf-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libpng-dev; however:
  Package libpng-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all; however:
  Package python3-all is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
  Package python3-all-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-opengl; however:
  Package python3-opengl is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pyqt5; however:
  Package python3-pyqt5 is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pyqt5.qtopengl; however:
  Package python3-pyqt5.qtopengl is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
  Package texlive-latex-base is not installed.
 pbuilder-satisfydepends-dummy depends on libxml2-dev; however:
  Package libxml2-dev is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} freeglut3-dev{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libcom-err2{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libelf1t64{a} libevdev2{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype-dev{a} libfreetype6{a} libgbm1{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglew-dev{a} libglew2.2{a} libglib2.0-0t64{a} libglm-dev{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglut-dev{a} libglut3.12{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libice-dev{a} libice6{a} libicu-dev{a} libicu76{a} libidn2-0{a} libidn2-dev{a} libinput-bin{a} libinput10{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack3{a} libldap-dev{a} libldap2{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmpfi0{a} libmtdev1t64{a} libnetcdf-dev{a} libnetcdf22{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libnghttp3-dev{a} libngtcp2-16{a} libngtcp2-crypto-gnutls-dev{a} libngtcp2-crypto-gnutls8{a} libngtcp2-dev{a} libopengl-dev{a} libopengl0{a} libp11-kit-dev{a} libp11-kit0{a} libpaper-utils{a} libpaper2{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptexenc1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsm-dev{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsynctex2{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtool{a} libuchardet0{a} libunbound8{a} libunistring5{a} libuv1t64{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt-dev{a} libxt6t64{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} nettle-dev{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-dev{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-opengl{a} python3-pkg-resources{a} python3-pyqt5{a} python3-pyqt5.qtopengl{a} python3-pyqt5.sip{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-latex-base{a} tzdata{a} ucf{a} uuid-dev{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc ca-certificates curl dbus dvisvgm javascript-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 libsasl2-modules libtasn1-doc libx11-protocol-perl linux-sysctl-defaults lmodern lynx mesa-vulkan-drivers psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 308 newly installed, 0 to remove and 0 not upgraded.
Need to get 214 MB of archives. After unpacking 834 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.2-2 [859 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.0-1 [107 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.2-2 [2210 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025a-2 [259 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [1952 kB]
Get: 12 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.2-2 [746 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get: 14 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-5 [138 kB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-2 [160 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-19 [836 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.3+ds-5 [5084 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get: 22 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-2 [337 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-2 [109 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-2 [43.5 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get: 34 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0050 [42.7 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-7 [294 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB]
Get: 39 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 40 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.6-1 [2268 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 libicu76 amd64 76.1-3 [9721 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.3+b1 [699 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1+b1 [24.3 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 49 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-2 [109 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.9+dfsg-2 [194 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.13.0~rc2-1 [380 kB]
Get: 65 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB]
Get: 68 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.6-1 [12.0 MB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2-1+b1 [56.0 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 71 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB]
Get: 72 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 76 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250308 [115 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [282 kB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 85 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 86 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 87 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.1 [318 kB]
Get: 88 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.1 [391 kB]
Get: 89 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-2.1 [463 kB]
Get: 90 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-1 [4540 kB]
Get: 91 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB]
Get: 92 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 93 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 94 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 95 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 96 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 97 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.124-1 [8180 B]
Get: 98 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.124-1 [38.9 kB]
Get: 99 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB]
Get: 100 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB]
Get: 101 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB]
Get: 102 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB]
Get: 103 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get: 104 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB]
Get: 105 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get: 106 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB]
Get: 107 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.124-1 [22.4 kB]
Get: 108 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB]
Get: 109 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.124-1 [63.8 kB]
Get: 110 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB]
Get: 111 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get: 112 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.7-3 [26.0 MB]
Get: 113 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 114 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB]
Get: 115 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB]
Get: 116 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB]
Get: 117 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b3 [8852 B]
Get: 118 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 25.0.1-2 [9619 kB]
Get: 119 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.1-3 [34.4 kB]
Get: 120 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 25.0.1-2 [44.0 kB]
Get: 121 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.4.304.0-1 [129 kB]
Get: 122 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 25.0.1-2 [45.5 kB]
Get: 123 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 25.0.1-2 [143 kB]
Get: 124 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB]
Get: 125 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB]
Get: 126 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB]
Get: 127 http://deb.debian.org/debian unstable/main amd64 libglut3.12 amd64 3.4.0-4 [139 kB]
Get: 128 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB]
Get: 129 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b3 [184 kB]
Get: 130 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 131 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB]
Get: 132 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB]
Get: 133 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB]
Get: 134 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 135 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB]
Get: 136 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB]
Get: 137 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB]
Get: 138 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB]
Get: 139 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B]
Get: 140 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b3 [223 kB]
Get: 141 http://deb.debian.org/debian unstable/main amd64 libxext-dev amd64 2:1.3.4-1+b3 [104 kB]
Get: 142 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+24 [217 kB]
Get: 143 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get: 144 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB]
Get: 145 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB]
Get: 146 http://deb.debian.org/debian unstable/main amd64 libice-dev amd64 2:1.1.1-1 [73.8 kB]
Get: 147 http://deb.debian.org/debian unstable/main amd64 uuid-dev amd64 2.40.4-5 [47.8 kB]
Get: 148 http://deb.debian.org/debian unstable/main amd64 libsm-dev amd64 2:1.2.4-1 [37.7 kB]
Get: 149 http://deb.debian.org/debian unstable/main amd64 libxt-dev amd64 1:1.2.1-1.2+b2 [407 kB]
Get: 150 http://deb.debian.org/debian unstable/main amd64 libglut-dev amd64 3.4.0-4 [163 kB]
Get: 151 http://deb.debian.org/debian unstable/main amd64 freeglut3-dev amd64 3.4.0-4 [53.4 kB]
Get: 152 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.14.5+repack-3 [26.6 kB]
Get: 153 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 76.1-3 [215 kB]
Get: 154 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-5 [60.0 kB]
Get: 155 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-5 [42.5 kB]
Get: 156 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-5 [42.6 kB]
Get: 157 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-5 [54.2 kB]
Get: 158 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-5 [126 kB]
Get: 159 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB]
Get: 160 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B]
Get: 161 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB]
Get: 162 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB]
Get: 163 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB]
Get: 164 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-2 [178 kB]
Get: 165 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB]
Get: 166 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b7 [316 kB]
Get: 167 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB]
Get: 168 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB]
Get: 169 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get: 170 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB]
Get: 171 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB]
Get: 172 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB]
Get: 173 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB]
Get: 174 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB]
Get: 175 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.13.0~rc2-1 [373 kB]
Get: 176 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB]
Get: 177 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB]
Get: 178 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.9-2 [455 kB]
Get: 179 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2 [455 kB]
Get: 180 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-2 [103 kB]
Get: 181 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB]
Get: 182 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB]
Get: 183 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB]
Get: 184 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB]
Get: 185 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.1-1 [1318 kB]
Get: 186 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.9-2 [1401 kB]
Get: 187 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-5 [16.1 kB]
Get: 188 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.6.9+dfsg-2 [311 kB]
Get: 189 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB]
Get: 190 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB]
Get: 191 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB]
Get: 192 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB]
Get: 193 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.8.0-1 [91.3 kB]
