Wed Mar 19 08:03:08 UTC 2025 I: starting to build pymatgen/unstable/armhf on jenkins on '2025-03-19 08:02'
Wed Mar 19 08:03:08 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_8/14527/console.log
Wed Mar 19 08:03:08 UTC 2025 I: Downloading source for unstable/pymatgen=2025.2.18+dfsg1-4
--2025-03-19 08:03:09-- http://deb.debian.org/debian/pool/main/p/pymatgen/pymatgen_2025.2.18%2bdfsg1-4.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 3207 (3.1K) [text/prs.lines.tag]
Saving to: ‘pymatgen_2025.2.18+dfsg1-4.dsc’
0K ... 100% 370M=0s
2025-03-19 08:03:09 (370 MB/s) - ‘pymatgen_2025.2.18+dfsg1-4.dsc’ saved [3207/3207]
Wed Mar 19 08:03:09 UTC 2025 I: pymatgen_2025.2.18+dfsg1-4.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: pymatgen
Binary: python3-pymatgen, python-pymatgen-doc
Architecture: any all
Version: 2025.2.18+dfsg1-4
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders: Drew Parsons <dparsons@debian.org>
Homepage: https://pymatgen.org/
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/debichem-team/pymatgen
Vcs-Git: https://salsa.debian.org/debichem-team/pymatgen.git
Testsuite: autopkgtest
Testsuite-Triggers: @builddeps@, packmol, python3-all
Build-Depends: debhelper-compat (= 13), pymatgen-test-files (>= 2025.2.18~) <!nocheck>, dh-python, dh-sequence-python3, cython3, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-pytest, python3-frozendict, python3-matplotlib (>= 3.8~), python3-monty (>= 2025.1.9~), python3-networkx (>= 3~), python3-numpy (>= 1.25.0~), python3-palettable (>= 3.3.3~), python3-pandas (>= 2~), python3-plotly (>= 5.0.0~), python3-pybtex (>= 0.24.0~), python3-requests (>= 2.32~), python3-ruamel.yaml (>= 0.17.0~), python3-scipy (>= 1.13.0~), python3-spglib (>= 2.5.0~), python3-sympy (>= 1.6.2~), python3-tabulate (>= 0.9~), python3-tqdm (>= 4.60~), python3-uncertainties (>= 3.1.4~), python3-joblib (>= 1~), python3-ase (>= 3.23.0~), python3-bs4 (>= 4.9.1~), python3-vtk9 | python3-paraview, python3-h5py (>= 3.11.0~), python3-netcdf4 (>= 1.6.5~), python3-phonopy (>= 2.33.3~), python3-openbabel (>= 3.1.1~), packmol [!armel !riscv64] <!nocheck>
Build-Depends-Indep: dh-sequence-sphinxdoc <!nodoc>, libjs-jquery <!nodoc>, libjs-mathjax <!nodoc>, python3-sphinx-rtd-theme <!nodoc>
Package-List:
python-pymatgen-doc deb doc optional arch=all
python3-pymatgen deb python optional arch=any
Checksums-Sha1:
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Checksums-Sha256:
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Files:
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146030da807a885094c4d66d069dd64d 17056 pymatgen_2025.2.18+dfsg1-4.debian.tar.xz
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Wed Mar 19 08:03:09 UTC 2025 I: Checking whether the package is not for us
Wed Mar 19 08:03:09 UTC 2025 I: Starting 1st build on remote node virt64a-armhf-rb.debian.net.
Wed Mar 19 08:03:09 UTC 2025 I: Preparing to do remote build '1' on virt64a-armhf-rb.debian.net.
Wed Mar 19 10:03:06 UTC 2025 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Tue Mar 18 20:03:19 -12 2025
I: pbuilder-time-stamp: 1742371399
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [pymatgen_2025.2.18+dfsg1-4.dsc]
I: copying [./pymatgen_2025.2.18+dfsg1.orig.tar.xz]
I: copying [./pymatgen_2025.2.18+dfsg1-4.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./pymatgen_2025.2.18+dfsg1-4.dsc: unsupported subcommand
dpkg-source: info: extracting pymatgen in pymatgen-2025.2.18+dfsg1
dpkg-source: info: unpacking pymatgen_2025.2.18+dfsg1.orig.tar.xz
dpkg-source: info: unpacking pymatgen_2025.2.18+dfsg1-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying test_lammps_regex_path.patch
dpkg-source: info: applying skip_nonfree_testfile.patch
dpkg-source: info: applying CVE-2022-42964_ReDOS_vulnerability.patch
dpkg-source: info: applying skip_test_zsl_numba.patch
dpkg-source: info: applying no_sphinx_markdown_builder.patch
dpkg-source: info: applying tests_init.patch
dpkg-source: info: applying tests_pass_or_skip.patch
dpkg-source: info: applying docs_index.patch
dpkg-source: info: applying docs_libjs_local.patch
dpkg-source: info: applying test_files_writing.patch
dpkg-source: info: applying test_tolerance.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/6824/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='armhf'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='armhf'
IFS='
'
INVOCATION_ID='9cc58990923d4cf4813b1f937426cce7'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='6824'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Mj1p14Vm/pbuilderrc_IjNU --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Mj1p14Vm/b1 --logfile b1/build.log pymatgen_2025.2.18+dfsg1-4.dsc'
SUDO_GID='114'
SUDO_UID='108'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://10.0.0.15:3142/'
I: uname -a
Linux virt64a 6.1.0-32-arm64 #1 SMP Debian 6.1.129-1 (2025-03-06) aarch64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/6824/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), pymatgen-test-files (>= 2025.2.18~), dh-python, dh-sequence-python3, cython3, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-pytest, python3-frozendict, python3-matplotlib (>= 3.8~), python3-monty (>= 2025.1.9~), python3-networkx (>= 3~), python3-numpy (>= 1.25.0~), python3-palettable (>= 3.3.3~), python3-pandas (>= 2~), python3-plotly (>= 5.0.0~), python3-pybtex (>= 0.24.0~), python3-requests (>= 2.32~), python3-ruamel.yaml (>= 0.17.0~), python3-scipy (>= 1.13.0~), python3-spglib (>= 2.5.0~), python3-sympy (>= 1.6.2~), python3-tabulate (>= 0.9~), python3-tqdm (>= 4.60~), python3-uncertainties (>= 3.1.4~), python3-joblib (>= 1~), python3-ase (>= 3.23.0~), python3-bs4 (>= 4.9.1~), python3-vtk9 | python3-paraview, python3-h5py (>= 3.11.0~), python3-netcdf4 (>= 1.6.5~), python3-phonopy (>= 2.33.3~), python3-openbabel (>= 3.1.1~), packmol, dh-sequence-sphinxdoc, libjs-jquery, libjs-mathjax, python3-sphinx-rtd-theme
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19509 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on pymatgen-test-files (>= 2025.2.18~); however:
Package pymatgen-test-files is not installed.
pbuilder-satisfydepends-dummy depends on dh-python; however:
Package dh-python is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on cython3; however:
Package cython3 is not installed.
pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however:
Package pybuild-plugin-pyproject is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
Package python3-all-dev is not installed.
pbuilder-satisfydepends-dummy depends on python3-pytest; however:
Package python3-pytest is not installed.
pbuilder-satisfydepends-dummy depends on python3-frozendict; however:
Package python3-frozendict is not installed.
pbuilder-satisfydepends-dummy depends on python3-matplotlib (>= 3.8~); however:
Package python3-matplotlib is not installed.
pbuilder-satisfydepends-dummy depends on python3-monty (>= 2025.1.9~); however:
Package python3-monty is not installed.
pbuilder-satisfydepends-dummy depends on python3-networkx (>= 3~); however:
Package python3-networkx is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1.25.0~); however:
Package python3-numpy is not installed.
pbuilder-satisfydepends-dummy depends on python3-palettable (>= 3.3.3~); however:
Package python3-palettable is not installed.
pbuilder-satisfydepends-dummy depends on python3-pandas (>= 2~); however:
Package python3-pandas is not installed.
pbuilder-satisfydepends-dummy depends on python3-plotly (>= 5.0.0~); however:
Package python3-plotly is not installed.
pbuilder-satisfydepends-dummy depends on python3-pybtex (>= 0.24.0~); however:
Package python3-pybtex is not installed.
pbuilder-satisfydepends-dummy depends on python3-requests (>= 2.32~); however:
Package python3-requests is not installed.
pbuilder-satisfydepends-dummy depends on python3-ruamel.yaml (>= 0.17.0~); however:
Package python3-ruamel.yaml is not installed.
pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.13.0~); however:
Package python3-scipy is not installed.
pbuilder-satisfydepends-dummy depends on python3-spglib (>= 2.5.0~); however:
Package python3-spglib is not installed.
pbuilder-satisfydepends-dummy depends on python3-sympy (>= 1.6.2~); however:
Package python3-sympy is not installed.
pbuilder-satisfydepends-dummy depends on python3-tabulate (>= 0.9~); however:
Package python3-tabulate is not installed.
pbuilder-satisfydepends-dummy depends on python3-tqdm (>= 4.60~); however:
Package python3-tqdm is not installed.
pbuilder-satisfydepends-dummy depends on python3-uncertainties (>= 3.1.4~); however:
Package python3-uncertainties is not installed.
pbuilder-satisfydepends-dummy depends on python3-joblib (>= 1~); however:
Package python3-joblib is not installed.
pbuilder-satisfydepends-dummy depends on python3-ase (>= 3.23.0~); however:
Package python3-ase is not installed.
pbuilder-satisfydepends-dummy depends on python3-bs4 (>= 4.9.1~); however:
Package python3-bs4 is not installed.
pbuilder-satisfydepends-dummy depends on python3-vtk9 | python3-paraview; however:
Package python3-vtk9 is not installed.
