Sat Mar 22 00:13:07 UTC 2025 I: starting to build toil/unstable/arm64 on jenkins on '2025-03-22 00:12' Sat Mar 22 00:13:07 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_11/90126/console.log Sat Mar 22 00:13:07 UTC 2025 I: Downloading source for unstable/toil=8.0.0-4 --2025-03-22 00:13:07-- http://deb.debian.org/debian/pool/main/t/toil/toil_8.0.0-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2742 (2.7K) [text/prs.lines.tag] Saving to: ‘toil_8.0.0-4.dsc’ 0K .. 100% 346M=0s 2025-03-22 00:13:07 (346 MB/s) - ‘toil_8.0.0-4.dsc’ saved [2742/2742] Sat Mar 22 00:13:07 UTC 2025 I: toil_8.0.0-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: toil Binary: toil Architecture: all Version: 8.0.0-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Michael R. Crusoe Homepage: https://github.com/BD2KGenomics/toil Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/toil Vcs-Git: https://salsa.debian.org/med-team/toil.git Testsuite: autopkgtest, autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all:any, python3-setuptools, python3-setuptools-scm, python3-configargparse, python3-docker, python3-dill, cwltool (>= 3.1.20240112164112), python3-schema-salad (>= 8.4.20230128170514), python3-enlighten, python3-wdlparse, python3-pytest , python3-pytest-xdist , python3-boto3 (>= 1.17) , python3-stubserver , rsync , python3-yaml , docker.io , python3-urllib3, cwltool-doc , python3-sphinx , python3-sphinx-autoapi , python3-sphinx-autodoc-typehints , python3-sphinxcontrib.autoprogram , python3-pubsub , python3-doc , python3-tz , cwl-utils Package-List: toil deb net optional arch=all Checksums-Sha1: c279a6f58e6162bb80becec3eb50a0678b879bb0 7802310 toil_8.0.0.orig.tar.gz a246ec444c1bbaa832c35e885ae5dc25109b111f 21736 toil_8.0.0-4.debian.tar.xz Checksums-Sha256: c6964371621beed78a3e033f04f150923f861050511fd98d4d0381f6c1712c4b 7802310 toil_8.0.0.orig.tar.gz 85aeda9041c3e18f4adb49f1e7abd645423ae22fca0b1f7a051eafd72c9f738c 21736 toil_8.0.0-4.debian.tar.xz Files: 8b61fe59530c79376794d5ce7b2492ae 7802310 toil_8.0.0.orig.tar.gz 958ca2590bcef9451d7fc943af697bc0 21736 toil_8.0.0-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmfdk9YSHGNydXNvZUBk ZWJpYW4ub3JnAAoJEDwmdj9sZ+bibZUP+wRzP6NBh9siaDSaSDUNWCkLmeYOvlQr xrPSctG0dCB09Cd2+m0E+VGnxywVSNxstlduMYpF/Tf1XfunrsRED6ljm8ruLiXS OJy43TUFtLA/kAohJ9Hr4Yy/ZWIbmIL+wE/nCkSFWQlJa91V5zgxfaWaFloUL1sY j0ahZKXLS5Z24xGyMy9FoaF6HDCOXYW2GkT2TeI/CK/jYpAKBqEk5sY75+44atMr NLk/QFgm0aiGyTvMDQoM0SFAG4hXYQ2lOuBn1YYEui35+GT0VbWo+Ctwhv2PfYMM EfcP3ILQJI2aF2OC02nS+VW8nWtgRdZyiT8udoeQ++WqbJjtVFH3JqaeEhLDh/RP 2mmVBkrWW6acaZwSz8oj1IKh8sOm9f5BkbttHm4Qszg3FoP3olJdkSloSBJfIxeu /UpqJQs98qGzeGDfzEU1ndYe0LIRlQXP0859yn3J4shbqOu7xWuSbHFQtueS2JPq qqVWvIzeP0sYKoi+vr66ccMB7o2tCwIyB5H9wBlVzFwm3Iaa2LpMtCpkQCb88A0E WPu2B3LdZQE3z8OfZCn/Wds/sgMW2LJ1NG4ABWbXK24idTJ2bUCQlZGVRJdZDnEx XxJ6puG2lWinnlH/Vm2DPqYamCqiO0CnKgm+xC0AGEl3JLKmdUc+0gHpKUmev83a r8MPxKJMY1iy =6OsS -----END PGP SIGNATURE----- Sat Mar 22 00:13:07 UTC 2025 I: Checking whether the package is not for us Sat Mar 22 00:13:07 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sat Mar 22 00:13:07 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sat Mar 22 00:21:29 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Mar 21 12:13:09 -12 2025 I: pbuilder-time-stamp: 1742602389 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [toil_8.0.0-4.dsc] I: copying [./toil_8.0.0.orig.tar.gz] I: copying [./toil_8.0.0-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./toil_8.0.0-4.dsc: unsupported subcommand dpkg-source: info: extracting toil in toil-8.0.0 dpkg-source: info: unpacking toil_8.0.0.orig.tar.gz dpkg-source: info: unpacking toil_8.0.0-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pyproject.toml dpkg-source: info: applying fix_tests dpkg-source: info: applying needs_aws-proxyfix dpkg-source: info: applying intersphinx dpkg-source: info: applying setting_version.patch dpkg-source: info: applying no_galaxy_lib dpkg-source: info: applying debianize_docs dpkg-source: info: applying soften-mesos-deps dpkg-source: info: applying atomic_copy_as_alternative.patch dpkg-source: info: applying soften-cwltool-dep.patch dpkg-source: info: applying accept_debian_packaged_docker_version.patch dpkg-source: info: applying allow_newer_requests dpkg-source: info: applying soften-psutil I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2483255/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='39abc7ce35f3468fb460648e725ed081' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2483255' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/pbuilderrc_zFhz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/b1 --logfile b1/build.log toil_8.0.0-4.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-32-cloud-arm64 #1 SMP Debian 6.1.129-1 (2025-03-06) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2483255/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all:any, python3-setuptools, python3-setuptools-scm, python3-configargparse, python3-docker, python3-dill, cwltool (>= 3.1.20240112164112), python3-schema-salad (>= 8.4.20230128170514), python3-enlighten, python3-wdlparse, python3-pytest, python3-pytest-xdist, python3-boto3 (>= 1.17), python3-stubserver, rsync, python3-yaml, docker.io, python3-urllib3, cwltool-doc, python3-sphinx, python3-sphinx-autoapi, python3-sphinx-autodoc-typehints, python3-sphinxcontrib.autoprogram, python3-pubsub, python3-doc, python3-tz, cwl-utils dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19921 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all:any. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools-scm; however: Package python3-setuptools-scm is not installed. pbuilder-satisfydepends-dummy depends on python3-configargparse; however: Package python3-configargparse is not installed. pbuilder-satisfydepends-dummy depends on python3-docker; however: Package python3-docker is not installed. pbuilder-satisfydepends-dummy depends on python3-dill; however: Package python3-dill is not installed. pbuilder-satisfydepends-dummy depends on cwltool (>= 3.1.20240112164112); however: Package cwltool is not installed. pbuilder-satisfydepends-dummy depends on python3-schema-salad (>= 8.4.20230128170514); however: Package python3-schema-salad is not installed. pbuilder-satisfydepends-dummy depends on python3-enlighten; however: Package python3-enlighten is not installed. pbuilder-satisfydepends-dummy depends on python3-wdlparse; however: Package python3-wdlparse is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-boto3 (>= 1.17); however: Package python3-boto3 is not installed. pbuilder-satisfydepends-dummy depends on python3-stubserver; however: Package python3-stubserver is not installed. pbuilder-satisfydepends-dummy depends on rsync; however: Package rsync is not installed. pbuilder-satisfydepends-dummy depends on python3-yaml; however: Package python3-yaml is not installed. pbuilder-satisfydepends-dummy depends on docker.io; however: Package docker.io is not installed. pbuilder-satisfydepends-dummy depends on python3-urllib3; however: Package python3-urllib3 is not installed. pbuilder-satisfydepends-dummy depends on cwltool-doc; however: Package cwltool-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-autoapi; however: Package python3-sphinx-autoapi is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-autodoc-typehints; however: Package python3-sphinx-autodoc-typehints is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.autoprogram; however: Package python3-sphinxcontrib.autoprogram is not installed. pbuilder-satisfydepends-dummy depends on python3-pubsub; however: Package python3-pubsub is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-tz; however: Package python3-tz is not installed. pbuilder-satisfydepends-dummy depends on cwl-utils; however: Package cwl-utils is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} containerd{a} cwl-upgrader{a} cwl-utils{a} cwltool{a} cwltool-doc{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docker.io{a} docutils-common{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lato{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} iptables{a} libabsl20240722{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgcrypt20{a} libgd3{a} libglib2.0-0t64{a} libgpg-error0{a} libgraphite2-3{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu76{a} libimagequant0{a} libip4tc2{a} libip6tc2{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} liblab-gamut1{a} liblerc4{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmnl0{a} libnetfilter-conntrack3{a} libnfnetlink0{a} libnftnl11{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpopt0{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6t64{a} libxtables12{a} libyaml-0-2{a} libyuv0{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-all{a} python3-antlr4{a} python3-arcp{a} python3-argcomplete{a} python3-astroid{a} python3-autocommand{a} python3-babel{a} python3-blessed{a} python3-boto3{a} python3-botocore{a} python3-build{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-coloredlogs{a} python3-configargparse{a} python3-cwl-utils{a} python3-dateutil{a} python3-defusedxml{a} python3-dill{a} python3-doc{a} python3-docker{a} python3-docutils{a} python3-enlighten{a} python3-execnet{a} python3-filelock{a} python3-humanfriendly{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jmespath{a} python3-lxml{a} python3-markdown-it{a} python3-markupsafe{a} python3-mdurl{a} python3-minimal{a} python3-mistune{a} python3-more-itertools{a} python3-msgpack{a} python3-mypy-extensions{a} python3-networkx{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-prefixed{a} python3-prov{a} python3-psutil{a} python3-pubsub{a} python3-pydot{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytest-xdist{a} python3-pytz{a} python3-rdflib{a} python3-requests{a} python3-rich{a} python3-rich-argparse{a} python3-roman{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-s3transfer{a} python3-schema-salad{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-autoapi{a} python3-sphinx-autodoc-typehints{a} python3-sphinxcontrib.autoprogram{a} python3-spython{a} python3-stubserver{a} python3-toml{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wcwidth{a} python3-wdlparse{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.13{a} python3.13-doc{a} python3.13-minimal{a} readline-common{a} rsync{a} runc{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} tini{a} tzdata{a} x11-common{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: apparmor black criu curl dbus-user-session docker-cli fonts-liberation git javascript-common libarchive-cpio-perl libglib2.0-data libgpg-error-l10n libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils lynx needrestart nftables nodejs python3-bs4 python3-cssselect python3-gdal python3-html5lib python3-html5rdf python3-matplotlib python3-numpy python3-orjson python3-pil python3-pygraphviz python3-scipy shared-mime-info wget xdg-user-dirs 0 packages upgraded, 244 newly installed, 0 to remove and 0 not upgraded. Need to get 145 MB of archives. After unpacking 740 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 runc arm64 1.1.15+ds1-2+b1 [2724 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 containerd arm64 1.7.24~ds1-4+b2 [19.2 MB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libip4tc2 arm64 1.8.11-2 [19.6 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 libip6tc2 arm64 1.8.11-2 [19.8 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libxtables12 arm64 1.8.11-2 [30.6 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 libmnl0 arm64 1.0.5-3 [11.9 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libnfnetlink0 arm64 1.0.2-3 [13.9 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libnetfilter-conntrack3 arm64 1.1.0-1 [39.7 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libnftnl11 arm64 1.2.8-1 [60.8 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 iptables arm64 1.8.11-2 [354 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 tini arm64 0.19.0-1+b1 [229 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 docker.io arm64 26.1.5+dfsg1-9+b1 [15.1 MB] Get: 14 http://deb.debian.org/debian unstable/main arm64 fonts-lato all 2.015-1 [2780 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.2-2 [853 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.0-1 [92.8 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.2-2 [1995 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.2-2 [27.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025a-2 [259 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.7-1 [21.2 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.2-2 [1888 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.2-2 [746 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.2-2 [10.1 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.2-2 [28.1 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libpopt0 arm64 1.19+dfsg-2 [42.8 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 rsync arm64 3.4.1+ds1-3 [408 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31 [15.4 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.4.1-1 [1390 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20241223 [164 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-3 [337 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-3 [103 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-3 [43.5 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.4-5 [92.0 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-7 [285 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-3 [862 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-1 [770 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.8.0-1 [724 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 58 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.8.0-1 [222 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml.clib arm64 0.2.12+ds-1+b1 [117 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 62 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer arm64 3.4.1-1+b1 [119 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.10-1 [42.0 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-2 [114 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-4 [72.1 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 python3-msgpack arm64 1.0.3-3+b5 [77.4 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 python3-cachecontrol all 0.14.2-1 [18.3 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 python3-mistune all 3.0.2-2 [33.2 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 python3-mypy-extensions all 1.0.0-1 [6064 B] Get: 71 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 python3-rdflib all 7.1.1-2 [472 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 python3-filelock all 3.17.0-1 [12.7 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-schema-salad arm64 8.8.20241206093842-2+b1 [1053 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 cwl-upgrader all 1.2.12-1 [15.7 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.2-1 [55.3 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-cwl-utils all 0.37-1 [137 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 cwl-utils all 0.37-1 [3932 B] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-argcomplete all 3.5.3-1 [40.4 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 python3-humanfriendly all 10.0-6 [85.6 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-coloredlogs all 15.0.1-1 [47.4 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 libicu76 arm64 76.1-3 [9526 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.3+b1 [630 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 libgpg-error0 arm64 1.51-3 [78.5 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libgcrypt20 arm64 1.11.0-7 [742 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libxslt1.1 arm64 1.1.35-1.2 [221 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3-lxml arm64 5.3.1-1+b1 [1139 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-networkx all 3.2.1-5 [13.0 MB] Get: 92 http://deb.debian.org/debian unstable/main arm64 python3-prov all 2.0.1-1 [95.1 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 python3-psutil arm64 7.0.0-1 [220 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 libann0 arm64 1.1.2+doc-9+b2 [24.1 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 libcdt5 arm64 2.42.4-3 [39.2 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libcgraph6 arm64 2.42.4-3 [61.1 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 libaom3 arm64 3.12.0-1 [1672 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libdav1d7 arm64 1.5.1-1 [252 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libabsl20240722 arm64 20240722.0-1.5 [452 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libgav1-1 arm64 0.19.0-3+b1 [491 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 librav1e0.7 arm64 0.7.1-9+b1 [661 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1558 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3.1 [173 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libyuv0 arm64 0.0.1904.20250204-1 [137 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libavif16 arm64 1.2.1-1 [125 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.47-1.1 [274 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-2.2 [318 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-2.2 [387 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libheif-plugin-dav1d arm64 1.19.7-1 [11.5 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 libde265-0 arm64 1.0.15-1+b3 [153 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 libheif-plugin-libde265 arm64 1.19.7-1 [15.1 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 libheif1 arm64 1.19.7-1 [442 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 libimagequant0 arm64 2.18.0-1+b2 [34.6 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.84.0-2 [1424 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.2.0-1+b1 [442 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 libraqm0 arm64 0.10.2-1 [13.6 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-1+b1 [42.5 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b3 [53.4 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libgd3 arm64 2.3.3-12+b1 [115 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libgts-0.7-5t64 arm64 0.7.6+darcs121130-5.2+b1 [145 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b4 [27.2 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-1+b1 [483 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libltdl7 arm64 2.5.4-4 [415 kB] Get: 144 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-2.2 [463 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.56.3-1 [213 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [52.9 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [33.7 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 libpathplan4 arm64 2.42.4-3 [41.2 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 libgvc6 arm64 2.42.4-3 [629 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 libgvpr2 arm64 2.42.4-3 [181 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 liblab-gamut1 arm64 2.42.4-3 [198 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+24 [217 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.2+b2 [173 kB] Get: 159 http://deb.debian.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-3+b4 [55.7 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.16-1 [195 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 graphviz arm64 2.42.4-3 [572 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 python3-pydot all 2.0.0-3 [32.6 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 python3-mdurl all 0.1.2-1 [9444 B] Get: 164 http://deb.debian.org/debian unstable/main arm64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 python3-rich all 13.9.4-1 [203 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 python3-rich-argparse all 1.6.0-2 [16.9 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 python3-spython all 0.3.13-2 [55.2 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 python3-arcp all 0.2.1-7 [13.6 kB] Get: 170 http://deb.debian.org/debian unstable/main arm64 cwltool all 3.1.20250110105449-3 [514 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 cwltool-doc all 3.1.20250110105449-3 [312 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 183 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.1 [920 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250308 [115 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 193 http://deb.debian.org/debian unstable/main arm64 libjson-perl all 4.10000-1 [87.5 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-2 [49.2 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 python3-toml all 0.10.2-1 [16.2 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.45.1-1 [56.7 kB] Get: 198 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.2-1 [36.0 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20250308 [11.7 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 202 http://deb.debian.org/debian unstable/main arm64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.2-2 [1044 B] Get: 204 http://deb.debian.org/debian unstable/main arm64 python3-antlr4 all 4.9.2-1 [98.1 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 python3-astroid all 3.3.8-2 [213 kB] Get: 206 http://deb.debian.org/debian unstable/main arm64 python3-babel all 2.17.0-1 [117 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 python3-six all 1.17.0-1 [16.5 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 209 http://deb.debian.org/debian unstable/main arm64 python3-blessed all 1.20.0-2 [54.3 kB] Get: 210 http://deb.debian.org/debian unstable/main arm64 python3-jmespath all 1.0.1-1 [21.1 kB] Get: 211 http://deb.debian.org/debian unstable/main arm64 python3-botocore all 1.37.9+repack-1 [7311 kB] Get: 212 http://deb.debian.org/debian unstable/main arm64 python3-s3transfer all 0.11.2-2 [57.3 kB] Get: 213 http://deb.debian.org/debian unstable/main arm64 python3-boto3 all 1.37.9-1 [339 kB] Get: 214 http://deb.debian.org/debian unstable/main arm64 python3-configargparse all 1.7-2 [31.4 kB] Get: 215 http://deb.debian.org/debian unstable/main arm64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 216 http://deb.debian.org/debian unstable/main arm64 python3-dill all 0.3.9-1 [83.5 kB] Get: 217 http://deb.debian.org/debian unstable/main arm64 python3.13-doc all 3.13.2-2 [15.3 MB] Get: 218 http://deb.debian.org/debian unstable/main arm64 python3-doc all 3.13.2-2 [10.3 kB] Get: 219 http://deb.debian.org/debian unstable/main arm64 python3-docker all 7.1.0-2 [89.8 kB] Get: 220 http://deb.debian.org/debian unstable/main arm64 python3-roman all 5.0-1 [10.6 kB] Get: 221 http://deb.debian.org/debian unstable/main arm64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 222 http://deb.debian.org/debian unstable/main arm64 python3-prefixed all 0.7.0-1 [7984 B] Get: 223 http://deb.debian.org/debian unstable/main arm64 python3-enlighten arm64 1.11.2-1 [41.4 kB] Get: 224 http://deb.debian.org/debian unstable/main arm64 python3-execnet all 2.1.1-1 [40.2 kB] Get: 225 http://deb.debian.org/debian unstable/main arm64 python3-imagesize all 1.4.1-1 [6688 B] Get: 226 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 227 http://deb.debian.org/debian unstable/main arm64 python3-markupsafe arm64 2.1.5-1+b4 [14.1 kB] Get: 228 http://deb.debian.org/debian unstable/main arm64 python3-jinja2 all 3.1.5-2 [107 kB] Get: 229 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 230 http://deb.debian.org/debian unstable/main arm64 python3-pubsub all 4.0.3-7 [46.7 kB] Get: 231 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.5-1 [250 kB] Get: 232 http://deb.debian.org/debian unstable/main arm64 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 233 http://deb.debian.org/debian unstable/main arm64 python3-pytz all 2025.1-3 [150 kB] Get: 234 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.2.0-1 [41.0 kB] Get: 235 http://deb.debian.org/debian unstable/main arm64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 236 http://deb.debian.org/debian unstable/main arm64 sphinx-common all 8.1.3-5 [617 kB] Get: 237 http://deb.debian.org/debian unstable/main arm64 python3-sphinx all 8.1.3-5 [468 kB] Get: 238 http://deb.debian.org/debian unstable/main arm64 python3-yaml arm64 6.0.2-1+b2 [122 kB] Get: 239 http://deb.debian.org/debian unstable/main arm64 python3-sphinx-autoapi all 3.3.3-1 [108 kB] Get: 240 http://deb.debian.org/debian unstable/main arm64 python3-sphinx-autodoc-typehints all 2.3.0-2 [25.3 kB] Get: 241 http://deb.debian.org/debian unstable/main arm64 python3-sphinxcontrib.autoprogram all 0.1.9-1 [10.6 kB] Get: 242 http://deb.debian.org/debian unstable/main arm64 python3-stubserver all 1.1-4 [7764 B] Get: 243 http://deb.debian.org/debian unstable/main arm64 python3-tz all 2025.1-3 [4004 B] Get: 244 http://deb.debian.org/debian unstable/main arm64 python3-wdlparse all 0.1.0-3 [66.1 kB] Fetched 145 MB in 2s (88.6 MB/s) Preconfiguring packages ... Selecting previously unselected package runc. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19921 files and directories currently installed.) Preparing to unpack .../00-runc_1.1.15+ds1-2+b1_arm64.deb ... Unpacking runc (1.1.15+ds1-2+b1) ... Selecting previously unselected package containerd. Preparing to unpack .../01-containerd_1.7.24~ds1-4+b2_arm64.deb ... Unpacking containerd (1.7.24~ds1-4+b2) ... Selecting previously unselected package libip4tc2:arm64. Preparing to unpack .../02-libip4tc2_1.8.11-2_arm64.deb ... Unpacking libip4tc2:arm64 (1.8.11-2) ... Selecting previously unselected package libip6tc2:arm64. Preparing to unpack .../03-libip6tc2_1.8.11-2_arm64.deb ... Unpacking libip6tc2:arm64 (1.8.11-2) ... Selecting previously unselected package libxtables12:arm64. Preparing to unpack .../04-libxtables12_1.8.11-2_arm64.deb ... Unpacking libxtables12:arm64 (1.8.11-2) ... Selecting previously unselected package netbase. Preparing to unpack .../05-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package libmnl0:arm64. Preparing to unpack .../06-libmnl0_1.0.5-3_arm64.deb ... Unpacking libmnl0:arm64 (1.0.5-3) ... Selecting previously unselected package libnfnetlink0:arm64. Preparing to unpack .../07-libnfnetlink0_1.0.2-3_arm64.deb ... Unpacking libnfnetlink0:arm64 (1.0.2-3) ... Selecting previously unselected package libnetfilter-conntrack3:arm64. Preparing to unpack .../08-libnetfilter-conntrack3_1.1.0-1_arm64.deb ... Unpacking libnetfilter-conntrack3:arm64 (1.1.0-1) ... Selecting previously unselected package libnftnl11:arm64. Preparing to unpack .../09-libnftnl11_1.2.8-1_arm64.deb ... Unpacking libnftnl11:arm64 (1.2.8-1) ... Selecting previously unselected package iptables. Preparing to unpack .../10-iptables_1.8.11-2_arm64.deb ... Unpacking iptables (1.8.11-2) ... Selecting previously unselected package tini. Preparing to unpack .../11-tini_0.19.0-1+b1_arm64.deb ... Unpacking tini (0.19.0-1+b1) ... Selecting previously unselected package docker.io. Preparing to unpack .../12-docker.io_26.1.5+dfsg1-9+b1_arm64.deb ... Unpacking docker.io (26.1.5+dfsg1-9+b1) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../13-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../14-libpython3.13-minimal_3.13.2-2_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.2-2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../15-libexpat1_2.7.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.0-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../16-python3.13-minimal_3.13.2-2_arm64.deb ... Unpacking python3.13-minimal (3.13.2-2) ... Setting up libpython3.13-minimal:arm64 (3.13.2-2) ... Setting up libexpat1:arm64 (2.7.0-1) ... Setting up python3.13-minimal (3.13.2-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20822 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.2-2_arm64.deb ... Unpacking python3-minimal (3.13.2-2) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package tzdata. Preparing to unpack .../2-tzdata_2025a-2_all.deb ... Unpacking tzdata (2025a-2) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../3-libffi8_3.4.7-1_arm64.deb ... Unpacking libffi8:arm64 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../5-libreadline8t64_8.2-6_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../6-libpython3.13-stdlib_3.13.2-2_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.2-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../7-python3.13_3.13.2-2_arm64.deb ... Unpacking python3.13 (3.13.2-2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.13.2-2_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.2-2) ... Setting up python3-minimal (3.13.2-2) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21825 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.2-2_arm64.deb ... Unpacking python3 (3.13.2-2) ... Selecting previously unselected package libpopt0:arm64. Preparing to unpack .../001-libpopt0_1.19+dfsg-2_arm64.deb ... Unpacking libpopt0:arm64 (1.19+dfsg-2) ... Selecting previously unselected package rsync. Preparing to unpack .../002-rsync_3.4.1+ds1-3_arm64.deb ... Unpacking rsync (3.4.1+ds1-3) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.4.1-1_arm64.deb ... Unpacking openssl (3.4.1-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20241223_all.deb ... Unpacking ca-certificates (20241223) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.46-3_arm64.deb ... Unpacking libmagic-mgc (1:5.46-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../008-libmagic1t64_1%3a5.46-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-3) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.46-3_arm64.deb ... Unpacking file (1:5.46-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.23.1-1_arm64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.40.4-5_arm64.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../014-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.19-7_arm64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../021-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../022-python3-more-itertools_10.6.0-1_all.deb ... Unpacking python3-more-itertools (10.6.