Get: 194 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.11.0-1 [34.0 kB]
Get: 195 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.11.0-1 [179 kB]
Get: 196 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB]
Get: 197 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 198 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB]
Get: 199 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.4.1-1 [2787 kB]
Get: 200 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB]
Get: 201 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-1 [371 kB]
Get: 202 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.13.0~rc2-1 [490 kB]
Get: 203 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.1-1 [41.8 kB]
Get: 204 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.1-3 [26.8 kB]
Get: 205 http://deb.debian.org/debian unstable/main amd64 libegl-mesa0 amd64 25.0.1-2 [128 kB]
Get: 206 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB]
Get: 207 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.7.0-1 [160 kB]
Get: 208 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.47-1.1 [366 kB]
Get: 209 http://deb.debian.org/debian unstable/main amd64 libfreetype-dev amd64 2.13.3+dfsg-1 [622 kB]
Get: 210 http://deb.debian.org/debian unstable/main amd64 libglew2.2 amd64 2.2.0-4+b2 [168 kB]
Get: 211 http://deb.debian.org/debian unstable/main amd64 libglew-dev amd64 2.2.0-4+b2 [246 kB]
Get: 212 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.0-2 [1513 kB]
Get: 213 http://deb.debian.org/debian unstable/main amd64 libglm-dev all 0.9.9.8+ds-8 [183 kB]
Get: 214 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 215 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-6 [14.5 kB]
Get: 216 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB]
Get: 217 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-3 [1344 kB]
Get: 218 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [133 kB]
Get: 219 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [111 kB]
Get: 220 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [69.3 kB]
Get: 221 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [43.9 kB]
Get: 222 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [24.4 kB]
Get: 223 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get: 224 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3.1 [292 kB]
Get: 225 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3.1 [72.0 kB]
Get: 226 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.14.5+repack-3 [3165 kB]
Get: 227 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 76.1-3 [10.8 MB]
Get: 228 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.14.0-1 [103 kB]
Get: 229 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.14.0-1 [25.3 kB]
Get: 230 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.27.1-1 [26.0 kB]
Get: 231 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.7-1 [22.6 kB]
Get: 232 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.27.1-1 [135 kB]
Get: 233 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 234 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 235 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB]
Get: 236 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-6 [157 kB]
Get: 237 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB]
Get: 238 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB]
Get: 239 http://deb.debian.org/debian unstable/main amd64 libnetcdf22 amd64 1:4.9.3-1 [517 kB]
Get: 240 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.3+b1 [794 kB]
Get: 241 http://deb.debian.org/debian unstable/main amd64 libnetcdf-dev amd64 1:4.9.3-1 [116 kB]
Get: 242 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3+b1 [16.6 kB]
Get: 243 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3+b1 [16.4 kB]
Get: 244 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB]
Get: 245 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB]
Get: 246 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-6 [49.3 kB]
Get: 247 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.2-2 [2155 kB]
Get: 248 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.2-2 [5009 kB]
Get: 249 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.13.2-2 [10.3 kB]
Get: 250 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.13.2-2 [1068 B]
Get: 251 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b2 [760 kB]
Get: 252 http://deb.debian.org/debian unstable/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-4+b1 [1869 kB]
Get: 253 http://deb.debian.org/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-4+b1 [218 kB]
Get: 254 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB]
Get: 255 http://deb.debian.org/debian unstable/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-4+b1 [682 kB]
Get: 256 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB]
Get: 257 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.1-1 [23.5 kB]
Get: 258 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB]
Get: 259 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [16.7 kB]
Get: 260 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.10-1 [18.4 kB]
Get: 261 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB]
Get: 262 http://deb.debian.org/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB]
Get: 263 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB]
Get: 264 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB]
Get: 265 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB]
Get: 266 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB]
Get: 267 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [16.2 kB]
Get: 268 http://deb.debian.org/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-4+b1 [3496 kB]
Get: 269 http://deb.debian.org/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-4+b1 [2396 kB]
Get: 270 http://deb.debian.org/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-4+b1 [126 kB]
Get: 271 http://deb.debian.org/debian unstable/main amd64 libqt5designer5 amd64 5.15.15-6 [2758 kB]
Get: 272 http://deb.debian.org/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-4+b1 [125 kB]
Get: 273 http://deb.debian.org/debian unstable/main amd64 libqt5help5 amd64 5.15.15-6 [151 kB]
Get: 274 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-4+b1 [151 kB]
Get: 275 http://deb.debian.org/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-4+b1 [206 kB]
Get: 276 http://deb.debian.org/debian unstable/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-4+b1 [151 kB]
Get: 277 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-6 [62.9 kB]
Get: 278 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB]
Get: 279 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-6 [114 kB]
Get: 280 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB]
Get: 281 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB]
Get: 282 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB]
Get: 283 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB]
Get: 284 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.13.2-2 [1044 B]
Get: 285 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.2-2 [506 kB]
Get: 286 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.13.2-2 [26.1 kB]
Get: 287 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.13.2-2 [1064 B]
Get: 288 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 289 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 290 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 291 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 292 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 293 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 294 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 295 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 296 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 297 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.8.0-1 [724 kB]
Get: 298 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B]
Get: 299 http://deb.debian.org/debian unstable/main amd64 python3-opengl all 3.1.9+dfsg-1 [622 kB]
Get: 300 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5.sip amd64 12.17.0-1+b1 [61.6 kB]
Get: 301 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5 amd64 5.15.11+dfsg-2 [2508 kB]
Get: 302 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5.qtopengl amd64 5.15.11+dfsg-2 [207 kB]
Get: 303 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get: 304 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.19 [29.4 kB]
Get: 305 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-6 [8446 kB]
Get: 306 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB]
Get: 307 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2024.20250309-1 [23.1 MB]
Get: 308 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2024.20250309-1 [1294 kB]
Fetched 214 MB in 4s (56.4 MB/s)
Preconfiguring packages ...
Selecting previously unselected package libpython3.13-minimal:amd64.
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Unpacking libpython3.13-minimal:amd64 (3.13.2-2) ...
Selecting previously unselected package libexpat1:amd64.
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Unpacking libexpat1:amd64 (2.7.0-1) ...
Selecting previously unselected package python3.13-minimal.
Preparing to unpack .../python3.13-minimal_3.13.2-2_amd64.deb ...
Unpacking python3.13-minimal (3.13.2-2) ...
Setting up libpython3.13-minimal:amd64 (3.13.2-2) ...
Setting up libexpat1:amd64 (2.7.0-1) ...
Setting up python3.13-minimal (3.13.2-2) ...
Selecting previously unselected package python3-minimal.
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Unpacking python3-minimal (3.13.2-2) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_13.0.0_all.deb ...
Unpacking media-types (13.0.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../2-netbase_6.5_all.deb ...
Unpacking netbase (6.5) ...
Selecting previously unselected package tzdata.
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Unpacking tzdata (2025a-2) ...
Selecting previously unselected package libffi8:amd64.
Preparing to unpack .../4-libffi8_3.4.7-1_amd64.deb ...
Unpacking libffi8:amd64 (3.4.7-1) ...
Selecting previously unselected package readline-common.
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Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:amd64.
Preparing to unpack .../6-libreadline8t64_8.2-6_amd64.deb ...
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-6) ...
Selecting previously unselected package libpython3.13-stdlib:amd64.
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Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) ...
Selecting previously unselected package python3.13.
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Unpacking python3.13 (3.13.2-2) ...
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Setting up python3-minimal (3.13.2-2) ...
Selecting previously unselected package python3.
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Preparing to unpack .../000-python3_3.13.2-2_amd64.deb ...
Unpacking python3 (3.13.2-2) ...
Selecting previously unselected package python3-numpy-dev:amd64.
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Selecting previously unselected package libblas3:amd64.
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Unpacking libblas3:amd64 (3.12.1-2) ...
Selecting previously unselected package libgfortran5:amd64.
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Unpacking libgfortran5:amd64 (14.2.0-19) ...
Selecting previously unselected package liblapack3:amd64.
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Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package libmagic-mgc.
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Unpacking libmagic-mgc (1:5.46-2) ...
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Unpacking libmagic1t64:amd64 (1:5.46-2) ...
Selecting previously unselected package file.
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Unpacking file (1:5.46-2) ...
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Moving old data out of the way
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Unpacking automake (1:1.17-3) ...
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Unpacking autopoint (0.23.1-1) ...
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Unpacking cmake-data (3.31.6-1) ...
Selecting previously unselected package libicu76:amd64.
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Unpacking libicu76:amd64 (76.1-3) ...
Selecting previously unselected package libxml2:amd64.
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Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.3+b1) ...
Selecting previously unselected package libarchive13t64:amd64.
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Selecting previously unselected package libbrotli1:amd64.
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Current default time zone: 'Etc/UTC'
Local time is now:      Tue Apr 21 01:24:12 UTC 2026.
Universal Time is now:  Tue Apr 21 01:24:12 UTC 2026.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