Package python3-paraview is not installed.
pbuilder-satisfydepends-dummy depends on python3-h5py (>= 3.11.0~); however:
Package python3-h5py is not installed.
pbuilder-satisfydepends-dummy depends on python3-netcdf4 (>= 1.6.5~); however:
Package python3-netcdf4 is not installed.
pbuilder-satisfydepends-dummy depends on python3-phonopy (>= 2.33.3~); however:
Package python3-phonopy is not installed.
pbuilder-satisfydepends-dummy depends on python3-openbabel (>= 3.1.1~); however:
Package python3-openbabel is not installed.
pbuilder-satisfydepends-dummy depends on packmol; however:
Package packmol is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-sphinxdoc; however:
Package dh-sequence-sphinxdoc is not installed.
pbuilder-satisfydepends-dummy depends on libjs-jquery; however:
Package libjs-jquery is not installed.
pbuilder-satisfydepends-dummy depends on libjs-mathjax; however:
Package libjs-mathjax is not installed.
pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however:
Package python3-sphinx-rtd-theme is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} groff-base{a} hwloc-nox{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libelf1t64{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgcrypt20{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libgl2ps1.4{a} libgles2{a} libglew2.2{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-hl-310{a} libhwloc15{a} libice6{a} libicu76{a} libidn2-0{a} libimagequant0{a} libinchi1.07{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblcms2-2{a} libldap2{a} liblerc4{a} libllvm19{a} liblzf1{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmpich12{a} libmtdev1t64{a} libnetcdf22{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libogg0{a} libopenbabel7{a} libopengl0{a} libopenjp2-7{a} libp11-kit0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libproc2-0{a} libproj25{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5gui5t64{a} libqt5network5t64{a} libqt5widgets5t64{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libslurm42t64{a} libsm6{a} libssh2-1t64{a} libsymspg2{a} libsz2{a} libtasn1-6{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtcl8.6{a} libtheoradec1{a} libtheoraenc1{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libvtk9.3{a} libvtk9.3-qt{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxxf86vm1{a} libyaml-0-2{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} mpi-default-bin{a} mpich{a} netbase{a} openssl{a} packmol{a} po-debconf{a} procps{a} proj-data{a} pybuild-plugin-pyproject{a} pymatgen-test-files{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-annotated-types{a} python3-ase{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-bs4{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-cftime{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-dnspython{a} python3-docutils{a} python3-email-validator{a} python3-fastjsonschema{a} python3-fonttools{a} python3-frozendict{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-nbformat{a} python3-netcdf4{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-openbabel{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-phonopy{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytz{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-spglib{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-vtk9{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-common{a} sphinx-rtd-theme-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xkb-data{a} xml-core{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
curl dbus isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpg-error-l10n libhwloc-plugins libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libmpich-dev libpaper-utils libqt5svg5 libsasl2-modules linux-sysctl-defaults lynx mesa-vulkan-drivers psmisc publicsuffix python-monty-doc python3-bottleneck python3-bson-ext python3-cryptography python3-cssselect python3-fqdn python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-isoduration python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openpyxl python3-pooch python3-psutil python3-pydot python3-pygraphviz python3-pymatgen python3-rfc3339-validator python3-rfc3986-validator python3-rfc3987 python3-tables python3-uritemplate python3-webcolors qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 tcl wget xdg-user-dirs
0 packages upgraded, 356 newly installed, 0 to remove and 0 not upgraded.
Need to get 479 MB of archives. After unpacking 1750 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main armhf fonts-lato all 2.015-1 [2780 kB]
Get: 2 http://deb.debian.org/debian unstable/main armhf libpython3.13-minimal armhf 3.13.2-2 [846 kB]
Get: 3 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.7.0-1 [85.2 kB]
Get: 4 http://deb.debian.org/debian unstable/main armhf python3.13-minimal armhf 3.13.2-2 [1840 kB]
Get: 5 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.13.2-2 [27.1 kB]
Get: 6 http://deb.debian.org/debian unstable/main armhf media-types all 13.0.0 [29.3 kB]
Get: 7 http://deb.debian.org/debian unstable/main armhf netbase all 6.5 [12.4 kB]
Get: 8 http://deb.debian.org/debian unstable/main armhf tzdata all 2025a-2 [259 kB]
Get: 9 http://deb.debian.org/debian unstable/main armhf libffi8 armhf 3.4.7-1 [20.3 kB]
Get: 10 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-6 [69.4 kB]
Get: 11 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-6 [146 kB]
Get: 12 http://deb.debian.org/debian unstable/main armhf libpython3.13-stdlib armhf 3.13.2-2 [1826 kB]
Get: 13 http://deb.debian.org/debian unstable/main armhf python3.13 armhf 3.13.2-2 [746 kB]
Get: 14 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.13.2-2 [10.1 kB]
Get: 15 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.13.2-2 [28.1 kB]
Get: 16 http://deb.debian.org/debian unstable/main armhf python3-numpy-dev armhf 1:2.2.3+ds-5 [133 kB]
Get: 17 http://deb.debian.org/debian unstable/main armhf libblas3 armhf 3.12.1-2 [116 kB]
Get: 18 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14.2.0-19 [263 kB]
Get: 19 http://deb.debian.org/debian unstable/main armhf liblapack3 armhf 3.12.1-2 [1835 kB]
Get: 20 http://deb.debian.org/debian unstable/main armhf python3-numpy armhf 1:2.2.3+ds-5 [3478 kB]
Get: 21 http://deb.debian.org/debian unstable/main armhf sgml-base all 1.31 [15.4 kB]
Get: 22 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-7 [56.3 kB]
Get: 23 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-7 [866 kB]
Get: 24 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB]
Get: 25 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.4.1-1 [1393 kB]
Get: 26 http://deb.debian.org/debian unstable/main armhf ca-certificates all 20241223 [164 kB]
Get: 27 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.46-2 [337 kB]
Get: 28 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.46-2 [99.9 kB]
Get: 29 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.46-2 [42.6 kB]
Get: 30 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.1-1 [238 kB]
Get: 31 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB]
Get: 32 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-7 [1095 kB]
Get: 33 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.4-5 [84.9 kB]
Get: 34 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB]
Get: 35 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB]
Get: 36 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-7 [272 kB]
Get: 37 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB]
Get: 38 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get: 39 http://deb.debian.org/debian unstable/main armhf automake all 1:1.17-3 [862 kB]
Get: 40 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.1-1 [770 kB]
Get: 41 http://deb.debian.org/debian unstable/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [934 kB]
Get: 42 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b7 [284 kB]
Get: 43 http://deb.debian.org/debian unstable/main armhf libpng16-16t64 armhf 1.6.47-1.1 [264 kB]
Get: 44 http://deb.debian.org/debian unstable/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB]
Get: 45 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 46 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get: 47 http://deb.debian.org/debian unstable/main armhf fontconfig-config armhf 2.15.0-2.1 [318 kB]
Get: 48 http://deb.debian.org/debian unstable/main armhf libfontconfig1 armhf 2.15.0-2.1 [371 kB]
Get: 49 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB]
Get: 50 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB]
Get: 51 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB]
Get: 52 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.10-2 [337 kB]
Get: 53 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB]
Get: 54 http://deb.debian.org/debian unstable/main armhf libxrender1 armhf 1:0.9.10-1.1+b4 [25.0 kB]
Get: 55 http://deb.debian.org/debian unstable/main armhf libxft2 armhf 2.3.6-1+b4 [46.4 kB]
Get: 56 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b3 [45.2 kB]
Get: 57 http://deb.debian.org/debian unstable/main armhf x11-common all 1:7.7+24 [217 kB]
Get: 58 http://deb.debian.org/debian unstable/main armhf libxss1 armhf 1:1.2.3-1+b3 [16.4 kB]
Get: 59 http://deb.debian.org/debian unstable/main armhf libtk8.6 armhf 8.6.16-1 [698 kB]
Get: 60 http://deb.debian.org/debian unstable/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-8 [483 kB]
Get: 61 http://deb.debian.org/debian unstable/main armhf blt armhf 2.5.3+dfsg-8 [5984 B]