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../023-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../024-python3-typeguard_4.4.2-1_all.deb ... Unpacking python3-typeguard (4.4.2-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../025-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../026-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../027-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../028-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../029-python3-setuptools_75.8.0-1_all.deb ... Unpacking python3-setuptools (75.8.0-1) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../030-python3-jaraco.context_6.0.1-1_all.deb ... Unpacking python3-jaraco.context (6.0.1-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../031-python3-pkg-resources_75.8.0-1_all.deb ... Unpacking python3-pkg-resources (75.8.0-1) ... Selecting previously unselected package python3-ruamel.yaml.clib. Preparing to unpack .../032-python3-ruamel.yaml.clib_0.2.12+ds-1+b1_arm64.deb ... Unpacking python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Selecting previously unselected package python3-ruamel.yaml. Preparing to unpack .../033-python3-ruamel.yaml_0.18.10+ds-1_all.deb ... Unpacking python3-ruamel.yaml (0.18.10+ds-1) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../034-python3-certifi_2025.1.31+ds-1_all.deb ... Unpacking python3-certifi (2025.1.31+ds-1) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../035-python3-charset-normalizer_3.4.1-1+b1_arm64.deb ... Unpacking python3-charset-normalizer (3.4.1-1+b1) ... Selecting previously unselected package python3-idna. Preparing to unpack .../036-python3-idna_3.10-1_all.deb ... Unpacking python3-idna (3.10-1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../037-python3-urllib3_2.3.0-2_all.deb ... Unpacking python3-urllib3 (2.3.0-2) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../038-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Selecting previously unselected package python3-requests. Preparing to unpack .../039-python3-requests_2.32.3+dfsg-4_all.deb ... Unpacking python3-requests (2.32.3+dfsg-4) ... Selecting previously unselected package python3-msgpack. Preparing to unpack .../040-python3-msgpack_1.0.3-3+b5_arm64.deb ... Unpacking python3-msgpack (1.0.3-3+b5) ... Selecting previously unselected package python3-cachecontrol. Preparing to unpack .../041-python3-cachecontrol_0.14.2-1_all.deb ... Unpacking python3-cachecontrol (0.14.2-1) ... Selecting previously unselected package python3-mistune. Preparing to unpack .../042-python3-mistune_3.0.2-2_all.deb ... Unpacking python3-mistune (3.0.2-2) ... Selecting previously unselected package python3-mypy-extensions. Preparing to unpack .../043-python3-mypy-extensions_1.0.0-1_all.deb ... Unpacking python3-mypy-extensions (1.0.0-1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../044-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-rdflib. Preparing to unpack .../045-python3-rdflib_7.1.1-2_all.deb ... Unpacking python3-rdflib (7.1.1-2) ... Selecting previously unselected package python3-filelock. Preparing to unpack .../046-python3-filelock_3.17.0-1_all.deb ... Unpacking python3-filelock (3.17.0-1) ... Selecting previously unselected package fonts-glyphicons-halflings. Preparing to unpack .../047-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Selecting previously unselected package libjs-bootstrap. Preparing to unpack .../048-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... Selecting previously unselected package python3-schema-salad. Preparing to unpack .../049-python3-schema-salad_8.8.20241206093842-2+b1_arm64.deb ... Unpacking python3-schema-salad (8.8.20241206093842-2+b1) ... Selecting previously unselected package cwl-upgrader. Preparing to unpack .../050-cwl-upgrader_1.2.12-1_all.deb ... Unpacking cwl-upgrader (1.2.12-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../051-python3-packaging_24.2-1_all.deb ... Unpacking python3-packaging (24.2-1) ... Selecting previously unselected package python3-cwl-utils. Preparing to unpack .../052-python3-cwl-utils_0.37-1_all.deb ... Unpacking python3-cwl-utils (0.37-1) ... Selecting previously unselected package cwl-utils. Preparing to unpack .../053-cwl-utils_0.37-1_all.deb ... Unpacking cwl-utils (0.37-1) ... Selecting previously unselected package python3-argcomplete. Preparing to unpack .../054-python3-argcomplete_3.5.3-1_all.deb ... Unpacking python3-argcomplete (3.5.3-1) ... Selecting previously unselected package python3-humanfriendly. Preparing to unpack .../055-python3-humanfriendly_10.0-6_all.deb ... Unpacking python3-humanfriendly (10.0-6) ... Selecting previously unselected package python3-coloredlogs. Preparing to unpack .../056-python3-coloredlogs_15.0.1-1_all.deb ... Unpacking python3-coloredlogs (15.0.1-1) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../057-python3-dateutil_2.9.0-4_all.deb ... Unpacking python3-dateutil (2.9.0-4) ... Selecting previously unselected package libicu76:arm64. Preparing to unpack .../058-libicu76_76.1-3_arm64.deb ... Unpacking libicu76:arm64 (76.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../059-libxml2_2.12.7+dfsg+really2.9.14-0.3+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.3+b1) ... Selecting previously unselected package libgpg-error0:arm64. Preparing to unpack .../060-libgpg-error0_1.51-3_arm64.deb ... Unpacking libgpg-error0:arm64 (1.51-3) ... Selecting previously unselected package libgcrypt20:arm64. Preparing to unpack .../061-libgcrypt20_1.11.0-7_arm64.deb ... Unpacking libgcrypt20:arm64 (1.11.0-7) ... Selecting previously unselected package libxslt1.1:arm64. Preparing to unpack .../062-libxslt1.1_1.1.35-1.2_arm64.deb ... Unpacking libxslt1.1:arm64 (1.1.35-1.2) ... Selecting previously unselected package python3-lxml:arm64. Preparing to unpack .../063-python3-lxml_5.3.1-1+b1_arm64.deb ... Unpacking python3-lxml:arm64 (5.3.1-1+b1) ... Selecting previously unselected package python3-networkx. Preparing to unpack .../064-python3-networkx_3.2.1-5_all.deb ... Unpacking python3-networkx (3.2.1-5) ... Selecting previously unselected package python3-prov. Preparing to unpack .../065-python3-prov_2.0.1-1_all.deb ... Unpacking python3-prov (2.0.1-1) ... Selecting previously unselected package python3-psutil. Preparing to unpack .../066-python3-psutil_7.0.0-1_arm64.deb ... Unpacking python3-psutil (7.0.0-1) ... Selecting previously unselected package libann0. Preparing to unpack .../067-libann0_1.1.2+doc-9+b2_arm64.deb ... Unpacking libann0 (1.1.2+doc-9+b2) ... Selecting previously unselected package libcdt5:arm64. Preparing to unpack .../068-libcdt5_2.42.4-3_arm64.deb ... Unpacking libcdt5:arm64 (2.42.4-3) ... Selecting previously unselected package libcgraph6:arm64. Preparing to unpack .../069-libcgraph6_2.42.4-3_arm64.deb ... Unpacking libcgraph6:arm64 (2.42.4-3) ... Selecting previously unselected package libaom3:arm64. Preparing to unpack .../070-libaom3_3.12.0-1_arm64.deb ... Unpacking libaom3:arm64 (3.12.0-1) ... Selecting previously unselected package libdav1d7:arm64. Preparing to unpack .../071-libdav1d7_1.5.1-1_arm64.deb ... Unpacking libdav1d7:arm64 (1.5.1-1) ... Selecting previously unselected package libabsl20240722:arm64. Preparing to unpack .../072-libabsl20240722_20240722.0-1.5_arm64.deb ... Unpacking libabsl20240722:arm64 (20240722.0-1.5) ... Selecting previously unselected package libgav1-1:arm64. Preparing to unpack .../073-libgav1-1_0.19.0-3+b1_arm64.deb ... Unpacking libgav1-1:arm64 (0.19.0-3+b1) ... Selecting previously unselected package librav1e0.7:arm64. Preparing to unpack .../074-librav1e0.7_0.7.1-9+b1_arm64.deb ... Unpacking librav1e0.7:arm64 (0.7.1-9+b1) ... Selecting previously unselected package libsvtav1enc2:arm64. Preparing to unpack .../075-libsvtav1enc2_2.3.0+dfsg-1_arm64.deb ... Unpacking libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../076-libjpeg62-turbo_1%3a2.1.5-3.1_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.1.5-3.1) ... Selecting previously unselected package libyuv0:arm64. Preparing to unpack .../077-libyuv0_0.0.1904.20250204-1_arm64.deb ... Unpacking libyuv0:arm64 (0.0.1904.20250204-1) ... Selecting previously unselected package libavif16:arm64. Preparing to unpack .../078-libavif16_1.2.1-1_arm64.deb ... Unpacking libavif16:arm64 (1.2.1-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../079-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:arm64. Preparing to unpack .../080-libpng16-16t64_1.6.47-1.1_arm64.deb ... Unpacking libpng16-16t64:arm64 (1.6.47-1.1) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../081-libfreetype6_2.13.3+dfsg-1_arm64.deb ... Unpacking libfreetype6:arm64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../082-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../083-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../084-fontconfig-config_2.15.0-2.2_arm64.deb ... Unpacking fontconfig-config (2.15.0-2.2) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../085-libfontconfig1_2.15.0-2.2_arm64.deb ... Unpacking libfontconfig1:arm64 (2.15.0-2.2) ... Selecting previously unselected package libsharpyuv0:arm64. Preparing to unpack .../086-libsharpyuv0_1.5.0-0.1_arm64.deb ... Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... Selecting previously unselected package libheif-plugin-dav1d:arm64. Preparing to unpack .../087-libheif-plugin-dav1d_1.19.7-1_arm64.deb ... Unpacking libheif-plugin-dav1d:arm64 (1.19.7-1) ... Selecting previously unselected package libde265-0:arm64. Preparing to unpack .../088-libde265-0_1.0.15-1+b3_arm64.deb ... Unpacking libde265-0:arm64 (1.0.15-1+b3) ... Selecting previously unselected package libheif-plugin-libde265:arm64. Preparing to unpack .../089-libheif-plugin-libde265_1.19.7-1_arm64.deb ... Unpacking libheif-plugin-libde265:arm64 (1.19.7-1) ... Selecting previously unselected package libheif1:arm64. Preparing to unpack .../090-libheif1_1.19.7-1_arm64.deb ... Unpacking libheif1:arm64 (1.19.7-1) ... Selecting previously unselected package libimagequant0:arm64. Preparing to unpack .../091-libimagequant0_2.18.0-1+b2_arm64.deb ... Unpacking libimagequant0:arm64 (2.18.0-1+b2) ... Selecting previously unselected package libfribidi0:arm64. Preparing to unpack .../092-libfribidi0_1.0.16-1_arm64.deb ... Unpacking libfribidi0:arm64 (1.0.16-1) ... Selecting previously unselected package libglib2.0-0t64:arm64. Preparing to unpack .../093-libglib2.0-0t64_2.84.0-2_arm64.deb ... Unpacking libglib2.0-0t64:arm64 (2.84.0-2) ... Selecting previously unselected package libgraphite2-3:arm64. Preparing to unpack .../094-libgraphite2-3_1.3.14-2+b1_arm64.deb ... Unpacking libgraphite2-3:arm64 (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:arm64. Preparing to unpack .../095-libharfbuzz0b_10.2.0-1+b1_arm64.deb ... Unpacking libharfbuzz0b:arm64 (10.2.0-1+b1) ... Selecting previously unselected package libraqm0:arm64. Preparing to unpack .../096-libraqm0_0.10.2-1_arm64.deb ... Unpacking libraqm0:arm64 (0.10.2-1) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../097-libdeflate0_1.23-1+b1_arm64.deb ... Unpacking libdeflate0:arm64 (1.23-1+b1) ... Selecting previously unselected package libjbig0:arm64. Preparing to unpack .../098-libjbig0_2.1-6.1+b2_arm64.deb ... Unpacking libjbig0:arm64 (2.1-6.1+b2) ... Selecting previously unselected package liblerc4:arm64. Preparing to unpack .../099-liblerc4_4.0.0+ds-5_arm64.deb ... Unpacking liblerc4:arm64 (4.0.0+ds-5) ... Selecting previously unselected package libwebp7:arm64. Preparing to unpack .../100-libwebp7_1.5.0-0.1_arm64.deb ... Unpacking libwebp7:arm64 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:arm64. Preparing to unpack .../101-libtiff6_4.5.1+git230720-5_arm64.deb ... Unpacking libtiff6:arm64 (4.5.1+git230720-5) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../102-libxau6_1%3a1.0.11-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../103-libxdmcp6_1%3a1.1.5-1_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../104-libxcb1_1.17.0-2+b1_arm64.deb ... Unpacking libxcb1:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../105-libx11-data_2%3a1.8.12-1_all.deb ... Unpacking libx11-data (2:1.8.12-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../106-libx11-6_2%3a1.8.12-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.8.12-1) ... Selecting previously unselected package libxpm4:arm64. Preparing to unpack .../107-libxpm4_1%3a3.5.17-1+b3_arm64.deb ... Unpacking libxpm4:arm64 (1:3.5.17-1+b3) ... Selecting previously unselected package libgd3:arm64. Preparing to unpack .../108-libgd3_2.3.3-12+b1_arm64.deb ... Unpacking libgd3:arm64 (2.3.3-12+b1) ... Selecting previously unselected package libgts-0.7-5t64:arm64. Preparing to unpack .../109-libgts-0.7-5t64_0.7.6+darcs121130-5.2+b1_arm64.deb ... Unpacking libgts-0.7-5t64:arm64 (0.7.6+darcs121130-5.2+b1) ... Selecting previously unselected package libpixman-1-0:arm64. Preparing to unpack .../110-libpixman-1-0_0.44.0-3_arm64.deb ... Unpacking libpixman-1-0:arm64 (0.44.0-3) ... Selecting previously unselected package libxcb-render0:arm64. Preparing to unpack .../111-libxcb-render0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-render0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:arm64. Preparing to unpack .../112-libxcb-shm0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-shm0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../113-libxext6_2%3a1.3.4-1+b3_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.4-1+b3) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../114-libxrender1_1%3a0.9.10-1.1+b4_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1.1+b4) ... Selecting previously unselected package libcairo2:arm64. Preparing to unpack .../115-libcairo2_1.18.4-1+b1_arm64.deb ... Unpacking libcairo2:arm64 (1.18.4-1+b1) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../116-libltdl7_2.5.4-4_arm64.deb ... Unpacking libltdl7:arm64 (2.5.4-4) ... Selecting previously unselected package fontconfig. Preparing to unpack .../117-fontconfig_2.15.0-2.2_arm64.deb ... Unpacking fontconfig (2.15.0-2.2) ... Selecting previously unselected package libthai-data. Preparing to unpack .../118-libthai-data_0.1.29-2_all.deb ... Unpacking libthai-data (0.1.29-2) ... Selecting previously unselected package libdatrie1:arm64. Preparing to unpack .../119-libdatrie1_0.2.13-3+b1_arm64.deb ... Unpacking libdatrie1:arm64 (0.2.13-3+b1) ... Selecting previously unselected package libthai0:arm64. Preparing to unpack .../120-libthai0_0.1.29-2+b1_arm64.deb ... Unpacking libthai0:arm64 (0.1.29-2+b1) ... Selecting previously unselected package libpango-1.0-0:arm64. Preparing to unpack .../121-libpango-1.0-0_1.56.3-1_arm64.deb ... Unpacking libpango-1.0-0:arm64 (1.56.3-1) ... Selecting previously unselected package libpangoft2-1.0-0:arm64. Preparing to unpack .../122-libpangoft2-1.0-0_1.56.3-1_arm64.deb ... Unpacking libpangoft2-1.0-0:arm64 (1.56.3-1) ... Selecting previously unselected package libpangocairo-1.0-0:arm64. Preparing to unpack .../123-libpangocairo-1.0-0_1.56.3-1_arm64.deb ... Unpacking libpangocairo-1.0-0:arm64 (1.56.3-1) ... Selecting previously unselected package libpathplan4:arm64. Preparing to unpack .../124-libpathplan4_2.42.4-3_arm64.deb ... Unpacking libpathplan4:arm64 (2.42.4-3) ... Selecting previously unselected package libgvc6. Preparing to unpack .../125-libgvc6_2.42.4-3_arm64.deb ... Unpacking libgvc6 (2.42.4-3) ... Selecting previously unselected package libgvpr2:arm64. Preparing to unpack .../126-libgvpr2_2.42.4-3_arm64.deb ... Unpacking libgvpr2:arm64 (2.42.4-3) ... Selecting previously unselected package liblab-gamut1:arm64. Preparing to unpack .../127-liblab-gamut1_2.42.4-3_arm64.deb ... Unpacking liblab-gamut1:arm64 (2.42.4-3) ... Selecting previously unselected package x11-common. Preparing to unpack .../128-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package libice6:arm64. Preparing to unpack .../129-libice6_2%3a1.1.1-1_arm64.deb ... Unpacking libice6:arm64 (2:1.1.1-1) ... Selecting previously unselected package libsm6:arm64. Preparing to unpack .../130-libsm6_2%3a1.2.4-1_arm64.deb ... Unpacking libsm6:arm64 (2:1.2.4-1) ... Selecting previously unselected package libxt6t64:arm64. Preparing to unpack .../131-libxt6t64_1%3a1.2.1-1.2+b2_arm64.deb ... Unpacking libxt6t64:arm64 (1:1.2.1-1.2+b2) ... Selecting previously unselected package libxmu6:arm64. Preparing to unpack .../132-libxmu6_2%3a1.1.3-3+b4_arm64.deb ... Unpacking libxmu6:arm64 (2:1.1.3-3+b4) ... Selecting previously unselected package libxaw7:arm64. Preparing to unpack .../133-libxaw7_2%3a1.0.16-1_arm64.deb ... Unpacking libxaw7:arm64 (2:1.0.16-1) ... Selecting previously unselected package graphviz. Preparing to unpack .../134-graphviz_2.42.4-3_arm64.deb ... Unpacking graphviz (2.42.4-3) ... Selecting previously unselected package python3-pydot. Preparing to unpack .../135-python3-pydot_2.0.0-3_all.deb ... Unpacking python3-pydot (2.0.0-3) ... Selecting previously unselected package python3-mdurl. Preparing to unpack .../136-python3-mdurl_0.1.2-1_all.deb ... Unpacking python3-mdurl (0.1.2-1) ... Selecting previously unselected package python3-markdown-it. Preparing to unpack .../137-python3-markdown-it_3.0.0-2_all.deb ... Unpacking python3-markdown-it (3.0.0-2) ... Selecting previously unselected package python3-pygments. Preparing to unpack .../138-python3-pygments_2.18.0+dfsg-2_all.deb ... Unpacking python3-pygments (2.18.0+dfsg-2) ... Selecting previously unselected package python3-rich. Preparing to unpack .../139-python3-rich_13.9.4-1_all.deb ... Unpacking python3-rich (13.9.4-1) ... Selecting previously unselected package python3-rich-argparse. Preparing to unpack .../140-python3-rich-argparse_1.6.0-2_all.deb ... Unpacking python3-rich-argparse (1.6.0-2) ... Selecting previously unselected package python3-spython. Preparing to unpack .../141-python3-spython_0.3.13-2_all.deb ... Unpacking python3-spython (0.3.13-2) ... Selecting previously unselected package python3-arcp. Preparing to unpack .../142-python3-arcp_0.2.1-7_all.deb ... Unpacking python3-arcp (0.2.1-7) ... Selecting previously unselected package cwltool. Preparing to unpack .../143-cwltool_3.1.20250110105449-3_all.deb ... Unpacking cwltool (3.1.20250110105449-3) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../144-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../145-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../146-libjs-sphinxdoc_8.1.3-5_all.deb ... Unpacking libjs-sphinxdoc (8.1.3-5) ... Selecting previously unselected package fonts-font-awesome. Preparing to unpack .../147-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Selecting previously unselected package sphinx-rtd-theme-common. Preparing to unpack .../148-sphinx-rtd-theme-common_3.0.2+dfsg-2_all.deb ... Unpacking sphinx-rtd-theme-common (3.0.2+dfsg-2) ... Selecting previously unselected package cwltool-doc. Preparing to unpack .../149-cwltool-doc_3.1.20250110105449-3_all.deb ... Unpacking cwltool-doc (3.1.20250110105449-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../150-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../151-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../152-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../153-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../154-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../155-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../156-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../157-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../158-libunistring5_1.3-1_arm64.deb ... Unpacking libunistring5:arm64 (1.3-1) ... Selecting previously unselected package gettext. Preparing to unpack .../159-gettext_0.23.1-1_arm64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../160-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../161-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../162-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package dh-python. Preparing to unpack .../163-dh-python_6.20250308_all.deb ... Unpacking dh-python (6.20250308) ... Selecting previously unselected package xml-core. Preparing to unpack .../164-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package docutils-common. Preparing to unpack .../165-docutils-common_0.21.2+dfsg-2_all.deb ... Unpacking docutils-common (0.21.2+dfsg-2) ... Selecting previously unselected package libjson-perl. Preparing to unpack .../166-libjson-perl_4.10000-1_all.deb ... Unpacking libjson-perl (4.10000-1) ... Selecting previously unselected package libyaml-0-2:arm64. Preparing to unpack .../167-libyaml-0-2_0.2.5-2_arm64.deb ... Unpacking libyaml-0-2:arm64 (0.2.5-2) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../168-python3-pyproject-hooks_1.2.0-1_all.deb ... Unpacking python3-pyproject-hooks (1.2.0-1) ... Selecting previously unselected package python3-toml. Preparing to unpack .../169-python3-toml_0.10.2-1_all.deb ... Unpacking python3-toml (0.10.2-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../170-python3-wheel_0.45.1-1_all.deb ... Unpacking python3-wheel (0.45.1-1) ... Selecting previously unselected package python3-build. Preparing to unpack .../171-python3-build_1.2.2-1_all.deb ... Unpacking python3-build (1.2.2-1) ... Selecting previously unselected package python3-installer. Preparing to unpack .../172-python3-installer_0.7.0+dfsg1-3_all.deb ... Unpacking python3-installer (0.7.0+dfsg1-3) ... Selecting previously unselected package pybuild-plugin-pyproject. Preparing to unpack .../173-pybuild-plugin-pyproject_6.20250308_all.deb ... Unpacking pybuild-plugin-pyproject (6.20250308) ... Selecting previously unselected package python-babel-localedata. Preparing to unpack .../174-python-babel-localedata_2.17.0-1_all.deb ... Unpacking python-babel-localedata (2.17.0-1) ... Selecting previously unselected package python3-alabaster. Preparing to unpack .../175-python3-alabaster_0.7.16-0.1_all.deb ... Unpacking python3-alabaster (0.7.16-0.1) ... Selecting previously unselected package python3-all. Preparing to unpack .../176-python3-all_3.13.2-2_arm64.deb ... Unpacking python3-all (3.13.2-2) ... Selecting previously unselected package python3-antlr4. Preparing to unpack .../177-python3-antlr4_4.9.2-1_all.deb ... Unpacking python3-antlr4 (4.9.2-1) ... Selecting previously unselected package python3-astroid. Preparing to unpack .../178-python3-astroid_3.3.8-2_all.deb ... Unpacking python3-astroid (3.3.8-2) ... Selecting previously unselected package python3-babel. Preparing to unpack .../179-python3-babel_2.17.0-1_all.deb ... Unpacking python3-babel (2.17.0-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../180-python3-six_1.17.0-1_all.deb ... Unpacking python3-six (1.17.0-1) ... Selecting previously unselected package python3-wcwidth. Preparing to unpack .../181-python3-wcwidth_0.2.13+dfsg1-1_all.deb ... Unpacking python3-wcwidth (0.2.13+dfsg1-1) ... Selecting previously unselected package python3-blessed. Preparing to unpack .../182-python3-blessed_1.20.0-2_all.deb ... Unpacking python3-blessed (1.20.0-2) ... Selecting previously unselected package python3-jmespath. Preparing to unpack .../183-python3-jmespath_1.0.1-1_all.deb ... Unpacking python3-jmespath (1.0.1-1) ... Selecting previously unselected package python3-botocore. Preparing to unpack .../184-python3-botocore_1.37.9+repack-1_all.deb ... Unpacking python3-botocore (1.37.9+repack-1) ... Selecting previously unselected package python3-s3transfer. Preparing to unpack .../185-python3-s3transfer_0.11.2-2_all.deb ... Unpacking python3-s3transfer (0.11.2-2) ... Selecting previously unselected package python3-boto3. Preparing to unpack .../186-python3-boto3_1.37.9-1_all.deb ... Unpacking python3-boto3 (1.37.9-1) ... Selecting previously unselected package python3-configargparse. Preparing to unpack .../187-python3-configargparse_1.7-2_all.deb ... Unpacking python3-configargparse (1.7-2) ... Selecting previously unselected package python3-defusedxml. Preparing to unpack .../188-python3-defusedxml_0.7.1-3_all.deb ... Unpacking python3-defusedxml (0.7.1-3) ... Selecting previously unselected package python3-dill. Preparing to unpack .../189-python3-dill_0.3.9-1_all.deb ... Unpacking python3-dill (0.3.9-1) ... Selecting previously unselected package python3.13-doc. Preparing to unpack .../190-python3.13-doc_3.13.2-2_all.deb ... Unpacking python3.13-doc (3.13.2-2) ... Selecting previously unselected package python3-doc. Preparing to unpack .../191-python3-doc_3.13.2-2_all.deb ... Unpacking python3-doc (3.13.2-2) ... Selecting previously unselected package python3-docker. Preparing to unpack .../192-python3-docker_7.1.0-2_all.deb ... Unpacking python3-docker (7.1.0-2) ... Selecting previously unselected package python3-roman. Preparing to unpack .../193-python3-roman_5.0-1_all.deb ... Unpacking python3-roman (5.0-1) ... Selecting previously unselected package python3-docutils. Preparing to unpack .../194-python3-docutils_0.21.2+dfsg-2_all.deb ... Unpacking python3-docutils (0.21.2+dfsg-2) ... Selecting previously unselected package python3-prefixed. Preparing to unpack .../195-python3-prefixed_0.7.0-1_all.deb ... Unpacking python3-prefixed (0.7.0-1) ... Selecting previously unselected package python3-enlighten. Preparing to unpack .../196-python3-enlighten_1.11.2-1_arm64.deb ... Unpacking python3-enlighten (1.11.2-1) ... Selecting previously unselected package python3-execnet. Preparing to unpack .../197-python3-execnet_2.1.1-1_all.deb ... Unpacking python3-execnet (2.1.1-1) ... Selecting previously unselected package python3-imagesize. Preparing to unpack .../198-python3-imagesize_1.4.1-1_all.deb ... Unpacking python3-imagesize (1.4.1-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../199-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-markupsafe. Preparing to unpack .../200-python3-markupsafe_2.1.5-1+b4_arm64.deb ... Unpacking python3-markupsafe (2.1.5-1+b4) ... Selecting previously unselected package python3-jinja2. Preparing to unpack .../201-python3-jinja2_3.1.5-2_all.deb ... Unpacking python3-jinja2 (3.1.5-2) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../202-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-pubsub. Preparing to unpack .../203-python3-pubsub_4.0.3-7_all.deb ... Unpacking python3-pubsub (4.0.3-7) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../204-python3-pytest_8.3.5-1_all.deb ... Unpacking python3-pytest (8.3.5-1) ... Selecting previously unselected package python3-pytest-xdist. Preparing to unpack .../205-python3-pytest-xdist_3.6.1-1_all.deb ... Unpacking python3-pytest-xdist (3.6.1-1) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../206-python3-pytz_2025.1-3_all.deb ... Unpacking python3-pytz (2025.1-3) ... Selecting previously unselected package python3-setuptools-scm. Preparing to unpack .../207-python3-setuptools-scm_8.2.0-1_all.deb ... Unpacking python3-setuptools-scm (8.2.0-1) ... Selecting previously unselected package python3-snowballstemmer. Preparing to unpack .../208-python3-snowballstemmer_2.2.0-4_all.deb ... Unpacking python3-snowballstemmer (2.2.0-4) ... Selecting previously unselected package sphinx-common. Preparing to unpack .../209-sphinx-common_8.1.3-5_all.deb ... Unpacking sphinx-common (8.1.3-5) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../210-python3-sphinx_8.1.3-5_all.deb ... Unpacking python3-sphinx (8.1.3-5) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../211-python3-yaml_6.0.2-1+b2_arm64.deb ... Unpacking python3-yaml (6.0.2-1+b2) ... Selecting previously unselected package python3-sphinx-autoapi. Preparing to unpack .../212-python3-sphinx-autoapi_3.3.3-1_all.deb ... Unpacking python3-sphinx-autoapi (3.3.3-1) ... Selecting previously unselected package python3-sphinx-autodoc-typehints. Preparing to unpack .../213-python3-sphinx-autodoc-typehints_2.3.0-2_all.deb ... Unpacking python3-sphinx-autodoc-typehints (2.3.0-2) ... Selecting previously unselected package python3-sphinxcontrib.autoprogram. Preparing to unpack .../214-python3-sphinxcontrib.autoprogram_0.1.9-1_all.deb ... Unpacking python3-sphinxcontrib.autoprogram (0.1.9-1) ... Selecting previously unselected package python3-stubserver. Preparing to unpack .../215-python3-stubserver_1.1-4_all.deb ... Unpacking python3-stubserver (1.1-4) ... Selecting previously unselected package python3-tz. Preparing to unpack .../216-python3-tz_2025.1-3_all.deb ... Unpacking python3-tz (2025.1-3) ... Selecting previously unselected package python3-wdlparse. Preparing to unpack .../217-python3-wdlparse_0.1.0-3_all.deb ... Unpacking python3-wdlparse (0.1.0-3) ... Setting up libip4tc2:arm64 (1.8.11-2) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libgraphite2-3:arm64 (1.3.14-2+b1) ... Setting up libpixman-1-0:arm64 (0.44.0-3) ... Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... Setting up libaom3:arm64 (3.12.0-1) ... Setting up libxau6:arm64 (1:1.0.11-1) ... Setting up libxdmcp6:arm64 (1:1.1.5-1) ... Setting up libxcb1:arm64 (1.17.0-2+b1) ... Setting up fonts-lato (2.015-1) ... Setting up liblerc4:arm64 (4.0.0+ds-5) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libgpg-error0:arm64 (1.51-3) ... Setting up libdatrie1:arm64 (0.2.13-3+b1) ... Setting up libmagic-mgc (1:5.46-3) ... Setting up libxcb-render0:arm64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:arm64 (0.2.5-2) ... Setting up libip6tc2:arm64 (1.8.11-2) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up liblab-gamut1:arm64 (2.42.4-3) ... Setting up libmagic1t64:arm64 (1:5.46-3) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:arm64 (1.23-1+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libgcrypt20:arm64 (1.11.0-7) ... Setting up libxcb-shm0:arm64 (1.17.0-2+b1) ... Setting up file (1:5.46-3) ... Setting up libabsl20240722:arm64 (20240722.0-1.5) ... Setting up libjbig0:arm64 (2.1-6.1+b2) ... Setting up runc (1.1.15+ds1-2+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up python-babel-localedata (2.17.0-1) ... Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Mar 22 00:13:45 UTC 2025. Universal Time is now: Sat Mar 22 00:13:45 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-3.1) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... Setting up libpathplan4:arm64 (2.42.4-3) ... Setting up libann0 (1.1.2+doc-9+b2) ... Setting up libfribidi0:arm64 (1.0.16-1) ... Setting up libimagequant0:arm64 (2.18.0-1+b2) ... Setting up libunistring5:arm64 (1.3-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:arm64 (1.6.47-1.1) ... Setting up libmnl0:arm64 (1.0.5-3) ... Setting up tini (0.19.0-1+b1) ... Setting up autopoint (0.23.1-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgav1-1:arm64 (0.19.0-3+b1) ... Setting up libxtables12:arm64 (1.8.11-2) ... Setting up libltdl7:arm64 (2.5.4-4) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:arm64 (1.5.0-0.1) ... Setting up libffi8:arm64 (3.4.7-1) ... Setting up dwz (0.15-1+b1) ... Setting up libdav1d7:arm64 (1.5.1-1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:arm64 (4.5.1+git230720-5) ... Setting up libnfnetlink0:arm64 (1.0.2-3) ... Setting up librav1e0.7:arm64 (0.7.1-9+b1) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libjson-perl (4.10000-1) ... Setting up libx11-6:arm64 (2:1.8.12-1) ... Setting up libthai-data (0.1.29-2) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31) ... Setting up libcdt5:arm64 (2.42.4-3) ... Setting up libcgraph6:arm64 (2.42.4-3) ... Setting up libicu76:arm64 (76.1-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libde265-0:arm64 (1.0.15-1+b3) ... Setting up containerd (1.7.24~ds1-4+b2) ... Setting up openssl (3.4.1-1) ... Setting up libyuv0:arm64 (0.0.1904.20250204-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.3+b1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.0.2+dfsg-2) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libpopt0:arm64 (1.19+dfsg-2) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up libice6:arm64 (2:1.1.1-1) ... Setting up libavif16:arm64 (1.2.1-1) ... Setting up gettext (0.23.1-1) ... Setting up libxpm4:arm64 (1:3.5.17-1+b3) ... Setting up libxrender1:arm64 (1:0.9.10-1.1+b4) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.2) ... Setting up libxext6:arm64 (2:1.3.4-1+b3) ... Setting up libnftnl11:arm64 (1.2.8-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up python3.13-doc (3.13.2-2) ... Setting up libthai0:arm64 (0.1.29-2+b1) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libglib2.0-0t64:arm64 (2.84.0-2) ... No schema files found: doing nothing. Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ... Setting up libjs-sphinxdoc (8.1.3-5) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up libgvpr2:arm64 (2.42.4-3) ... Setting up libnetfilter-conntrack3:arm64 (1.1.0-1) ... Setting up groff-base (1.23.0-7) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:arm64 (1.1.35-1.2) ... Setting up libharfbuzz0b:arm64 (10.2.0-1+b1) ... Setting up libgts-0.7-5t64:arm64 (0.7.6+darcs121130-5.2+b1) ... Setting up libfontconfig1:arm64 (2.15.0-2.2) ... Setting up libsm6:arm64 (2:1.2.4-1) ... Setting up libpython3.13-stdlib:arm64 (3.13.2-2) ... Setting up python3-doc (3.13.2-2) ... Setting up rsync (3.4.1+ds1-3) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libpython3-stdlib:arm64 (3.13.2-2) ... Setting up fontconfig (2.15.0-2.2) ... Regenerating fonts cache... done. Setting up cwltool-doc (3.1.20250110105449-3) ... Setting up python3.13 (3.13.2-2) ... Setting up iptables (1.8.11-2) ... update-alternatives: using /usr/sbin/iptables-legacy to provide /usr/sbin/iptables (iptables) in auto mode update-alternatives: using /usr/sbin/ip6tables-legacy to provide /usr/sbin/ip6tables (ip6tables) in auto mode update-alternatives: using /usr/sbin/iptables-nft to provide /usr/sbin/iptables (iptables) in auto mode update-alternatives: using /usr/sbin/ip6tables-nft to provide /usr/sbin/ip6tables (ip6tables) in auto mode update-alternatives: using /usr/sbin/arptables-nft to provide /usr/sbin/arptables (arptables) in auto mode update-alternatives: using /usr/sbin/ebtables-nft to provide /usr/sbin/ebtables (ebtables) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:arm64 (1.56.3-1) ... Setting up python3 (3.13.2-2) ... Setting up docker.io (26.1.5+dfsg1-9+b1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (2.1.5-1+b4) ... Setting up python3-wheel (0.45.1-1) ... Setting up libcairo2:arm64 (1.18.4-1+b1) ... Setting up python3-psutil (7.0.0-1) ... Setting up python3-prefixed (0.7.0-1) ... Setting up python3-stubserver (1.1-4) ... Setting up python3-six (1.17.0-1) ... Setting up python3-roman (5.0-1) ... Setting up python3-jinja2 (3.1.5-2) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up python3-packaging (24.2-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-wcwidth (0.2.13+dfsg1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-humanfriendly (10.0-6) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up python3-spython (0.3.13-2) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-jmespath (1.0.1-1) ... Setting up python3-dill (0.3.9-1) ... Setting up libraqm0:arm64 (0.10.2-1) ... Setting up python3-mdurl (0.1.2-1) ... Setting up sphinx-common (8.1.3-5) ... Setting up libxt6t64:arm64 (1:1.2.1-1.2+b2) ... Setting up python3-idna (3.10-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.3.0-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-pubsub (4.0.3-7) ... Setting up python3-astroid (3.3.8-2) ... Setting up python3-lxml:arm64 (5.3.1-1+b1) ... Setting up python3-rdflib (7.1.1-2) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-msgpack (1.0.3-3+b5) ... Setting up libpangoft2-1.0-0:arm64 (1.56.3-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-argcomplete (3.5.3-1) ... Setting up python3-execnet (2.1.1-1) ... Setting up python3-coloredlogs (15.0.1-1) ... Setting up python3-mistune (3.0.2-2) ... Setting up libpangocairo-1.0-0:arm64 (1.56.3-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up dh-python (6.20250308) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up python3-configargparse (1.7-2) ... Setting up python3-arcp (0.2.1-7) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-antlr4 (4.9.2-1) ... Setting up python3-filelock (3.17.0-1) ... Setting up libxmu6:arm64 (2:1.1.3-3+b4) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-babel (2.17.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-rich (13.9.4-1) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up pybuild-plugin-pyproject (6.20250308) ... Setting up python3-charset-normalizer (3.4.1-1+b1) ... Setting up python3-pytest (8.3.5-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-mypy-extensions (1.0.0-1) ... Setting up python3-blessed (1.20.0-2) ... Setting up python3-typeguard (4.4.2-1) ... Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Setting up python3-all (3.13.2-2) ... Setting up python3-yaml (6.0.2-1+b2) ... Setting up debhelper (13.24.1) ... Setting up python3-pytz (2025.1-3) ... Setting up libxaw7:arm64 (2:1.0.16-1) ... Setting up python3-tz (2025.1-3) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-enlighten (1.11.2-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-requests (2.32.3+dfsg-4) ... Setting up python3-ruamel.yaml (0.18.10+ds-1) ... Setting up python3-rich-argparse (1.6.0-2) ... Setting up python3-cachecontrol (0.14.2-1) ... Setting up python3-wdlparse (0.1.0-3) ... Setting up python3-pkg-resources (75.8.0-1) ... Setting up python3-setuptools (75.8.0-1) ... Setting up python3-pytest-xdist (3.6.1-1) ... Setting up python3-docker (7.1.0-2) ... Setting up python3-schema-salad (8.8.20241206093842-2+b1) ... Setting up python3-networkx (3.2.1-5) ... Setting up python3-setuptools-scm (8.2.0-1) ... Setting up python3-prov (2.0.1-1) ... Setting up cwl-upgrader (1.2.12-1) ... Setting up python3-botocore (1.37.9+repack-1) ... Setting up python3-s3transfer (0.11.2-2) ... Setting up python3-cwl-utils (0.37-1) ... Setting up cwl-utils (0.37-1) ... Setting up python3-boto3 (1.37.9-1) ... Setting up libheif-plugin-libde265:arm64 (1.19.7-1) ... Setting up libheif1:arm64 (1.19.7-1) ... Setting up libgd3:arm64 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-3) ... Setting up libheif-plugin-dav1d:arm64 (1.19.7-1) ... Setting up graphviz (2.42.4-3) ... Setting up python3-pydot (2.0.0-3) ... Setting up cwltool (3.1.20250110105449-3) ... Processing triggers for libc-bin (2.41-6) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-5) ... Setting up python3-sphinx-autodoc-typehints (2.3.0-2) ... Setting up python3-sphinx-autoapi (3.3.3-1) ... Setting up python3-sphinxcontrib.autoprogram (0.1.9-1) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/toil-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../toil_8.0.0-4_source.changes dpkg-buildpackage: info: source package toil dpkg-buildpackage: info: source version 8.0.0-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from toil-8.0.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/toil-8.0.0' rm -rf docs/_build find . -name "*.pyc" -delete make[1]: Leaving directory '/build/reproducible-path/toil-8.0.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil * Building wheel... running bdist_wheel running build running build_py creating build/lib/toil copying src/toil/version.py -> build/lib/toil copying src/toil/worker.py -> build/lib/toil copying src/toil/toilState.py -> build/lib/toil copying src/toil/statsAndLogging.py -> build/lib/toil copying src/toil/serviceManager.py -> build/lib/toil copying src/toil/resource.py -> build/lib/toil copying src/toil/realtimeLogger.py -> build/lib/toil copying src/toil/leader.py -> build/lib/toil copying src/toil/job.py -> build/lib/toil copying src/toil/exceptions.py -> build/lib/toil copying src/toil/deferred.py -> build/lib/toil copying src/toil/common.py -> build/lib/toil copying src/toil/bus.py -> build/lib/toil copying src/toil/__init__.py -> build/lib/toil creating build/lib/toil/wdl copying src/toil/wdl/wdltoil.py -> build/lib/toil/wdl copying src/toil/wdl/utils.py -> build/lib/toil/wdl copying src/toil/wdl/__init__.py -> build/lib/toil/wdl creating build/lib/toil/utils copying src/toil/utils/toilUpdateEC2Instances.py -> build/lib/toil/utils copying src/toil/utils/toilStatus.py -> build/lib/toil/utils copying src/toil/utils/toilStats.py -> build/lib/toil/utils copying src/toil/utils/toilSshCluster.py -> build/lib/toil/utils copying src/toil/utils/toilServer.py -> build/lib/toil/utils copying src/toil/utils/toilRsyncCluster.py -> build/lib/toil/utils copying src/toil/utils/toilMain.py -> build/lib/toil/utils copying src/toil/utils/toilLaunchCluster.py -> build/lib/toil/utils copying src/toil/utils/toilKill.py -> build/lib/toil/utils copying src/toil/utils/toilDestroyCluster.py -> build/lib/toil/utils copying src/toil/utils/toilDebugJob.py -> build/lib/toil/utils copying src/toil/utils/toilDebugFile.py -> build/lib/toil/utils copying src/toil/utils/toilConfig.py -> build/lib/toil/utils copying src/toil/utils/toilClean.py -> build/lib/toil/utils copying src/toil/utils/__init__.py -> build/lib/toil/utils creating build/lib/toil/test copying src/toil/test/__init__.py -> build/lib/toil/test creating build/lib/toil/server copying src/toil/server/wsgi_app.py -> build/lib/toil/server copying src/toil/server/utils.py -> build/lib/toil/server copying src/toil/server/celery_app.py -> build/lib/toil/server copying src/toil/server/app.py -> build/lib/toil/server copying src/toil/server/__init__.py -> build/lib/toil/server creating build/lib/toil/provisioners copying src/toil/provisioners/node.py -> build/lib/toil/provisioners copying src/toil/provisioners/gceProvisioner.py -> build/lib/toil/provisioners copying src/toil/provisioners/clusterScaler.py -> build/lib/toil/provisioners copying src/toil/provisioners/abstractProvisioner.py -> build/lib/toil/provisioners copying src/toil/provisioners/__init__.py -> build/lib/toil/provisioners creating build/lib/toil/options copying src/toil/options/wdl.py -> build/lib/toil/options copying src/toil/options/runner.py -> build/lib/toil/options copying src/toil/options/cwl.py -> build/lib/toil/options copying src/toil/options/common.py -> build/lib/toil/options copying src/toil/options/__init__.py -> build/lib/toil/options creating build/lib/toil/lib copying src/toil/lib/throttle.py -> build/lib/toil/lib copying src/toil/lib/threading.py -> build/lib/toil/lib copying src/toil/lib/retry.py -> build/lib/toil/lib copying src/toil/lib/resources.py -> build/lib/toil/lib copying src/toil/lib/objects.py -> build/lib/toil/lib copying src/toil/lib/misc.py -> build/lib/toil/lib copying src/toil/lib/memoize.py -> build/lib/toil/lib copying src/toil/lib/iterables.py -> build/lib/toil/lib copying src/toil/lib/io.py -> build/lib/toil/lib copying src/toil/lib/integration.py -> build/lib/toil/lib copying src/toil/lib/humanize.py -> build/lib/toil/lib copying src/toil/lib/generatedEC2Lists.py -> build/lib/toil/lib copying src/toil/lib/ftp_utils.py -> build/lib/toil/lib copying src/toil/lib/expando.py -> build/lib/toil/lib copying src/toil/lib/exceptions.py -> build/lib/toil/lib copying src/toil/lib/ec2nodes.py -> build/lib/toil/lib copying src/toil/lib/ec2.py -> build/lib/toil/lib copying src/toil/lib/docker.py -> build/lib/toil/lib copying src/toil/lib/conversions.py -> build/lib/toil/lib copying src/toil/lib/compatibility.py -> build/lib/toil/lib copying src/toil/lib/bioio.py -> build/lib/toil/lib copying src/toil/lib/accelerators.py -> build/lib/toil/lib copying src/toil/lib/__init__.py -> build/lib/toil/lib creating build/lib/toil/jobStores copying src/toil/jobStores/fileJobStore.py -> build/lib/toil/jobStores copying src/toil/jobStores/utils.py -> build/lib/toil/jobStores copying src/toil/jobStores/googleJobStore.py -> build/lib/toil/jobStores copying src/toil/jobStores/conftest.py -> build/lib/toil/jobStores copying src/toil/jobStores/abstractJobStore.py -> build/lib/toil/jobStores copying src/toil/jobStores/__init__.py -> build/lib/toil/jobStores creating build/lib/toil/fileStores copying src/toil/fileStores/nonCachingFileStore.py -> build/lib/toil/fileStores copying src/toil/fileStores/cachingFileStore.py -> build/lib/toil/fileStores copying src/toil/fileStores/abstractFileStore.py -> build/lib/toil/fileStores copying src/toil/fileStores/__init__.py -> build/lib/toil/fileStores creating build/lib/toil/cwl copying src/toil/cwl/utils.py -> build/lib/toil/cwl copying src/toil/cwl/cwltoil.py -> build/lib/toil/cwl copying src/toil/cwl/conftest.py -> build/lib/toil/cwl copying src/toil/cwl/__init__.py -> build/lib/toil/cwl creating build/lib/toil/batchSystems copying src/toil/batchSystems/torque.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/slurm.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/singleMachine.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/registry.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/options.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/lsfHelper.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/lsf.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/local_support.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/kubernetes.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/htcondor.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/gridengine.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/contained_executor.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/cleanup_support.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/awsBatch.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/abstractBatchSystem.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/__init__.py -> build/lib/toil/batchSystems creating build/lib/toil/test/wdl copying src/toil/test/wdl/wdltoil_test.py -> build/lib/toil/test/wdl copying src/toil/test/wdl/wdltoil_test_kubernetes.py -> build/lib/toil/test/wdl copying src/toil/test/wdl/__init__.py -> build/lib/toil/test/wdl creating build/lib/toil/test/utils copying src/toil/test/utils/utilsTest.py -> build/lib/toil/test/utils copying src/toil/test/utils/toilKillTest.py -> build/lib/toil/test/utils copying src/toil/test/utils/toilDebugTest.py -> build/lib/toil/test/utils copying src/toil/test/utils/__init__.py -> build/lib/toil/test/utils creating build/lib/toil/test/src copying src/toil/test/src/resourceTest.py -> build/lib/toil/test/src copying src/toil/test/src/workerTest.py -> build/lib/toil/test/src copying src/toil/test/src/userDefinedJobArgTypeTest.py -> build/lib/toil/test/src copying src/toil/test/src/toilContextManagerTest.py -> build/lib/toil/test/src copying src/toil/test/src/threadingTest.py -> build/lib/toil/test/src copying src/toil/test/src/systemTest.py -> build/lib/toil/test/src copying src/toil/test/src/retainTempDirTest.py -> build/lib/toil/test/src copying src/toil/test/src/resumabilityTest.py -> build/lib/toil/test/src copying src/toil/test/src/restartDAGTest.py -> build/lib/toil/test/src copying src/toil/test/src/regularLogTest.py -> build/lib/toil/test/src copying src/toil/test/src/realtimeLoggerTest.py -> build/lib/toil/test/src copying src/toil/test/src/promisesTest.py -> build/lib/toil/test/src copying src/toil/test/src/promisedRequirementTest.py -> build/lib/toil/test/src copying src/toil/test/src/miscTests.py -> build/lib/toil/test/src copying src/toil/test/src/jobTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobServiceTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobFileStoreTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobEncapsulationTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobDescriptionTest.py -> build/lib/toil/test/src copying src/toil/test/src/importExportFileTest.py -> build/lib/toil/test/src copying src/toil/test/src/helloWorldTest.py -> build/lib/toil/test/src copying src/toil/test/src/fileStoreTest.py -> build/lib/toil/test/src copying src/toil/test/src/environmentTest.py -> build/lib/toil/test/src copying src/toil/test/src/dockerCheckTest.py -> build/lib/toil/test/src copying src/toil/test/src/deferredFunctionTest.py -> build/lib/toil/test/src copying src/toil/test/src/checkpointTest.py -> build/lib/toil/test/src copying src/toil/test/src/busTest.py -> build/lib/toil/test/src copying src/toil/test/src/autoDeploymentTest.py -> build/lib/toil/test/src copying src/toil/test/src/__init__.py -> build/lib/toil/test/src creating build/lib/toil/test/sort copying src/toil/test/sort/sortTest.py -> build/lib/toil/test/sort copying src/toil/test/sort/sort.py -> build/lib/toil/test/sort copying src/toil/test/sort/restart_sort.py -> build/lib/toil/test/sort copying src/toil/test/sort/__init__.py -> build/lib/toil/test/sort creating build/lib/toil/test/server copying src/toil/test/server/serverTest.py -> build/lib/toil/test/server copying src/toil/test/server/__init__.py -> build/lib/toil/test/server creating build/lib/toil/test/provisioners copying src/toil/test/provisioners/gceProvisionerTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/clusterTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/restartScript.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/provisionerTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/clusterScalerTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/__init__.py -> build/lib/toil/test/provisioners creating build/lib/toil/test/options copying src/toil/test/options/options.py -> build/lib/toil/test/options copying src/toil/test/options/__init__.py -> build/lib/toil/test/options creating build/lib/toil/test/mesos copying src/toil/test/mesos/stress.py -> build/lib/toil/test/mesos copying src/toil/test/mesos/helloWorld.py -> build/lib/toil/test/mesos copying src/toil/test/mesos/__init__.py -> build/lib/toil/test/mesos copying src/toil/test/mesos/MesosDataStructuresTest.py -> build/lib/toil/test/mesos creating build/lib/toil/test/lib copying src/toil/test/lib/test_misc.py -> build/lib/toil/test/lib copying src/toil/test/lib/test_integration.py -> build/lib/toil/test/lib copying src/toil/test/lib/test_ec2.py -> build/lib/toil/test/lib copying src/toil/test/lib/test_conversions.py -> build/lib/toil/test/lib copying src/toil/test/lib/dockerTest.py -> build/lib/toil/test/lib copying src/toil/test/lib/__init__.py -> build/lib/toil/test/lib creating build/lib/toil/test/jobStores copying src/toil/test/jobStores/jobStoreTest.py -> build/lib/toil/test/jobStores copying src/toil/test/jobStores/__init__.py -> build/lib/toil/test/jobStores creating build/lib/toil/test/docs copying src/toil/test/docs/scriptsTest.py -> build/lib/toil/test/docs copying src/toil/test/docs/__init__.py -> build/lib/toil/test/docs creating build/lib/toil/test/cwl copying src/toil/test/cwl/cwlTest.py -> build/lib/toil/test/cwl copying src/toil/test/cwl/conftest.py -> build/lib/toil/test/cwl copying src/toil/test/cwl/__init__.py -> build/lib/toil/test/cwl creating build/lib/toil/test/cactus copying src/toil/test/cactus/test_cactus_integration.py -> build/lib/toil/test/cactus copying src/toil/test/cactus/__init__.py -> build/lib/toil/test/cactus creating build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/test_slurm.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/test_lsf_helper.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/test_gridengine.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/batch_system_plugin_test.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/batchSystemTest.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/__init__.py -> build/lib/toil/test/batchSystems creating build/lib/toil/test/provisioners/aws copying src/toil/test/provisioners/aws/awsProvisionerTest.py -> build/lib/toil/test/provisioners/aws copying src/toil/test/provisioners/aws/__init__.py -> build/lib/toil/test/provisioners/aws creating build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/test_utils.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/test_s3.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/test_iam.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/__init__.py -> build/lib/toil/test/lib/aws creating build/lib/toil/server/wes copying src/toil/server/wes/toil_backend.py -> build/lib/toil/server/wes copying src/toil/server/wes/tasks.py -> build/lib/toil/server/wes copying src/toil/server/wes/amazon_wes_utils.py -> build/lib/toil/server/wes copying src/toil/server/wes/abstract_backend.py -> build/lib/toil/server/wes copying src/toil/server/wes/__init__.py -> build/lib/toil/server/wes creating build/lib/toil/server/cli copying src/toil/server/cli/wes_cwl_runner.py -> build/lib/toil/server/cli copying src/toil/server/cli/__init__.py -> build/lib/toil/server/cli creating build/lib/toil/server/api_spec copying src/toil/server/api_spec/__init__.py -> build/lib/toil/server/api_spec creating build/lib/toil/provisioners/aws copying src/toil/provisioners/aws/awsProvisioner.py -> build/lib/toil/provisioners/aws copying src/toil/provisioners/aws/__init__.py -> build/lib/toil/provisioners/aws creating build/lib/toil/lib/encryption copying src/toil/lib/encryption/conftest.py -> build/lib/toil/lib/encryption copying src/toil/lib/encryption/_nacl.py -> build/lib/toil/lib/encryption copying src/toil/lib/encryption/_dummy.py -> build/lib/toil/lib/encryption copying src/toil/lib/encryption/__init__.py -> build/lib/toil/lib/encryption creating build/lib/toil/lib/aws copying src/toil/lib/aws/utils.py -> build/lib/toil/lib/aws copying src/toil/lib/aws/session.py -> build/lib/toil/lib/aws copying src/toil/lib/aws/s3.py -> build/lib/toil/lib/aws copying src/toil/lib/aws/iam.py -> build/lib/toil/lib/aws copying src/toil/lib/aws/ami.py -> build/lib/toil/lib/aws copying src/toil/lib/aws/__init__.py -> build/lib/toil/lib/aws creating build/lib/toil/jobStores/aws copying src/toil/jobStores/aws/utils.py -> build/lib/toil/jobStores/aws copying src/toil/jobStores/aws/jobStore.py -> build/lib/toil/jobStores/aws copying src/toil/jobStores/aws/__init__.py -> build/lib/toil/jobStores/aws creating build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/executor.py -> build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/conftest.py -> build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/batchSystem.py -> build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/__init__.py -> build/lib/toil/batchSystems/mesos creating build/lib/toil/batchSystems/mesos/test copying src/toil/batchSystems/mesos/test/__init__.py -> build/lib/toil/batchSystems/mesos/test running egg_info creating src/toil.egg-info writing src/toil.egg-info/PKG-INFO writing dependency_links to src/toil.egg-info/dependency_links.txt writing entry points to src/toil.egg-info/entry_points.txt writing requirements to src/toil.egg-info/requires.txt writing top-level names to src/toil.egg-info/top_level.txt writing manifest file 'src/toil.egg-info/SOURCES.txt' reading manifest file 'src/toil.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/toil.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.cwl.directory.directory' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.cwl.directory.directory' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.cwl.directory.directory' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.cwl.directory.directory' to be distributed and are already explicitly excluding 'toil.test.cwl.directory.directory' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.cwl.mock_mpi' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.cwl.mock_mpi' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.cwl.mock_mpi' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.cwl.mock_mpi' to be distributed and are already explicitly excluding 'toil.test.cwl.mock_mpi' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.docs.scripts' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.docs.scripts' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.docs.scripts' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.docs.scripts' to be distributed and are already explicitly excluding 'toil.test.docs.scripts' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.docs.scripts.stagingExampleFiles' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.docs.scripts.stagingExampleFiles' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.docs.scripts.stagingExampleFiles' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.docs.scripts.stagingExampleFiles' to be distributed and are already explicitly excluding 'toil.test.docs.scripts.stagingExampleFiles' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.utils.ABCWorkflowDebug' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.utils.ABCWorkflowDebug' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.utils.ABCWorkflowDebug' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.utils.ABCWorkflowDebug' to be distributed and are already explicitly excluding 'toil.test.utils.ABCWorkflowDebug' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.testfiles' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'toil.test.wdl.testfiles' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'toil.test.wdl.testfiles' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'toil.test.wdl.testfiles' to be distributed and are already explicitly excluding 'toil.test.wdl.testfiles' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_boolean.txt -> build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_float.txt -> build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_int.txt -> build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_lines.txt -> build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_map.txt -> build/lib/toil/test/wdl/testfiles copying src/toil/test/wdl/testfiles/test_string.txt -> build/lib/toil/test/wdl/testfiles creating build/lib/toil/test/utils/ABCWorkflowDebug copying src/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/lib/toil/test/utils/ABCWorkflowDebug copying src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/lib/toil/test/utils/ABCWorkflowDebug copying src/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/lib/toil/test/utils/ABCWorkflowDebug copying src/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/lib/toil/test/utils/ABCWorkflowDebug copying src/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/lib/toil/test/utils/ABCWorkflowDebug creating build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/example_alwaysfail.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/example_cachingbenchmark.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_arguments.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_debugging.patch -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_docker.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_dynamic.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_encapsulation.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_helloworld.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_managing.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_managing2.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_promises.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_promises2.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_quickstart.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_requirements.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_services.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_staging.py -> build/lib/toil/test/docs/scripts copying src/toil/test/docs/scripts/tutorial_stats.py -> build/lib/toil/test/docs/scripts creating build/lib/toil/test/docs/scripts/stagingExampleFiles copying src/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles copying src/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles copying src/toil/test/cwl/alwaysfails.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/colon_test_output.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/colon_test_output_job.yaml -> build/lib/toil/test/cwl copying src/toil/test/cwl/conditional_wf.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/conditional_wf.yaml -> build/lib/toil/test/cwl copying src/toil/test/cwl/directory_from_directory.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/download.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/download_directory.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/download_subdirectory.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/echo-stderr.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/echo-stdout-log-dir.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/echo.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/echo_string.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/file_from_directory.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/glob_dir.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/load_contents.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/measure_default_memory.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/mpi_simple.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/not_run_required_input.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/nvidia_smi.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/preemptible.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/preemptible_expression.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/revsort.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/revsort2.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/revtool.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/revtool2.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/s3_secondary_file.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/seqtk_seq.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/sorttool.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/stream.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/test_filename_conflict_detection.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/whale.txt -> build/lib/toil/test/cwl creating build/lib/toil/test/cwl/directory/directory copying src/toil/test/cwl/directory/directory/file.txt -> build/lib/toil/test/cwl/directory/directory creating build/lib/toil/test/cwl/mock_mpi copying src/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/lib/toil/test/cwl/mock_mpi copying src/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/lib/toil/server/api_spec installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/toil creating build/bdist.linux-aarch64/wheel/toil/batchSystems creating build/bdist.linux-aarch64/wheel/toil/batchSystems/mesos creating build/bdist.linux-aarch64/wheel/toil/batchSystems/mesos/test copying build/lib/toil/batchSystems/mesos/test/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems/mesos/test copying build/lib/toil/batchSystems/mesos/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems/mesos copying build/lib/toil/batchSystems/mesos/batchSystem.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems/mesos copying build/lib/toil/batchSystems/mesos/conftest.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems/mesos copying build/lib/toil/batchSystems/mesos/executor.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems/mesos copying build/lib/toil/batchSystems/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/abstractBatchSystem.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/awsBatch.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/cleanup_support.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/contained_executor.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/gridengine.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/htcondor.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/kubernetes.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/local_support.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/lsf.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/lsfHelper.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/options.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/registry.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/singleMachine.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/slurm.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/torque.py -> build/bdist.linux-aarch64/wheel/./toil/batchSystems creating build/bdist.linux-aarch64/wheel/toil/cwl copying build/lib/toil/cwl/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/cwl copying build/lib/toil/cwl/conftest.py -> build/bdist.linux-aarch64/wheel/./toil/cwl copying build/lib/toil/cwl/cwltoil.py -> build/bdist.linux-aarch64/wheel/./toil/cwl copying build/lib/toil/cwl/utils.py -> build/bdist.linux-aarch64/wheel/./toil/cwl creating build/bdist.linux-aarch64/wheel/toil/fileStores copying build/lib/toil/fileStores/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/fileStores copying build/lib/toil/fileStores/abstractFileStore.py -> build/bdist.linux-aarch64/wheel/./toil/fileStores copying build/lib/toil/fileStores/cachingFileStore.py -> build/bdist.linux-aarch64/wheel/./toil/fileStores copying build/lib/toil/fileStores/nonCachingFileStore.py -> build/bdist.linux-aarch64/wheel/./toil/fileStores creating build/bdist.linux-aarch64/wheel/toil/jobStores creating build/bdist.linux-aarch64/wheel/toil/jobStores/aws copying build/lib/toil/jobStores/aws/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores/aws copying build/lib/toil/jobStores/aws/jobStore.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores/aws copying build/lib/toil/jobStores/aws/utils.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores/aws copying build/lib/toil/jobStores/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores copying build/lib/toil/jobStores/abstractJobStore.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores copying build/lib/toil/jobStores/conftest.