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 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/pymol-3.1.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../pymol_3.1.0+dfsg-1_source.changes
dpkg-buildpackage: info: source package pymol
dpkg-buildpackage: info: source version 3.1.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael Banck <mbanck@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean --buildsystem pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py clean 
running clean
removing '/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg'
rm -f -r build test/tmp test/cmp generated
dh_clean debian/pymol-ref-card.* \
         Rules.make create_shadertext.pyc
make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg'
 debian/rules binary
dh binary --buildsystem pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config 
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py build 
running build
running build_py
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
copying modules/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2
copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2
copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
copying modules/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf
copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf
copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments
copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast
copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ
copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ
copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ
copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ
copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples
copying modules/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples
copying modules/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup
copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins
copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo
copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal
copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal
copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal
copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry
copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt
copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt
copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax
running egg_info
creating modules/pymol.egg-info
writing modules/pymol.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/setuptools/_core_metadata.py:162: SetuptoolsDeprecationWarning: Invalid config.
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writing dependency_links to modules/pymol.egg-info/dependency_links.txt
writing entry points to modules/pymol.egg-info/entry_points.txt
writing requirements to modules/pymol.egg-info/requires.txt
writing top-level names to modules/pymol.egg-info/top_level.txt
writing manifest file 'modules/pymol.egg-info/SOURCES.txt'
reading manifest file 'modules/pymol.egg-info/SOURCES.txt'
adding license file 'LICENSE'
adding license file 'AUTHORS'
writing manifest file 'modules/pymol.egg-info/SOURCES.txt'
copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms
running build_ext
cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/P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-DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib64;/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-x86_64-linux-gnu.so
-- The C compiler identification is GNU 14.2.0
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[ 12%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o
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[ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o
[ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o
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[ 14%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o
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[ 16%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp
[ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp
[ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp
[ 18%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c
[ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function 'int getUniqueResID(char*, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable 'i' [-Wunused-variable]
  443 |   int i, uid;
      |       ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function 'int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable 'j' [-Wunused-variable]
  484 |   int i, count, atomdata, pos, idx, xyzcount, j;
      |                                               ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable 'oldChain' [-Wunused-variable]
  503 |   char oldChain[8];
      |        ^~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function 'bool readAngleBonds(molfile_atom_t*, pdbxParser*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable 'bondTable' [-Wunused-variable]
  803 |   int bondTable[32];
      |       ^~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable 'j' [-Wunused-variable]
  807 |   int i, pos, j, k;
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable 'modelNum' [-Wunused-variable]
  811 |   char modelNum[8];
      |        ^~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable 'atom' [-Wunused-variable]
  822 |   molfile_atom_t * atom;
      |                    ^~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable 'test' [-Wunused-variable]
  884 |   int test = parser->nbonds + bnum;
      |       ^~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function 'bool readRMSDBonds(molfile_atom_t*, pdbxParser*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable 'bondTable' [-Wunused-variable]
  984 |   int bondTable[32];
      |       ^~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable 'j' [-Wunused-variable]
  988 |   int i, pos, j, k;
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable 'modelNum' [-Wunused-variable]
  991 |   char modelNum[8];
      |        ^~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable 'atom' [-Wunused-variable]
 1002 |   molfile_atom_t * atom;
      |                    ^~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function 'void* open_file_write(const char*, const char*, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable 'fd' [-Wunused-variable]
 1409 |   FILE* fd;
      |         ^~
[ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o
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[ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o
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[ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp
[ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o
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[ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o
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[ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o
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[ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o
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[ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o
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[ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o
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[ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o
[ 23%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c
[ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void put_element_ply(PlyFile*, void*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable 'i' [-Wunused-variable]
  459 |   int i,j,k;
      |       ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void ascii_get_element(PlyFile*, char*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable 'i' [-Wunused-variable]
 1407 |   int i,j,k;
      |       ^
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void binary_get_element(PlyFile*, char*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable 'i' [-Wunused-variable]
 1541 |   int i,j,k;
      |       ^
[ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c
[ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c
[ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c
[ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c
[ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c
[ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o
/usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c
[ 27%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o
[ 27%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o
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[ 29%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o
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[ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Block.cpp.o
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[ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o
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[ 30%] Building CXX object CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o
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[ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o
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[ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/Field.cpp.o
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[ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/File.cpp.o
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[ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GenericBuffer.cpp
[ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o
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/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GraphicsUtil.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function 'vtf_read_bonds':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: '%s' directive argument is null [-Wformat-overflow=]
  147 |   sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n",
      |                                                ^~
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/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'char* recreate_command_line(int, char**)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
 1334 |   line[0] = '\0';
      |   ~~~~~~~~^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by 'malloc'
 1333 |   line = (char *) malloc (sizeof(char) * len);
      |                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~
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/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -MF CMakeFiles/_cmd.dir/layer0/TTT.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/TTT.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function 'int {anonymous}::write_structure(void*, int, const molfile_atom_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable 'last_ctnumber' [-Wunused-variable]
 1904 |     int last_ctnumber = -1;
      |         ^~~~~~~~~~~~~
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/build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp: In function 'size_t pymol::memory_usage()':
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=]
   38 |     std::fscanf(fp, "%*zu%zu", &vmRSS);
      |                     ^~~~~~~~~
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[ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o
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[ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o
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[ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o
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[ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o
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[ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o
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[ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/Seq.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Seq.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Seq.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'void DDmkdir(const std::string&, mode_t, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
  714 |         sprintf(sub, "%03x/", i);
      |                       ^~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646]
  714 |         sprintf(sub, "%03x/", i);
      |                      ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: note: 'sprintf' output between 5 and 10 bytes into a destination of size 6
  714 |         sprintf(sub, "%03x/", i);
      |         ~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
  722 |             sprintf(subsub, "%03x", j);
      |                              ^~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646]
  722 |             sprintf(subsub, "%03x", j);
      |                             ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:20: note: 'sprintf' output between 4 and 9 bytes into a destination of size 6
  722 |             sprintf(subsub, "%03x", j);
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Setting.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Setting.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp: In function 'bool TextureIsCharTextured(PyMOLGlobals*, int, float*)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp:130:9: warning: unused variable 'use_shader' [-Wunused-variable]
  130 |   short use_shader = (short) SettingGetGlobal_b(G, cSetting_use_shaders);
      |         ^~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'std::string framefile(const std::string&, size_t, size_t, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
  675 |             sprintf(answer, "%03x/", d1);
      |                                   ^
In function 'std::string DDreldir(const std::string&, int, int)',
    inlined from 'std::string framefile(const std::string&, size_t, size_t, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:20: note: 'sprintf' output between 5 and 10 bytes into a destination of size 9
  675 |             sprintf(answer, "%03x/", d1);
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'std::string framefile(const std::string&, size_t, size_t, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: '%03x' directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=]
  673 |             sprintf(answer, "%03x/%03x/", d1, d2);
      |                                   ^~~~
In function 'std::string DDreldir(const std::string&, int, int)',
    inlined from 'std::string framefile(const std::string&, size_t, size_t, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646]
  673 |             sprintf(answer, "%03x/%03x/", d1, d2);
      |                             ^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:20: note: 'sprintf' output between 9 and 19 bytes into a destination of size 9
  673 |             sprintf(answer, "%03x/%03x/", d1, d2);
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Shaker.cpp
[ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp
[ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpPConv.cpp
[ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpTools.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp: In member function 'std::string pymol::SymOp::to_string() const':
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:32: warning: '%d' directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=]
   37 |   std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5);
      |                                ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132]
   37 |   std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5);
      |                          ^~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132]
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:16: note: 'snprintf' output between 6 and 17 bytes into a destination of size 8
   37 |   std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5);
      |   ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Symmetry.cpp
[ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Text.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Text.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Text.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Text.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Text.cpp
[ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -MF CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/TypeFace.cpp
[ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o
[ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/View.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Wizard.cpp
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/View.cpp.o -MF CMakeFiles/_cmd.dir/layer1/View.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/View.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/View.cpp
[ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AssemblyHelpers.cpp
[ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfo.cpp
[ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfoHistory.cpp
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt.h:45,
                 from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:39:
In member function 'void TNT::Array1D<T>::set_(T*, T*, const T&) [with T = double]',
    inlined from 'TNT::Array1D<T>::Array1D(int, const T&) [with T = double]' at /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:119:6,
    inlined from 'PyObject* findBest(pcePoint, pcePoint, pathCache, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:506:28:
/build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:283:20: warning: 'void* __builtin_memset(void*, int, long unsigned int)' specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
  283 |                 *p = a;
      |                 ~~~^~~
[ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/BondTypeHistory.cpp
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71:
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 4 into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 4 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 4 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 4 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 8 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 8 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [12, 16] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 12 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [12, 16] into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 12 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 16 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 16 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [20, 24] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 20 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [20, 24] into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 20 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object 'nx' of size 4
 1494 |   int32_t nx, ny, nz;
      |           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 24 into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object 'nx' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset 24 into destination object 'nx' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 4 into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 4 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 4 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 4 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 8 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 8 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [12, 16] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 12 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [12, 16] into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 12 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 16 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 16 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [20, 24] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 20 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [20, 24] into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 20 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object 'ny' of size 4
 1494 |   int32_t nx, ny, nz;
      |               ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 24 into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object 'ny' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset 24 into destination object 'ny' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:58:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=]
   58 |     dataptr[2] = tmp;
      |     ~~~~~~~~~~~^~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 4 into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 4 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 4 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 4 into destination object 'nz' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 8 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 8 into destination object 'nz' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [12, 16] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 12 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [12, 16] into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 12 into destination object 'nz' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 16 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 16 into destination object 'nz' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [20, 24] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 20 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [20, 24] into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 20 into destination object 'nz' of size 4