Get: 62 http://deb.debian.org/debian unstable/main armhf cython3 armhf 3.0.11+dfsg-2+b1 [2329 kB]
Get: 63 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 64 http://deb.debian.org/debian unstable/main armhf libtool all 2.5.4-4 [539 kB]
Get: 65 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 66 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 67 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 68 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 69 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB]
Get: 70 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB]
Get: 71 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-1 [444 kB]
Get: 72 http://deb.debian.org/debian unstable/main armhf libicu76 armhf 76.1-3 [9368 kB]
Get: 73 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.3+b1 [605 kB]
Get: 74 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.1-1 [1560 kB]
Get: 75 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 76 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 77 http://deb.debian.org/debian unstable/main armhf debhelper all 13.24.1 [920 kB]
Get: 78 http://deb.debian.org/debian unstable/main armhf dh-python all 6.20250308 [115 kB]
Get: 79 http://deb.debian.org/debian unstable/main armhf xml-core all 0.19 [20.1 kB]
Get: 80 http://deb.debian.org/debian unstable/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB]
Get: 81 http://deb.debian.org/debian unstable/main armhf fontconfig armhf 2.15.0-2.1 [462 kB]
Get: 82 http://deb.debian.org/debian unstable/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get: 83 http://deb.debian.org/debian unstable/main armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB]
Get: 84 http://deb.debian.org/debian unstable/main armhf fonts-lyx all 2.4.3-1 [190 kB]
Get: 85 http://deb.debian.org/debian unstable/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 86 http://deb.debian.org/debian unstable/main armhf libhwloc15 armhf 2.12.0-1 [135 kB]
Get: 87 http://deb.debian.org/debian unstable/main armhf hwloc-nox armhf 2.12.0-1 [204 kB]
Get: 88 http://deb.debian.org/debian unstable/main armhf libaec0 armhf 1.1.3-1+b1 [21.9 kB]
Get: 89 http://deb.debian.org/debian unstable/main armhf libpixman-1-0 armhf 0.44.0-3 [164 kB]
Get: 90 http://deb.debian.org/debian unstable/main armhf libxcb-render0 armhf 1.17.0-2+b1 [114 kB]
Get: 91 http://deb.debian.org/debian unstable/main armhf libxcb-shm0 armhf 1.17.0-2+b1 [105 kB]
Get: 92 http://deb.debian.org/debian unstable/main armhf libcairo2 armhf 1.18.4-1+b1 [443 kB]
Get: 93 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.2-1+b1 [23.6 kB]
Get: 94 http://deb.debian.org/debian unstable/main armhf libidn2-0 armhf 2.3.8-2 [105 kB]
Get: 95 http://deb.debian.org/debian unstable/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB]
Get: 96 http://deb.debian.org/debian unstable/main armhf libtasn1-6 armhf 4.20.0-2 [44.4 kB]
Get: 97 http://deb.debian.org/debian unstable/main armhf libgnutls30t64 armhf 3.8.9-2 [1382 kB]
Get: 98 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-5 [30.4 kB]
Get: 99 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-5 [76.0 kB]
Get: 100 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B]
Get: 101 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-5 [284 kB]
Get: 102 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-5 [116 kB]
Get: 103 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-9 [18.5 kB]
Get: 104 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-9 [50.4 kB]
Get: 105 http://deb.debian.org/debian unstable/main armhf libldap2 armhf 2.6.9+dfsg-2 [168 kB]
Get: 106 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB]
Get: 107 http://deb.debian.org/debian unstable/main armhf libnghttp3-9 armhf 1.8.0-1 [59.9 kB]
Get: 108 http://deb.debian.org/debian unstable/main armhf libngtcp2-16 armhf 1.11.0-1 [127 kB]
Get: 109 http://deb.debian.org/debian unstable/main armhf libngtcp2-crypto-gnutls8 armhf 1.11.0-1 [26.7 kB]
Get: 110 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB]
Get: 111 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB]
Get: 112 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB]
Get: 113 http://deb.debian.org/debian unstable/main armhf libcurl3t64-gnutls armhf 8.13.0~rc2-1 [323 kB]
Get: 114 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.13.0~rc2-1 [328 kB]
Get: 115 http://deb.debian.org/debian unstable/main armhf libdbus-1-3 armhf 1.16.2-2 [155 kB]
Get: 116 http://deb.debian.org/debian unstable/main armhf libdeflate0 armhf 1.23-1+b1 [36.7 kB]
Get: 117 http://deb.debian.org/debian unstable/main armhf libdouble-conversion3 armhf 3.3.1-1 [39.3 kB]
Get: 118 http://deb.debian.org/debian unstable/main armhf libdrm-common all 2.4.124-1 [8180 B]
Get: 119 http://deb.debian.org/debian unstable/main armhf libdrm2 armhf 2.4.124-1 [34.3 kB]
Get: 120 http://deb.debian.org/debian unstable/main armhf libdrm-amdgpu1 armhf 2.4.124-1 [20.6 kB]
Get: 121 http://deb.debian.org/debian unstable/main armhf libedit2 armhf 3.1-20250104-1 [78.0 kB]
Get: 122 http://deb.debian.org/debian unstable/main armhf libwayland-server0 armhf 1.23.1-3 [28.2 kB]
Get: 123 http://deb.debian.org/debian unstable/main armhf libz3-4 armhf 4.13.3-1 [7252 kB]
Get: 124 http://deb.debian.org/debian unstable/main armhf libllvm19 armhf 1:19.1.7-3 [23.8 MB]
Get: 125 http://deb.debian.org/debian unstable/main armhf libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 126 http://deb.debian.org/debian unstable/main armhf libsensors5 armhf 1:3.6.0-10+b1 [32.3 kB]
Get: 127 http://deb.debian.org/debian unstable/main armhf libx11-xcb1 armhf 2:1.8.10-2 [241 kB]
Get: 128 http://deb.debian.org/debian unstable/main armhf libxcb-dri3-0 armhf 1.17.0-2+b1 [107 kB]
Get: 129 http://deb.debian.org/debian unstable/main armhf libxcb-present0 armhf 1.17.0-2+b1 [105 kB]
Get: 130 http://deb.debian.org/debian unstable/main armhf libxcb-randr0 armhf 1.17.0-2+b1 [116 kB]
Get: 131 http://deb.debian.org/debian unstable/main armhf libxcb-sync1 armhf 1.17.0-2+b1 [108 kB]
Get: 132 http://deb.debian.org/debian unstable/main armhf libxcb-xfixes0 armhf 1.17.0-2+b1 [109 kB]
Get: 133 http://deb.debian.org/debian unstable/main armhf libxshmfence1 armhf 1.3-1+b3 [8748 B]
Get: 134 http://deb.debian.org/debian unstable/main armhf mesa-libgallium armhf 25.0.1-2 [7396 kB]
Get: 135 http://deb.debian.org/debian unstable/main armhf libgbm1 armhf 25.0.1-2 [40.2 kB]
Get: 136 http://deb.debian.org/debian unstable/main armhf libwayland-client0 armhf 1.23.1-3 [21.5 kB]
Get: 137 http://deb.debian.org/debian unstable/main armhf libegl-mesa0 armhf 25.0.1-2 [106 kB]
Get: 138 http://deb.debian.org/debian unstable/main armhf libevdev2 armhf 1.13.3+dfsg-1 [26.2 kB]
Get: 139 http://deb.debian.org/debian unstable/main armhf libexpat1-dev armhf 2.7.0-1 [142 kB]
Get: 140 http://deb.debian.org/debian unstable/main armhf libfribidi0 armhf 1.0.16-1 [24.6 kB]
Get: 141 http://deb.debian.org/debian unstable/main armhf libgpg-error0 armhf 1.51-3 [71.9 kB]
Get: 142 http://deb.debian.org/debian unstable/main armhf libgcrypt20 armhf 1.11.0-7 [727 kB]
Get: 143 http://deb.debian.org/debian unstable/main armhf libglvnd0 armhf 1.7.0-1+b2 [51.8 kB]
Get: 144 http://deb.debian.org/debian unstable/main armhf libxcb-glx0 armhf 1.17.0-2+b1 [120 kB]
Get: 145 http://deb.debian.org/debian unstable/main armhf libxxf86vm1 armhf 1:1.1.4-1+b4 [18.2 kB]
Get: 146 http://deb.debian.org/debian unstable/main armhf libvulkan1 armhf 1.4.309.0-1 [114 kB]
Get: 147 http://deb.debian.org/debian unstable/main armhf libgl1-mesa-dri armhf 25.0.1-2 [42.7 kB]
Get: 148 http://deb.debian.org/debian unstable/main armhf libglx-mesa0 armhf 25.0.1-2 [123 kB]
Get: 149 http://deb.debian.org/debian unstable/main armhf libglx0 armhf 1.7.0-1+b2 [32.6 kB]
Get: 150 http://deb.debian.org/debian unstable/main armhf libgl1 armhf 1.7.0-1+b2 [88.2 kB]
Get: 151 http://deb.debian.org/debian unstable/main armhf libgl2ps1.4 armhf 1.4.2+dfsg1-2 [36.5 kB]
Get: 152 http://deb.debian.org/debian unstable/main armhf libgles2 armhf 1.7.0-1+b2 [17.7 kB]
Get: 153 http://deb.debian.org/debian unstable/main armhf libglew2.2 armhf 2.2.0-4+b2 [166 kB]
Get: 154 http://deb.debian.org/debian unstable/main armhf libglib2.0-0t64 armhf 2.84.0-2 [1338 kB]
Get: 155 http://deb.debian.org/debian unstable/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB]
Get: 156 http://deb.debian.org/debian unstable/main armhf libgudev-1.0-0 armhf 238-6 [12.7 kB]
Get: 157 http://deb.debian.org/debian unstable/main armhf libharfbuzz0b armhf 10.2.0-1+b1 [419 kB]
Get: 158 http://deb.debian.org/debian unstable/main armhf libsz2 armhf 1.1.3-1+b1 [8036 B]
Get: 159 http://deb.debian.org/debian unstable/main armhf libhdf5-310 armhf 1.14.5+repack-3 [1272 kB]
Get: 160 http://deb.debian.org/debian unstable/main armhf libhdf5-hl-310 armhf 1.14.5+repack-3 [67.3 kB]
Get: 161 http://deb.debian.org/debian unstable/main armhf libice6 armhf 2:1.1.1-1 [58.5 kB]
Get: 162 http://deb.debian.org/debian unstable/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB]
Get: 163 http://deb.debian.org/debian unstable/main armhf libinchi1.07 armhf 1.07.3+dfsg-1 [449 kB]
Get: 164 http://deb.debian.org/debian unstable/main armhf libwacom-common all 2.14.0-1 [103 kB]
Get: 165 http://deb.debian.org/debian unstable/main armhf libwacom9 armhf 2.14.0-1 [21.9 kB]
Get: 166 http://deb.debian.org/debian unstable/main armhf libinput-bin armhf 1.27.1-1 [24.4 kB]