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores copying build/lib/toil/jobStores/googleJobStore.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores copying build/lib/toil/jobStores/utils.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores copying build/lib/toil/jobStores/fileJobStore.py -> build/bdist.linux-aarch64/wheel/./toil/jobStores creating build/bdist.linux-aarch64/wheel/toil/lib creating build/bdist.linux-aarch64/wheel/toil/lib/aws copying build/lib/toil/lib/aws/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws copying build/lib/toil/lib/aws/ami.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws copying build/lib/toil/lib/aws/iam.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws copying build/lib/toil/lib/aws/s3.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws copying build/lib/toil/lib/aws/session.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws copying build/lib/toil/lib/aws/utils.py -> build/bdist.linux-aarch64/wheel/./toil/lib/aws creating build/bdist.linux-aarch64/wheel/toil/lib/encryption copying build/lib/toil/lib/encryption/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/lib/encryption copying build/lib/toil/lib/encryption/_dummy.py -> build/bdist.linux-aarch64/wheel/./toil/lib/encryption copying build/lib/toil/lib/encryption/_nacl.py -> build/bdist.linux-aarch64/wheel/./toil/lib/encryption copying build/lib/toil/lib/encryption/conftest.py -> build/bdist.linux-aarch64/wheel/./toil/lib/encryption copying build/lib/toil/lib/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/accelerators.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/bioio.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/compatibility.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/conversions.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/docker.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/ec2.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/ec2nodes.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/exceptions.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/expando.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/ftp_utils.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/generatedEC2Lists.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/humanize.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/integration.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/io.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/iterables.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/memoize.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/misc.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/objects.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/resources.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/retry.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/threading.py -> build/bdist.linux-aarch64/wheel/./toil/lib copying build/lib/toil/lib/throttle.py -> build/bdist.linux-aarch64/wheel/./toil/lib creating build/bdist.linux-aarch64/wheel/toil/options copying build/lib/toil/options/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/options copying build/lib/toil/options/common.py -> build/bdist.linux-aarch64/wheel/./toil/options copying build/lib/toil/options/cwl.py -> build/bdist.linux-aarch64/wheel/./toil/options copying build/lib/toil/options/runner.py -> build/bdist.linux-aarch64/wheel/./toil/options copying build/lib/toil/options/wdl.py -> build/bdist.linux-aarch64/wheel/./toil/options creating build/bdist.linux-aarch64/wheel/toil/provisioners creating build/bdist.linux-aarch64/wheel/toil/provisioners/aws copying build/lib/toil/provisioners/aws/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners/aws copying build/lib/toil/provisioners/aws/awsProvisioner.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners/aws copying build/lib/toil/provisioners/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners copying build/lib/toil/provisioners/abstractProvisioner.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners copying build/lib/toil/provisioners/clusterScaler.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners copying build/lib/toil/provisioners/gceProvisioner.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners copying build/lib/toil/provisioners/node.py -> build/bdist.linux-aarch64/wheel/./toil/provisioners creating build/bdist.linux-aarch64/wheel/toil/server creating build/bdist.linux-aarch64/wheel/toil/server/api_spec copying build/lib/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/bdist.linux-aarch64/wheel/./toil/server/api_spec copying build/lib/toil/server/api_spec/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/server/api_spec creating build/bdist.linux-aarch64/wheel/toil/server/cli copying build/lib/toil/server/cli/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/server/cli copying build/lib/toil/server/cli/wes_cwl_runner.py -> build/bdist.linux-aarch64/wheel/./toil/server/cli creating build/bdist.linux-aarch64/wheel/toil/server/wes copying build/lib/toil/server/wes/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/server/wes copying build/lib/toil/server/wes/abstract_backend.py -> build/bdist.linux-aarch64/wheel/./toil/server/wes copying build/lib/toil/server/wes/amazon_wes_utils.py -> build/bdist.linux-aarch64/wheel/./toil/server/wes copying build/lib/toil/server/wes/tasks.py -> build/bdist.linux-aarch64/wheel/./toil/server/wes copying build/lib/toil/server/wes/toil_backend.py -> build/bdist.linux-aarch64/wheel/./toil/server/wes copying build/lib/toil/server/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/server copying build/lib/toil/server/app.py -> build/bdist.linux-aarch64/wheel/./toil/server copying build/lib/toil/server/celery_app.py -> build/bdist.linux-aarch64/wheel/./toil/server copying build/lib/toil/server/utils.py -> build/bdist.linux-aarch64/wheel/./toil/server copying build/lib/toil/server/wsgi_app.py -> build/bdist.linux-aarch64/wheel/./toil/server creating build/bdist.linux-aarch64/wheel/toil/test creating build/bdist.linux-aarch64/wheel/toil/test/batchSystems copying build/lib/toil/test/batchSystems/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems copying build/lib/toil/test/batchSystems/batchSystemTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems copying build/lib/toil/test/batchSystems/batch_system_plugin_test.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems copying build/lib/toil/test/batchSystems/test_gridengine.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems copying build/lib/toil/test/batchSystems/test_lsf_helper.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems copying build/lib/toil/test/batchSystems/test_slurm.py -> build/bdist.linux-aarch64/wheel/./toil/test/batchSystems creating build/bdist.linux-aarch64/wheel/toil/test/cactus copying build/lib/toil/test/cactus/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/cactus copying build/lib/toil/test/cactus/test_cactus_integration.py -> build/bdist.linux-aarch64/wheel/./toil/test/cactus creating build/bdist.linux-aarch64/wheel/toil/test/cwl creating build/bdist.linux-aarch64/wheel/toil/test/cwl/mock_mpi copying build/lib/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/bdist.linux-aarch64/wheel/./toil/test/cwl/mock_mpi creating build/bdist.linux-aarch64/wheel/toil/test/cwl/directory creating build/bdist.linux-aarch64/wheel/toil/test/cwl/directory/directory copying build/lib/toil/test/cwl/directory/directory/file.txt -> build/bdist.linux-aarch64/wheel/./toil/test/cwl/directory/directory copying build/lib/toil/test/cwl/whale.txt -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/test_filename_conflict_detection.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/stream.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/sorttool.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/seqtk_seq.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/s3_secondary_file.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/revtool2.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/revtool.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/revsort2.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/revsort.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/preemptible_expression.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/preemptible.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/nvidia_smi.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/not_run_required_input.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/mpi_simple.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/measure_default_memory.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/load_contents.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/glob_dir.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/file_from_directory.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/echo_string.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/echo.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/echo-stdout-log-dir.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/echo-stderr.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/download_subdirectory.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/download_directory.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/download.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/directory_from_directory.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/conditional_wf.yaml -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/conditional_wf.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/colon_test_output_job.yaml -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/colon_test_output.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/alwaysfails.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/conftest.py -> build/bdist.linux-aarch64/wheel/./toil/test/cwl copying build/lib/toil/test/cwl/cwlTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/cwl creating build/bdist.linux-aarch64/wheel/toil/test/docs creating build/bdist.linux-aarch64/wheel/toil/test/docs/scripts creating build/bdist.linux-aarch64/wheel/toil/test/docs/scripts/stagingExampleFiles copying build/lib/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts/stagingExampleFiles copying build/lib/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts/stagingExampleFiles copying build/lib/toil/test/docs/scripts/tutorial_stats.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_staging.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_services.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_requirements.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_quickstart.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_promises2.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_promises.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_managing2.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_managing.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_helloworld.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_encapsulation.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_dynamic.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_docker.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_debugging.patch -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_arguments.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/example_cachingbenchmark.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/example_alwaysfail.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs copying build/lib/toil/test/docs/scriptsTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/docs creating build/bdist.linux-aarch64/wheel/toil/test/jobStores copying build/lib/toil/test/jobStores/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/jobStores copying build/lib/toil/test/jobStores/jobStoreTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/jobStores creating build/bdist.linux-aarch64/wheel/toil/test/lib creating build/bdist.linux-aarch64/wheel/toil/test/lib/aws copying build/lib/toil/test/lib/aws/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/test_iam.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/test_s3.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/test_utils.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib copying build/lib/toil/test/lib/dockerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib copying build/lib/toil/test/lib/test_conversions.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib copying build/lib/toil/test/lib/test_ec2.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib copying build/lib/toil/test/lib/test_integration.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib copying build/lib/toil/test/lib/test_misc.py -> build/bdist.linux-aarch64/wheel/./toil/test/lib creating build/bdist.linux-aarch64/wheel/toil/test/mesos copying build/lib/toil/test/mesos/MesosDataStructuresTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/mesos copying build/lib/toil/test/mesos/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/mesos copying build/lib/toil/test/mesos/helloWorld.py -> build/bdist.linux-aarch64/wheel/./toil/test/mesos copying build/lib/toil/test/mesos/stress.py -> build/bdist.linux-aarch64/wheel/./toil/test/mesos creating build/bdist.linux-aarch64/wheel/toil/test/options copying build/lib/toil/test/options/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/options copying build/lib/toil/test/options/options.py -> build/bdist.linux-aarch64/wheel/./toil/test/options creating build/bdist.linux-aarch64/wheel/toil/test/provisioners creating build/bdist.linux-aarch64/wheel/toil/test/provisioners/aws copying build/lib/toil/test/provisioners/aws/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners/aws copying build/lib/toil/test/provisioners/aws/awsProvisionerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners/aws copying build/lib/toil/test/provisioners/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners copying build/lib/toil/test/provisioners/clusterScalerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners copying build/lib/toil/test/provisioners/provisionerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners copying build/lib/toil/test/provisioners/restartScript.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners copying build/lib/toil/test/provisioners/clusterTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners copying build/lib/toil/test/provisioners/gceProvisionerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/provisioners creating build/bdist.linux-aarch64/wheel/toil/test/server copying build/lib/toil/test/server/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/server copying build/lib/toil/test/server/serverTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/server creating build/bdist.linux-aarch64/wheel/toil/test/sort copying build/lib/toil/test/sort/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/sort copying build/lib/toil/test/sort/restart_sort.py -> build/bdist.linux-aarch64/wheel/./toil/test/sort copying build/lib/toil/test/sort/sort.py -> build/bdist.linux-aarch64/wheel/./toil/test/sort copying build/lib/toil/test/sort/sortTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/sort creating build/bdist.linux-aarch64/wheel/toil/test/src copying build/lib/toil/test/src/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/autoDeploymentTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/busTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/checkpointTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/deferredFunctionTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/dockerCheckTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/environmentTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/fileStoreTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/helloWorldTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/importExportFileTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/jobDescriptionTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/jobEncapsulationTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/jobFileStoreTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/jobServiceTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/jobTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/miscTests.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/promisedRequirementTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/promisesTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/realtimeLoggerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/regularLogTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/restartDAGTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/resumabilityTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/retainTempDirTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/systemTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/threadingTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/toilContextManagerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/userDefinedJobArgTypeTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/workerTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src copying build/lib/toil/test/src/resourceTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/src creating build/bdist.linux-aarch64/wheel/toil/test/utils creating build/bdist.linux-aarch64/wheel/toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/bdist.linux-aarch64/wheel/./toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/bdist.linux-aarch64/wheel/./toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/bdist.linux-aarch64/wheel/./toil/test/utils/ABCWorkflowDebug copying build/lib/toil/test/utils/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils copying build/lib/toil/test/utils/toilDebugTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils copying build/lib/toil/test/utils/toilKillTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils copying build/lib/toil/test/utils/utilsTest.py -> build/bdist.linux-aarch64/wheel/./toil/test/utils creating build/bdist.linux-aarch64/wheel/toil/test/wdl creating build/bdist.linux-aarch64/wheel/toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_string.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_map.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_lines.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_int.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_float.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_boolean.txt -> build/bdist.linux-aarch64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test/wdl copying build/lib/toil/test/wdl/wdltoil_test_kubernetes.py -> build/bdist.linux-aarch64/wheel/./toil/test/wdl copying build/lib/toil/test/wdl/wdltoil_test.py -> build/bdist.linux-aarch64/wheel/./toil/test/wdl copying build/lib/toil/test/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/test creating build/bdist.linux-aarch64/wheel/toil/utils copying build/lib/toil/utils/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilClean.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilConfig.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilDebugFile.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilDebugJob.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilDestroyCluster.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilKill.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilLaunchCluster.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilMain.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilRsyncCluster.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilServer.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilSshCluster.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilStats.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilStatus.py -> build/bdist.linux-aarch64/wheel/./toil/utils copying build/lib/toil/utils/toilUpdateEC2Instances.py -> build/bdist.linux-aarch64/wheel/./toil/utils creating build/bdist.linux-aarch64/wheel/toil/wdl copying build/lib/toil/wdl/__init__.py -> build/bdist.linux-aarch64/wheel/./toil/wdl copying build/lib/toil/wdl/utils.py -> build/bdist.linux-aarch64/wheel/./toil/wdl copying build/lib/toil/wdl/wdltoil.py -> build/bdist.linux-aarch64/wheel/./toil/wdl copying build/lib/toil/__init__.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/bus.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/common.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/deferred.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/exceptions.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/job.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/leader.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/realtimeLogger.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/resource.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/serviceManager.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/statsAndLogging.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/toilState.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/worker.py -> build/bdist.linux-aarch64/wheel/./toil copying build/lib/toil/version.py -> build/bdist.linux-aarch64/wheel/./toil running install_egg_info Copying src/toil.egg-info to build/bdist.linux-aarch64/wheel/./toil-8.0.0.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/toil-8.0.0.dist-info/WHEEL creating '/build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/.tmp-ss19uc7g/toil-8.0.0-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'toil/__init__.py' adding 'toil/bus.py' adding 'toil/common.py' adding 'toil/deferred.py' adding 'toil/exceptions.py' adding 'toil/job.py' adding 'toil/leader.py' adding 'toil/realtimeLogger.py' adding 'toil/resource.py' adding 'toil/serviceManager.py' adding 'toil/statsAndLogging.py' adding 'toil/toilState.py' adding 'toil/version.py' adding 'toil/worker.py' adding 'toil/batchSystems/__init__.py' adding 'toil/batchSystems/abstractBatchSystem.py' adding 'toil/batchSystems/abstractGridEngineBatchSystem.py' adding 'toil/batchSystems/awsBatch.py' adding 'toil/batchSystems/cleanup_support.py' adding 'toil/batchSystems/contained_executor.py' adding 'toil/batchSystems/gridengine.py' adding 'toil/batchSystems/htcondor.py' adding 'toil/batchSystems/kubernetes.py' adding 'toil/batchSystems/local_support.py' adding 'toil/batchSystems/lsf.py' adding 'toil/batchSystems/lsfHelper.py' adding 'toil/batchSystems/options.py' adding 'toil/batchSystems/registry.py' adding 'toil/batchSystems/singleMachine.py' adding 'toil/batchSystems/slurm.py' adding 'toil/batchSystems/torque.py' adding 'toil/batchSystems/mesos/__init__.py' adding 'toil/batchSystems/mesos/batchSystem.py' adding 'toil/batchSystems/mesos/conftest.py' adding 'toil/batchSystems/mesos/executor.py' adding 'toil/batchSystems/mesos/test/__init__.py' adding 'toil/cwl/__init__.py' adding 'toil/cwl/conftest.py' adding 'toil/cwl/cwltoil.py' adding 'toil/cwl/utils.py' adding 'toil/fileStores/__init__.py' adding 'toil/fileStores/abstractFileStore.py' adding 'toil/fileStores/cachingFileStore.py' adding 'toil/fileStores/nonCachingFileStore.py' adding 'toil/jobStores/__init__.py' adding 'toil/jobStores/abstractJobStore.py' adding 'toil/jobStores/conftest.py' adding 'toil/jobStores/fileJobStore.py' adding 'toil/jobStores/googleJobStore.py' adding 'toil/jobStores/utils.py' adding 'toil/jobStores/aws/__init__.py' adding 'toil/jobStores/aws/jobStore.py' adding 'toil/jobStores/aws/utils.py' adding 'toil/lib/__init__.py' adding 'toil/lib/accelerators.py' adding 'toil/lib/bioio.py' adding 'toil/lib/compatibility.py' adding 'toil/lib/conversions.py' adding 'toil/lib/docker.py' adding 'toil/lib/ec2.py' adding 'toil/lib/ec2nodes.py' adding 'toil/lib/exceptions.py' adding 'toil/lib/expando.py' adding 'toil/lib/ftp_utils.py' adding 'toil/lib/generatedEC2Lists.py' adding 'toil/lib/humanize.py' adding 'toil/lib/integration.py' adding 'toil/lib/io.py' adding 'toil/lib/iterables.py' adding 'toil/lib/memoize.py' adding 'toil/lib/misc.py' adding 'toil/lib/objects.py' adding 'toil/lib/resources.py' adding 'toil/lib/retry.py' adding 'toil/lib/threading.py' adding 'toil/lib/throttle.py' adding 'toil/lib/aws/__init__.py' adding 'toil/lib/aws/ami.py' adding 'toil/lib/aws/iam.py' adding 'toil/lib/aws/s3.py' adding 'toil/lib/aws/session.py' adding 'toil/lib/aws/utils.py' adding 'toil/lib/encryption/__init__.py' adding 'toil/lib/encryption/_dummy.py' adding 'toil/lib/encryption/_nacl.py' adding 'toil/lib/encryption/conftest.py' adding 'toil/options/__init__.py' adding 'toil/options/common.py' adding 'toil/options/cwl.py' adding 'toil/options/runner.py' adding 'toil/options/wdl.py' adding 'toil/provisioners/__init__.py' adding 'toil/provisioners/abstractProvisioner.py' adding 'toil/provisioners/clusterScaler.py' adding 'toil/provisioners/gceProvisioner.py' adding 'toil/provisioners/node.py' adding 'toil/provisioners/aws/__init__.py' adding 'toil/provisioners/aws/awsProvisioner.py' adding 'toil/server/__init__.py' adding 'toil/server/app.py' adding 'toil/server/celery_app.py' adding 'toil/server/utils.py' adding 'toil/server/wsgi_app.py' adding 'toil/server/api_spec/__init__.py' adding 'toil/server/api_spec/workflow_execution_service.swagger.yaml' adding 'toil/server/cli/__init__.py' adding 'toil/server/cli/wes_cwl_runner.py' adding 'toil/server/wes/__init__.py' adding 'toil/server/wes/abstract_backend.py' adding 'toil/server/wes/amazon_wes_utils.py' adding 'toil/server/wes/tasks.py' adding 'toil/server/wes/toil_backend.py' adding 'toil/test/__init__.py' adding 'toil/test/batchSystems/__init__.py' adding 'toil/test/batchSystems/batchSystemTest.py' adding 'toil/test/batchSystems/batch_system_plugin_test.py' adding 'toil/test/batchSystems/test_gridengine.py' adding 'toil/test/batchSystems/test_lsf_helper.py' adding 'toil/test/batchSystems/test_slurm.py' adding 'toil/test/cactus/__init__.py' adding 'toil/test/cactus/test_cactus_integration.py' adding 'toil/test/cwl/__init__.py' adding 'toil/test/cwl/alwaysfails.cwl' adding 'toil/test/cwl/colon_test_output.cwl' adding 'toil/test/cwl/colon_test_output_job.yaml' adding 'toil/test/cwl/conditional_wf.cwl' adding 'toil/test/cwl/conditional_wf.yaml' adding 'toil/test/cwl/conftest.py' adding 'toil/test/cwl/cwlTest.py' adding 'toil/test/cwl/directory_from_directory.cwl' adding 'toil/test/cwl/download.cwl' adding 'toil/test/cwl/download_directory.cwl' adding 'toil/test/cwl/download_subdirectory.cwl' adding 'toil/test/cwl/echo-stderr.cwl' adding 'toil/test/cwl/echo-stdout-log-dir.cwl' adding 'toil/test/cwl/echo.cwl' adding 'toil/test/cwl/echo_string.cwl' adding 'toil/test/cwl/echo_string_scatter_capture_stdout.cwl' adding 'toil/test/cwl/file_from_directory.cwl' adding 'toil/test/cwl/glob_dir.cwl' adding 'toil/test/cwl/load_contents.cwl' adding 'toil/test/cwl/measure_default_memory.cwl' adding 'toil/test/cwl/mpi_simple.cwl' adding 'toil/test/cwl/not_run_required_input.cwl' adding 'toil/test/cwl/nvidia_smi.cwl' adding 'toil/test/cwl/preemptible.cwl' adding 'toil/test/cwl/preemptible_expression.cwl' adding 'toil/test/cwl/revsort.cwl' adding 'toil/test/cwl/revsort2.cwl' adding 'toil/test/cwl/revtool.cwl' adding 'toil/test/cwl/revtool2.cwl' adding 'toil/test/cwl/s3_secondary_file.cwl' adding 'toil/test/cwl/scatter_duplicate_outputs.cwl' adding 'toil/test/cwl/seqtk_seq.cwl' adding 'toil/test/cwl/sorttool.cwl' adding 'toil/test/cwl/stream.cwl' adding 'toil/test/cwl/test_filename_conflict_detection.cwl' adding 'toil/test/cwl/test_filename_conflict_detection_at_root.cwl' adding 'toil/test/cwl/test_filename_conflict_resolution.cwl' adding 'toil/test/cwl/whale.txt' adding 'toil/test/cwl/directory/directory/file.txt' adding 'toil/test/cwl/mock_mpi/fake_mpi.yml' adding 'toil/test/docs/__init__.py' adding 'toil/test/docs/scriptsTest.py' adding 'toil/test/docs/scripts/example_alwaysfail.py' adding 'toil/test/docs/scripts/example_alwaysfail_with_files.wdl' adding 'toil/test/docs/scripts/example_cachingbenchmark.py' adding 'toil/test/docs/scripts/tutorial_arguments.py' adding 'toil/test/docs/scripts/tutorial_debugging.patch' adding 'toil/test/docs/scripts/tutorial_debugging_hangs.wdl' adding 'toil/test/docs/scripts/tutorial_debugging_works.wdl' adding 'toil/test/docs/scripts/tutorial_docker.py' adding 'toil/test/docs/scripts/tutorial_dynamic.py' adding 'toil/test/docs/scripts/tutorial_encapsulation.py' adding 'toil/test/docs/scripts/tutorial_encapsulation2.py' adding 'toil/test/docs/scripts/tutorial_helloworld.py' adding 'toil/test/docs/scripts/tutorial_invokeworkflow.py' adding 'toil/test/docs/scripts/tutorial_invokeworkflow2.py' adding 'toil/test/docs/scripts/tutorial_jobfunctions.py' adding 'toil/test/docs/scripts/tutorial_managing.py' adding 'toil/test/docs/scripts/tutorial_managing2.py' adding 'toil/test/docs/scripts/tutorial_multiplejobs.py' adding 'toil/test/docs/scripts/tutorial_multiplejobs2.py' adding 'toil/test/docs/scripts/tutorial_multiplejobs3.py' adding 'toil/test/docs/scripts/tutorial_promises.py' adding 'toil/test/docs/scripts/tutorial_promises2.py' adding 'toil/test/docs/scripts/tutorial_quickstart.py' adding 'toil/test/docs/scripts/tutorial_requirements.py' adding 'toil/test/docs/scripts/tutorial_services.py' adding 'toil/test/docs/scripts/tutorial_staging.py' adding 'toil/test/docs/scripts/tutorial_stats.py' adding 'toil/test/docs/scripts/stagingExampleFiles/in.txt' adding 'toil/test/docs/scripts/stagingExampleFiles/out.txt' adding 'toil/test/jobStores/__init__.py' adding 'toil/test/jobStores/jobStoreTest.py' adding 'toil/test/lib/__init__.py' adding 'toil/test/lib/dockerTest.py' adding 'toil/test/lib/test_conversions.py' adding 'toil/test/lib/test_ec2.py' adding 'toil/test/lib/test_integration.py' adding 'toil/test/lib/test_misc.py' adding 'toil/test/lib/aws/__init__.py' adding 'toil/test/lib/aws/test_iam.py' adding 'toil/test/lib/aws/test_s3.py' adding 'toil/test/lib/aws/test_utils.py' adding 'toil/test/mesos/MesosDataStructuresTest.py' adding 'toil/test/mesos/__init__.py' adding 'toil/test/mesos/helloWorld.py' adding 'toil/test/mesos/stress.py' adding 'toil/test/options/__init__.py' adding 'toil/test/options/options.py' adding 'toil/test/provisioners/__init__.py' adding 'toil/test/provisioners/clusterScalerTest.py' adding 'toil/test/provisioners/clusterTest.py' adding 'toil/test/provisioners/gceProvisionerTest.py' adding 'toil/test/provisioners/provisionerTest.py' adding 'toil/test/provisioners/restartScript.py' adding 'toil/test/provisioners/aws/__init__.py' adding 'toil/test/provisioners/aws/awsProvisionerTest.py' adding 'toil/test/server/__init__.py' adding 'toil/test/server/serverTest.py' adding 'toil/test/sort/__init__.py' adding 'toil/test/sort/restart_sort.py' adding 'toil/test/sort/sort.py' adding 'toil/test/sort/sortTest.py' adding 'toil/test/src/__init__.py' adding 'toil/test/src/autoDeploymentTest.py' adding 'toil/test/src/busTest.py' adding 'toil/test/src/checkpointTest.py' adding 'toil/test/src/deferredFunctionTest.py' adding 'toil/test/src/dockerCheckTest.py' adding 'toil/test/src/environmentTest.py' adding 'toil/test/src/fileStoreTest.py' adding 'toil/test/src/helloWorldTest.py' adding 'toil/test/src/importExportFileTest.py' adding 'toil/test/src/jobDescriptionTest.py' adding 'toil/test/src/jobEncapsulationTest.py' adding 'toil/test/src/jobFileStoreTest.py' adding 'toil/test/src/jobServiceTest.py' adding 'toil/test/src/jobTest.py' adding 'toil/test/src/miscTests.py' adding 'toil/test/src/promisedRequirementTest.py' adding 'toil/test/src/promisesTest.py' adding 'toil/test/src/realtimeLoggerTest.py' adding 'toil/test/src/regularLogTest.py' adding 'toil/test/src/resourceTest.py' adding 'toil/test/src/restartDAGTest.py' adding 'toil/test/src/resumabilityTest.py' adding 'toil/test/src/retainTempDirTest.py' adding 'toil/test/src/systemTest.py' adding 'toil/test/src/threadingTest.py' adding 'toil/test/src/toilContextManagerTest.py' adding 'toil/test/src/userDefinedJobArgTypeTest.py' adding 'toil/test/src/workerTest.py' adding 'toil/test/utils/__init__.py' adding 'toil/test/utils/toilDebugTest.py' adding 'toil/test/utils/toilKillTest.py' adding 'toil/test/utils/utilsTest.py' adding 'toil/test/utils/ABCWorkflowDebug/B_file.txt' adding 'toil/test/utils/ABCWorkflowDebug/debugWorkflow.py' adding 'toil/test/utils/ABCWorkflowDebug/mkFile.py' adding 'toil/test/utils/ABCWorkflowDebug/sleep.cwl' adding 'toil/test/utils/ABCWorkflowDebug/sleep.yaml' adding 'toil/test/wdl/__init__.py' adding 'toil/test/wdl/wdltoil_test.py' adding 'toil/test/wdl/wdltoil_test_kubernetes.py' adding 'toil/test/wdl/testfiles/test_boolean.txt' adding 'toil/test/wdl/testfiles/test_float.txt' adding 'toil/test/wdl/testfiles/test_int.txt' adding 'toil/test/wdl/testfiles/test_lines.txt' adding 'toil/test/wdl/testfiles/test_map.txt' adding 'toil/test/wdl/testfiles/test_string.txt' adding 'toil/utils/__init__.py' adding 'toil/utils/toilClean.py' adding 'toil/utils/toilConfig.py' adding 'toil/utils/toilDebugFile.py' adding 'toil/utils/toilDebugJob.py' adding 'toil/utils/toilDestroyCluster.py' adding 'toil/utils/toilKill.py' adding 'toil/utils/toilLaunchCluster.py' adding 'toil/utils/toilMain.py' adding 'toil/utils/toilRsyncCluster.py' adding 'toil/utils/toilServer.py' adding 'toil/utils/toilSshCluster.py' adding 'toil/utils/toilStats.py' adding 'toil/utils/toilStatus.py' adding 'toil/utils/toilUpdateEC2Instances.py' adding 'toil/wdl/__init__.py' adding 'toil/wdl/utils.py' adding 'toil/wdl/wdltoil.py' adding 'toil-8.0.0.dist-info/LICENSE' adding 'toil-8.0.0.dist-info/METADATA' adding 'toil-8.0.0.dist-info/WHEEL' adding 'toil-8.0.0.dist-info/entry_points.txt' adding 'toil-8.0.0.dist-info/top_level.txt' adding 'toil-8.0.0.