In function 'void swap4_unaligned(void*, long int)',
    inlined from 'void {anonymous}::Blob::get_float(float*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36,
    inlined from 'void {anonymous}::Blob::get_int32(int32_t*) const' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10,
    inlined from 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)' at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24:
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=]
   54 |     dataptr[0] = dataptr[3];
      |     ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)':
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object 'nz' of size 4
 1494 |   int32_t nx, ny, nz;
      |                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 24 into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object 'nz' of size 4
/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset 24 into destination object 'nz' of size 4
[ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o
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/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/DistSet.cpp
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[ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o
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[ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmodTyping.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp: In function 'int ObjectMotion(pymol::CObject*, MViewAction, int, int, float, float, int, float, int, int, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:193:15: warning: ignoring return value of 'constexpr const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = int]', declared with attribute 'nodiscard' [-Wunused-result]
  193 |       std::max(0, first);
      |       ~~~~~~~~^~~~~~~~~~
In file included from /usr/include/c++/14/bits/stl_uninitialized.h:63,
                 from /usr/include/c++/14/memory:69,
                 from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_python.h:23,
                 from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:17:
/usr/include/c++/14/bits/stl_algobase.h:257:5: note: declared here
  257 |     max(const _Tp& __a, const _Tp& __b)
      |     ^~~
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[ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o
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[ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectAlignment.cpp
[ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCGO.cpp
[ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCallback.cpp
[ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCurve.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp: In function 'void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:455:32: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=]
  455 |           " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G);
      |                                ^~                      ~~~~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:19:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output 21 or more bytes (assuming 276) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:454:11: note: in expansion of macro 'PRINTFB'
  454 |           PRINTFB(G, FB_Scene, FB_Results)
      |           ^~~~~~~
[ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o
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[ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o
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[ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o
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/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphere.cpp
[ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereGenerate.cpp
[ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereImmediate.cpp
[ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o
[ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepWireBond.cpp
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSurface.cpp
[ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Sculpt.cpp
[ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SculptCache.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In member function 'virtual void ObjectMesh::update()':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:508:39: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=]
  508 |         "ObjectMeshUpdate-Error: map '%s' has been deleted.\n",
      |                                       ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 50 and 305 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:507:9: note: in expansion of macro 'PRINTFB'
  507 |         PRINTFB(I->G, FB_ObjectMesh, FB_Errors)
      |         ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:541:38: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=]
  541 |             " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G);
      |                                      ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 27 and 282 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:540:13: note: in expansion of macro 'PRINTFB'
  540 |             PRINTFB(G, FB_ObjectMesh, FB_Details)
      |             ^~~~~~~
[ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SideChainHelper.cpp
[ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/VFont.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -MF CMakeFiles/_cmd.dir/layer2/VFont.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/VFont.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In function 'void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:269:30: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
  269 |         " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G);
      |                              ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:45:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output 34 or more bytes (assuming 289) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:268:7: note: in expansion of macro 'PRINTFB'
  268 |       PRINTFB(I->G, FB_ObjectSurface, FB_Actions)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp: In function 'ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:80:33: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
   80 |       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
      |                                 ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:47:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 46 and 301 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:79:5: note: in expansion of macro 'PRINTFB'
   79 |     PRINTFB(G, FB_ObjectVolume, FB_Errors)
      |     ^~~~~~~
[ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -MF CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/AtomIterators.cpp
[ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/CifDataValueFormatter.cpp
[ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Editor.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Editor.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp
[ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Executive.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Executive.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp
[ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -MF CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/ExecutivePython.cpp
[ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Interactions.cpp
[ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MaeExportHelpers.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In function 'void ObjectMeshDump(ObjectMesh*, const char*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:333:25: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
  333 |       " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G);
      |                         ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output 31 or more bytes (assuming 286) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:332:7: note: in expansion of macro 'PRINTFB'
  332 |       PRINTFB(I->G, FB_ObjectMesh, FB_Actions)
      |       ^~~~~~~
[ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o
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[ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MovieScene.cpp
[ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -MF CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp: In member function 'virtual void ObjectSlice::update()':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:639:42: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=]
  639 |           "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName
      |                                          ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:44:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 51 and 306 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:638:9: note: in expansion of macro 'PRINTFB'
  638 |         PRINTFB(I->G, FB_ObjectSlice, FB_Errors)
      |         ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:650:39: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=]
  650 |             " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G);
      |                                       ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 28 and 283 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:649:11: note: in expansion of macro 'PRINTFB'
  649 |           PRINTFB(I->G, FB_ObjectSlice, FB_Blather)
      |           ^~~~~~~
[ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -MF CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/RingFinder.cpp
[ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Seeker.cpp
[ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/Selector.cpp.o
[ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Selector.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SelectorTmp.cpp
[ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o
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[ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRecSpecial.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In member function 'virtual void ObjectSurface::update()':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:494:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
  494 |               " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G);
      |                                           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 30 and 285 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:493:13: note: in expansion of macro 'PRINTFB'
  493 |             PRINTFB(I->G, FB_ObjectSurface, FB_Details)
      |             ^~~~~~~
[ 93%] Building CXX object CMakeFiles/_cmd.dir/layer4/Menu.cpp.o
[ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o
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/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp
[ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -MF CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/PopUp.cpp
[ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o
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[ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o
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[ 96%] Building CXX object CMakeFiles/_cmd.dir/layer5/main.cpp.o
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[ 96%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVContext.cpp
[ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o
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[ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVLexicon.cpp
[ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o
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[ 98%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o
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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function 'CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7597:37: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=]
 7597 |     " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G)
      |                                     ^~      ~~~~~~~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:49:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 34 and 289 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7596:3: note: in expansion of macro 'PRINTFB'
 7596 |   PRINTFB(G, FB_ObjectMolecule, FB_Blather)
      |   ^~~~~~~
[ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVRandom.cpp
[ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/ov_utility.cpp
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp: In function 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:335:27: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
  335 |         " ObjMol: created %s/%s/%s/%s`%d%c/%s\n",
      |                           ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:36:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 26 and 291 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:334:7: note: in expansion of macro 'PRINTFB'
  334 |       PRINTFB(G, FB_ObjectMolecule, FB_Actions)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'void ObjectMapDump(const ObjectMap*, const char*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5984:24: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=]
 5984 |       " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G);
      |                        ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:48:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output 30 or more bytes (assuming 285) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5983:5: note: in expansion of macro 'PRINTFB'
 5983 |     PRINTFB(om->G, FB_ObjectMap, FB_Actions)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp: In function 'pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:941:65: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=]
  941 |         " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G);
      |                                                                 ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 58 and 313 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:940:7: note: in expansion of macro 'PRINTFB'
  940 |       PRINTFB(G, FB_ObjectMolecule, FB_Errors)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function 'void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1935:29: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=]
 1935 |         " Editor: grabbing (%s).", name ENDFB(G);
      |                             ^~     ~~~~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:42:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 22 and 277 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1934:7: note: in expansion of macro 'PRINTFB'
 1934 |       PRINTFB(G, FB_Editor, FB_Blather)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function 'void EditorDefineExtraPks(PyMOLGlobals*)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:29: warning: '%s' directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=]
  337 |     sprintf(buffer, "(byres %s)", name);
      |                             ^~    ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:12: note: 'sprintf' output between 9 and 264 bytes into a destination of size 256
  337 |     sprintf(buffer, "(byres %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:31: warning: '%s' directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=]
  339 |     sprintf(buffer, "(bychain %s)", name);
      |                               ^~    ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:12: note: 'sprintf' output between 11 and 266 bytes into a destination of size 256
  339 |     sprintf(buffer, "(bychain %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:32: warning: '%s' directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=]
  341 |     sprintf(buffer, "(byobject %s)", name);
      |                                ^~    ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:12: note: 'sprintf' output between 12 and 267 bytes into a destination of size 256
  341 |     sprintf(buffer, "(byobject %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In member function 'virtual void ObjectMolecule::update()':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10623:82: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=]
10623 |               " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n",
      |                                                                                  ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 68 and 333 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10622:13: note: in expansion of macro 'PRINTFB'
10622 |             PRINTFB(G, FB_ObjectMolecule, FB_Blather)
      |             ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function 'int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, const float*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:43: warning: '%s' directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=]
10749 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |                                           ^~
10750 |               buffer, v[0], v[1], v[2], state + 1, mode, 0);
      |               ~~~~~~                       
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:21: note: directive argument in the range [-2147483647, 2147483647]
10749 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:14: note: 'sprintf' output between 78 and 2036 bytes into a destination of size 1024
10749 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
10750 |               buffer, v[0], v[1], v[2], state + 1, mode, 0);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2962:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2962 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function 'int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)',
    inlined from 'ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25,
    inlined from 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 16 and 1039 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2961:5: note: in expansion of macro 'PRINTFB'
 2961 |     PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2971:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2971 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function 'int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)',
    inlined from 'ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25,
    inlined from 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 16 and 1039 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2970:5: note: in expansion of macro 'PRINTFB'
 2970 |     PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2977:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2977 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function 'int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)',
    inlined from 'ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25,
    inlined from 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 16 and 1039 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2976:5: note: in expansion of macro 'PRINTFB'
 2976 |     PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3059:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 3059 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function 'int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)',
    inlined from 'ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25,
    inlined from 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 16 and 1039 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3058:5: note: in expansion of macro 'PRINTFB'
 3058 |     PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function 'int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
 4291 |     " ObjectMap: %s\n", cc ENDFB(I->G);
      |                  ^~     ~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 14 and 1037 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro 'PRINTFB'
 4290 |   PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |   ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
 4291 |     " ObjectMap: %s\n", cc ENDFB(I->G);
      |                  ^~     ~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 14 and 1037 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro 'PRINTFB'
 4290 |   PRINTFB(I->G, FB_ObjectMap, FB_Details)
      |   ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9120:58: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=]
 9120 |                 " Remove: eliminated %d atoms in model \"%s\".\n",
      |                                                          ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:94:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 42 and 307 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9119:15: note: in expansion of macro 'PRINTFB'
 9119 |               PRINTFB(G, FB_Editor, FB_Actions)