Get: 167 http://deb.debian.org/debian unstable/main armhf libmtdev1t64 armhf 1.1.7-1 [21.5 kB]
Get: 168 http://deb.debian.org/debian unstable/main armhf libinput10 armhf 1.27.1-1 [116 kB]
Get: 169 http://deb.debian.org/debian unstable/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB]
Get: 170 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3.1 [145 kB]
Get: 171 http://deb.debian.org/debian unstable/main armhf libjs-bootstrap all 3.4.1+dfsg-3 [172 kB]
Get: 172 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 173 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 174 http://deb.debian.org/debian unstable/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 175 http://deb.debian.org/debian unstable/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 176 http://deb.debian.org/debian unstable/main armhf libjs-sphinxdoc all 8.1.3-5 [30.5 kB]
Get: 177 http://deb.debian.org/debian unstable/main armhf libjson-perl all 4.10000-1 [87.5 kB]
Get: 178 http://deb.debian.org/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB]
Get: 179 http://deb.debian.org/debian unstable/main armhf liblcms2-2 armhf 2.16-2 [131 kB]
Get: 180 http://deb.debian.org/debian unstable/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB]
Get: 181 http://deb.debian.org/debian unstable/main armhf liblzf1 armhf 3.6-4+b3 [9380 B]
Get: 182 http://deb.debian.org/debian unstable/main armhf libmaeparser1 armhf 1.3.1-1+b2 [80.7 kB]
Get: 183 http://deb.debian.org/debian unstable/main armhf libmd4c0 armhf 0.5.2-2+b1 [43.8 kB]
Get: 184 http://deb.debian.org/debian unstable/main armhf libmpich12 armhf 4.3.0-2 [1496 kB]
Get: 185 http://deb.debian.org/debian unstable/main armhf libnetcdf22 armhf 1:4.9.3-1 [463 kB]
Get: 186 http://deb.debian.org/debian unstable/main armhf libogg0 armhf 1.3.5-3+b2 [21.9 kB]
Get: 187 http://deb.debian.org/debian unstable/main armhf libopenbabel7 armhf 3.1.1+dfsg-11+b2 [2964 kB]
Get: 188 http://deb.debian.org/debian unstable/main armhf libopenjp2-7 armhf 2.5.3-2 [184 kB]
Get: 189 http://deb.debian.org/debian unstable/main armhf libpcre2-16-0 armhf 10.45-1 [243 kB]
Get: 190 http://deb.debian.org/debian unstable/main armhf proj-data all 9.6.0-1 [6303 kB]
Get: 191 http://deb.debian.org/debian unstable/main armhf libsharpyuv0 armhf 1.5.0-0.1 [114 kB]
Get: 192 http://deb.debian.org/debian unstable/main armhf libwebp7 armhf 1.5.0-0.1 [273 kB]
Get: 193 http://deb.debian.org/debian unstable/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB]
Get: 194 http://deb.debian.org/debian unstable/main armhf libproj25 armhf 9.6.0-1 [1230 kB]
Get: 195 http://deb.debian.org/debian unstable/main armhf libpython3.13 armhf 3.13.2-2 [1873 kB]
Get: 196 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB]
Get: 197 http://deb.debian.org/debian unstable/main armhf libpython3.13-dev armhf 3.13.2-2 [3791 kB]
Get: 198 http://deb.debian.org/debian unstable/main armhf libpython3-dev armhf 3.13.2-2 [10.3 kB]
Get: 199 http://deb.debian.org/debian unstable/main armhf libpython3-all-dev armhf 3.13.2-2 [1068 B]
Get: 200 http://deb.debian.org/debian unstable/main armhf libqhull-r8.0 armhf 2020.2-6+b2 [220 kB]
Get: 201 http://deb.debian.org/debian unstable/main armhf shared-mime-info armhf 2.4-5+b2 [754 kB]
Get: 202 http://deb.debian.org/debian unstable/main armhf libqt5core5t64 armhf 5.15.15+dfsg-4+b1 [1599 kB]
Get: 203 http://deb.debian.org/debian unstable/main armhf libqt5dbus5t64 armhf 5.15.15+dfsg-4+b1 [192 kB]
Get: 204 http://deb.debian.org/debian unstable/main armhf libegl1 armhf 1.7.0-1+b2 [29.1 kB]
Get: 205 http://deb.debian.org/debian unstable/main armhf libqt5network5t64 armhf 5.15.15+dfsg-4+b1 [604 kB]
Get: 206 http://deb.debian.org/debian unstable/main armhf libsm6 armhf 2:1.2.4-1 [33.5 kB]
Get: 207 http://deb.debian.org/debian unstable/main armhf libxcb-icccm4 armhf 0.4.2-1 [26.4 kB]
Get: 208 http://deb.debian.org/debian unstable/main armhf libxcb-util1 armhf 0.4.1-1 [22.5 kB]
Get: 209 http://deb.debian.org/debian unstable/main armhf libxcb-image0 armhf 0.4.0-2+b2 [21.0 kB]
Get: 210 http://deb.debian.org/debian unstable/main armhf libxcb-keysyms1 armhf 0.4.1-1 [16.2 kB]
Get: 211 http://deb.debian.org/debian unstable/main armhf libxcb-render-util0 armhf 0.3.10-1 [17.7 kB]
Get: 212 http://deb.debian.org/debian unstable/main armhf libxcb-shape0 armhf 1.17.0-2+b1 [106 kB]
Get: 213 http://deb.debian.org/debian unstable/main armhf libxcb-xinerama0 armhf 1.17.0-2+b1 [105 kB]
Get: 214 http://deb.debian.org/debian unstable/main armhf libxcb-xinput0 armhf 1.17.0-2+b1 [127 kB]
Get: 215 http://deb.debian.org/debian unstable/main armhf libxcb-xkb1 armhf 1.17.0-2+b1 [126 kB]
Get: 216 http://deb.debian.org/debian unstable/main armhf xkb-data all 2.42-1 [790 kB]
Get: 217 http://deb.debian.org/debian unstable/main armhf libxkbcommon0 armhf 1.7.0-2 [99.7 kB]
Get: 218 http://deb.debian.org/debian unstable/main armhf libxkbcommon-x11-0 armhf 1.7.0-2 [14.3 kB]
Get: 219 http://deb.debian.org/debian unstable/main armhf libqt5gui5t64 armhf 5.15.15+dfsg-4+b1 [2688 kB]
Get: 220 http://deb.debian.org/debian unstable/main armhf libqt5widgets5t64 armhf 5.15.15+dfsg-4+b1 [2120 kB]
Get: 221 http://deb.debian.org/debian unstable/main armhf libraqm0 armhf 0.10.2-1 [11.6 kB]
Get: 222 http://deb.debian.org/debian unstable/main armhf libslurm42t64 armhf 24.11.3-2 [696 kB]
Get: 223 http://deb.debian.org/debian unstable/main armhf libsymspg2 armhf 2.6.0-1 [182 kB]
Get: 224 http://deb.debian.org/debian unstable/main armhf libtbbbind-2-5 armhf 2022.0.0-2 [13.3 kB]
Get: 225 http://deb.debian.org/debian unstable/main armhf libtbbmalloc2 armhf 2022.0.0-2 [43.1 kB]
Get: 226 http://deb.debian.org/debian unstable/main armhf libtbb12 armhf 2022.0.0-2 [77.4 kB]
Get: 227 http://deb.debian.org/debian unstable/main armhf libtheoradec1 armhf 1.2.0~alpha1+dfsg-6 [46.2 kB]
Get: 228 http://deb.debian.org/debian unstable/main armhf libtheoraenc1 armhf 1.2.0~alpha1+dfsg-6 [88.2 kB]
Get: 229 http://deb.debian.org/debian unstable/main armhf libopengl0 armhf 1.7.0-1+b2 [32.1 kB]
Get: 230 http://deb.debian.org/debian unstable/main armhf libvtk9.3 armhf 9.3.0+dfsg1-4 [19.5 MB]
Get: 231 http://deb.debian.org/debian unstable/main armhf libvtk9.3-qt armhf 9.3.0+dfsg1-4 [150 kB]
Get: 232 http://deb.debian.org/debian unstable/main armhf libwebpdemux2 armhf 1.5.0-0.1 [112 kB]
Get: 233 http://deb.debian.org/debian unstable/main armhf libwebpmux3 armhf 1.5.0-0.1 [123 kB]
Get: 234 http://deb.debian.org/debian unstable/main armhf libxslt1.1 armhf 1.1.35-1.2 [212 kB]
Get: 235 http://deb.debian.org/debian unstable/main armhf libyaml-0-2 armhf 0.2.5-2 [45.4 kB]
Get: 236 http://deb.debian.org/debian unstable/main armhf mpich armhf 4.3.0-2 [222 kB]
Get: 237 http://deb.debian.org/debian unstable/main armhf mpi-default-bin armhf 1.18 [2576 B]
Get: 238 http://deb.debian.org/debian unstable/main armhf packmol armhf 1:20.16.0-1 [112 kB]
Get: 239 http://deb.debian.org/debian unstable/main armhf python3-packaging all 24.2-1 [55.3 kB]
Get: 240 http://deb.debian.org/debian unstable/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB]
Get: 241 http://deb.debian.org/debian unstable/main armhf python3-toml all 0.10.2-1 [16.2 kB]
Get: 242 http://deb.debian.org/debian unstable/main armhf python3-wheel all 0.45.1-1 [56.7 kB]
Get: 243 http://deb.debian.org/debian unstable/main armhf python3-build all 1.2.2-1 [36.0 kB]
Get: 244 http://deb.debian.org/debian unstable/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB]
Get: 245 http://deb.debian.org/debian unstable/main armhf pybuild-plugin-pyproject all 6.20250308 [11.7 kB]
Get: 246 http://deb.debian.org/debian unstable/main armhf pymatgen-test-files all 2025.2.18-1 [211 MB]
Get: 247 http://deb.debian.org/debian unstable/main armhf python-babel-localedata all 2.17.0-1 [6050 kB]
Get: 248 http://deb.debian.org/debian unstable/main armhf python-matplotlib-data all 3.8.3-7 [2735 kB]
Get: 249 http://deb.debian.org/debian unstable/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB]
Get: 250 http://deb.debian.org/debian unstable/main armhf python3-all armhf 3.13.2-2 [1044 B]
Get: 251 http://deb.debian.org/debian unstable/main armhf python3.13-dev armhf 3.13.2-2 [507 kB]
Get: 252 http://deb.debian.org/debian unstable/main armhf python3-dev armhf 3.13.2-2 [26.1 kB]
Get: 253 http://deb.debian.org/debian unstable/main armhf python3-all-dev armhf 3.13.2-2 [1064 B]
Get: 254 http://deb.debian.org/debian unstable/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 255 http://deb.debian.org/debian unstable/main armhf python3-annotated-types all 0.7.0-1 [18.8 kB]
Get: 256 http://deb.debian.org/debian unstable/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get: 257 http://deb.debian.org/debian unstable/main armhf python3-scipy armhf 1.15.2-6 [14.9 MB]
Get: 258 http://deb.debian.org/debian unstable/main armhf python3-spglib armhf 2.6.0-1 [52.0 kB]
Get: 259 http://deb.debian.org/debian unstable/main armhf python3-dateutil all 2.9.0-4 [79.4 kB]
Get: 260 http://deb.debian.org/debian unstable/main armhf python3-pil armhf 11.1.0-5+b1 [481 kB]
Get: 261 http://deb.debian.org/debian unstable/main armhf python3.13-tk armhf 3.13.2-2 [103 kB]
Get: 262 http://deb.debian.org/debian unstable/main armhf python3-tk armhf 3.13.2-1 [9516 B]
Get: 263 http://deb.debian.org/debian unstable/main armhf python3-pil.imagetk armhf 11.1.0-5+b1 [81.2 kB]
Get: 264 http://deb.debian.org/debian unstable/main armhf python3-pyparsing all 3.1.2-1 [146 kB]