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Successfully built toil-8.0.0-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/toil-8.0.0' PYTHONPATH=/build/reproducible-path/toil-8.0.0/src http_proxy='127.0.0.1:9' /usr/bin/make -C docs man SPHINXOPTS="" make[2]: Entering directory '/build/reproducible-path/toil-8.0.0/docs' Running Sphinx v8.1.3 loading translations [en]... done making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. [autosummary] generating autosummary for: appendices/architecture.rst, appendices/aws_min_permissions.rst, appendices/deploy.rst, appendices/environment_vars.rst, contributing/checklists.rst, contributing/contributing.rst, cwl/introduction.rst, cwl/running.rst, gettingStarted/install.rst, gettingStarted/quickStart.rst, ..., running/cloud/kubernetes.rst, running/debugging.rst, running/hpcEnvironments.rst, running/introduction.rst, running/server/wes.rst, running/utils.rst, wdl/conformance.rst, wdl/developing.rst, wdl/introduction.rst, wdl/running.rst [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/utils/ABCWorkflowDebug/mkFile.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_staging.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_stats.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_services.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_requirements.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_quickstart.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_promises2.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_promises.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_multiplejobs3.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_multiplejobs2.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_multiplejobs.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_managing2.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_managing.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_jobfunctions.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_invokeworkflow2.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_invokeworkflow.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_helloworld.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_encapsulation2.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_encapsulation.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_dynamic.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_docker.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/tutorial_arguments.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/example_cachingbenchmark.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scripts/example_alwaysfail.py [AutoAPI] Ignoring /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/mock_mpi/fake_mpi_run.py [AutoAPI] Reading files... [ 0%] /build/reproducible-path/toil-8.0.0/src/toil/version.py [AutoAPI] Reading files... [ 1%] /build/reproducible-path/toil-8.0.0/src/toil/worker.py [AutoAPI] Reading files... [ 1%] /build/reproducible-path/toil-8.0.0/src/toil/toilState.py [AutoAPI] Reading files... [ 2%] /build/reproducible-path/toil-8.0.0/src/toil/statsAndLogging.py [AutoAPI] Reading files... [ 2%] /build/reproducible-path/toil-8.0.0/src/toil/serviceManager.py [AutoAPI] Reading files... [ 3%] /build/reproducible-path/toil-8.0.0/src/toil/resource.py [AutoAPI] Reading files... [ 3%] /build/reproducible-path/toil-8.0.0/src/toil/realtimeLogger.py [AutoAPI] Reading files... [ 4%] /build/reproducible-path/toil-8.0.0/src/toil/leader.py [AutoAPI] Reading files... [ 4%] /build/reproducible-path/toil-8.0.0/src/toil/job.py [AutoAPI] Reading files... [ 5%] /build/reproducible-path/toil-8.0.0/src/toil/exceptions.py [AutoAPI] Reading files... [ 5%] /build/reproducible-path/toil-8.0.0/src/toil/deferred.py [AutoAPI] Reading files... [ 6%] /build/reproducible-path/toil-8.0.0/src/toil/common.py [AutoAPI] Reading files... [ 6%] /build/reproducible-path/toil-8.0.0/src/toil/bus.py [AutoAPI] Reading files... [ 7%] /build/reproducible-path/toil-8.0.0/src/toil/__init__.py [AutoAPI] Reading files... [ 7%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/wdltoil.py [AutoAPI] Reading files... [ 8%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/utils.py [AutoAPI] Reading files... [ 8%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/__init__.py [AutoAPI] Reading files... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilUpdateEC2Instances.py [AutoAPI] Reading files... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilStatus.py [AutoAPI] Reading files... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilStats.py [AutoAPI] Reading files... [ 10%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilSshCluster.py [AutoAPI] Reading files... [ 10%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilServer.py [AutoAPI] Reading files... [ 11%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilRsyncCluster.py [AutoAPI] Reading files... [ 11%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilMain.py [AutoAPI] Reading files... [ 12%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilLaunchCluster.py [AutoAPI] Reading files... [ 12%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilKill.py [AutoAPI] Reading files... [ 13%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDestroyCluster.py [AutoAPI] Reading files... [ 13%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDebugJob.py [AutoAPI] Reading files... [ 14%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDebugFile.py [AutoAPI] Reading files... [ 14%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilConfig.py [AutoAPI] Reading files... [ 15%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilClean.py [AutoAPI] Reading files... [ 15%] /build/reproducible-path/toil-8.0.0/src/toil/utils/__init__.py [AutoAPI] Reading files... [ 16%] /build/reproducible-path/toil-8.0.0/src/toil/test/__init__.py [AutoAPI] Reading files... [ 16%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/wdltoil_test.py [AutoAPI] Reading files... [ 17%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/wdltoil_test_kubernetes.py [AutoAPI] Reading files... [ 17%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/__init__.py [AutoAPI] Reading files... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/utilsTest.py [AutoAPI] Reading files... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/toilKillTest.py [AutoAPI] Reading files... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/toilDebugTest.py [AutoAPI] Reading files... [ 19%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/__init__.py [AutoAPI] Reading files... [ 19%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/resourceTest.py [AutoAPI] Reading files... [ 20%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/workerTest.py [AutoAPI] Reading files... [ 20%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/userDefinedJobArgTypeTest.py [AutoAPI] Reading files... [ 21%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/toilContextManagerTest.py [AutoAPI] Reading files... [ 21%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/threadingTest.py [AutoAPI] Reading files... [ 22%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/systemTest.py [AutoAPI] Reading files... [ 22%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/retainTempDirTest.py [AutoAPI] Reading files... [ 23%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/resumabilityTest.py [AutoAPI] Reading files... [ 23%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/restartDAGTest.py [AutoAPI] Reading files... [ 24%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/regularLogTest.py [AutoAPI] Reading files... [ 24%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/realtimeLoggerTest.py [AutoAPI] Reading files... [ 25%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/promisesTest.py [AutoAPI] Reading files... [ 25%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/promisedRequirementTest.py [AutoAPI] Reading files... [ 26%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/miscTests.py [AutoAPI] Reading files... [ 26%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobTest.py [AutoAPI] Reading files... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobServiceTest.py [AutoAPI] Reading files... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobFileStoreTest.py [AutoAPI] Reading files... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobEncapsulationTest.py [AutoAPI] Reading files... [ 28%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobDescriptionTest.py [AutoAPI] Reading files... [ 28%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/importExportFileTest.py [AutoAPI] Reading files... [ 29%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/helloWorldTest.py [AutoAPI] Reading files... [ 29%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/fileStoreTest.py [AutoAPI] Reading files... [ 30%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/environmentTest.py [AutoAPI] Reading files... [ 30%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/dockerCheckTest.py [AutoAPI] Reading files... [ 31%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/deferredFunctionTest.py [AutoAPI] Reading files... [ 31%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/checkpointTest.py [AutoAPI] Reading files... [ 32%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/busTest.py [AutoAPI] Reading files... [ 32%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/autoDeploymentTest.py [AutoAPI] Reading files... [ 33%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/__init__.py [AutoAPI] Reading files... [ 33%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/sortTest.py [AutoAPI] Reading files... [ 34%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/sort.py [AutoAPI] Reading files... [ 34%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/restart_sort.py [AutoAPI] Reading files... [ 35%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/__init__.py [AutoAPI] Reading files... [ 35%] /build/reproducible-path/toil-8.0.0/src/toil/test/server/serverTest.py [AutoAPI] Reading files... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/server/__init__.py [AutoAPI] Reading files... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/gceProvisionerTest.py [AutoAPI] Reading files... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/clusterTest.py [AutoAPI] Reading files... [ 37%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/restartScript.py [AutoAPI] Reading files... [ 37%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/provisionerTest.py [AutoAPI] Reading files... [ 38%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/clusterScalerTest.py [AutoAPI] Reading files... [ 38%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/__init__.py [AutoAPI] Reading files... [ 39%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/aws/awsProvisionerTest.py [AutoAPI] Reading files... [ 39%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/aws/__init__.py [AutoAPI] Reading files... [ 40%] /build/reproducible-path/toil-8.0.0/src/toil/test/options/options.py [AutoAPI] Reading files... [ 40%] /build/reproducible-path/toil-8.0.0/src/toil/test/options/__init__.py [AutoAPI] Reading files... [ 41%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/stress.py [AutoAPI] Reading files... [ 41%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/helloWorld.py [AutoAPI] Reading files... [ 42%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/__init__.py [AutoAPI] Reading files... [ 42%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/MesosDataStructuresTest.py [AutoAPI] Reading files... [ 43%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_misc.py [AutoAPI] Reading files... [ 43%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_integration.py [AutoAPI] Reading files... [ 44%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_ec2.py [AutoAPI] Reading files... [ 44%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_conversions.py [AutoAPI] Reading files... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/dockerTest.py [AutoAPI] Reading files... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/__init__.py [AutoAPI] Reading files... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_utils.py [AutoAPI] Reading files... [ 46%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_s3.py [AutoAPI] Reading files... [ 46%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_iam.py [AutoAPI] Reading files... [ 47%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/__init__.py [AutoAPI] Reading files... [ 47%] /build/reproducible-path/toil-8.0.0/src/toil/test/jobStores/jobStoreTest.py [AutoAPI] Reading files... [ 48%] /build/reproducible-path/toil-8.0.0/src/toil/test/jobStores/__init__.py [AutoAPI] Reading files... [ 48%] /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scriptsTest.py [AutoAPI] Reading files... [ 49%] /build/reproducible-path/toil-8.0.0/src/toil/test/docs/__init__.py [AutoAPI] Reading files... [ 49%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/cwlTest.py [AutoAPI] Reading files... [ 50%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/conftest.py [AutoAPI] Reading files... [ 50%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/__init__.py [AutoAPI] Reading files... [ 51%] /build/reproducible-path/toil-8.0.0/src/toil/test/cactus/test_cactus_integration.py [AutoAPI] Reading files... [ 51%] /build/reproducible-path/toil-8.0.0/src/toil/test/cactus/__init__.py [AutoAPI] Reading files... [ 52%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_slurm.py [AutoAPI] Reading files... [ 52%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_lsf_helper.py [AutoAPI] Reading files... [ 53%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_gridengine.py [AutoAPI] Reading files... [ 53%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/batch_system_plugin_test.py [AutoAPI] Reading files... [ 54%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/batchSystemTest.py [AutoAPI] Reading files... [ 54%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/__init__.py [AutoAPI] Reading files... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/wsgi_app.py [AutoAPI] Reading files... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/utils.py [AutoAPI] Reading files... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/celery_app.py [AutoAPI] Reading files... [ 56%] /build/reproducible-path/toil-8.0.0/src/toil/server/app.py [AutoAPI] Reading files... [ 56%] /build/reproducible-path/toil-8.0.0/src/toil/server/__init__.py [AutoAPI] Reading files... [ 57%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/toil_backend.py [AutoAPI] Reading files... [ 57%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/tasks.py [AutoAPI] Reading files... [ 58%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/amazon_wes_utils.py [AutoAPI] Reading files... [ 58%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/abstract_backend.py [AutoAPI] Reading files... [ 59%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/__init__.py [AutoAPI] Reading files... [ 59%] /build/reproducible-path/toil-8.0.0/src/toil/server/cli/wes_cwl_runner.py [AutoAPI] Reading files... [ 60%] /build/reproducible-path/toil-8.0.0/src/toil/server/cli/__init__.py [AutoAPI] Reading files... [ 60%] /build/reproducible-path/toil-8.0.0/src/toil/server/api_spec/__init__.py [AutoAPI] Reading files... [ 61%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/node.py [AutoAPI] Reading files... [ 61%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/gceProvisioner.py [AutoAPI] Reading files... [ 62%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/clusterScaler.py [AutoAPI] Reading files... [ 62%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/abstractProvisioner.py [AutoAPI] Reading files... [ 63%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/__init__.py [AutoAPI] Reading files... [ 63%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/aws/awsProvisioner.py [AutoAPI] Reading files... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/aws/__init__.py [AutoAPI] Reading files... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/options/wdl.py [AutoAPI] Reading files... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/options/runner.py [AutoAPI] Reading files... [ 65%] /build/reproducible-path/toil-8.0.0/src/toil/options/cwl.py [AutoAPI] Reading files... [ 65%] /build/reproducible-path/toil-8.0.0/src/toil/options/common.py [AutoAPI] Reading files... [ 66%] /build/reproducible-path/toil-8.0.0/src/toil/options/__init__.py [AutoAPI] Reading files... [ 66%] /build/reproducible-path/toil-8.0.0/src/toil/lib/throttle.py [AutoAPI] Reading files... [ 67%] /build/reproducible-path/toil-8.0.0/src/toil/lib/threading.py [AutoAPI] Reading files... [ 67%] /build/reproducible-path/toil-8.0.0/src/toil/lib/retry.py [AutoAPI] Reading files... [ 68%] /build/reproducible-path/toil-8.0.0/src/toil/lib/resources.py [AutoAPI] Reading files... [ 68%] /build/reproducible-path/toil-8.0.0/src/toil/lib/objects.py [AutoAPI] Reading files... [ 69%] /build/reproducible-path/toil-8.0.0/src/toil/lib/misc.py [AutoAPI] Reading files... [ 69%] /build/reproducible-path/toil-8.0.0/src/toil/lib/memoize.py [AutoAPI] Reading files... [ 70%] /build/reproducible-path/toil-8.0.0/src/toil/lib/iterables.py [AutoAPI] Reading files... [ 70%] /build/reproducible-path/toil-8.0.0/src/toil/lib/io.py [AutoAPI] Reading files... [ 71%] /build/reproducible-path/toil-8.0.0/src/toil/lib/integration.py [AutoAPI] Reading files... [ 71%] /build/reproducible-path/toil-8.0.0/src/toil/lib/humanize.py [AutoAPI] Reading files... [ 72%] /build/reproducible-path/toil-8.0.0/src/toil/lib/generatedEC2Lists.py [AutoAPI] Reading files... [ 72%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ftp_utils.py [AutoAPI] Reading files... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/expando.py [AutoAPI] Reading files... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/exceptions.py [AutoAPI] Reading files... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ec2nodes.py [AutoAPI] Reading files... [ 74%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ec2.py [AutoAPI] Reading files... [ 74%] /build/reproducible-path/toil-8.0.0/src/toil/lib/docker.py [AutoAPI] Reading files... [ 75%] /build/reproducible-path/toil-8.0.0/src/toil/lib/conversions.py [AutoAPI] Reading files... [ 75%] /build/reproducible-path/toil-8.0.0/src/toil/lib/compatibility.py [AutoAPI] Reading files... [ 76%] /build/reproducible-path/toil-8.0.0/src/toil/lib/bioio.py [AutoAPI] Reading files... [ 76%] /build/reproducible-path/toil-8.0.0/src/toil/lib/accelerators.py [AutoAPI] Reading files... [ 77%] /build/reproducible-path/toil-8.0.0/src/toil/lib/__init__.py [AutoAPI] Reading files... [ 77%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/conftest.py [AutoAPI] Reading files... [ 78%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/_nacl.py [AutoAPI] Reading files... [ 78%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/_dummy.py [AutoAPI] Reading files... [ 79%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/__init__.py [AutoAPI] Reading files... [ 79%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/utils.py [AutoAPI] Reading files... [ 80%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/session.py [AutoAPI] Reading files... [ 80%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/s3.py [AutoAPI] Reading files... [ 81%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/iam.py [AutoAPI] Reading files... [ 81%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/ami.py [AutoAPI] Reading files... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/__init__.py [AutoAPI] Reading files... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/fileJobStore.py [AutoAPI] Reading files... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/utils.py [AutoAPI] Reading files... [ 83%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/googleJobStore.py [AutoAPI] Reading files... [ 83%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/conftest.py [AutoAPI] Reading files... [ 84%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/abstractJobStore.py [AutoAPI] Reading files... [ 84%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/__init__.py [AutoAPI] Reading files... [ 85%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/utils.py [AutoAPI] Reading files... [ 85%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/jobStore.py [AutoAPI] Reading files... [ 86%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/__init__.py [AutoAPI] Reading files... [ 86%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/nonCachingFileStore.py [AutoAPI] Reading files... [ 87%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/cachingFileStore.py [AutoAPI] Reading files... [ 87%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/abstractFileStore.py [AutoAPI] Reading files... [ 88%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/__init__.py [AutoAPI] Reading files... [ 88%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/utils.py [AutoAPI] Reading files... [ 89%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/cwltoil.py [AutoAPI] Reading files... [ 89%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/conftest.py [AutoAPI] Reading files... [ 90%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/__init__.py [AutoAPI] Reading files... [ 90%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/torque.py [AutoAPI] Reading files... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/slurm.py [AutoAPI] Reading files... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/singleMachine.py [AutoAPI] Reading files... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/registry.py [AutoAPI] Reading files... [ 92%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/options.py [AutoAPI] Reading files... [ 92%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/lsfHelper.py [AutoAPI] Reading files... [ 93%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/lsf.py [AutoAPI] Reading files... [ 93%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/local_support.py [AutoAPI] Reading files... [ 94%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/kubernetes.py [AutoAPI] Reading files... [ 94%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/htcondor.py [AutoAPI] Reading files... [ 95%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/gridengine.py [AutoAPI] Reading files... [ 95%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/contained_executor.py [AutoAPI] Reading files... [ 96%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/cleanup_support.py [AutoAPI] Reading files... [ 96%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/awsBatch.py [AutoAPI] Reading files... [ 97%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/abstractGridEngineBatchSystem.py [AutoAPI] Reading files... [ 97%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/abstractBatchSystem.py [AutoAPI] Reading files... [ 98%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/__init__.py [AutoAPI] Reading files... [ 98%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/executor.py [AutoAPI] Reading files... [ 99%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/conftest.py [AutoAPI] Reading files... [ 99%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/batchSystem.py [AutoAPI] Reading files... [100%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/__init__.py [AutoAPI] Reading files... [100%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/test/__init__.py [AutoAPI] Mapping Data... [ 0%] /build/reproducible-path/toil-8.0.0/src/toil/version.py [AutoAPI] Mapping Data... [ 1%] /build/reproducible-path/toil-8.0.0/src/toil/worker.py [AutoAPI] Mapping Data... [ 1%] /build/reproducible-path/toil-8.0.0/src/toil/toilState.py [AutoAPI] Mapping Data... [ 2%] /build/reproducible-path/toil-8.0.0/src/toil/statsAndLogging.py [AutoAPI] Mapping Data... [ 2%] /build/reproducible-path/toil-8.0.0/src/toil/serviceManager.py [AutoAPI] Mapping Data... [ 3%] /build/reproducible-path/toil-8.0.0/src/toil/resource.py [AutoAPI] Mapping Data... [ 3%] /build/reproducible-path/toil-8.0.0/src/toil/realtimeLogger.py [AutoAPI] Mapping Data... [ 4%] /build/reproducible-path/toil-8.0.0/src/toil/leader.py [AutoAPI] Mapping Data... [ 4%] /build/reproducible-path/toil-8.0.0/src/toil/job.py [AutoAPI] Mapping Data... [ 5%] /build/reproducible-path/toil-8.0.0/src/toil/exceptions.py [AutoAPI] Mapping Data... [ 5%] /build/reproducible-path/toil-8.0.0/src/toil/deferred.py [AutoAPI] Mapping Data... [ 6%] /build/reproducible-path/toil-8.0.0/src/toil/common.py [AutoAPI] Mapping Data... [ 6%] /build/reproducible-path/toil-8.0.0/src/toil/bus.py [AutoAPI] Mapping Data... [ 7%] /build/reproducible-path/toil-8.0.0/src/toil/__init__.py [AutoAPI] Mapping Data... [ 7%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/wdltoil.py [AutoAPI] Mapping Data... [ 8%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/utils.py [AutoAPI] Mapping Data... [ 8%] /build/reproducible-path/toil-8.0.0/src/toil/wdl/__init__.py [AutoAPI] Mapping Data... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilUpdateEC2Instances.py [AutoAPI] Mapping Data... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilStatus.py [AutoAPI] Mapping Data... [ 9%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilStats.py [AutoAPI] Mapping Data... [ 10%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilSshCluster.py [AutoAPI] Mapping Data... [ 10%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilServer.py [AutoAPI] Mapping Data... [ 11%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilRsyncCluster.py [AutoAPI] Mapping Data... [ 11%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilMain.py [AutoAPI] Mapping Data... [ 12%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilLaunchCluster.py [AutoAPI] Mapping Data... [ 12%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilKill.py [AutoAPI] Mapping Data... [ 13%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDestroyCluster.py [AutoAPI] Mapping Data... [ 13%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDebugJob.py [AutoAPI] Mapping Data... [ 14%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilDebugFile.py [AutoAPI] Mapping Data... [ 14%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilConfig.py [AutoAPI] Mapping Data... [ 15%] /build/reproducible-path/toil-8.0.0/src/toil/utils/toilClean.py [AutoAPI] Mapping Data... [ 15%] /build/reproducible-path/toil-8.0.0/src/toil/utils/__init__.py [AutoAPI] Mapping Data... [ 16%] /build/reproducible-path/toil-8.0.0/src/toil/test/__init__.py [AutoAPI] Mapping Data... [ 16%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/wdltoil_test.py [AutoAPI] Mapping Data... [ 17%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/wdltoil_test_kubernetes.py [AutoAPI] Mapping Data... [ 17%] /build/reproducible-path/toil-8.0.0/src/toil/test/wdl/__init__.py [AutoAPI] Mapping Data... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/utilsTest.py [AutoAPI] Mapping Data... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/toilKillTest.py [AutoAPI] Mapping Data... [ 18%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/toilDebugTest.py [AutoAPI] Mapping Data... [ 19%] /build/reproducible-path/toil-8.0.0/src/toil/test/utils/__init__.py [AutoAPI] Mapping Data... [ 19%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/resourceTest.py [AutoAPI] Mapping Data... [ 20%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/workerTest.py [AutoAPI] Mapping Data... [ 20%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/userDefinedJobArgTypeTest.py [AutoAPI] Mapping Data... [ 21%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/toilContextManagerTest.py [AutoAPI] Mapping Data... [ 21%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/threadingTest.py [AutoAPI] Mapping Data... [ 22%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/systemTest.py [AutoAPI] Mapping Data... [ 22%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/retainTempDirTest.py [AutoAPI] Mapping Data... [ 23%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/resumabilityTest.py [AutoAPI] Mapping Data... [ 23%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/restartDAGTest.py [AutoAPI] Mapping Data... [ 24%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/regularLogTest.py [AutoAPI] Mapping Data... [ 24%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/realtimeLoggerTest.py [AutoAPI] Mapping Data... [ 25%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/promisesTest.py [AutoAPI] Mapping Data... [ 25%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/promisedRequirementTest.py [AutoAPI] Mapping Data... [ 26%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/miscTests.py [AutoAPI] Mapping Data... [ 26%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobTest.py [AutoAPI] Mapping Data... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobServiceTest.py [AutoAPI] Mapping Data... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobFileStoreTest.py [AutoAPI] Mapping Data... [ 27%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobEncapsulationTest.py [AutoAPI] Mapping Data... [ 28%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/jobDescriptionTest.py [AutoAPI] Mapping Data... [ 28%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/importExportFileTest.py [AutoAPI] Mapping Data... [ 29%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/helloWorldTest.py [AutoAPI] Mapping Data... [ 29%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/fileStoreTest.py [AutoAPI] Mapping Data... [ 30%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/environmentTest.py [AutoAPI] Mapping Data... [ 30%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/dockerCheckTest.py [AutoAPI] Mapping Data... [ 31%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/deferredFunctionTest.py [AutoAPI] Mapping Data... [ 31%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/checkpointTest.py [AutoAPI] Mapping Data... [ 32%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/busTest.py [AutoAPI] Mapping Data... [ 32%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/autoDeploymentTest.py [AutoAPI] Mapping Data... [ 33%] /build/reproducible-path/toil-8.0.0/src/toil/test/src/__init__.py [AutoAPI] Mapping Data... [ 33%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/sortTest.py [AutoAPI] Mapping Data... [ 34%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/sort.py [AutoAPI] Mapping Data... [ 34%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/restart_sort.py [AutoAPI] Mapping Data... [ 35%] /build/reproducible-path/toil-8.0.0/src/toil/test/sort/__init__.py [AutoAPI] Mapping Data... [ 35%] /build/reproducible-path/toil-8.0.0/src/toil/test/server/serverTest.py [AutoAPI] Mapping Data... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/server/__init__.py [AutoAPI] Mapping Data... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/gceProvisionerTest.py [AutoAPI] Mapping Data... [ 36%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/clusterTest.py [AutoAPI] Mapping Data... [ 37%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/restartScript.py [AutoAPI] Mapping Data... [ 37%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/provisionerTest.py [AutoAPI] Mapping Data... [ 38%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/clusterScalerTest.py [AutoAPI] Mapping Data... [ 38%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/__init__.py [AutoAPI] Mapping Data... [ 39%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/aws/awsProvisionerTest.py [AutoAPI] Mapping Data... [ 39%] /build/reproducible-path/toil-8.0.0/src/toil/test/provisioners/aws/__init__.py [AutoAPI] Mapping Data... [ 40%] /build/reproducible-path/toil-8.0.0/src/toil/test/options/options.py [AutoAPI] Mapping Data... [ 40%] /build/reproducible-path/toil-8.0.0/src/toil/test/options/__init__.py [AutoAPI] Mapping Data... [ 41%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/stress.py [AutoAPI] Mapping Data... [ 41%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/helloWorld.py [AutoAPI] Mapping Data... [ 42%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/__init__.py [AutoAPI] Mapping Data... [ 42%] /build/reproducible-path/toil-8.0.0/src/toil/test/mesos/MesosDataStructuresTest.py [AutoAPI] Mapping Data... [ 43%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_misc.py [AutoAPI] Mapping Data... [ 43%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_integration.py [AutoAPI] Mapping Data... [ 44%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_ec2.py [AutoAPI] Mapping Data... [ 44%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/test_conversions.py [AutoAPI] Mapping Data... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/dockerTest.py [AutoAPI] Mapping Data... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/__init__.py [AutoAPI] Mapping Data... [ 45%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_utils.py [AutoAPI] Mapping Data... [ 46%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_s3.py [AutoAPI] Mapping Data... [ 46%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/test_iam.py [AutoAPI] Mapping Data... [ 47%] /build/reproducible-path/toil-8.0.0/src/toil/test/lib/aws/__init__.py [AutoAPI] Mapping Data... [ 47%] /build/reproducible-path/toil-8.0.0/src/toil/test/jobStores/jobStoreTest.py [AutoAPI] Mapping Data... [ 48%] /build/reproducible-path/toil-8.0.0/src/toil/test/jobStores/__init__.py [AutoAPI] Mapping Data... [ 48%] /build/reproducible-path/toil-8.0.0/src/toil/test/docs/scriptsTest.py [AutoAPI] Mapping Data... [ 49%] /build/reproducible-path/toil-8.0.0/src/toil/test/docs/__init__.py [AutoAPI] Mapping Data... [ 49%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/cwlTest.py [AutoAPI] Mapping Data... [ 50%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/conftest.py [AutoAPI] Mapping Data... [ 50%] /build/reproducible-path/toil-8.0.0/src/toil/test/cwl/__init__.py [AutoAPI] Mapping Data... [ 51%] /build/reproducible-path/toil-8.0.0/src/toil/test/cactus/test_cactus_integration.py [AutoAPI] Mapping Data... [ 51%] /build/reproducible-path/toil-8.0.0/src/toil/test/cactus/__init__.py [AutoAPI] Mapping Data... [ 52%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_slurm.py [AutoAPI] Mapping Data... [ 52%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_lsf_helper.py [AutoAPI] Mapping Data... [ 53%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/test_gridengine.py [AutoAPI] Mapping Data... [ 53%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/batch_system_plugin_test.py [AutoAPI] Mapping Data... [ 54%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/batchSystemTest.py [AutoAPI] Mapping Data... [ 54%] /build/reproducible-path/toil-8.0.0/src/toil/test/batchSystems/__init__.py [AutoAPI] Mapping Data... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/wsgi_app.py [AutoAPI] Mapping Data... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/utils.py [AutoAPI] Mapping Data... [ 55%] /build/reproducible-path/toil-8.0.0/src/toil/server/celery_app.py [AutoAPI] Mapping Data... [ 56%] /build/reproducible-path/toil-8.0.0/src/toil/server/app.py [AutoAPI] Mapping Data... [ 56%] /build/reproducible-path/toil-8.0.0/src/toil/server/__init__.py [AutoAPI] Mapping Data... [ 57%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/toil_backend.py [AutoAPI] Mapping Data... [ 57%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/tasks.py [AutoAPI] Mapping Data... [ 58%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/amazon_wes_utils.py [AutoAPI] Mapping Data... [ 58%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/abstract_backend.py [AutoAPI] Mapping Data... [ 59%] /build/reproducible-path/toil-8.0.0/src/toil/server/wes/__init__.py [AutoAPI] Mapping Data... [ 59%] /build/reproducible-path/toil-8.0.0/src/toil/server/cli/wes_cwl_runner.py [AutoAPI] Mapping Data... [ 60%] /build/reproducible-path/toil-8.0.0/src/toil/server/cli/__init__.py [AutoAPI] Mapping Data... [ 60%] /build/reproducible-path/toil-8.0.0/src/toil/server/api_spec/__init__.py [AutoAPI] Mapping Data... [ 61%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/node.py [AutoAPI] Mapping Data... [ 61%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/gceProvisioner.py [AutoAPI] Mapping Data... [ 62%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/clusterScaler.py [AutoAPI] Mapping Data... [ 62%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/abstractProvisioner.py [AutoAPI] Mapping Data... [ 63%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/__init__.py [AutoAPI] Mapping Data... [ 63%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/aws/awsProvisioner.py [AutoAPI] Mapping Data... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/provisioners/aws/__init__.py [AutoAPI] Mapping Data... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/options/wdl.py [AutoAPI] Mapping Data... [ 64%] /build/reproducible-path/toil-8.0.0/src/toil/options/runner.py [AutoAPI] Mapping Data... [ 65%] /build/reproducible-path/toil-8.0.0/src/toil/options/cwl.py [AutoAPI] Mapping Data... [ 65%] /build/reproducible-path/toil-8.0.0/src/toil/options/common.py [AutoAPI] Mapping Data... [ 66%] /build/reproducible-path/toil-8.0.0/src/toil/options/__init__.py [AutoAPI] Mapping Data... [ 66%] /build/reproducible-path/toil-8.0.0/src/toil/lib/throttle.py [AutoAPI] Mapping Data... [ 67%] /build/reproducible-path/toil-8.0.0/src/toil/lib/threading.py [AutoAPI] Mapping Data... [ 67%] /build/reproducible-path/toil-8.0.0/src/toil/lib/retry.py [AutoAPI] Mapping Data... [ 68%] /build/reproducible-path/toil-8.0.0/src/toil/lib/resources.py [AutoAPI] Mapping Data... [ 68%] /build/reproducible-path/toil-8.0.0/src/toil/lib/objects.py [AutoAPI] Mapping Data... [ 69%] /build/reproducible-path/toil-8.0.0/src/toil/lib/misc.py [AutoAPI] Mapping Data... [ 69%] /build/reproducible-path/toil-8.0.0/src/toil/lib/memoize.py [AutoAPI] Mapping Data... [ 70%] /build/reproducible-path/toil-8.0.0/src/toil/lib/iterables.py [AutoAPI] Mapping Data... [ 70%] /build/reproducible-path/toil-8.0.0/src/toil/lib/io.py [AutoAPI] Mapping Data... [ 71%] /build/reproducible-path/toil-8.0.0/src/toil/lib/integration.py [AutoAPI] Mapping Data... [ 71%] /build/reproducible-path/toil-8.0.0/src/toil/lib/humanize.py [AutoAPI] Mapping Data... [ 72%] /build/reproducible-path/toil-8.0.0/src/toil/lib/generatedEC2Lists.py [AutoAPI] Mapping Data... [ 72%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ftp_utils.py [AutoAPI] Mapping Data... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/expando.py [AutoAPI] Mapping Data... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/exceptions.py [AutoAPI] Mapping Data... [ 73%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ec2nodes.py [AutoAPI] Mapping Data... [ 74%] /build/reproducible-path/toil-8.0.0/src/toil/lib/ec2.py [AutoAPI] Mapping Data... [ 74%] /build/reproducible-path/toil-8.0.0/src/toil/lib/docker.py [AutoAPI] Mapping Data... [ 75%] /build/reproducible-path/toil-8.0.0/src/toil/lib/conversions.py [AutoAPI] Mapping Data... [ 75%] /build/reproducible-path/toil-8.0.0/src/toil/lib/compatibility.py [AutoAPI] Mapping Data... [ 76%] /build/reproducible-path/toil-8.0.0/src/toil/lib/bioio.py [AutoAPI] Mapping Data... [ 76%] /build/reproducible-path/toil-8.0.0/src/toil/lib/accelerators.py [AutoAPI] Mapping Data... [ 77%] /build/reproducible-path/toil-8.0.0/src/toil/lib/__init__.py [AutoAPI] Mapping Data... [ 77%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/conftest.py [AutoAPI] Mapping Data... [ 78%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/_nacl.py [AutoAPI] Mapping Data... [ 78%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/_dummy.py [AutoAPI] Mapping Data... [ 79%] /build/reproducible-path/toil-8.0.0/src/toil/lib/encryption/__init__.py [AutoAPI] Mapping Data... [ 79%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/utils.py [AutoAPI] Mapping Data... [ 80%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/session.py [AutoAPI] Mapping Data... [ 80%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/s3.py [AutoAPI] Mapping Data... [ 81%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/iam.py [AutoAPI] Mapping Data... [ 81%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/ami.py [AutoAPI] Mapping Data... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/lib/aws/__init__.py [AutoAPI] Mapping Data... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/fileJobStore.py [AutoAPI] Mapping Data... [ 82%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/utils.py [AutoAPI] Mapping Data... [ 83%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/googleJobStore.py [AutoAPI] Mapping Data... [ 83%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/conftest.py [AutoAPI] Mapping Data... [ 84%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/abstractJobStore.py [AutoAPI] Mapping Data... [ 84%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/__init__.py [AutoAPI] Mapping Data... [ 85%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/utils.py [AutoAPI] Mapping Data... [ 85%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/jobStore.py [AutoAPI] Mapping Data... [ 86%] /build/reproducible-path/toil-8.0.0/src/toil/jobStores/aws/__init__.py [AutoAPI] Mapping Data... [ 86%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/nonCachingFileStore.py [AutoAPI] Mapping Data... [ 87%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/cachingFileStore.py [AutoAPI] Mapping Data... [ 87%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/abstractFileStore.py [AutoAPI] Mapping Data... [ 88%] /build/reproducible-path/toil-8.0.0/src/toil/fileStores/__init__.py [AutoAPI] Mapping Data... [ 88%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/utils.py [AutoAPI] Mapping Data... [ 89%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/cwltoil.py [AutoAPI] Mapping Data... [ 89%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/conftest.py [AutoAPI] Mapping Data... [ 90%] /build/reproducible-path/toil-8.0.0/src/toil/cwl/__init__.py [AutoAPI] Mapping Data... [ 90%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/torque.py [AutoAPI] Mapping Data... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/slurm.py [AutoAPI] Mapping Data... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/singleMachine.py [AutoAPI] Mapping Data... [ 91%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/registry.py [AutoAPI] Mapping Data... [ 92%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/options.py [AutoAPI] Mapping Data... [ 92%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/lsfHelper.py [AutoAPI] Mapping Data... [ 93%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/lsf.py [AutoAPI] Mapping Data... [ 93%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/local_support.py [AutoAPI] Mapping Data... [ 94%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/kubernetes.py [AutoAPI] Mapping Data... [ 94%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/htcondor.py [AutoAPI] Mapping Data... [ 95%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/gridengine.py [AutoAPI] Mapping Data... [ 95%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/contained_executor.py [AutoAPI] Mapping Data... [ 96%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/cleanup_support.py [AutoAPI] Mapping Data... [ 96%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/awsBatch.py [AutoAPI] Mapping Data... [ 97%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/abstractGridEngineBatchSystem.py [AutoAPI] Mapping Data... [ 97%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/abstractBatchSystem.py [AutoAPI] Mapping Data... [ 98%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/__init__.py [AutoAPI] Mapping Data... [ 98%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/executor.py [AutoAPI] Mapping Data... [ 99%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/conftest.py [AutoAPI] Mapping Data... [ 99%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/batchSystem.py [AutoAPI] Mapping Data... [100%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/__init__.py [AutoAPI] Mapping Data... [100%] /build/reproducible-path/toil-8.0.0/src/toil/batchSystems/mesos/test/__init__.py [AutoAPI] Rendering Data... [ 0%] toil [AutoAPI] Rendering Data... [ 1%] toil.job [AutoAPI] Rendering Data... [ 1%] toil.bus [AutoAPI] Rendering Data... [ 2%] toil.wdl [AutoAPI] Rendering Data... [ 2%] toil.lib [AutoAPI] Rendering Data... [ 3%] toil.cwl [AutoAPI] Rendering Data... [ 3%] toil.test [AutoAPI] Rendering Data... [ 4%] toil.utils [AutoAPI] Rendering Data... [ 4%] toil.worker [AutoAPI] Rendering Data... [ 5%] toil.leader [AutoAPI] Rendering Data... [ 5%] toil.common [AutoAPI] Rendering Data... [ 6%] toil.server [AutoAPI] Rendering Data... [ 6%] toil.lib.io [AutoAPI] Rendering Data... [ 7%] toil.version [AutoAPI] Rendering Data... [ 7%] toil.options [AutoAPI] Rendering Data... [ 8%] toil.lib.ec2 [AutoAPI] Rendering Data... [ 8%] toil.lib.aws [AutoAPI] Rendering Data... [ 9%] toil.resource [AutoAPI] Rendering Data... [ 9%] toil.deferred [AutoAPI] Rendering Data... [ 10%] toil.test.wdl [AutoAPI] Rendering Data... [ 10%] toil.test.src [AutoAPI] Rendering Data... [ 11%] toil.test.lib [AutoAPI] Rendering Data... [ 11%] toil.test.cwl [AutoAPI] Rendering Data... [ 11%] toil.lib.misc [AutoAPI] Rendering Data... [ 12%] toil.toilState [AutoAPI] Rendering Data... [ 12%] toil.wdl.utils [AutoAPI] Rendering Data... [ 13%] toil.test.sort [AutoAPI] Rendering Data... [ 13%] toil.test.docs [AutoAPI] Rendering Data... [ 14%] toil.lib.retry [AutoAPI] Rendering Data... [ 14%] toil.lib.bioio [AutoAPI] Rendering Data... [ 15%] toil.jobStores [AutoAPI] Rendering Data... [ 15%] toil.cwl.utils [AutoAPI] Rendering Data... [ 16%] toil.exceptions [AutoAPI] Rendering Data... [ 16%] toil.test.utils [AutoAPI] Rendering Data... [ 17%] toil.test.mesos [AutoAPI] Rendering Data... [ 17%] toil.server.app [AutoAPI] Rendering Data... [ 18%] toil.server.wes [AutoAPI] Rendering Data... [ 18%] toil.server.cli [AutoAPI] Rendering Data... [ 19%] toil.lib.docker [AutoAPI] Rendering Data... [ 19%] toil.lib.aws.s3 [AutoAPI] Rendering Data... [ 20%] toil.fileStores [AutoAPI] Rendering Data... [ 20%] toil.wdl.wdltoil [AutoAPI] Rendering Data... [ 21%] toil.test.server [AutoAPI] Rendering Data... [ 21%] toil.test.cactus [AutoAPI] Rendering Data... [ 22%] toil.options.wdl [AutoAPI] Rendering Data... [ 22%] toil.options.cwl [AutoAPI] Rendering Data... [ 22%] toil.lib.objects [AutoAPI] Rendering Data... [ 23%] toil.lib.memoize [AutoAPI] Rendering Data... [ 23%] toil.lib.expando [AutoAPI] Rendering Data... [ 24%] toil.lib.aws.iam [AutoAPI] Rendering Data... [ 24%] toil.lib.aws.ami [AutoAPI] Rendering Data... [ 25%] toil.cwl.cwltoil [AutoAPI] Rendering Data... [ 25%] toil.test.options [AutoAPI] Rendering Data... [ 26%] toil.test.lib.aws [AutoAPI] Rendering Data... [ 26%] toil.server.utils [AutoAPI] Rendering Data... [ 27%] toil.provisioners [AutoAPI] Rendering Data... [ 27%] toil.lib.throttle [AutoAPI] Rendering Data... [ 28%] toil.lib.humanize [AutoAPI] Rendering Data... [ 28%] toil.lib.ec2nodes [AutoAPI] Rendering Data... [ 29%] toil.cwl.conftest [AutoAPI] Rendering Data... [ 29%] toil.batchSystems [AutoAPI] Rendering Data... [ 30%] toil.lib.threading [AutoAPI] Rendering Data... [ 30%] toil.lib.resources [AutoAPI] Rendering Data... [ 31%] toil.lib.iterables [AutoAPI] Rendering Data... [ 31%] toil.lib.ftp_utils [AutoAPI] Rendering Data... [ 32%] toil.lib.aws.utils [AutoAPI] Rendering Data... [ 32%] toil.jobStores.aws [AutoAPI] Rendering Data... [ 33%] toil.serviceManager [AutoAPI] Rendering Data... [ 33%] toil.realtimeLogger [AutoAPI] Rendering Data... [ 33%] toil.utils.toilMain [AutoAPI] Rendering Data... [ 34%] toil.utils.toilKill [AutoAPI] Rendering Data... [ 34%] toil.test.sort.sort [AutoAPI] Rendering Data... [ 35%] toil.test.jobStores [AutoAPI] Rendering Data... [ 35%] toil.options.runner [AutoAPI] Rendering Data... [ 36%] toil.options.common [AutoAPI] Rendering Data... [ 36%] toil.lib.exceptions [AutoAPI] Rendering Data... [ 37%] toil.lib.encryption [AutoAPI] Rendering Data... [ 37%] toil.statsAndLogging [AutoAPI] Rendering Data... [ 38%] toil.utils.toilStats [AutoAPI] Rendering Data... [ 38%] toil.utils.toilClean [AutoAPI] Rendering Data... [ 39%] toil.server.wsgi_app [AutoAPI] Rendering Data... [ 39%] toil.server.api_spec [AutoAPI] Rendering Data... [ 40%] toil.lib.integration [AutoAPI] Rendering Data... [ 40%] toil.lib.conversions [AutoAPI] Rendering Data... [ 41%] toil.lib.aws.session [AutoAPI] Rendering Data... [ 41%] toil.jobStores.utils [AutoAPI] Rendering Data... [ 42%] toil.utils.toilStatus [AutoAPI] Rendering Data... [ 42%] toil.utils.toilServer [AutoAPI] Rendering Data... [ 43%] toil.utils.toilConfig [AutoAPI] Rendering Data... [ 43%] toil.test.src.jobTest [AutoAPI] Rendering Data... [ 44%] toil.test.src.busTest [AutoAPI] Rendering Data... [ 44%] toil.test.cwl.cwlTest [AutoAPI] Rendering Data... [ 44%] toil.server.wes.tasks [AutoAPI] Rendering Data... [ 45%] toil.provisioners.aws [AutoAPI] Rendering Data... [ 45%] toil.lib.accelerators [AutoAPI] Rendering Data... [ 46%] toil.batchSystems.lsf [AutoAPI] Rendering Data... [ 46%] toil.test.provisioners [AutoAPI] Rendering Data... [ 47%] toil.test.mesos.stress [AutoAPI] Rendering Data... [ 47%] toil.test.lib.test_ec2 [AutoAPI] Rendering Data... [ 48%] toil.test.cwl.conftest [AutoAPI] Rendering Data... [ 48%] toil.test.batchSystems [AutoAPI] Rendering Data... [ 49%] toil.server.celery_app [AutoAPI] Rendering Data... [ 49%] toil.provisioners.node [AutoAPI] Rendering Data... [ 50%] toil.lib.compatibility [AutoAPI] Rendering Data... [ 50%] toil.utils.toilDebugJob [AutoAPI] Rendering Data... [ 51%] toil.test.src.miscTests [AutoAPI] Rendering Data... [ 51%] toil.test.sort.sortTest [AutoAPI] Rendering Data... [ 52%] toil.test.lib.test_misc [AutoAPI] Rendering Data... [ 52%] toil.jobStores.conftest [AutoAPI] Rendering Data... [ 53%] toil.batchSystems.slurm [AutoAPI] Rendering Data... [ 53%] toil.batchSystems.mesos [AutoAPI] Rendering Data... [ 54%] toil.utils.toilDebugFile [AutoAPI] Rendering Data... [ 54%] toil.test.src.workerTest [AutoAPI] Rendering Data... [ 55%] toil.test.src.systemTest [AutoAPI] Rendering Data... [ 55%] toil.test.lib.dockerTest [AutoAPI] Rendering Data... [ 56%] toil.jobStores.aws.utils [AutoAPI] Rendering Data... [ 56%] toil.batchSystems.torque [AutoAPI] Rendering Data... [ 56%] toil.utils.toilSshCluster [AutoAPI] Rendering Data... [ 57%] toil.test.utils.utilsTest [AutoAPI] Rendering Data... [ 57%] toil.test.options.options [AutoAPI] Rendering Data... [ 58%] toil.test.lib.aws.test_s3 [AutoAPI] Rendering Data... [ 58%] toil.batchSystems.options [AutoAPI] Rendering Data... [ 59%] toil.test.wdl.wdltoil_test [AutoAPI] Rendering Data... [ 59%] toil.test.src.resourceTest [AutoAPI] Rendering Data... [ 60%] toil.test.src.promisesTest [AutoAPI] Rendering Data... [ 60%] toil.test.provisioners.aws [AutoAPI] Rendering Data... [ 61%] toil.test.mesos.helloWorld [AutoAPI] Rendering Data... [ 61%] toil.test.lib.aws.test_iam [AutoAPI] Rendering Data... [ 62%] toil.test.docs.scriptsTest [AutoAPI] Rendering Data... [ 62%] toil.lib.generatedEC2Lists [AutoAPI] Rendering Data... [ 63%] toil.batchSystems.registry [AutoAPI] Rendering Data... [ 63%] toil.batchSystems.htcondor [AutoAPI] Rendering Data... [ 64%] toil.batchSystems.awsBatch [AutoAPI] Rendering Data... [ 64%] toil.utils.toilRsyncCluster [AutoAPI] Rendering Data... [ 65%] toil.test.src.threadingTest [AutoAPI] Rendering Data... [ 65%] toil.test.src.fileStoreTest [AutoAPI] Rendering Data... [ 66%] toil.test.sort.restart_sort [AutoAPI] Rendering Data... [ 66%] toil.test.server.serverTest [AutoAPI] Rendering Data... [ 67%] toil.jobStores.fileJobStore [AutoAPI] Rendering Data... [ 67%] toil.jobStores.aws.jobStore [AutoAPI] Rendering Data... [ 67%] toil.batchSystems.lsfHelper [AutoAPI] Rendering Data... [ 68%] toil.utils.toilLaunchCluster [AutoAPI] Rendering Data... [ 68%] toil.test.utils.toilKillTest [AutoAPI] Rendering Data... [ 69%] toil.test.src.restartDAGTest [AutoAPI] Rendering Data... [ 69%] toil.test.src.regularLogTest [AutoAPI] Rendering Data... [ 70%] toil.test.src.jobServiceTest [AutoAPI] Rendering Data... [ 70%] toil.test.src.helloWorldTest [AutoAPI] Rendering Data... [ 71%] toil.test.src.checkpointTest [AutoAPI] Rendering Data... [ 71%] toil.test.lib.aws.test_utils [AutoAPI] Rendering Data... [ 72%] toil.server.wes.toil_backend [AutoAPI] Rendering Data... [ 72%] toil.lib.encryption.conftest [AutoAPI] Rendering Data... [ 73%] toil.batchSystems.kubernetes [AutoAPI] Rendering Data... [ 73%] toil.batchSystems.gridengine [AutoAPI] Rendering Data... [ 74%] toil.batchSystems.mesos.test [AutoAPI] Rendering Data... [ 74%] toil.utils.toilDestroyCluster [AutoAPI] Rendering Data... [ 75%] toil.test.utils.toilDebugTest [AutoAPI] Rendering Data... [ 75%] toil.test.src.environmentTest [AutoAPI] Rendering Data... [ 76%] toil.test.src.dockerCheckTest [AutoAPI] Rendering Data... [ 76%] toil.jobStores.googleJobStore [AutoAPI] Rendering Data... [ 77%] toil.test.src.resumabilityTest [AutoAPI] Rendering Data... [ 77%] toil.test.src.jobFileStoreTest [AutoAPI] Rendering Data... [ 78%] toil.test.lib.test_integration [AutoAPI] Rendering Data... [ 78%] toil.test.lib.test_conversions [AutoAPI] Rendering Data... [ 78%] toil.server.cli.wes_cwl_runner [AutoAPI] Rendering Data... [ 79%] toil.test.src.retainTempDirTest [AutoAPI] Rendering Data... [ 79%] toil.provisioners.clusterScaler [AutoAPI] Rendering Data... [ 80%] toil.jobStores.abstractJobStore [AutoAPI] Rendering Data... [ 80%] toil.batchSystems.singleMachine [AutoAPI] Rendering Data... [ 81%] toil.batchSystems.local_support [AutoAPI] Rendering Data... [ 81%] toil.test.src.realtimeLoggerTest [AutoAPI] Rendering Data... [ 82%] toil.test.src.jobDescriptionTest [AutoAPI] Rendering Data... [ 82%] toil.test.src.autoDeploymentTest [AutoAPI] Rendering Data... [ 83%] toil.test.jobStores.jobStoreTest [AutoAPI] Rendering Data... [ 83%] toil.server.wes.amazon_wes_utils [AutoAPI] Rendering Data... [ 84%] toil.server.wes.abstract_backend [AutoAPI] Rendering Data... [ 84%] toil.provisioners.gceProvisioner [AutoAPI] Rendering Data... [ 85%] toil.fileStores.cachingFileStore [AutoAPI] Rendering Data... [ 85%] toil.batchSystems.mesos.executor [AutoAPI] Rendering Data... [ 86%] toil.batchSystems.mesos.conftest [AutoAPI] Rendering Data... [ 86%] toil.utils.toilUpdateEC2Instances [AutoAPI] Rendering Data... [ 87%] toil.test.batchSystems.test_slurm [AutoAPI] Rendering Data... [ 87%] toil.fileStores.abstractFileStore [AutoAPI] Rendering Data... [ 88%] toil.batchSystems.cleanup_support [AutoAPI] Rendering Data... [ 88%] toil.test.src.jobEncapsulationTest [AutoAPI] Rendering Data... [ 89%] toil.test.src.importExportFileTest [AutoAPI] Rendering Data... [ 89%] toil.test.src.deferredFunctionTest [AutoAPI] Rendering Data... [ 89%] toil.test.provisioners.clusterTest [AutoAPI] Rendering Data... [ 90%] toil.fileStores.nonCachingFileStore [AutoAPI] Rendering Data... [ 90%] toil.batchSystems.mesos.batchSystem [AutoAPI] Rendering Data... [ 91%] toil.test.src.toilContextManagerTest [AutoAPI] Rendering Data... [ 91%] toil.test.provisioners.restartScript [AutoAPI] Rendering Data... [ 92%] toil.provisioners.aws.awsProvisioner [AutoAPI] Rendering Data... [ 92%] toil.batchSystems.contained_executor [AutoAPI] Rendering Data... [ 93%] toil.test.wdl.wdltoil_test_kubernetes [AutoAPI] Rendering Data... [ 93%] toil.test.src.promisedRequirementTest [AutoAPI] Rendering Data... [ 94%] toil.provisioners.abstractProvisioner [AutoAPI] Rendering Data... [ 94%] toil.batchSystems.abstractBatchSystem [AutoAPI] Rendering Data... [ 95%] toil.test.provisioners.provisionerTest [AutoAPI] Rendering Data... [ 95%] toil.test.batchSystems.test_lsf_helper [AutoAPI] Rendering Data... [ 96%] toil.test.batchSystems.test_gridengine [AutoAPI] Rendering Data... [ 96%] toil.test.batchSystems.batchSystemTest [AutoAPI] Rendering Data... [ 97%] toil.test.src.userDefinedJobArgTypeTest [AutoAPI] Rendering Data... [ 97%] toil.test.mesos.MesosDataStructuresTest [AutoAPI] Rendering Data... [ 98%] toil.test.provisioners.clusterScalerTest [AutoAPI] Rendering Data... [ 98%] toil.test.cactus.test_cactus_integration [AutoAPI] Rendering Data... [ 99%] toil.test.provisioners.gceProvisionerTest [AutoAPI] Rendering Data... [ 99%] toil.test.provisioners.aws.awsProvisionerTest [AutoAPI] Rendering Data... [100%] toil.test.batchSystems.batch_system_plugin_test [AutoAPI] Rendering Data... [100%] toil.batchSystems.abstractGridEngineBatchSystem loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv ... loading intersphinx inventory 'cwltool' from /usr/share/doc/cwltool/html/objects.inv ... building [mo]: targets for 0 po files that are out of date writing output... building [man]: all manpages updating environment: [new config] 246 added, 0 changed, 0 removed reading sources... [ 0%] appendices/architecture reading sources... [ 1%] appendices/aws_min_permissions reading sources... [ 1%] appendices/deploy reading sources... [ 2%] appendices/environment_vars reading sources... [ 2%] autoapi/index reading sources... [ 2%] autoapi/toil/batchSystems/abstractBatchSystem/index reading sources... [ 3%] autoapi/toil/batchSystems/abstractGridEngineBatchSystem/index reading sources... [ 3%] autoapi/toil/batchSystems/awsBatch/index reading sources... [ 4%] autoapi/toil/batchSystems/cleanup_support/index reading sources... [ 4%] autoapi/toil/batchSystems/contained_executor/index reading sources... [ 4%] autoapi/toil/batchSystems/gridengine/index reading sources... [ 5%] autoapi/toil/batchSystems/htcondor/index reading sources... [ 5%] autoapi/toil/batchSystems/index reading sources... [ 6%] autoapi/toil/batchSystems/kubernetes/index reading sources... [ 6%] autoapi/toil/batchSystems/local_support/index reading sources... [ 7%] autoapi/toil/batchSystems/lsf/index reading sources... [ 7%] autoapi/toil/batchSystems/lsfHelper/index reading sources... [ 7%] autoapi/toil/batchSystems/mesos/batchSystem/index reading sources... [ 8%] autoapi/toil/batchSystems/mesos/conftest/index reading sources... [ 8%] autoapi/toil/batchSystems/mesos/executor/index reading sources... [ 9%] autoapi/toil/batchSystems/mesos/index reading sources... [ 9%] autoapi/toil/batchSystems/mesos/test/index reading sources... [ 9%] autoapi/toil/batchSystems/options/index reading sources... [ 10%] autoapi/toil/batchSystems/registry/index reading sources... [ 10%] autoapi/toil/batchSystems/singleMachine/index reading sources... [ 11%] autoapi/toil/batchSystems/slurm/index reading sources... [ 11%] autoapi/toil/batchSystems/torque/index reading sources... [ 11%] autoapi/toil/bus/index reading sources... [ 12%] autoapi/toil/common/index reading sources... [ 12%] autoapi/toil/cwl/conftest/index /usr/lib/python3/dist-packages/cwltool/__init__.py reading sources... [ 13%] autoapi/toil/cwl/cwltoil/index reading sources... [ 13%] autoapi/toil/cwl/index reading sources... [ 13%] autoapi/toil/cwl/utils/index reading sources... [ 14%] autoapi/toil/deferred/index reading sources... [ 14%] autoapi/toil/exceptions/index reading sources... [ 15%] autoapi/toil/fileStores/abstractFileStore/index reading sources... [ 15%] autoapi/toil/fileStores/cachingFileStore/index reading sources... [ 15%] autoapi/toil/fileStores/index reading sources... [ 16%] autoapi/toil/fileStores/nonCachingFileStore/index reading sources... [ 16%] autoapi/toil/index reading sources... [ 17%] autoapi/toil/job/index reading sources... [ 17%] autoapi/toil/jobStores/abstractJobStore/index reading sources... [ 17%] autoapi/toil/jobStores/aws/index reading sources... [ 18%] autoapi/toil/jobStores/aws/jobStore/index reading sources... [ 18%] autoapi/toil/jobStores/aws/utils/index reading sources... [ 19%] autoapi/toil/jobStores/conftest/index /usr/lib/python3/dist-packages/boto3/__init__.py reading sources... [ 19%] autoapi/toil/jobStores/fileJobStore/index reading sources... [ 20%] autoapi/toil/jobStores/googleJobStore/index reading sources... [ 20%] autoapi/toil/jobStores/index reading sources... [ 20%] autoapi/toil/jobStores/utils/index reading sources... [ 21%] autoapi/toil/leader/index reading sources... [ 21%] autoapi/toil/lib/accelerators/index reading sources... [ 22%] autoapi/toil/lib/aws/ami/index reading sources... [ 22%] autoapi/toil/lib/aws/iam/index reading sources... [ 22%] autoapi/toil/lib/aws/index reading sources... [ 23%] autoapi/toil/lib/aws/s3/index reading sources... [ 23%] autoapi/toil/lib/aws/session/index reading sources... [ 24%] autoapi/toil/lib/aws/utils/index reading sources... [ 24%] autoapi/toil/lib/bioio/index reading sources... [ 24%] autoapi/toil/lib/compatibility/index reading sources... [ 25%] autoapi/toil/lib/conversions/index reading sources... [ 25%] autoapi/toil/lib/docker/index reading sources... [ 26%] autoapi/toil/lib/ec2/index reading sources... [ 26%] autoapi/toil/lib/ec2nodes/index reading sources... [ 26%] autoapi/toil/lib/encryption/conftest/index reading sources... [ 27%] autoapi/toil/lib/encryption/index reading sources... [ 27%] autoapi/toil/lib/exceptions/index reading sources... [ 28%] autoapi/toil/lib/expando/index reading sources... [ 28%] autoapi/toil/lib/ftp_utils/index reading sources... [ 28%] autoapi/toil/lib/generatedEC2Lists/index reading sources... [ 29%] autoapi/toil/lib/humanize/index reading sources... [ 29%] autoapi/toil/lib/index reading sources... [ 30%] autoapi/toil/lib/integration/index reading sources... [ 30%] autoapi/toil/lib/io/index reading sources... [ 30%] autoapi/toil/lib/iterables/index reading sources... [ 31%] autoapi/toil/lib/memoize/index reading sources... [ 31%] autoapi/toil/lib/misc/index reading sources... [ 32%] autoapi/toil/lib/objects/index reading sources... [ 32%] autoapi/toil/lib/resources/index reading sources... [ 33%] autoapi/toil/lib/retry/index reading sources... [ 33%] autoapi/toil/lib/threading/index reading sources... [ 33%] autoapi/toil/lib/throttle/index reading sources... [ 34%] autoapi/toil/options/common/index reading sources... [ 34%] autoapi/toil/options/cwl/index reading sources... [ 35%] autoapi/toil/options/index