      |               ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:28: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11551 |                 " Setting: %s set for %d bonds in object \"%s\".\n",
      |                            ^~
11552 |                 name, nSet, obj->Name ENDF(G);
      |                 ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:17: note: directive argument in the range [1, 2147483647]
11551 |                 " Setting: %s set for %d bonds in object \"%s\".\n",
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 42 and 560 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11550:15: note: in expansion of macro 'PRINTF'
11550 |               PRINTF
      |               ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:26: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11632 |               " Getting: %s for %d bonds in object \"%s\".\n",
      |                          ^~
11633 |               name, nSet, obj->Name ENDF(G);
      |               ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:15: note: directive argument in the range [1, 2147483647]
11632 |               " Getting: %s for %d bonds in object \"%s\".\n",
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 38 and 556 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11631:13: note: in expansion of macro 'PRINTF'
11631 |             PRINTF
      |             ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11732:62: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=]
11732 |                   " Setting: %s set for %d bonds in object \"%s\".\n",
      |                                                              ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 42 or more bytes (assuming 306) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11731:17: note: in expansion of macro 'PRINTF'
11731 |                 PRINTF
      |                 ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:26: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11811 |               " Setting: %s unset for %d bonds in object \"%s\".\n",
      |                          ^~
11812 |               name, nSet, rec->obj->Name ENDF(G);
      |               ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:15: note: directive argument in the range [1, 2147483647]
11811 |               " Setting: %s unset for %d bonds in object \"%s\".\n",
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 44 and 562 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11810:13: note: in expansion of macro 'PRINTF'
11810 |             PRINTF
      |             ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:30: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12353 |                   " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                              ^~
12354 |                   name, value2, obj->Name, state + 1 ENDF(G);
      |                   ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:19: note: directive argument in the range [1, 2147483647]
12353 |                   " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 43 and 1584 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12352:17: note: in expansion of macro 'PRINTF'
12352 |                 PRINTF
      |                 ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12345:30: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12345 |                   " Setting: %s set to %s in object \"%s\".\n",
      |                              ^~
12346 |                   name, value2, obj->Name ENDF(G);
      |                   ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 34 and 1566 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12344:17: note: in expansion of macro 'PRINTF'
12344 |                 PRINTF
      |                 ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:29: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12324 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |                             ^~                ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 21 and 1298 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:11: note: in expansion of macro 'PRINTF'
12324 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |           ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp: In function 'int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1717:70: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=]
 1717 |                     " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n",
      |                                                                      ^~
In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:37:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 59 and 324 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1716:19: note: in expansion of macro 'PRINTFB'
 1716 |                   PRINTFB(G, FB_Selector, FB_Warnings)
      |                   ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12256:36: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12256 |                         " Setting: %s set for %d atoms in object \"%s\".\n",
      |                                    ^~
12257 |                         name, op.i4, rec->obj->Name ENDF(G);
      |                         ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 42 and 561 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12255:23: note: in expansion of macro 'PRINTF'
12255 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:32: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12224 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                                ^~
12225 |                     name, value2, nObj, state + 1 ENDF(G);
      |                     ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647]
12224 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647]
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 43 and 1338 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12223:19: note: in expansion of macro 'PRINTF'
12223 |                   PRINTF
      |                   ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:32: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12221 |                     " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G);
      |                                ^~                              ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:21: note: directive argument in the range [1, 2147483647]
12221 |                     " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 34 and 1320 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12220:19: note: in expansion of macro 'PRINTF'
12220 |                   PRINTF
      |                   ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:36: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12288 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                                    ^~
12289 |                         name, value2, rec->obj->Name, state + 1 ENDF(G);
      |                         ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:25: note: directive argument in the range [1, 2147483647]
12288 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 43 and 1584 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12287:23: note: in expansion of macro 'PRINTF'
12287 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12280:36: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12280 |                         " Setting: %s set to %s in object \"%s\".\n",
      |                                    ^~
12281 |                         name, value2, rec->obj->Name ENDF(G);
      |                         ~~~~        
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 34 and 1566 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12279:23: note: in expansion of macro 'PRINTF'
12279 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:29: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12184 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |                             ^~                ~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output between 21 and 1298 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:11: note: in expansion of macro 'PRINTF'
12184 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |           ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=]
 5973 |       " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__,
      |                                              ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 84 and 339 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro 'PRINTFB'
 5972 |       PRINTFB(G, FB_Executive, FB_Warnings)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5982:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=]
 5982 |       " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G);
      |                                           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 56 and 311 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5981:7: note: in expansion of macro 'PRINTFB'
 5981 |       PRINTFB(G, FB_Executive, FB_Details)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=]
 5973 |       " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__,
      |                                              ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 84 and 339 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro 'PRINTFB'
 5972 |       PRINTFB(G, FB_Executive, FB_Warnings)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9484:67: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=]
 9484 |                   " Valence: %d bond valences adjusted in model \"%s\".\n", cnt,
      |                                                                   ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 49 and 314 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9483:17: note: in expansion of macro 'PRINTFB'
 9483 |                 PRINTFB(G, FB_Editor, FB_Actions)
      |                 ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9496:59: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=]
 9496 |                   " Unbond: %d bonds removed from model \"%s\".\n",
      |                                                           ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 41 and 306 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9495:17: note: in expansion of macro 'PRINTFB'
 9495 |                 PRINTFB(G, FB_Editor, FB_Actions)
      |                 ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9471:53: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=]
 9471 |                   " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name
      |                                                     ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 35 and 300 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9470:17: note: in expansion of macro 'PRINTFB'
 9470 |                 PRINTFB(G, FB_Editor, FB_Actions)
      |                 ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12465:68: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=]
12465 |                       " Setting: %s unset for %d atoms in object \"%s\".\n",
      |                                                                    ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 44 or more bytes (assuming 299) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12464:21: note: in expansion of macro 'PRINTF'
12464 |                     PRINTF
      |                     ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:57: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
12487 |                         " Setting: %s unset in object \"%s\", state %d.\n",
      |                                                         ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:25: note: directive argument in the range [1, 2147483647]
12487 |                         " Setting: %s unset in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 41 or more bytes (assuming 305) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12486:23: note: in expansion of macro 'PRINTF'
12486 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12481:57: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
12481 |                         " Setting: %s unset in object \"%s\".\n",
      |                                                         ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 32 or more bytes (assuming 287) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12480:23: note: in expansion of macro 'PRINTF'
12480 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In member function 'virtual int CExecutive::drag(int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:55: warning: '%s' directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=]
15625 |                   sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n",
      |                                                       ^~
15626 |                           order_input, (location == -2) ? "upper" : "current");
      |                           ~~~~~~~~~~~                  
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:26: note: 'sprintf' output between 32 and 1057 bytes into a destination of size 1024
15625 |                   sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n",
      |                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
15626 |                           order_input, (location == -2) ? "upper" : "current");
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12004:70: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=]
12004 |                           " Setting: %s set for %d atoms in object \"%s\".\n",
      |                                                                      ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 42 or more bytes (assuming 297) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12003:25: note: in expansion of macro 'PRINTF'
12003 |                         PRINTF
      |                         ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:42: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11915 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                                          ^~
11916 |                     name, value, nObj, state + 1 ENDF(G);
      |                           ~~~~~           
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647]
11915 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647]
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 43 or more bytes (assuming 1084) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11914:19: note: in expansion of macro 'PRINTF'
11914 |                   PRINTF
      |                   ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:42: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11912 |                     " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G);
      |                                          ^~                          ~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:21: note: directive argument in the range [1, 2147483647]
11912 |                     " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 34 or more bytes (assuming 1066) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11911:19: note: in expansion of macro 'PRINTF'
11911 |                   PRINTF
      |                   ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:46: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
12036 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                                              ^~
12037 |                         name, value, rec->obj->Name, state + 1 ENDF(G);
      |                               ~~~~~           
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:25: note: directive argument in the range [1, 2147483647]
12036 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 43 or more bytes (assuming 1330) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12035:23: note: in expansion of macro 'PRINTF'
12035 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12029:46: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
12029 |                         " Setting: %s set to %s in object \"%s\".\n",
      |                                              ^~
12030 |                         name, value, rec->obj->Name ENDF(G);
      |                               ~~~~~           
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 34 or more bytes (assuming 1312) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12028:23: note: in expansion of macro 'PRINTF'
12028 |                       PRINTF
      |                       ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11871 |           PRINTF " Setting: %s set to %s.\n", name, value ENDF(G);
      |                                       ^~            ~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: 'snprintf' output 21 or more bytes (assuming 1044) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:11: note: in expansion of macro 'PRINTF'
11871 |           PRINTF " Setting: %s set to %s.\n", name, value ENDF(G);
      |           ^~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'void ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14601:37: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
14601 |         " Executive-Warning: name \"%s\" collides with a selection language keyword.\n",
      |                                     ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 73 and 328 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14600:7: note: in expansion of macro 'PRINTFB'
14600 |       PRINTFB(G, FB_Executive, FB_Warnings)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14596:36: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
14596 |         " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name
      |                                    ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 61 and 316 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14595:7: note: in expansion of macro 'PRINTFB'
14595 |       PRINTFB(G, FB_Executive, FB_Warnings)
      |       ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14627:11: warning: 'char* strcpy(char*, const char*)' writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
14627 |     strcpy(rec->name, obj->Name);
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
cc1plus: note: destination object is likely at address zero
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2275:40: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
 2275 |                   " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name
      |                                        ^~
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 36 and 546 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2274:17: note: in expansion of macro 'PRINTFB'
 2274 |                 PRINTFB(G, FB_Executive, FB_Actions)
      |                 ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'pymol::Result<std::vector<DiscardedRec> > ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3535:41: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=]
 3535 |       " Warning: Invalid characters in '%s' have been replaced or stripped\n",
      |                                         ^~
 3536 |       name ENDFB(G);
      |       ~~~~                               
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 67 and 322 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3534:5: note: in expansion of macro 'PRINTFB'
 3534 |     PRINTFB(G, FB_Executive, FB_Warnings)
      |     ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5097:57: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=]
 5097 |             " Executive: skipping unrecognized object \"%s\" of type %d.\n",
      |                                                         ^~
In function 'int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)',
    inlined from 'int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 56 and 321 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5096:11: note: in expansion of macro 'PRINTFB'
 5096 |           PRINTFB(G, FB_Executive, FB_Errors)
      |           ^~~~~~~
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function 'int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)':
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5122:58: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=]
 5122 |           "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G);
      |                                                          ^~
In function 'int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)',
    inlined from 'int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)' at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38:
/build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: 'snprintf' output between 49 and 304 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
/build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5121:9: note: in expansion of macro 'PRINTFB'
 5121 |         PRINTFB(G, FB_Executive, FB_Errors)
      |         ^~~~~~~
[100%] Linking CXX shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-x86_64-linux-gnu.so
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echo "FIXME: Test ends up with: AttributeError: module 'pymol' has no attribute 'start_pymol'"
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!!