Get: 265 http://deb.debian.org/debian unstable/main armhf python3-contourpy armhf 1.3.1-1+b1 [181 kB]
Get: 266 http://deb.debian.org/debian unstable/main armhf python3-cycler all 0.12.1-1 [9496 B]
Get: 267 http://deb.debian.org/debian unstable/main armhf python3-brotli armhf 1.1.0-2+b7 [293 kB]
Get: 268 http://deb.debian.org/debian unstable/main armhf python3-platformdirs all 4.3.6-1 [16.6 kB]
Get: 269 http://deb.debian.org/debian unstable/main armhf python3-fs all 2.4.16-7 [95.2 kB]
Get: 270 http://deb.debian.org/debian unstable/main armhf python3-lxml armhf 5.3.1-1+b1 [1192 kB]
Get: 271 http://deb.debian.org/debian unstable/main armhf python3-lz4 armhf 4.4.0+dfsg-1+b1 [24.1 kB]
Get: 272 http://deb.debian.org/debian unstable/main armhf python3-mpmath all 1.3.0-1 [419 kB]
Get: 273 http://deb.debian.org/debian unstable/main armhf python3-sympy all 1.13.3-5 [4148 kB]
Get: 274 http://deb.debian.org/debian unstable/main armhf python3-attr all 25.1.0-1 [68.7 kB]
Get: 275 http://deb.debian.org/debian unstable/main armhf python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB]
Get: 276 http://deb.debian.org/debian unstable/main armhf unicode-data all 15.1.0-1 [8547 kB]
Get: 277 http://deb.debian.org/debian unstable/main armhf python3-fonttools armhf 4.55.3-2+b1 [1393 kB]
Get: 278 http://deb.debian.org/debian unstable/main armhf python3-kiwisolver armhf 1.4.7-3+b1 [54.7 kB]
Get: 279 http://deb.debian.org/debian unstable/main armhf python3-matplotlib armhf 3.8.3-7+b1 [22.9 MB]
Get: 280 http://deb.debian.org/debian unstable/main armhf python3-ase all 3.24.0-1 [1730 kB]
Get: 281 http://deb.debian.org/debian unstable/main armhf python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 282 http://deb.debian.org/debian unstable/main armhf python3-babel all 2.17.0-1 [117 kB]
Get: 283 http://deb.debian.org/debian unstable/main armhf python3-soupsieve all 2.6-1 [38.3 kB]
Get: 284 http://deb.debian.org/debian unstable/main armhf python3-bs4 all 4.13.3-2 [166 kB]
Get: 285 http://deb.debian.org/debian unstable/main armhf python3-bson all 4.10.1-5 [87.1 kB]
Get: 286 http://deb.debian.org/debian unstable/main armhf python3-certifi all 2025.1.31+ds-1 [9652 B]
Get: 287 http://deb.debian.org/debian unstable/main armhf python3-cftime armhf 1.6.4-2 [192 kB]
Get: 288 http://deb.debian.org/debian unstable/main armhf python3-chardet all 5.2.0+dfsg-2 [108 kB]
Get: 289 http://deb.debian.org/debian unstable/main armhf python3-charset-normalizer armhf 3.4.1-1+b1 [118 kB]
Get: 290 http://deb.debian.org/debian unstable/main armhf python3-defusedxml all 0.7.1-3 [43.4 kB]
Get: 291 http://deb.debian.org/debian unstable/main armhf python3-dnspython all 2.7.0-1 [164 kB]
Get: 292 http://deb.debian.org/debian unstable/main armhf python3-roman all 5.0-1 [10.6 kB]
Get: 293 http://deb.debian.org/debian unstable/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB]
Get: 294 http://deb.debian.org/debian unstable/main armhf python3-idna all 3.10-1 [42.0 kB]
Get: 295 http://deb.debian.org/debian unstable/main armhf python3-email-validator all 2.2.0-1 [31.6 kB]
Get: 296 http://deb.debian.org/debian unstable/main armhf python3-fastjsonschema all 2.21.1-1 [22.4 kB]
Get: 297 http://deb.debian.org/debian unstable/main armhf python3-frozendict all 2.4.6-1 [13.0 kB]
Get: 298 http://deb.debian.org/debian unstable/main armhf python3-h5py-serial armhf 3.13.0-1+b1 [968 kB]
Get: 299 http://deb.debian.org/debian unstable/main armhf python3-h5py all 3.13.0-1 [15.0 kB]
Get: 300 http://deb.debian.org/debian unstable/main armhf python3-imagesize all 1.4.1-1 [6688 B]
Get: 301 http://deb.debian.org/debian unstable/main armhf python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 302 http://deb.debian.org/debian unstable/main armhf python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 303 http://deb.debian.org/debian unstable/main armhf python3-inflect all 7.3.1-2 [32.4 kB]
Get: 304 http://deb.debian.org/debian unstable/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get: 305 http://deb.debian.org/debian unstable/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 306 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 307 http://deb.debian.org/debian unstable/main armhf python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 308 http://deb.debian.org/debian unstable/main armhf python3-zipp all 3.21.0-1 [10.6 kB]
Get: 309 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 75.8.0-1 [724 kB]
Get: 310 http://deb.debian.org/debian unstable/main armhf python3-jaraco.context all 6.0.1-1 [8276 B]
Get: 311 http://deb.debian.org/debian unstable/main armhf python3-markupsafe armhf 2.1.5-1+b3 [13.6 kB]
Get: 312 http://deb.debian.org/debian unstable/main armhf python3-jinja2 all 3.1.5-2 [107 kB]
Get: 313 http://deb.debian.org/debian unstable/main armhf python3-joblib all 1.4.2-3 [216 kB]
Get: 314 http://deb.debian.org/debian unstable/main armhf python3-rpds-py armhf 0.21.0-2+b1 [231 kB]
Get: 315 http://deb.debian.org/debian unstable/main armhf python3-referencing all 0.35.1-2 [23.5 kB]
Get: 316 http://deb.debian.org/debian unstable/main armhf python3-jsonschema-specifications all 2023.12.1-2 [9020 B]
Get: 317 http://deb.debian.org/debian unstable/main armhf python3-jsonschema all 4.19.2-6 [71.4 kB]
Get: 318 http://deb.debian.org/debian unstable/main armhf python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB]
Get: 319 http://deb.debian.org/debian unstable/main armhf python3-jupyter-core all 5.7.2-5 [35.3 kB]
Get: 320 http://deb.debian.org/debian unstable/main armhf python3-latexcodec all 3.0.0-1 [17.5 kB]
Get: 321 http://deb.debian.org/debian unstable/main armhf python3-pytz all 2025.1-3 [150 kB]
Get: 322 http://deb.debian.org/debian unstable/main armhf python3-tz all 2025.1-3 [4004 B]
Get: 323 http://deb.debian.org/debian unstable/main armhf python3-pandas-lib armhf 2.2.3+dfsg-8+b1 [4141 kB]
Get: 324 http://deb.debian.org/debian unstable/main armhf python3-pandas all 2.2.3+dfsg-8 [3097 kB]
Get: 325 http://deb.debian.org/debian unstable/main armhf python3-pydantic-core armhf 2.27.2-1+b2 [1313 kB]
Get: 326 http://deb.debian.org/debian unstable/main armhf python3-pydantic armhf 2.10.6-1 [346 kB]
Get: 327 http://deb.debian.org/debian unstable/main armhf python3-tqdm all 4.67.1-2 [91.1 kB]
Get: 328 http://deb.debian.org/debian unstable/main armhf python3-ruamel.yaml.clib armhf 0.2.12+ds-1+b1 [118 kB]
Get: 329 http://deb.debian.org/debian unstable/main armhf python3-ruamel.yaml all 0.18.10+ds-1 [147 kB]
Get: 330 http://deb.debian.org/debian unstable/main armhf python3-monty all 2025.3.3-1 [46.1 kB]
Get: 331 http://deb.debian.org/debian unstable/main armhf python3-mpi4py armhf 4.0.3-3 [661 kB]
Get: 332 http://deb.debian.org/debian unstable/main armhf python3-nbformat all 5.9.1-1 [45.1 kB]
Get: 333 http://deb.debian.org/debian unstable/main armhf python3-netcdf4 armhf 1.7.2-1+b4 [567 kB]
Get: 334 http://deb.debian.org/debian unstable/main armhf python3-networkx all 3.2.1-5 [13.0 MB]
Get: 335 http://deb.debian.org/debian unstable/main armhf python3-openbabel armhf 3.1.1+dfsg-11+b2 [520 kB]
Get: 336 http://deb.debian.org/debian unstable/main armhf python3-palettable all 3.3.3-1 [69.7 kB]
Get: 337 http://deb.debian.org/debian unstable/main armhf python3-yaml armhf 6.0.2-1+b2 [126 kB]
Get: 338 http://deb.debian.org/debian unstable/main armhf python3-phonopy armhf 2.35.0-1 [321 kB]
Get: 339 http://deb.debian.org/debian unstable/main armhf python3-urllib3 all 2.3.0-2 [114 kB]
Get: 340 http://deb.debian.org/debian unstable/main armhf python3-requests all 2.32.3+dfsg-4 [72.1 kB]
Get: 341 http://deb.debian.org/debian unstable/main armhf python3-tenacity all 8.4.2+really8.4.1-2 [46.0 kB]
Get: 342 http://deb.debian.org/debian unstable/main armhf python3-plotly all 5.20.0+dfsg-1 [2726 kB]
Get: 343 http://deb.debian.org/debian unstable/main armhf python3-pluggy all 1.5.0-1 [26.9 kB]
Get: 344 http://deb.debian.org/debian unstable/main armhf python3-six all 1.17.0-1 [16.5 kB]
Get: 345 http://deb.debian.org/debian unstable/main armhf python3-pybtex all 0.24.0-4 [74.6 kB]
Get: 346 http://deb.debian.org/debian unstable/main armhf python3-pygments all 2.18.0+dfsg-2 [836 kB]
Get: 347 http://deb.debian.org/debian unstable/main armhf python3-pytest all 8.3.5-1 [250 kB]
Get: 348 http://deb.debian.org/debian unstable/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get: 349 http://deb.debian.org/debian unstable/main armhf sphinx-common all 8.1.3-5 [617 kB]
Get: 350 http://deb.debian.org/debian unstable/main armhf python3-sphinx all 8.1.3-5 [468 kB]
Get: 351 http://deb.debian.org/debian unstable/main armhf sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB]
Get: 352 http://deb.debian.org/debian unstable/main armhf python3-sphinxcontrib.jquery all 4.1-5 [7348 B]
Get: 353 http://deb.debian.org/debian unstable/main armhf python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [29.7 kB]
Get: 354 http://deb.debian.org/debian unstable/main armhf python3-tabulate all 0.9.0-1 [45.9 kB]
Get: 355 http://deb.debian.org/debian unstable/main armhf python3-uncertainties all 3.2.2-1 [54.7 kB]
Get: 356 http://deb.debian.org/debian unstable/main armhf python3-vtk9 armhf 9.3.0+dfsg1-4 [6269 kB]
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invoke-rc.d: could not determine current runlevel
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Current default time zone: 'Etc/UTC'
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152 added, 0 removed; done.