reading sources... [ 35%] autoapi/toil/options/runner/index reading sources... [ 35%] autoapi/toil/options/wdl/index reading sources... [ 36%] autoapi/toil/provisioners/abstractProvisioner/index reading sources... [ 36%] autoapi/toil/provisioners/aws/awsProvisioner/index reading sources... [ 37%] autoapi/toil/provisioners/aws/index reading sources... [ 37%] autoapi/toil/provisioners/clusterScaler/index reading sources... [ 37%] autoapi/toil/provisioners/gceProvisioner/index reading sources... [ 38%] autoapi/toil/provisioners/index reading sources... [ 38%] autoapi/toil/provisioners/node/index reading sources... [ 39%] autoapi/toil/realtimeLogger/index reading sources... [ 39%] autoapi/toil/resource/index reading sources... [ 39%] autoapi/toil/server/api_spec/index reading sources... [ 40%] autoapi/toil/server/app/index reading sources... [ 40%] autoapi/toil/server/celery_app/index reading sources... [ 41%] autoapi/toil/server/cli/index reading sources... [ 41%] autoapi/toil/server/cli/wes_cwl_runner/index reading sources... [ 41%] autoapi/toil/server/index reading sources... [ 42%] autoapi/toil/server/utils/index reading sources... [ 42%] autoapi/toil/server/wes/abstract_backend/index reading sources... [ 43%] autoapi/toil/server/wes/amazon_wes_utils/index reading sources... [ 43%] autoapi/toil/server/wes/index reading sources... [ 43%] autoapi/toil/server/wes/tasks/index reading sources... [ 44%] autoapi/toil/server/wes/toil_backend/index reading sources... [ 44%] autoapi/toil/server/wsgi_app/index reading sources... [ 45%] autoapi/toil/serviceManager/index reading sources... [ 45%] autoapi/toil/statsAndLogging/index reading sources... [ 46%] autoapi/toil/test/batchSystems/batchSystemTest/index reading sources... [ 46%] autoapi/toil/test/batchSystems/batch_system_plugin_test/index reading sources... [ 46%] autoapi/toil/test/batchSystems/index reading sources... [ 47%] autoapi/toil/test/batchSystems/test_gridengine/index reading sources... [ 47%] autoapi/toil/test/batchSystems/test_lsf_helper/index reading sources... [ 48%] autoapi/toil/test/batchSystems/test_slurm/index reading sources... [ 48%] autoapi/toil/test/cactus/index reading sources... [ 48%] autoapi/toil/test/cactus/test_cactus_integration/index reading sources... [ 49%] autoapi/toil/test/cwl/conftest/index reading sources... [ 49%] autoapi/toil/test/cwl/cwlTest/index reading sources... [ 50%] autoapi/toil/test/cwl/index reading sources... [ 50%] autoapi/toil/test/docs/index reading sources... [ 50%] autoapi/toil/test/docs/scriptsTest/index reading sources... [ 51%] autoapi/toil/test/index reading sources... [ 51%] autoapi/toil/test/jobStores/index reading sources... [ 52%] autoapi/toil/test/jobStores/jobStoreTest/index reading sources... [ 52%] autoapi/toil/test/lib/aws/index reading sources... [ 52%] autoapi/toil/test/lib/aws/test_iam/index reading sources... [ 53%] autoapi/toil/test/lib/aws/test_s3/index reading sources... [ 53%] autoapi/toil/test/lib/aws/test_utils/index reading sources... [ 54%] autoapi/toil/test/lib/dockerTest/index reading sources... [ 54%] autoapi/toil/test/lib/index reading sources... [ 54%] autoapi/toil/test/lib/test_conversions/index reading sources... [ 55%] autoapi/toil/test/lib/test_ec2/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 55%] autoapi/toil/test/lib/test_integration/index reading sources... [ 56%] autoapi/toil/test/lib/test_misc/index reading sources... [ 56%] autoapi/toil/test/mesos/MesosDataStructuresTest/index reading sources... [ 57%] autoapi/toil/test/mesos/helloWorld/index reading sources... [ 57%] autoapi/toil/test/mesos/index reading sources... [ 57%] autoapi/toil/test/mesos/stress/index reading sources... [ 58%] autoapi/toil/test/options/index reading sources... [ 58%] autoapi/toil/test/options/options/index reading sources... [ 59%] autoapi/toil/test/provisioners/aws/awsProvisionerTest/index DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (147): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (148): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (149): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (150): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (151): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (152): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (153): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (154): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (155): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (156): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (157): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (158): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (159): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (160): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (161): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (162): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (163): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (164): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (165): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (166): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (167): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (168): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (169): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (170): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (171): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (172): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (173): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (174): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (175): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (176): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (177): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (178): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (179): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (180): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (181): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (182): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (183): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (184): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (185): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (186): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (187): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (188): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (189): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (190): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (191): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (192): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (193): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (194): 127.0.0.1:9 DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (195): 127.0.0.1:9 reading sources... [ 59%] autoapi/toil/test/provisioners/aws/index reading sources... [ 59%] autoapi/toil/test/provisioners/clusterScalerTest/index reading sources... [ 60%] autoapi/toil/test/provisioners/clusterTest/index reading sources... [ 60%] autoapi/toil/test/provisioners/gceProvisionerTest/index INFO:toil:Using default docker registry of quay.io/ucsc_cgl as TOIL_DOCKER_REGISTRY is not set. INFO:toil:Using default docker name of toil as TOIL_DOCKER_NAME is not set. INFO:toil:Using default docker appliance of quay.io/ucsc_cgl/toil:8.0.0-d2ae0ea9ab49f238670dbf6aafd20de7afdd8514-py3.11 as TOIL_APPLIANCE_SELF is not set. reading sources... [ 61%] autoapi/toil/test/provisioners/index reading sources... [ 61%] autoapi/toil/test/provisioners/provisionerTest/index reading sources... [ 61%] autoapi/toil/test/provisioners/restartScript/index reading sources... [ 62%] autoapi/toil/test/server/index reading sources... [ 62%] autoapi/toil/test/server/serverTest/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 63%] autoapi/toil/test/sort/index reading sources... [ 63%] autoapi/toil/test/sort/restart_sort/index reading sources... [ 63%] autoapi/toil/test/sort/sort/index reading sources... [ 64%] autoapi/toil/test/sort/sortTest/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 64%] autoapi/toil/test/src/autoDeploymentTest/index reading sources... [ 65%] autoapi/toil/test/src/busTest/index reading sources... [ 65%] autoapi/toil/test/src/checkpointTest/index reading sources... [ 65%] autoapi/toil/test/src/deferredFunctionTest/index reading sources... [ 66%] autoapi/toil/test/src/dockerCheckTest/index reading sources... [ 66%] autoapi/toil/test/src/environmentTest/index reading sources... [ 67%] autoapi/toil/test/src/fileStoreTest/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 67%] autoapi/toil/test/src/helloWorldTest/index reading sources... [ 67%] autoapi/toil/test/src/importExportFileTest/index reading sources... [ 68%] autoapi/toil/test/src/index reading sources... [ 68%] autoapi/toil/test/src/jobDescriptionTest/index reading sources... [ 69%] autoapi/toil/test/src/jobEncapsulationTest/index reading sources... [ 69%] autoapi/toil/test/src/jobFileStoreTest/index reading sources... [ 70%] autoapi/toil/test/src/jobServiceTest/index reading sources... [ 70%] autoapi/toil/test/src/jobTest/index reading sources... [ 70%] autoapi/toil/test/src/miscTests/index reading sources... [ 71%] autoapi/toil/test/src/promisedRequirementTest/index reading sources... [ 71%] autoapi/toil/test/src/promisesTest/index reading sources... [ 72%] autoapi/toil/test/src/realtimeLoggerTest/index reading sources... [ 72%] autoapi/toil/test/src/regularLogTest/index reading sources... [ 72%] autoapi/toil/test/src/resourceTest/index reading sources... [ 73%] autoapi/toil/test/src/restartDAGTest/index reading sources... [ 73%] autoapi/toil/test/src/resumabilityTest/index reading sources... [ 74%] autoapi/toil/test/src/retainTempDirTest/index reading sources... [ 74%] autoapi/toil/test/src/systemTest/index reading sources... [ 74%] autoapi/toil/test/src/threadingTest/index reading sources... [ 75%] autoapi/toil/test/src/toilContextManagerTest/index reading sources... [ 75%] autoapi/toil/test/src/userDefinedJobArgTypeTest/index reading sources... [ 76%] autoapi/toil/test/src/workerTest/index reading sources... [ 76%] autoapi/toil/test/utils/index reading sources... [ 76%] autoapi/toil/test/utils/toilDebugTest/index reading sources... [ 77%] autoapi/toil/test/utils/toilKillTest/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 77%] autoapi/toil/test/utils/utilsTest/index DEBUG:botocore.hooks:Changing event name from creating-client-class.iot-data to creating-client-class.iot-data-plane DEBUG:botocore.hooks:Changing event name from before-call.apigateway to before-call.api-gateway DEBUG:botocore.hooks:Changing event name from request-created.machinelearning.Predict to request-created.machine-learning.Predict DEBUG:botocore.hooks:Changing event name from before-parameter-build.autoscaling.CreateLaunchConfiguration to before-parameter-build.auto-scaling.CreateLaunchConfiguration DEBUG:botocore.hooks:Changing event name from before-parameter-build.route53 to before-parameter-build.route-53 DEBUG:botocore.hooks:Changing event name from request-created.cloudsearchdomain.Search to request-created.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.autoscaling.CreateLaunchConfiguration.complete-section to docs.*.auto-scaling.CreateLaunchConfiguration.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.logs.CreateExportTask to before-parameter-build.cloudwatch-logs.CreateExportTask DEBUG:botocore.hooks:Changing event name from docs.*.logs.CreateExportTask.complete-section to docs.*.cloudwatch-logs.CreateExportTask.complete-section DEBUG:botocore.hooks:Changing event name from before-parameter-build.cloudsearchdomain.Search to before-parameter-build.cloudsearch-domain.Search DEBUG:botocore.hooks:Changing event name from docs.*.cloudsearchdomain.Search.complete-section to docs.*.cloudsearch-domain.Search.complete-section DEBUG:botocore.utils:IMDS ENDPOINT: http://169.254.169.254/ DEBUG:botocore.credentials:Looking for credentials via: env DEBUG:botocore.credentials:Looking for credentials via: assume-role DEBUG:botocore.credentials:Looking for credentials via: assume-role-with-web-identity DEBUG:botocore.credentials:Looking for credentials via: sso DEBUG:botocore.credentials:Looking for credentials via: shared-credentials-file DEBUG:botocore.credentials:Looking for credentials via: custom-process DEBUG:botocore.credentials:Looking for credentials via: config-file DEBUG:botocore.credentials:Looking for credentials via: ec2-credentials-file DEBUG:botocore.credentials:Looking for credentials via: boto-config DEBUG:botocore.credentials:Looking for credentials via: container-role DEBUG:botocore.credentials:Looking for credentials via: iam-role DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 127.0.0.1:9 reading sources... [ 78%] autoapi/toil/test/wdl/index reading sources... [ 78%] autoapi/toil/test/wdl/wdltoil_test/index reading sources... [ 78%] autoapi/toil/test/wdl/wdltoil_test_kubernetes/index reading sources... [ 79%] autoapi/toil/toilState/index reading sources... [ 79%] autoapi/toil/utils/index reading sources... [ 80%] autoapi/toil/utils/toilClean/index reading sources... [ 80%] autoapi/toil/utils/toilConfig/index reading sources... [ 80%] autoapi/toil/utils/toilDebugFile/index reading sources... [ 81%] autoapi/toil/utils/toilDebugJob/index reading sources... [ 81%] autoapi/toil/utils/toilDestroyCluster/index reading sources... [ 82%] autoapi/toil/utils/toilKill/index reading sources... [ 82%] autoapi/toil/utils/toilLaunchCluster/index reading sources... [ 83%] autoapi/toil/utils/toilMain/index reading sources... [ 83%] autoapi/toil/utils/toilRsyncCluster/index reading sources... [ 83%] autoapi/toil/utils/toilServer/index reading sources... [ 84%] autoapi/toil/utils/toilSshCluster/index reading sources... [ 84%] autoapi/toil/utils/toilStats/index reading sources... [ 85%] autoapi/toil/utils/toilStatus/index reading sources... [ 85%] autoapi/toil/utils/toilUpdateEC2Instances/index reading sources... [ 85%] autoapi/toil/version/index reading sources... [ 86%] autoapi/toil/wdl/index reading sources... [ 86%] autoapi/toil/wdl/utils/index reading sources... [ 87%] autoapi/toil/wdl/wdltoil/index reading sources... [ 87%] autoapi/toil/worker/index reading sources... [ 87%] contributing/checklists reading sources... [ 88%] contributing/contributing reading sources... [ 88%] cwl/introduction reading sources... [ 89%] cwl/running reading sources... [ 89%] gettingStarted/install reading sources... [ 89%] gettingStarted/quickStart reading sources... [ 90%] index [AutoAPI] Adding AutoAPI TOCTree [autoapi/index] to index.rst reading sources... [ 90%] python/developing reading sources... [ 91%] python/toilAPI reading sources... [ 91%] python/toilAPIBatchsystem reading sources... [ 91%] python/toilAPIExceptions reading sources... [ 92%] python/toilAPIFilestore reading sources... [ 92%] python/toilAPIJobFunctions reading sources... [ 93%] python/toilAPIJobstore reading sources... [ 93%] python/toilAPIMethods reading sources... [ 93%] python/toilAPIRunner reading sources... [ 94%] python/toilAPIService reading sources... [ 94%] running/cliOptions reading sources... [ 95%] running/cloud/amazon reading sources... [ 95%] running/cloud/cloud reading sources... [ 96%] running/cloud/clusterUtils reading sources... [ 96%] running/cloud/gce reading sources... [ 96%] running/cloud/kubernetes reading sources... [ 97%] running/debugging reading sources... [ 97%] running/hpcEnvironments reading sources... [ 98%] running/introduction reading sources... [ 98%] running/server/wes reading sources... [ 98%] running/utils reading sources... [ 99%] wdl/conformance reading sources... [ 99%] wdl/developing reading sources... [100%] wdl/introduction reading sources... [100%] wdl/running looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/toil-8.0.0/docs/gettingStarted/install.rst: WARNING: document isn't included in any toctree done preparing documents... done copying assets... copying assets: done writing... toil.1 { gettingStarted/quickStart cwl/introduction cwl/running wdl/introduction wdl/running wdl/developing wdl/conformance running/introduction running/cliOptions running/utils running/debugging running/cloud/cloud running/cloud/clusterUtils running/cloud/kubernetes running/cloud/amazon running/cloud/gce running/hpcEnvironments running/server/wes python/developing python/toilAPI python/toilAPIJobstore python/toilAPIJobFunctions python/toilAPIMethods python/toilAPIRunner python/toilAPIFilestore python/toilAPIBatchsystem python/toilAPIService python/toilAPIExceptions contributing/contributing contributing/checklists appendices/architecture appendices/aws_min_permissions appendices/deploy appendices/environment_vars autoapi/index autoapi/toil/index autoapi/toil/batchSystems/index autoapi/toil/batchSystems/abstractBatchSystem/index autoapi/toil/batchSystems/abstractGridEngineBatchSystem/index autoapi/toil/batchSystems/awsBatch/index autoapi/toil/batchSystems/cleanup_support/index autoapi/toil/batchSystems/contained_executor/index autoapi/toil/batchSystems/gridengine/index autoapi/toil/batchSystems/htcondor/index autoapi/toil/batchSystems/kubernetes/index autoapi/toil/batchSystems/local_support/index autoapi/toil/batchSystems/lsf/index autoapi/toil/batchSystems/lsfHelper/index autoapi/toil/batchSystems/mesos/index autoapi/toil/batchSystems/mesos/batchSystem/index autoapi/toil/batchSystems/mesos/conftest/index autoapi/toil/batchSystems/mesos/executor/index autoapi/toil/batchSystems/mesos/test/index autoapi/toil/batchSystems/options/index autoapi/toil/batchSystems/registry/index autoapi/toil/batchSystems/singleMachine/index autoapi/toil/batchSystems/slurm/index autoapi/toil/batchSystems/torque/index autoapi/toil/bus/index autoapi/toil/common/index autoapi/toil/cwl/index autoapi/toil/cwl/conftest/index autoapi/toil/cwl/cwltoil/index autoapi/toil/cwl/utils/index autoapi/toil/deferred/index autoapi/toil/exceptions/index autoapi/toil/fileStores/index autoapi/toil/fileStores/abstractFileStore/index autoapi/toil/fileStores/cachingFileStore/index autoapi/toil/fileStores/nonCachingFileStore/index autoapi/toil/job/index autoapi/toil/jobStores/index autoapi/toil/jobStores/abstractJobStore/index autoapi/toil/jobStores/aws/index autoapi/toil/jobStores/aws/jobStore/index autoapi/toil/jobStores/aws/utils/index autoapi/toil/jobStores/conftest/index autoapi/toil/jobStores/fileJobStore/index autoapi/toil/jobStores/googleJobStore/index autoapi/toil/jobStores/utils/index autoapi/toil/leader/index autoapi/toil/lib/index autoapi/toil/lib/accelerators/index autoapi/toil/lib/aws/index autoapi/toil/lib/aws/ami/index autoapi/toil/lib/aws/iam/index autoapi/toil/lib/aws/s3/index autoapi/toil/lib/aws/session/index autoapi/toil/lib/aws/utils/index autoapi/toil/lib/bioio/index autoapi/toil/lib/compatibility/index autoapi/toil/lib/conversions/index autoapi/toil/lib/docker/index autoapi/toil/lib/ec2/index autoapi/toil/lib/ec2nodes/index autoapi/toil/lib/encryption/index autoapi/toil/lib/encryption/conftest/index autoapi/toil/lib/exceptions/index autoapi/toil/lib/expando/index autoapi/toil/lib/ftp_utils/index autoapi/toil/lib/generatedEC2Lists/index autoapi/toil/lib/humanize/index autoapi/toil/lib/integration/index autoapi/toil/lib/io/index autoapi/toil/lib/iterables/index autoapi/toil/lib/memoize/index autoapi/toil/lib/misc/index autoapi/toil/lib/objects/index autoapi/toil/lib/resources/index autoapi/toil/lib/retry/index autoapi/toil/lib/threading/index autoapi/toil/lib/throttle/index autoapi/toil/options/index autoapi/toil/options/common/index autoapi/toil/options/cwl/index autoapi/toil/options/runner/index autoapi/toil/options/wdl/index autoapi/toil/provisioners/index autoapi/toil/provisioners/abstractProvisioner/index autoapi/toil/provisioners/aws/index autoapi/toil/provisioners/aws/awsProvisioner/index autoapi/toil/provisioners/clusterScaler/index autoapi/toil/provisioners/gceProvisioner/index autoapi/toil/provisioners/node/index autoapi/toil/realtimeLogger/index autoapi/toil/resource/index autoapi/toil/server/index autoapi/toil/server/api_spec/index autoapi/toil/server/app/index autoapi/toil/server/celery_app/index autoapi/toil/server/cli/index autoapi/toil/server/cli/wes_cwl_runner/index autoapi/toil/server/utils/index autoapi/toil/server/wes/index autoapi/toil/server/wes/abstract_backend/index autoapi/toil/server/wes/amazon_wes_utils/index autoapi/toil/server/wes/tasks/index autoapi/toil/server/wes/toil_backend/index autoapi/toil/server/wsgi_app/index autoapi/toil/serviceManager/index autoapi/toil/statsAndLogging/index autoapi/toil/test/index autoapi/toil/test/batchSystems/index autoapi/toil/test/batchSystems/batchSystemTest/index autoapi/toil/test/batchSystems/batch_system_plugin_test/index autoapi/toil/test/batchSystems/test_gridengine/index autoapi/toil/test/batchSystems/test_lsf_helper/index autoapi/toil/test/batchSystems/test_slurm/index autoapi/toil/test/cactus/index autoapi/toil/test/cactus/test_cactus_integration/index autoapi/toil/test/cwl/index autoapi/toil/test/cwl/conftest/index autoapi/toil/test/cwl/cwlTest/index autoapi/toil/test/docs/index autoapi/toil/test/docs/scriptsTest/index autoapi/toil/test/jobStores/index autoapi/toil/test/jobStores/jobStoreTest/index autoapi/toil/test/lib/index autoapi/toil/test/lib/aws/index autoapi/toil/test/lib/aws/test_iam/index autoapi/toil/test/lib/aws/test_s3/index autoapi/toil/test/lib/aws/test_utils/index autoapi/toil/test/lib/dockerTest/index autoapi/toil/test/lib/test_conversions/index autoapi/toil/test/lib/test_ec2/index autoapi/toil/test/lib/test_integration/index autoapi/toil/test/lib/test_misc/index autoapi/toil/test/mesos/index autoapi/toil/test/mesos/MesosDataStructuresTest/index autoapi/toil/test/mesos/helloWorld/index autoapi/toil/test/mesos/stress/index autoapi/toil/test/options/index autoapi/toil/test/options/options/index autoapi/toil/test/provisioners/index autoapi/toil/test/provisioners/aws/index autoapi/toil/test/provisioners/aws/awsProvisionerTest/index autoapi/toil/test/provisioners/clusterScalerTest/index autoapi/toil/test/provisioners/clusterTest/index autoapi/toil/test/provisioners/gceProvisionerTest/index autoapi/toil/test/provisioners/provisionerTest/index autoapi/toil/test/provisioners/restartScript/index autoapi/toil/test/server/index autoapi/toil/test/server/serverTest/index autoapi/toil/test/sort/index autoapi/toil/test/sort/restart_sort/index autoapi/toil/test/sort/sort/index autoapi/toil/test/sort/sortTest/index autoapi/toil/test/src/index autoapi/toil/test/src/autoDeploymentTest/index autoapi/toil/test/src/busTest/index autoapi/toil/test/src/checkpointTest/index autoapi/toil/test/src/deferredFunctionTest/index autoapi/toil/test/src/dockerCheckTest/index autoapi/toil/test/src/environmentTest/index autoapi/toil/test/src/fileStoreTest/index autoapi/toil/test/src/helloWorldTest/index autoapi/toil/test/src/importExportFileTest/index autoapi/toil/test/src/jobDescriptionTest/index autoapi/toil/test/src/jobEncapsulationTest/index autoapi/toil/test/src/jobFileStoreTest/index autoapi/toil/test/src/jobServiceTest/index autoapi/toil/test/src/jobTest/index autoapi/toil/test/src/miscTests/index autoapi/toil/test/src/promisedRequirementTest/index autoapi/toil/test/src/promisesTest/index autoapi/toil/test/src/realtimeLoggerTest/index autoapi/toil/test/src/regularLogTest/index autoapi/toil/test/src/resourceTest/index autoapi/toil/test/src/restartDAGTest/index autoapi/toil/test/src/resumabilityTest/index autoapi/toil/test/src/retainTempDirTest/index autoapi/toil/test/src/systemTest/index autoapi/toil/test/src/threadingTest/index autoapi/toil/test/src/toilContextManagerTest/index autoapi/toil/test/src/userDefinedJobArgTypeTest/index autoapi/toil/test/src/workerTest/index autoapi/toil/test/utils/index autoapi/toil/test/utils/toilDebugTest/index autoapi/toil/test/utils/toilKillTest/index autoapi/toil/test/utils/utilsTest/index autoapi/toil/test/wdl/index autoapi/toil/test/wdl/wdltoil_test/index autoapi/toil/test/wdl/wdltoil_test_kubernetes/index autoapi/toil/toilState/index autoapi/toil/utils/index autoapi/toil/utils/toilClean/index autoapi/toil/utils/toilConfig/index autoapi/toil/utils/toilDebugFile/index autoapi/toil/utils/toilDebugJob/index autoapi/toil/utils/toilDestroyCluster/index autoapi/toil/utils/toilKill/index autoapi/toil/utils/toilLaunchCluster/index autoapi/toil/utils/toilMain/index autoapi/toil/utils/toilRsyncCluster/index autoapi/toil/utils/toilServer/index autoapi/toil/utils/toilSshCluster/index autoapi/toil/utils/toilStats/index autoapi/toil/utils/toilStatus/index autoapi/toil/utils/toilUpdateEC2Instances/index autoapi/toil/version/index autoapi/toil/wdl/index autoapi/toil/wdl/utils/index autoapi/toil/wdl/wdltoil/index autoapi/toil/worker/index } /build/reproducible-path/toil-8.0.0/docs/gettingStarted/quickStart.rst:506: WARNING: "table row spanning" not supported [docutils] done build succeeded, 2 warnings. The manual pages are in _build/man. make[2]: Leaving directory '/build/reproducible-path/toil-8.0.0/docs' make[1]: Leaving directory '/build/reproducible-path/toil-8.0.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/toil-8.0.0' TOIL_SKIP_ONLINE=true TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True dh_auto_test I: pybuild base:311: cd /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build; python3.13 -m pytest -n 12 --dist loadscope -vv -W ignore -k "not (testVirtualEnv or DockstoreLookupTest or testMultiplejobs)" -m "not slow" --ignore toil/test/lib/aws/test_s3.py --ignore toil/test/provisioners/aws/awsProvisionerTest.py --ignore toil/test/wdl/wdltoil_test.py --ignore toil/test/cwl/cwlTest.py --ignore toil/test/lib/test_ec2.py --ignore toil/test/batchSystems/batchSystemTest.py --ignore toil/test/lib/aws/test_iam.py --ignore toil/test/provisioners/clusterTest.py --ignore toil/test/wdl/wdltoil_test_kubernetes.py --ignore toil/test/cactus/test_cactus_integration.py toil/test ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 cachedir: .pytest_cache rootdir: /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build configfile: setup.cfg plugins: xdist-3.6.1, typeguard-4.4.2 created: 12/12 workers 12 workers [361 items] scheduling tests via LoadScopeScheduling toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser toil/test/lib/dockerTest.py::DockerTest::testDockerClean [gw5] [ 0%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate [gw1] [ 0%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_many_all_exist [gw7] [ 0%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo [gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo [gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_and_cancel_workflows [gw11] [ 1%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_and_cancel_workflows toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url [gw11] [ 1%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip [gw11] [ 2%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip [gw11] [ 2%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip [gw11] [ 2%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag [gw7] [ 3%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag [gw7] [ 3%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia [gw1] [ 3%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality [gw1] [ 3%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence [gw1] [ 4%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable [gw1] [ 4%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob [gw1] [ 4%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportFtpFile [gw1] [ 4%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile [gw1] [ 5%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState [gw1] [ 5%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation [gw1] [ 5%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions [gw1] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality [gw1] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultiThreadImportFile [gw1] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultiThreadImportFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob [gw1] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream [gw1] [ 7%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream [gw10] [ 7%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url [gw10] [ 7%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip [gw10] [ 8%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip [gw10] [ 8%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip [gw10] [ 8%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip [gw10] [ 8%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip [gw10] [ 9%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url [gw10] [ 9%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails [gw10] [ 9%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip [gw11] [ 9%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip [gw11] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url [gw11] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails [gw11] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate [gw2] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality [gw2] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality [gw2] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionIdempotence [gw2] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionIdempotence toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testEmptyFileStoreIDIsReadable [gw2] [ 12%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testEmptyFileStoreIDIsReadable toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob [gw7] [ 12%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag [gw7] [ 12%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo [gw7] [ 13%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo [gw7] [ 13%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo [gw7] [ 13%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo [gw5] [ 13%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM [gw5] [ 14%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP [gw5] [ 14%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP toil/test/lib/dockerTest.py::DockerTest::testDockerLogs [gw5] [ 14%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux [gw5] [ 14%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream [gw5] [ 15%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream [gw5] [ 15%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain [gw5] [ 15%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection [gw5] [ 16%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain [gw5] [ 16%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain [gw2] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportFtpFile [gw2] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportHttpFile [gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportHttpFile toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState [gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation [gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions [gw2] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality [gw2] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_and_cancel_workflows [gw9] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_and_cancel_workflows toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_https_url [gw9] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_https_url toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_inputs_zip [gw9] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_inputs_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_and_inputs_zip [gw9] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_and_inputs_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_zip [gw9] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip [gw9] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip [gw9] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url [gw9] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url [gw2] [ 20%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles [gw2] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails [gw9] [ 21%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles [gw1] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete [gw1] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteFileStreamTextMode [gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteFileStreamTextMode toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteSharedFilesTextMode [gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteSharedFilesTextMode toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation [gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles [gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging [gw1] [ 23%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior [gw1] [ 23%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles [gw1] [ 23%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles [gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py [gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw1] [ 25%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw1] [ 25%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw1] [ 25%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py [gw1] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw1] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw1] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw1] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw1] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete [gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode [gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode [gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles [gw2] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging [gw1] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw2] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip [gw11] [ 29%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior [gw2] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles [gw2] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles [gw2] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo [gw7] [ 30%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo toil/test/src/miscTests.py::MiscTests::testIDStability toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection [gw5] [ 30%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip [gw10] [ 30%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode [gw10] [ 31%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime [gw7] [ 31%] PASSED toil/test/src/miscTests.py::MiscTests::testIDStability toil/test/src/miscTests.py::MiscTests::test_atomic_context_error [gw7] [ 31%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_error [gw2] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw2] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok [gw7] [ 33%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok toil/test/src/miscTests.py::MiscTests::test_atomic_install [gw7] [ 33%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py [gw1] [ 34%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility [gw7] [ 34%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev toil/test/src/miscTests.py::MiscTests::test_call_command_err toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip [gw9] [ 34%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag [gw9] [ 34%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags [gw9] [ 35%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags [gw9] [ 35%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji [gw9] [ 35%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji [gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw2] [ 37%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw2] [ 37%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw7] [ 37%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_err toil/test/src/miscTests.py::MiscTests::test_call_command_ok toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_object [gw9] [ 37%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_object toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility [gw9] [ 38%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode [gw8] [ 38%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMaxNodes [gw2] [ 38%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py toil/test/src/resourceTest.py::ResourceTest::testBuiltIn [gw9] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken [gw9] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility [gw9] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility [gw3] [ 39%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_many_all_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists [gw0] [ 40%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality [gw3] [ 40%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_not_exists [gw7] [ 40%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_ok toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility [gw7] [ 40%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testReadWriteFileStreamTextMode [gw7] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken [gw7] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility [gw7] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions [gw9] [ 42%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths [gw8] [ 42%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMaxNodes toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMinNodes [gw3] [ 42%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_exists [gw0] [ 42%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality [gw8] [ 43%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMinNodes toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testNoLaunchingIfDeltaAlreadyMet [gw3] [ 43%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_not_exists toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions [gw7] [ 43%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions toil/test/src/miscTests.py::TestPanic::test_nested_panic [gw7] [ 44%] PASSED toil/test/src/miscTests.py::TestPanic::test_nested_panic toil/test/src/miscTests.py::TestPanic::test_panic [gw7] [ 44%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic toil/test/src/miscTests.py::TestPanic::test_panic_by_hand [gw7] [ 44%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_by_hand [gw3] [ 44%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_some_exists [gw8] [ 45%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testNoLaunchingIfDeltaAlreadyMet toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitIsSet [gw0] [ 45%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary [gw7] [ 45%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist [gw3] [ 45%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_some_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_all_exist [gw8] [ 46%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitIsSet toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitResponse [gw0] [ 46%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable [gw3] [ 46%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_all_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_none_exist [gw8] [ 47%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitResponse toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testRounding [gw0] [ 47%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob [gw3] [ 47%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_none_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist [gw0] [ 47%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportFtpFile [gw7] [ 48%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists [gw2] [ 48%] PASSED toil/test/src/resourceTest.py::ResourceTest::testBuiltIn toil/test/src/resourceTest.py::ResourceTest::testNonPyStandAlone [gw8] [ 48%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testRounding toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large [gw7] [ 49%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists [gw3] [ 49%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_exists toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running [gw8] [ 49%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_observed [gw3] [ 49%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists [gw8] [ 50%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_observed [gw7] [ 50%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running toil/test/lib/test_conversions.py::ConversionTest::test_convert [gw7] [ 50%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_convert toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds [gw7] [ 50%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds [gw10] [ 51%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes [gw10] [ 51%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes [gw7] [ 51%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small [gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_all_exist [gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_all_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_none_exist [gw8] [ 52%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info [gw8] [ 52%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health [gw8] [ 53%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home [gw8] [ 53%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore [gw3] [ 53%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_none_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_some_exist [gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_some_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_exists [gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_not_exists [gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_exists [gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_not_exists [gw7] [ 55%] PASSED toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file [gw7] [ 55%] PASSED toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file [gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_exists toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path [gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_not_exists [gw3] [ 56%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_not_exists toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects [gw10] [ 56%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime [gw10] [ 56%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPackingOneShape [gw10] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPackingOneShape toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPathologicalCase [gw10] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPathologicalCase toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testSorting [gw10] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testSorting toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testZeroResourceJobs [gw10] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testZeroResourceJobs toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects [gw10] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore [gw10] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py [gw10] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain [gw0] [ 59%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile [gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testNonPyStandAlone toil/test/src/resourceTest.py::ResourceTest::testPackage [gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testPackage toil/test/src/resourceTest.py::ResourceTest::testStandAlone [gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAlone toil/test/src/resourceTest.py::ResourceTest::testStandAloneInPackage [gw2] [ 60%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAloneInPackage toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info [gw10] [ 60%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction [gw0] [ 60%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testInitialState [gw8] [ 60%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore [gw4] [ 61%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker [gw4] [ 61%] SKIPPED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic [gw5] [ 61%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever [gw6] [ 62%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility [gw9] [ 62%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod [gw5] [ 62%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError [gw10] [ 62%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain [gw11] [ 63%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF [gw11] [ 63%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF [gw2] [ 63%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory [gw2] [ 63%] SKIPPED toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job [gw9] [ 64%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda [gw10] [ 64%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain toil/test/__init__.py::toil.test.make_tests [gw10] [ 64%] PASSED toil/test/__init__.py::toil.test.make_tests toil/test/__init__.py::toil.test.timeLimit [gw10] [ 65%] PASSED toil/test/__init__.py::toil.test.timeLimit toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription [gw10] [ 65%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing [gw10] [ 65%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testAddChildEncapsulate [gw10] [ 65%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testAddChildEncapsulate toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testEncapsulation [gw3] [ 66%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore [gw9] [ 66%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod [gw7] [ 66%] PASSED toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path toil/test/src/jobTest.py::JobTest::testDAGConsistency [gw5] [ 67%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError [gw11] [ 67%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF [gw11] [ 67%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog [gw9] [ 67%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export [gw9] [ 68%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false [gw8] [ 68%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore [gw5] [ 68%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError [gw2] [ 68%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store [gw2] [ 69%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths [gw2] [ 69%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths toil/test/lib/test_misc.py::UserNameAvailableTest::test_get_user_name [gw2] [ 69%] PASSED toil/test/lib/test_misc.py::UserNameAvailableTest::test_get_user_name toil/test/lib/test_misc.py::UserNameUnvailableTest::test_get_user_name [gw2] [ 70%] PASSED toil/test/lib/test_misc.py::UserNameUnvailableTest::test_get_user_name toil/test/lib/test_misc.py::UserNameVeryBrokenTest::test_get_user_name [gw2] [ 70%] PASSED toil/test/lib/test_misc.py::UserNameVeryBrokenTest::test_get_user_name toil/test/mesos/MesosDataStructuresTest.py::DataStructuresTest::testJobQueue [gw2] [ 70%] PASSED toil/test/mesos/MesosDataStructuresTest.py::DataStructuresTest::testJobQueue toil/test/provisioners/provisionerTest.py::ProvisionerTest::test_node_type_parsing [gw2] [ 70%] PASSED toil/test/provisioners/provisionerTest.py::ProvisionerTest::test_node_type_parsing toil/test/server/serverTest.py::ToilServerUtilsTest::test_workflow_canceling_recovery [gw2] [ 71%] SKIPPED toil/test/server/serverTest.py::ToilServerUtilsTest::test_workflow_canceling_recovery toil/test/server/serverTest.py::FileStateStoreTest::test_state_store [gw2] [ 71%] SKIPPED toil/test/server/serverTest.py::FileStateStoreTest::test_state_store toil/test/server/serverTest.py::FileStateStoreURLTest::test_state_store [gw2] [ 71%] SKIPPED toil/test/server/serverTest.py::FileStateStoreURLTest::test_state_store toil/test/src/checkpointTest.py::CheckpointTest::testCheckpointNotRetried [gw9] [ 72%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false toil/test/batchSystems/batch_system_plugin_test.py::BatchSystemPluginTest::test_batchsystem_plugin_installable [gw9] [ 72%] PASSED toil/test/batchSystems/batch_system_plugin_test.py::BatchSystemPluginTest::test_batchsystem_plugin_installable toil/test/batchSystems/test_lsf_helper.py::LSFHelperTest::test_parse_mem_and_cmd_from_output [gw9] [ 72%] PASSED toil/test/batchSystems/test_lsf_helper.py::LSFHelperTest::test_parse_mem_and_cmd_from_output toil/test/src/jobServiceTest.py::JobServiceTest::testServiceWithCheckpoints [gw9] [ 72%] SKIPPED toil/test/src/jobServiceTest.py::JobServiceTest::testServiceWithCheckpoints toil/test/src/jobServiceTest.py::PerfectServiceTest::testServiceWithCheckpoints [gw9] [ 73%] SKIPPED toil/test/src/jobServiceTest.py::PerfectServiceTest::testServiceWithCheckpoints toil/test/src/promisesTest.py::CachedUnpicklingJobStoreTest::test [gw8] [ 73%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore toil/test/options/options.py::OptionsTest::test_caching_option_priority [gw8] [ 73%] PASSED toil/test/options/options.py::OptionsTest::test_caching_option_priority toil/test/options/options.py::OptionsTest::test_default_caching_slurm [gw8] [ 73%] PASSED toil/test/options/options.py::OptionsTest::test_default_caching_slurm toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger [gw10] [ 74%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testEncapsulation toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog [gw8] [ 74%] PASSED toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining [gw5] [ 74%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess [gw3] [ 75%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py [gw7] [ 75%] PASSED toil/test/src/jobTest.py::JobTest::testDAGConsistency toil/test/src/jobTest.py::JobTest::testDeadlockDetection [gw11] [ 75%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute [gw9] [ 75%] PASSED toil/test/src/promisesTest.py::CachedUnpicklingJobStoreTest::test toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test [gw10] [ 76%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs [gw7] [ 76%] PASSED toil/test/src/jobTest.py::JobTest::testDeadlockDetection toil/test/src/jobTest.py::JobTest::testStatic2 [gw5] [ 76%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName [gw5] [ 77%] SKIPPED toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName toil/test/utils/toilKillTest.py::ToilKillTest::test_cwl_toil_kill [gw2] [ 77%] PASSED toil/test/src/checkpointTest.py::CheckpointTest::testCheckpointNotRetried toil/test/src/environmentTest.py::EnvironmentTest::test_environment [gw9] [ 77%] PASSED toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test toil/test/src/promisesTest.py::PathIndexingPromiseTest::test [gw4] [ 77%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation [gw1] [ 78%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility [gw7] [ 78%] PASSED toil/test/src/jobTest.py::JobTest::testStatic2 toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill [gw7] [ 78%] SKIPPED toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill [gw10] [ 78%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs toil/test/src/workerTest.py::WorkerTests::testNextChainable [gw10] [ 79%] PASSED toil/test/src/workerTest.py::WorkerTests::testNextChainable [gw5] [ 79%] PASSED toil/test/utils/toilKillTest.py::ToilKillTest::test_cwl_toil_kill [gw9] [ 79%] PASSED toil/test/src/promisesTest.py::PathIndexingPromiseTest::test [gw8] [ 80%] PASSED toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames [gw4] [ 80%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 [gw6] [ 80%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCachHitFileFromJobStore [gw1] [ 80%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken [gw3] [ 81%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering [gw0] [ 81%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobCreation [gw0] [ 81%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobCreation toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobDeletions [gw6] [ 81%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCachHitFileFromJobStore toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile [gw4] [ 82%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld [gw6] [ 82%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile [gw8] [ 82%] PASSED toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles [gw3] [ 83%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding [gw6] [ 83%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode [gw1] [ 83%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility [gw4] [ 83%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow [gw2] [ 84%] PASSED toil/test/src/environmentTest.py::EnvironmentTest::test_environment toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld [gw3] [ 84%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding [gw6] [ 84%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testSimultaneousReadsUncachedStream [gw4] [ 85%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 [gw11] [ 85%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport [gw8] [ 85%] PASSED toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles [gw1] [ 85%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions [gw2] [ 86%] PASSED toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld [gw4] [ 86%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testJobFunctions [gw11] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport toil/test/utils/utilsTest.py::UtilsTest::test_config_functionality [gw11] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::test_config_functionality [gw4] [ 87%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testJobFunctions toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging [gw4] [ 87%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging2 [gw4] [ 87%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises [gw1] [ 88%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions [gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises2 [gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testQuickstart [gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testQuickstart toil/test/docs/scriptsTest.py::ToilDocumentationTest::testRequirements [gw4] [ 89%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testRequirements toil/test/docs/scriptsTest.py::ToilDocumentationTest::testServices [gw0] [ 89%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobDeletions toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobLoadEquality [gw0] [ 89%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobLoadEquality toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPartialReadFromStream [gw0] [ 90%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPartialReadFromStream toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPerJobFiles [gw0] [ 90%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPerJobFiles toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPersistantFilesToDelete [gw0] [ 90%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPersistantFilesToDelete toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPreserveFileName [gw0] [ 90%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPreserveFileName toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testReadWriteFileStreamTextMode [gw0] [ 91%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testReadWriteFileStreamTextMode toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testReadWriteSharedFilesTextMode [gw0] [ 91%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testReadWriteSharedFilesTextMode toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testSharedFiles [gw0] [ 91%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testSharedFiles toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testStatsAndLogging [gw0] [ 91%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testStatsAndLogging toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testUpdateBehavior [gw0] [ 92%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testUpdateBehavior toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testWriteLogFiles [gw0] [ 92%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testWriteLogFiles toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testZeroLengthFiles [gw0] [ 92%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testZeroLengthFiles toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_file_link_imports [gw0] [ 93%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_file_link_imports toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_jobstore_does_not_leak_symlinks [gw0] [ 93%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_jobstore_does_not_leak_symlinks toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_jobstore_init_preserves_symlink_path [gw0] [ 93%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_jobstore_init_preserves_symlink_path toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_symlink_read_control [gw0] [ 93%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_symlink_read_control toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py [gw0] [ 94%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw0] [ 94%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw0] [ 94%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw0] [ 95%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw0] [ 95%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw0] [ 95%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py [gw0] [ 95%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py [gw0] [ 96%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py [gw0] [ 96%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py [gw0] [ 96%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py [gw0] [ 96%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py [gw0] [ 97%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py [gw0] [ 97%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py [gw4] [ 97%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testServices toil/test/docs/scriptsTest.py::ToilDocumentationTest::testStaging [gw4] [ 98%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testStaging toil/test/docs/scriptsTest.py::ToilDocumentationTest::testStats [gw4] [ 98%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testStats [gw6] [ 98%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testSimultaneousReadsUncachedStream toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testToilIsNotBroken [gw6] [ 98%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testToilIsNotBroken toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility [gw6] [ 99%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteLocalFileToJobStore [gw6] [ 99%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteLocalFileToJobStore toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteNonLocalFileToJobStore [gw6] [ 99%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteNonLocalFileToJobStore toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions [gw6] [100%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions ================= 206 passed, 155 skipped in 333.10s (0:05:33) ================= I: pybuild pybuild:334: find /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build \( -name fileToSort.txt -o -name sortedFile.txt -o -name 'kind-explode_*' \) -print -delete ; find /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build -name "jobstore-test*" | xargs rm -Rf /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/sortedFile.txt /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/fileToSort.txt /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/kind-explode_instance-wjwmkeg8_fileset.txt make[1]: Leaving directory '/build/reproducible-path/toil-8.0.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/toil/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/toil-8.0.0' find /build/reproducible-path/toil-8.0.0/debian -name cwltoil -delete # remove the below once mesos is packaged and tested find /build/reproducible-path/toil-8.0.0/debian -name _toil_mesos_executor -delete make[1]: Leaving directory '/build/reproducible-path/toil-8.0.0' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 pydist:339: Ignoring complex environment marker: graphlib_backport==1.0; python_version < "3.9" and extra == "wdl" I: dh_python3 pydist:339: Ignoring complex environment marker: htcondor<25,>=23.6.0; sys_platform != "darwin" and extra == "htcondor" I: dh_python3 pydist:339: Ignoring complex environment marker: pymesos<0.4,>=0.3.15; python_version < "3.11" and extra == "mesos" I: dh_python3 pydist:339: Ignoring complex environment marker: graphlib_backport==1.0; python_version < "3.9" and extra == "all" I: dh_python3 pydist:339: Ignoring complex environment marker: pymesos<0.4,>=0.3.15; python_version < "3.11" and extra == "all" dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'toil' in '../toil_8.0.0-4_all.deb'. dpkg-genbuildinfo --build=binary -O../toil_8.0.0-4_arm64.buildinfo dpkg-genchanges --build=binary -O../toil_8.0.0-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from toil-8.0.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2483255 and its subdirectories I: Current time: Fri Mar 21 12:21:27 -12 2025 I: pbuilder-time-stamp: 1742602887 Sat Mar 22 00:21:29 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sat Mar 22 00:21:29 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sat Mar 22 00:37:25 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sat Mar 22 00:37:26 UTC 2025 I: toil_8.0.0-4_arm64.changes: Format: 1.8 Date: Fri, 21 Mar 2025 17:28:28 +0100 Source: toil Binary: toil Architecture: all Version: 8.0.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: toil - cross-platform workflow engine Changes: toil (8.0.0-4) unstable; urgency=medium . * d/rules: skip the slow tests * d/patches/needs_aws-proxyfix: forwarded upstream Checksums-Sha1: 49769d09b8b9d7519b85d2721557030405519dbd 999240 toil_8.0.0-4_all.deb e42c517c01cdee7263bbc493935237524edbb505 11442 toil_8.0.0-4_arm64.buildinfo Checksums-Sha256: 8a4b46efadbb13cdd2055163714d513c0ac6f2fcb64896204411ae96201fcb9d 999240 toil_8.0.0-4_all.deb d715203c93a314db624b5a1ec11bb0cdab234b02f7d75ea1748f1b0098ad2afa 11442 toil_8.0.0-4_arm64.buildinfo Files: 11d978cbcf38be77db183a20b4ad3cd8 999240 net optional toil_8.0.0-4_all.deb df066c20399af2e66f949917e962df19 11442 net optional toil_8.0.0-4_arm64.buildinfo Sat Mar 22 00:37:27 UTC 2025 I: diffoscope 289 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_11-90126.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/toil_8.0.0-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/toil_8.0.0-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/toil_8.0.0-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/b1/toil_8.0.0-4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.DHRAiUal/b2/toil_8.0.0-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.007s) 0.007s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 428ms CPU time consumed: 420ms Sat Mar 22 00:37:28 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists. Sat Mar 22 00:37:28 UTC 2025 I: toil from unstable built successfully and reproducibly on arm64. Sat Mar 22 00:37:29 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Mar 22 00:37:29 UTC 2025 I: Submitting 16K b1/toil_8.0.0-4_arm64.buildinfo.asc Sat Mar 22 00:37:29 UTC 2025 I: Submitting 16K b2/toil_8.0.0-4_arm64.buildinfo.asc Sat Mar 22 00:37:31 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Mar 22 00:37:31 UTC 2025 I: Done submitting .buildinfo files. Sat Mar 22 00:37:31 UTC 2025 I: Removing signed toil_8.0.0-4_arm64.buildinfo.asc files: removed './b1/toil_8.0.0-4_arm64.buildinfo.asc' removed './b2/toil_8.0.0-4_arm64.buildinfo.asc'