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        Instead, use pypa/build, pypa/installer or other
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        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
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running build_ext
cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib64;/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-x86_64-linux-gnu.so
-- Configuring done (0.0s)
-- Generating done (0.1s)
-- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-x86_64-cpython-313/_cmd
cmake --build . --config Release -j42
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gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-x86_64-cpython-313/_cmd'
[  1%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o
/usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp
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copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/xyz.py to xyz.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/dictdb.py to dictdb.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmd.py to mmd.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/arc.py to arc.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_amber.py to bond_amber.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gms.py to gms.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_amber.py to water_amber.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/solvate.py to solvate.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_residues.py to protein_residues.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/io.py to io.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gamess1.py to gamess1.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/io.py to io.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/models.py to models.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bonds.py to bonds.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/brick.py to brick.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol2.py to mol2.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein.py to protein.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mass.py to mass.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/state.py to state.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/keyword.py to keyword.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/realtime.py to realtime.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/amber.py to amber.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cc1.py to cc1.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pdb.py to pdb.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/neighbor.py to neighbor.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/hetatm.py to hetatm.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol.py to mol.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cif.py to cif.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/charge.py to charge.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_residues.py to water_residues.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/map.py to map.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pkl.py to pkl.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/assign.py to assign.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/amber99.py to amber99.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber.py to protein_amber.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cpv.py to cpv.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/sdf.py to sdf.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/place.py to place.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mae.py to mae.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/lst.py to lst.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/util.py to util.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/state.py to state.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/realtime.py to realtime.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/commands.py to commands.cpython-313.pyc
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byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/fitting.py to fitting.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/api.py to api.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/helping.py to helping.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/__main__.py to __main__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/setting.py to setting.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/editor.py to editor.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/builder.py to builder.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/scene_bin_gui.py to scene_bin_gui.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/volume.py to volume.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/python.py to python.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-313.pyc
byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-313.pyc
running install_egg_info
Copying modules/pymol.egg-info to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol-3.1.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing pymol script to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/bin
   debian/rules override_dh_install-arch
make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg'
dh_numpy3
Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57.
dh_install
rm -rf debian/python*pymol/usr/bin
make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg'
   debian/rules override_dh_install-indep
make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg'
pdflatex -output-directory debian -jobname pymol-ref-card debian/pymolRef.tex
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./debian/pymolRef.tex
LaTeX2e <2024-11-01> patch level 2
L3 programming layer <2025-01-18>
(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2024/06/29 v1.4n Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty)
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
No file pymol-ref-card.aux.