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Regenerating fonts cache... done.
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update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode
update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode
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Not building database; man-db/auto-update is not 'true'.
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I: Building the package
I: Running cd /build/reproducible-path/pymatgen-2025.2.18+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pymatgen_2025.2.18+dfsg1-4_source.changes
dpkg-buildpackage: info: source package pymatgen
dpkg-buildpackage: info: source version 2025.2.18+dfsg1-4
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Drew Parsons <dparsons@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from pymatgen-2025.2.18+dfsg1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
debian/rules execute_after_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/pymatgen-2025.2.18+dfsg1'
rm -f pymatgen/optimization/linear_assignment.c pymatgen/optimization/neighbors.c pymatgen/util/coord_cython.c
rm -rf pd.json .hypothesis tmp_dir
make[1]: Leaving directory '/build/reproducible-path/pymatgen-2025.2.18+dfsg1'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module
I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen
* Building wheel...
running bdist_wheel
running build
running build_py
creating build/lib.linux-armv7l-cpython-313/pymatgen
copying src/pymatgen/dao.py -> build/lib.linux-armv7l-cpython-313/pymatgen
creating build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/vampire_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/bader_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/critic2_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/gulp_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/mcsqs_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/enumlib_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
copying src/pymatgen/command_line/chargemol_caller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/command_line
creating build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/trajectory.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/molecular_orbitals.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/surface.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/xcfunc.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/operations.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/periodic_table.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/composition.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/tensors.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/structure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/interface.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/sites.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/spectrum.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/libxcfunc.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/bonds.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/ion.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/units.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/lattice.py -> build/lib.linux-armv7l-cpython-313/pymatgen/core
creating build/lib.linux-armv7l-cpython-313/pymatgen/apps
copying src/pymatgen/apps/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps
creating build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/boltztrap2.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/bandstructure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/core.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/plotter.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/cohp.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/dos.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
copying src/pymatgen/electronic_structure/boltztrap.py -> build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure
creating build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/computed_entries.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/entry_tools.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/compatibility.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/correction_calculator.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/mixing_scheme.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/exp_entries.py -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/molecule_matcher.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/eos.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/interface_reactions.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/thermochemistry.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/quasirrho.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/molecule_structure_comparator.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/bond_dissociation.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/wulff.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/excitation.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/pourbaix_diagram.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/surface_analysis.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/dimensionality.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/nmr.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/piezo_sensitivity.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/piezo.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/adsorption.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/cost.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/functional_groups.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/ewald.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/structure_matcher.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/quasiharmonic.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/transition_state.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/graphs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/reaction_calculator.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/phase_diagram.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/prototypes.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/hhi.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/xps.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/disorder.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/local_env.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/structure_analyzer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/chempot_diagram.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/energy_models.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/fragmenter.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/bond_valence.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
creating build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/analyzer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/bandstructure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/maggroups.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/groups.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/kpath.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/structure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/settings.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/site_symmetries.py -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
creating build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/graph_hashing.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/due.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/misc.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/num.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/string.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/typing.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/plotting.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/provenance.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/io_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/testing.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/coord.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/numba.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/joblib.py -> build/lib.linux-armv7l-cpython-313/pymatgen/util
creating build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/adf.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/lmto.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/packmol.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/babel.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/gaussian.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/shengbte.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/pwscf.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/core.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/atat.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/xr.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/prismatic.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/res.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/wannier90.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/multiwfn.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/cif.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/phonopy.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/optimade.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/zeopp.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/xcrysden.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/icet.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/cssr.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/openff.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/common.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/xyz.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/jarvis.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/template.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/fiesta.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/nwchem.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
copying src/pymatgen/io/ase.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io
creating build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/get_environment.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg_config.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/feff_plot_dos.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/feff_plot_cross_section.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg_analyze.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg_potcar.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg_plot.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
copying src/pymatgen/cli/pmg_structure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/cli
creating build/lib.linux-armv7l-cpython-313/pymatgen/vis
copying src/pymatgen/vis/plotters.py -> build/lib.linux-armv7l-cpython-313/pymatgen/vis
copying src/pymatgen/vis/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/vis
copying src/pymatgen/vis/structure_vtk.py -> build/lib.linux-armv7l-cpython-313/pymatgen/vis
copying src/pymatgen/vis/structure_chemview.py -> build/lib.linux-armv7l-cpython-313/pymatgen/vis
creating build/lib.linux-armv7l-cpython-313/pymatgen/ext
copying src/pymatgen/ext/matproj_legacy.py -> build/lib.linux-armv7l-cpython-313/pymatgen/ext
copying src/pymatgen/ext/optimade.py -> build/lib.linux-armv7l-cpython-313/pymatgen/ext
copying src/pymatgen/ext/cod.py -> build/lib.linux-armv7l-cpython-313/pymatgen/ext
copying src/pymatgen/ext/matproj.py -> build/lib.linux-armv7l-cpython-313/pymatgen/ext
creating build/lib.linux-armv7l-cpython-313/pymatgen/transformations
copying src/pymatgen/transformations/site_transformations.py -> build/lib.linux-armv7l-cpython-313/pymatgen/transformations
copying src/pymatgen/transformations/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/transformations
copying src/pymatgen/transformations/standard_transformations.py -> build/lib.linux-armv7l-cpython-313/pymatgen/transformations
copying src/pymatgen/transformations/transformation_abc.py -> build/lib.linux-armv7l-cpython-313/pymatgen/transformations
copying src/pymatgen/transformations/advanced_transformations.py -> build/lib.linux-armv7l-cpython-313/pymatgen/transformations
creating build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/bandstructure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/ir_spectra.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/gruneisen.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/plotter.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/thermal_displacements.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
copying src/pymatgen/phonon/dos.py -> build/lib.linux-armv7l-cpython-313/pymatgen/phonon
creating build/lib.linux-armv7l-cpython-313/pymatgen/optimization
copying src/pymatgen/optimization/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/optimization
creating build/lib.linux-armv7l-cpython-313/pymatgen/alchemy
copying src/pymatgen/alchemy/filters.py -> build/lib.linux-armv7l-cpython-313/pymatgen/alchemy
copying src/pymatgen/alchemy/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/alchemy
copying src/pymatgen/alchemy/materials.py -> build/lib.linux-armv7l-cpython-313/pymatgen/alchemy
copying src/pymatgen/alchemy/transmuters.py -> build/lib.linux-armv7l-cpython-313/pymatgen/alchemy
creating build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/analyzer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/conversion_battery.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/insertion_battery.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/plotter.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
copying src/pymatgen/apps/battery/battery_abc.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery
creating build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg
copying src/pymatgen/apps/borg/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg
copying src/pymatgen/apps/borg/queen.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg
copying src/pymatgen/apps/borg/hive.py -> build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity
copying src/pymatgen/analysis/elasticity/strain.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity
copying src/pymatgen/analysis/elasticity/elastic.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity
copying src/pymatgen/analysis/elasticity/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity
copying src/pymatgen/analysis/elasticity/stress.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/topological
copying src/pymatgen/analysis/topological/spillage.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/topological
copying src/pymatgen/analysis/topological/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/topological
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/gb
copying src/pymatgen/analysis/gb/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/gb
copying src/pymatgen/analysis/gb/grain.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/gb
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces
copying src/pymatgen/analysis/interfaces/coherent_interfaces.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces
copying src/pymatgen/analysis/interfaces/zsl.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces
copying src/pymatgen/analysis/interfaces/substrate_analyzer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces
copying src/pymatgen/analysis/interfaces/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar
copying src/pymatgen/analysis/solar/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar
copying src/pymatgen/analysis/solar/slme.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xas
copying src/pymatgen/analysis/xas/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xas
copying src/pymatgen/analysis/xas/spectrum.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xas
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv
copying src/pymatgen/analysis/chemenv/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
copying src/pymatgen/analysis/structure_prediction/substitutor.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
copying src/pymatgen/analysis/structure_prediction/substitution_probability.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
copying src/pymatgen/analysis/structure_prediction/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
copying src/pymatgen/analysis/structure_prediction/volume_predictor.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
copying src/pymatgen/analysis/structure_prediction/dopant_predictor.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ferroelectricity
copying src/pymatgen/analysis/ferroelectricity/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ferroelectricity
copying src/pymatgen/analysis/ferroelectricity/polarization.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ferroelectricity
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
copying src/pymatgen/analysis/magnetism/analyzer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
copying src/pymatgen/analysis/magnetism/heisenberg.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
copying src/pymatgen/analysis/magnetism/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
copying src/pymatgen/analysis/magnetism/jahnteller.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/core.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/neutron.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/tem.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/xrd.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/defs_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/func_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/chemenv_config.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/graph_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/chemenv_errors.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/math_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/scripts_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
copying src/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
copying src/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
copying src/pymatgen/analysis/chemenv/connectivity/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
copying src/pymatgen/analysis/chemenv/connectivity/environment_nodes.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
copying src/pymatgen/analysis/chemenv/connectivity/structure_connectivity.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