Underfull \hbox (badness 10000) in paragraph at lines 78--79

[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]
[2] (debian/pymol-ref-card.aux)
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm0900
mkdir: cannot create directory '././nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm0900
This is METAFONT, Version 2.71828182 (TeX Live 2025/dev/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm0900.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
(some charht values had to be adjusted by as much as 0.06744pt)
Font metrics written on tcrm0900.tfm.
Output written on tcrm0900.600gf (128 characters, 21392 bytes).
Transcript written on tcrm0900.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcrm0900.600pk: successfully generated.
 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tcrm0900.600pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmitt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cm
mi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on debian/pymol-ref-card.pdf (2 pages, 108224 bytes).
Transcript written on debian/pymol-ref-card.log.
dh_install
install -m 755 debian/pymol.launch debian/pymol/usr/bin/pymol
make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg'
   dh_installdocs -O--buildsystem=pybuild
   dh_installchangelogs -O--buildsystem=pybuild
   dh_installexamples -O--buildsystem=pybuild
   dh_installman -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
   dh_installsystemduser -O--buildsystem=pybuild
   dh_installmime -O--buildsystem=pybuild
   dh_lintian -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   debian/rules override_dh_compress
make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg'
dh_compress -Xpdb
make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg'
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
dwz: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-313-x86_64-linux-gnu.so: DWARF compression not beneficial - old size 35272916 new size 35419302
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Size: it's probably a plugin
dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-313-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_SetItem: it's probably a plugin
dpkg-shlibdeps: warning: 102 other similar warnings have been skipped (use -v to see them all)
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
dpkg-gencontrol: warning: Depends field of package pymol: substitution variable ${python3:Depends} used, but is not defined
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'pymol' in '../pymol_3.1.0+dfsg-1_all.deb'.
dpkg-deb: building package 'python3-pymol-dbgsym' in '../python3-pymol-dbgsym_3.1.0+dfsg-1_amd64.deb'.
dpkg-deb: building package 'python3-pymol' in '../python3-pymol_3.1.0+dfsg-1_amd64.deb'.
dpkg-deb: building package 'pymol-data' in '../pymol-data_3.1.0+dfsg-1_all.deb'.
 dpkg-genbuildinfo --build=binary -O../pymol_3.1.0+dfsg-1_amd64.buildinfo
 dpkg-genchanges --build=binary -O../pymol_3.1.0+dfsg-1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/3146162 and its subdirectories
I: Current time: Mon Apr 20 13:29:31 -12 2026
I: pbuilder-time-stamp: 1776734971
Tue Mar 18 19:06:33 UTC 2025  I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net.
Tue Mar 18 19:06:33 UTC 2025  I: Preparing to do remote build '2' on ionos1-amd64.debian.net.
Tue Mar 18 19:19:08 UTC 2025  I: Deleting $TMPDIR on ionos1-amd64.debian.net.
Tue Mar 18 19:19:08 UTC 2025  I: pymol_3.1.0+dfsg-1_amd64.changes:
Format: 1.8
Date: Mon, 17 Mar 2025 09:37:33 +0100
Source: pymol
Binary: pymol pymol-data python3-pymol python3-pymol-dbgsym
Architecture: all amd64
Version: 3.1.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck@debian.org>
Description:
 pymol      - Molecular Graphics System
 pymol-data - data files for PyMOL
 python3-pymol - Molecular Graphics System (Python 3 modules)
Changes:
 pymol (3.1.0+dfsg-1) unstable; urgency=medium
 .
   * New upstream release.
   * debian/patches/27_fix_pymol_path_in_setup.patch: Refreshed.
   * debian/patches/28_no_data_install_in_python_path.patch: Likewise.
   * debian/patches/32_fix_spelling_lintian_warnings.patch: Likewise.
   * debian/control (Build-Depends): Added cmake.
   * debian/rules: Force PYBUILD_SYSTEM to distutils in order to avoid pybuild
     directly calling cmake.
Checksums-Sha1:
 c4d0712316734f493b8f3ee6f92a0d69d1d07cd6 1430060 pymol-data_3.1.0+dfsg-1_all.deb
 768e4f13c51712b160e49dbb3642f6201aba96f6 180696 pymol_3.1.0+dfsg-1_all.deb
 e65e30732f3946cbc4e464223dbdf15a4d50b427 14299 pymol_3.1.0+dfsg-1_amd64.buildinfo
 49bc85448eaf192c564b8cd21bd349b504aba6c9 22167140 python3-pymol-dbgsym_3.1.0+dfsg-1_amd64.deb
 d540a92c89d2083ca91ccacf3a3a975e1ff4ff7c 3908588 python3-pymol_3.1.0+dfsg-1_amd64.deb
Checksums-Sha256:
 9705b7ece59206b35bcb053174c36abb24c7240e552e2a6db799c55cfd91e4d2 1430060 pymol-data_3.1.0+dfsg-1_all.deb
 5efd739bd851e543b2b02f28a6ac890c415e43c6cff3633f3cdf4ea0c45e0a45 180696 pymol_3.1.0+dfsg-1_all.deb
 c5d33dc8704d837416ac2d7db2a5c713008d1cc1d5e75b209c586c5ef42f62cb 14299 pymol_3.1.0+dfsg-1_amd64.buildinfo
 5faffdec3d413dad75be3078c7c149fa48776494ad2199af24b14751693bae0d 22167140 python3-pymol-dbgsym_3.1.0+dfsg-1_amd64.deb
 16bbb38d8c4ab89921745c237e740e5b80d0f6c602039e3937fbcf56e6a34791 3908588 python3-pymol_3.1.0+dfsg-1_amd64.deb
Files:
 4b036b74296303ec34c5c550ec9602ed 1430060 science optional pymol-data_3.1.0+dfsg-1_all.deb
 da44be2aa80703c27eeacf8f124b575b 180696 science optional pymol_3.1.0+dfsg-1_all.deb
 190d29b85280d31dd9989f7269ed3c64 14299 science optional pymol_3.1.0+dfsg-1_amd64.buildinfo
 fdc8d6bc6ac44bc7995ca42c27607762 22167140 debug optional python3-pymol-dbgsym_3.1.0+dfsg-1_amd64.deb
 e25c6d2330d2925e30ea4abdf1da1600 3908588 python optional python3-pymol_3.1.0+dfsg-1_amd64.deb
Tue Mar 18 19:19:10 UTC 2025  I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-amd64_18-33316.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/pymol_3.1.0+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/pymol_3.1.0+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/pymol_3.1.0+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/b1/pymol_3.1.0+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.YIBzfrI2/b2/pymol_3.1.0+dfsg-1_amd64.changes

## close_archive (total time: 0.000s)
       0.000s     22 calls    diffoscope.comparators.xz.XzContainer
       0.000s     10 calls    diffoscope.comparators.deb.DebContainer
       0.000s     16 calls    diffoscope.comparators.tar.TarContainer
       0.000s      6 calls    diffoscope.comparators.deb.DebTarContainer

## command (total time: 820.215s)
     425.343s   1003 calls    readelf
     325.087s    121 calls    diff
      63.530s    209 calls    objdump
       2.866s      2 calls    objcopy
       1.832s     22 calls    xz
       1.535s     22 calls    strings
       0.010s      3 calls    cmp
       0.010s      3 calls    cmp (external)
       0.002s     24 calls    cmp (internal)

## compare_files (cumulative) (total time: 3146.947s)
     588.765s      1 call     abc.DotChangesFile
     588.698s      2 calls    abc.DebFile
     588.528s      4 calls    abc.XzFile
     587.277s      2 calls    abc.DebDataTarFile
     585.137s      2 calls    abc.ElfFile
     198.689s     10 calls    diffoscope.comparators.elf.ElfCodeSection
       8.182s     33 calls    diffoscope.comparators.elf.ElfSection
       1.560s      3 calls    diffoscope.comparators.elf.ElfStringSection
       0.073s      2 calls    abc.TarFile
       0.016s      2 calls    abc.Md5sumsFile
       0.013s      1 call     abc.TextFile
       0.009s      1 call     diffoscope.comparators.elf.MonkeyPatchedElfSection

## container_extract (total time: 2.440s)
       1.833s     22 calls    diffoscope.comparators.xz.XzContainer
       0.319s    452 calls    diffoscope.comparators.deb.DebTarContainer
       0.275s     26 calls    diffoscope.comparators.deb.DebContainer
       0.012s     24 calls    diffoscope.comparators.tar.TarContainer

## diff (total time: 0.151s)
       0.151s     15 calls    linediff

## has_same_content_as (total time: 0.014s)
       0.007s      4 calls    abc.DebFile
       0.005s      2 calls    abc.DebDataTarFile
       0.001s      6 calls    abc.TextFile
       0.000s      2 calls    abc.ElfFile
       0.000s      4 calls    abc.Md5sumsFile
       0.000s      4 calls    abc.XzFile
       0.000s      2 calls    diffoscope.comparators.utils.libarchive.LibarchiveSymlink
       0.000s     33 calls    diffoscope.comparators.elf.ElfSection
       0.000s      2 calls    abc.TarFile
       0.000s      1 call     diffoscope.comparators.binary.FilesystemFile
       0.000s      1 call     abc.DotChangesFile
       0.000s     10 calls    diffoscope.comparators.elf.ElfCodeSection
       0.000s      3 calls    diffoscope.comparators.elf.ElfStringSection
       0.000s      1 call     diffoscope.comparators.elf.MonkeyPatchedElfSection

## main (total time: 589.607s)
     589.591s      2 calls    outputs
       0.016s      1 call     cleanup

## open_archive (total time: 0.000s)
       0.000s     22 calls    diffoscope.comparators.xz.XzContainer
       0.000s     16 calls    diffoscope.comparators.tar.TarContainer
       0.000s     12 calls    diffoscope.comparators.deb.DebContainer
       0.000s      6 calls    diffoscope.comparators.deb.DebTarContainer

## output (total time: 0.268s)
       0.266s      1 call     html
       0.001s      1 call     text
       0.001s      1 call     json

## recognizes (total time: 1.623s)
       0.754s   1020 calls    diffoscope.comparators.utils.archive.ArchiveMember
       0.514s   2074 calls    diffoscope.comparators.utils.libarchive.LibarchiveMember
       0.255s     12 calls    diffoscope.comparators.binary.FilesystemFile
       0.100s    432 calls    diffoscope.comparators.debian.DebControlMember

## specialize (total time: 0.774s)
       0.774s     74 calls    specialize
Finished with result: success
Main processes terminated with: code=exited/status=1
Service runtime: 9min 49.945s
CPU time consumed: 11min 51.785s
Tue Mar 18 19:29:00 UTC 2025  W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate.
Tue Mar 18 19:29:00 UTC 2025  E: pymol failed to build reproducibly in unstable on amd64.
Tue Mar 18 19:29:01 UTC 2025  I: Submitting .buildinfo files to external archives:
Tue Mar 18 19:29:01 UTC 2025  I: Submitting 16K	b1/pymol_3.1.0+dfsg-1_amd64.buildinfo.asc
Tue Mar 18 19:29:02 UTC 2025  I: Submitting 16K	b2/pymol_3.1.0+dfsg-1_amd64.buildinfo.asc
Tue Mar 18 19:29:03 UTC 2025  I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Tue Mar 18 19:29:03 UTC 2025  I: Done submitting .buildinfo files.
Tue Mar 18 19:29:03 UTC 2025  I: Removing signed pymol_3.1.0+dfsg-1_amd64.buildinfo.asc files:
removed './b1/pymol_3.1.0+dfsg-1_amd64.buildinfo.asc'
removed './b2/pymol_3.1.0+dfsg-1_amd64.buildinfo.asc'