copying src/pymatgen/analysis/chemenv/connectivity/connectivity_finder.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
copying src/pymatgen/analysis/chemenv/connectivity/connected_components.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/sets.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/help.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/optics.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb
copying src/pymatgen/io/xtb/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb
copying src/pymatgen/io/xtb/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb
copying src/pymatgen/io/xtb/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
copying src/pymatgen/io/cp2k/utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
copying src/pymatgen/io/cp2k/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
copying src/pymatgen/io/cp2k/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
copying src/pymatgen/io/cp2k/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
copying src/pymatgen/io/cp2k/sets.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/exciting
copying src/pymatgen/io/exciting/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/exciting
copying src/pymatgen/io/exciting/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/exciting
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/sets.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/data.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/generators.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
copying src/pymatgen/io/lammps/sets.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat
copying src/pymatgen/io/pwmat/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat
copying src/pymatgen/io/pwmat/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat
copying src/pymatgen/io/pwmat/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster
copying src/pymatgen/io/lobster/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster
copying src/pymatgen/io/lobster/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster
copying src/pymatgen/io/lobster/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster
copying src/pymatgen/io/lobster/lobsterenv.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/aims
copying src/pymatgen/io/aims/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims
copying src/pymatgen/io/aims/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims
copying src/pymatgen/io/aims/parsers.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims
copying src/pymatgen/io/aims/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
copying src/pymatgen/io/qchem/utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
copying src/pymatgen/io/qchem/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
copying src/pymatgen/io/qchem/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
copying src/pymatgen/io/qchem/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
copying src/pymatgen/io/qchem/sets.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/netcdf.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/pseudos.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/variable.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/abitimer.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
copying src/pymatgen/io/abinit/abiobjects.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/jelstep.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/jdftxinfile_ref_options.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/joutstructures.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/outputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/joutstructure.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/jdftxoutfileslice.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/generic_tags.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/inputs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/jdftxinfile_master_format.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/_output_utils.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
copying src/pymatgen/io/jdftx/jminsettings.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/io/aims/sets/base.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/io/aims/sets/core.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/io/aims/sets/__init__.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/io/aims/sets/bs.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/io/aims/sets/magnetism.py -> build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets
copying src/pymatgen/py.typed -> build/lib.linux-armv7l-cpython-313/pymatgen
copying src/pymatgen/core/func_groups.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/reconstructions_archive.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/periodic_table.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/bond_lengths.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/quad_data.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/core/libxc_docs.json -> build/lib.linux-armv7l-cpython-313/pymatgen/core
copying src/pymatgen/entries/exp_compounds.json.gz -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/calc_compounds.json.gz -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/MPCompatibility.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/MITCompatibility.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
copying src/pymatgen/entries/MP2020Compatibility.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/entries
creating build/lib.linux-armv7l-cpython-313/pymatgen/entries/data
copying src/pymatgen/entries/data/g_els.json -> build/lib.linux-armv7l-cpython-313/pymatgen/entries/data
copying src/pymatgen/entries/data/nist_gas_gf.json -> build/lib.linux-armv7l-cpython-313/pymatgen/entries/data
copying src/pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/hhi_data.csv -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/costdb_elements.csv -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/aflow_prototypes.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/ionic_radii.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/cn_opt_params.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/bvparam_1991.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/bonds_jmol_ob.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/op_params.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/icsd_bv.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/analysis/vesta_cutoffs.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis
copying src/pymatgen/symmetry/symm_ops.json -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/symm_data.json -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/symm_data_magnetic.sqlite -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/symm_data.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/symmetry/symm_ops.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/symmetry
copying src/pymatgen/util/plotly_pd_layouts.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/plotly_chempot_layouts.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util
copying src/pymatgen/util/plotly_interface_rxn_layouts.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util
creating build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Si.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/LiFePO4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Li10GeP2S12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/TiO2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/SrTiO3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Li3V2(PO4)3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/K2O2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/TlBiSe2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Sn.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/SiO2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/VO2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Graphite.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/NaFePO4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/BaNiO3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Li2O.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/He_BCC.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/La2CoO4F.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/CsCl.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Li2O2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Pb2TiZrO6.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/util/structures/Si_SiO2_Interface.json -> build/lib.linux-armv7l-cpython-313/pymatgen/util/structures
copying src/pymatgen/vis/ElementColorSchemes.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/vis
copying src/pymatgen/analysis/solar/am1.5G.dat -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying src/pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction
creating build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/data
copying src/pymatgen/analysis/structure_prediction/data/pair_correlation.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/data
copying src/pymatgen/analysis/structure_prediction/data/lambda.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/data
copying src/pymatgen/analysis/magnetism/default_magmoms.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism
copying src/pymatgen/analysis/diffraction/atomic_scattering_params.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/analysis/diffraction/neutron_scattering_length.json -> build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction
copying src/pymatgen/io/vasp/vasp_potcar_file_hashes.json -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/incar_parameters.json -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/vasp_potcar_pymatgen_hashes.json -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/potcar-summary-stats.json.bz2 -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/PBE54Base.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MITRelaxSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MPHSERelaxSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MatPESStaticSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/PBE64Base.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MPRelaxSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/vdW_parameters.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MVLGWSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MVLRelax52Set.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/VASPIncarBase.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MPAbsorptionSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MP24RelaxSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/vasp/MPSCANRelaxSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp
copying src/pymatgen/io/feff/MPEXELFSSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/MPELNESSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/MPXANESSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/feff/MPEXAFSSet.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/feff
copying src/pymatgen/io/lammps/CoeffsDataType.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates
copying src/pymatgen/io/lammps/templates/thermalization.template -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates
copying src/pymatgen/io/lammps/templates/md.template -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates
copying src/pymatgen/io/lammps/templates/minimization.template -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates
copying src/pymatgen/io/lammps/templates/msd.template -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates
creating build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis
copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis
copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_min.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis
copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml -> build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis
running build_ext
Compiling src/pymatgen/optimization/linear_assignment.pyx because it changed.
[1/1] Cythonizing src/pymatgen/optimization/linear_assignment.pyx
building 'pymatgen.optimization.linear_assignment' extension
creating build/temp.linux-armv7l-cpython-313/src/pymatgen/optimization
arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/pymatgen/optimization/linear_assignment.c -o build/temp.linux-armv7l-cpython-313/src/pymatgen/optimization/linear_assignment.o
In file included from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from src/pymatgen/optimization/linear_assignment.c:1240:
/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/src/pymatgen/optimization/linear_assignment.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/pymatgen/optimization/linear_assignment.cpython-313-arm-linux-gnueabihf.so
performance hint: src/pymatgen/util/coord_cython.pyx:36:5: Exception check on 'dot_2d' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'dot_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'dot_2d' to allow an error code to be returned.
performance hint: src/pymatgen/util/coord_cython.pyx:51:5: Exception check on 'dot_2d_mod' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'dot_2d_mod' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'dot_2d_mod' to allow an error code to be returned.
warning: src/pymatgen/util/coord_cython.pyx:219:25: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: src/pymatgen/util/coord_cython.pyx:268:41: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
Compiling src/pymatgen/util/coord_cython.pyx because it changed.
[1/1] Cythonizing src/pymatgen/util/coord_cython.pyx
building 'pymatgen.util.coord_cython' extension
creating build/temp.linux-armv7l-cpython-313/src/pymatgen/util
arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/pymatgen/util/coord_cython.c -o build/temp.linux-armv7l-cpython-313/src/pymatgen/util/coord_cython.o
In file included from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from src/pymatgen/util/coord_cython.c:1240:
/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/src/pymatgen/util/coord_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/pymatgen/util/coord_cython.cpython-313-arm-linux-gnueabihf.so
performance hint: src/pymatgen/optimization/neighbors.pyx:525:5: Exception check on 'get_bounds' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_bounds' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_bounds' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:552:5: Exception check on 'get_frac_coords' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_frac_coords' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_frac_coords' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:564:5: Exception check on 'matmul' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'matmul' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'matmul' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:582:5: Exception check on 'matrix_inv' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'matrix_inv' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'matrix_inv' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:610:5: Exception check on 'get_max_rep' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_max_rep' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_max_rep' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:626:5: Exception check on 'get_reciprocal_lattice' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_reciprocal_lattice' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_reciprocal_lattice' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:641:5: Exception check on 'recip_component' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'recip_component' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'recip_component' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:675:5: Exception check on 'cross' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'cross' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:702:5: Exception check on 'get_max_and_min' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_max_and_min' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_max_and_min' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:726:5: Exception check on 'compute_cube_index' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'compute_cube_index' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'compute_cube_index' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:743:5: Exception check on 'three_to_one' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'three_to_one' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'three_to_one' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:778:5: Exception check on 'offset_cube' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'offset_cube' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'offset_cube' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:496:27: Exception check after calling 'offset_cube' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'offset_cube' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'offset_cube' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:541:19: Exception check after calling 'get_max_and_min' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'get_max_and_min' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'get_max_and_min' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:561:14: Exception check after calling 'matrix_inv' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'matrix_inv' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'matrix_inv' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:562:10: Exception check after calling 'matmul' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'matmul' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'matmul' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:635:23: Exception check after calling 'recip_component' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'recip_component' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'recip_component' to allow an error code to be returned.
performance hint: src/pymatgen/optimization/neighbors.pyx:655:9: Exception check after calling 'cross' will always require the GIL to be acquired.
Possible solutions:
1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2. Use an 'int' return type on 'cross' to allow an error code to be returned.
Compiling src/pymatgen/optimization/neighbors.pyx because it changed.
[1/1] Cythonizing src/pymatgen/optimization/neighbors.pyx
building 'pymatgen.optimization.neighbors' extension
arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/pymatgen/optimization/neighbors.c -o build/temp.linux-armv7l-cpython-313/src/pymatgen/optimization/neighbors.o
In file included from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from src/pymatgen/optimization/neighbors.c:1241:
/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
src/pymatgen/optimization/neighbors.c: In function '__pyx_pf_8pymatgen_12optimization_9neighbors_find_points_in_spheres':
src/pymatgen/optimization/neighbors.c:21919:97: warning: passing argument 3 of '__pyx_f_8pymatgen_12optimization_9neighbors_get_bounds' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
21919 | __pyx_f_8pymatgen_12optimization_9neighbors_get_bounds(__pyx_v_frac_coords, __pyx_v_max_rep, (&(*((__pyx_t_5numpy_int64_t const *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int64_t const *) __pyx_v_pbc.data) + __pyx_t_30)) )))), __pyx_v_max_bounds, __pyx_v_min_bounds); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 172, __pyx_L1_error)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/pymatgen/optimization/neighbors.c:3263:98: note: expected '__pyx_t_5numpy_int64_t *' {aka 'long long int *'} but argument is of type 'const __pyx_t_5numpy_int64_t *' {aka 'const long long int *'}
3263 | static void __pyx_f_8pymatgen_12optimization_9neighbors_get_bounds(__Pyx_memviewslice, double *, __pyx_t_5numpy_int64_t *, __pyx_t_5numpy_int64_t *, __pyx_t_5numpy_int64_t *); /*proto*/
| ^~~~~~~~~~~~~~~~~~~~~~~~
src/pymatgen/optimization/neighbors.c: In function '__pyx_f_8pymatgen_12optimization_9neighbors_recip_component':
src/pymatgen/optimization/neighbors.c:25983:54: warning: passing argument 1 of '__pyx_f_8pymatgen_12optimization_9neighbors_cross' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
25983 | __pyx_f_8pymatgen_12optimization_9neighbors_cross((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a2.data) + __pyx_t_1)) )))), (&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a3.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 655, __pyx_L1_error)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/pymatgen/optimization/neighbors.c:3272:63: note: expected 'double *' but argument is of type 'const double *'
3272 | static void __pyx_f_8pymatgen_12optimization_9neighbors_cross(double *, double *, double *); /*proto*/
| ^~~~~~~~
src/pymatgen/optimization/neighbors.c:25983:158: warning: passing argument 2 of '__pyx_f_8pymatgen_12optimization_9neighbors_cross' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
25983 | __pyx_f_8pymatgen_12optimization_9neighbors_cross((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a2.data) + __pyx_t_1)) )))), (&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a3.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 655, __pyx_L1_error)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/pymatgen/optimization/neighbors.c:3272:73: note: expected 'double *' but argument is of type 'const double *'
3272 | static void __pyx_f_8pymatgen_12optimization_9neighbors_cross(double *, double *, double *); /*proto*/
| ^~~~~~~~
src/pymatgen/optimization/neighbors.c:25993:66: warning: passing argument 1 of '__pyx_f_8pymatgen_12optimization_9neighbors_inner' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
25993 | __pyx_t_3 = __pyx_f_8pymatgen_12optimization_9neighbors_inner((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a1.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__pyx_t_3 == ((double)-1) && __Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 656, __pyx_L1_error)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/pymatgen/optimization/neighbors.c:3271:65: note: expected 'double *' but argument is of type 'const double *'
3271 | static double __pyx_f_8pymatgen_12optimization_9neighbors_inner(double *, double *); /*proto*/
| ^~~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2025.2.18+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/src/pymatgen/optimization/neighbors.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/pymatgen/optimization/neighbors.cpython-313-arm-linux-gnueabihf.so
installing to build/bdist.linux-armv7l/wheel
running install
running install_lib
creating build/bdist.linux-armv7l/wheel
creating build/bdist.linux-armv7l/wheel/pymatgen
creating build/bdist.linux-armv7l/wheel/pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/vampire_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/bader_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/critic2_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/gulp_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/mcsqs_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/enumlib_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
copying build/lib.linux-armv7l-cpython-313/pymatgen/command_line/chargemol_caller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/command_line
creating build/bdist.linux-armv7l/wheel/pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/trajectory.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/molecular_orbitals.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/surface.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/xcfunc.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/operations.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/periodic_table.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/composition.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/tensors.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/func_groups.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/structure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/interface.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/sites.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/spectrum.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/reconstructions_archive.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/libxcfunc.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/periodic_table.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/bonds.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/bond_lengths.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/ion.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/quad_data.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/units.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/lattice.py -> build/bdist.linux-armv7l/wheel/./pymatgen/core
copying build/lib.linux-armv7l-cpython-313/pymatgen/core/libxc_docs.json -> build/bdist.linux-armv7l/wheel/./pymatgen/core
creating build/bdist.linux-armv7l/wheel/pymatgen/apps
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps
creating build/bdist.linux-armv7l/wheel/pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/analyzer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/conversion_battery.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/insertion_battery.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/plotter.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/battery/battery_abc.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/battery
creating build/bdist.linux-armv7l/wheel/pymatgen/apps/borg
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/borg
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg/queen.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/borg
copying build/lib.linux-armv7l-cpython-313/pymatgen/apps/borg/hive.py -> build/bdist.linux-armv7l/wheel/./pymatgen/apps/borg
creating build/bdist.linux-armv7l/wheel/pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/boltztrap2.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/bandstructure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/core.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/plotter.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/cohp.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/dos.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
copying build/lib.linux-armv7l-cpython-313/pymatgen/electronic_structure/boltztrap.py -> build/bdist.linux-armv7l/wheel/./pymatgen/electronic_structure
creating build/bdist.linux-armv7l/wheel/pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/computed_entries.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/MPCompatibility.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/entry_tools.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/exp_compounds.json.gz -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
creating build/bdist.linux-armv7l/wheel/pymatgen/entries/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/data/g_els.json -> build/bdist.linux-armv7l/wheel/./pymatgen/entries/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/data/nist_gas_gf.json -> build/bdist.linux-armv7l/wheel/./pymatgen/entries/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/compatibility.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/correction_calculator.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/mixing_scheme.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/exp_entries.py -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/MITCompatibility.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/calc_compounds.json.gz -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
copying build/lib.linux-armv7l-cpython-313/pymatgen/entries/MP2020Compatibility.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/entries
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/cn_opt_params.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/aflow_prototypes.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/elasticity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity/strain.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/elasticity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity/elastic.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/elasticity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/elasticity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/elasticity/stress.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/elasticity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/molecule_matcher.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/topological
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/topological/spillage.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/topological
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/topological/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/topological
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/eos.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interface_reactions.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/thermochemistry.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/bvparam_1991.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/quasirrho.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/bonds_jmol_ob.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/molecule_structure_comparator.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/bond_dissociation.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/wulff.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/excitation.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/gb
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/gb/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/gb
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/gb/grain.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/gb
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/interfaces
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces/coherent_interfaces.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/interfaces
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces/zsl.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/interfaces
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces/substrate_analyzer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/interfaces
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/interfaces/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/interfaces
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/pourbaix_diagram.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/surface_analysis.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/dimensionality.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/solar
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar/am1.5G.dat -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/solar
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/solar
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/solar/slme.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/solar
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/nmr.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/piezo_sensitivity.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/hhi_data.csv -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/piezo.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/xas
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xas/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/xas
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xas/spectrum.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/xas
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ionic_radii.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/adsorption.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/cost.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/functional_groups.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/chemenv
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/defs_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/func_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/chemenv_config.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/graph_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/chemenv_errors.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/math_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/scripts_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/utils
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/chemenv/coordination_environments
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/coordination_environments
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity/environment_nodes.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity/structure_connectivity.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity/connectivity_finder.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/connectivity/connected_components.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv/connectivity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chemenv/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/chemenv
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/op_params.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/icsd_bv.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ewald.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/vesta_cutoffs.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/structure_prediction
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/structure_prediction/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/data/pair_correlation.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/data/lambda.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction/data
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/substitutor.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/substitution_probability.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/volume_predictor.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_prediction/dopant_predictor.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/structure_prediction
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/ferroelectricity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ferroelectricity/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/ferroelectricity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/ferroelectricity/polarization.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/ferroelectricity
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_matcher.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/quasiharmonic.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/costdb_elements.csv -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/transition_state.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/graphs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/reaction_calculator.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/phase_diagram.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/prototypes.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/hhi.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/xps.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/disorder.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/local_env.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/structure_analyzer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/chempot_diagram.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/energy_models.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/fragmenter.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/magnetism
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism/analyzer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/magnetism
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism/heisenberg.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/magnetism
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/magnetism
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism/default_magmoms.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/magnetism
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/magnetism/jahnteller.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/magnetism
creating build/bdist.linux-armv7l/wheel/pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/core.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/neutron.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/tem.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/atomic_scattering_params.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/neutron_scattering_length.json -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/diffraction/xrd.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis/diffraction
copying build/lib.linux-armv7l-cpython-313/pymatgen/analysis/bond_valence.py -> build/bdist.linux-armv7l/wheel/./pymatgen/analysis
creating build/bdist.linux-armv7l/wheel/pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/analyzer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/bandstructure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/symm_data_magnetic.sqlite -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/maggroups.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/groups.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/kpath.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/symm_data.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/symm_ops.json -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/structure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/settings.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/symm_ops.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/symm_data.json -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
copying build/lib.linux-armv7l-cpython-313/pymatgen/symmetry/site_symmetries.py -> build/bdist.linux-armv7l/wheel/./pymatgen/symmetry
creating build/bdist.linux-armv7l/wheel/pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/graph_hashing.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/due.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/plotly_pd_layouts.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/misc.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/num.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/plotly_chempot_layouts.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/string.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/typing.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/plotting.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/provenance.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/io_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/testing.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/coord.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/coord_cython.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/numba.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
creating build/bdist.linux-armv7l/wheel/pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Si.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/LiFePO4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Li10GeP2S12.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/TiO2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/SrTiO3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Li3V2(PO4)3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/K2O2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/TlBiSe2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Sn.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/SiO2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/VO2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Graphite.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/NaFePO4.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/BaNiO3.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Li2O.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/He_BCC.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/La2CoO4F.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/CsCl.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Li2O2.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Pb2TiZrO6.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/structures/Si_SiO2_Interface.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util/structures
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/joblib.py -> build/bdist.linux-armv7l/wheel/./pymatgen/util
copying build/lib.linux-armv7l-cpython-313/pymatgen/util/plotly_interface_rxn_layouts.json -> build/bdist.linux-armv7l/wheel/./pymatgen/util
creating build/bdist.linux-armv7l/wheel/pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/adf.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lmto.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/packmol.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/babel.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/gaussian.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/shengbte.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/pwscf.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/core.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/atat.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xr.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
creating build/bdist.linux-armv7l/wheel/pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/potcar-summary-stats.json.bz2 -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/PBE54Base.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MITRelaxSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MPHSERelaxSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/vasp_potcar_file_hashes.json -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MatPESStaticSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/PBE64Base.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/incar_parameters.json -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MPRelaxSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/vasp_potcar_pymatgen_hashes.json -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/vdW_parameters.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MVLGWSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MVLRelax52Set.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/VASPIncarBase.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MPAbsorptionSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/sets.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MP24RelaxSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/MPSCANRelaxSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/help.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/vasp/optics.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/vasp
creating build/bdist.linux-armv7l/wheel/pymatgen/io/xtb
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/xtb
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/xtb
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xtb/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/xtb
creating build/bdist.linux-armv7l/wheel/pymatgen/io/cp2k
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k/utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/cp2k
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/cp2k
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/cp2k
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/cp2k
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cp2k/sets.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/cp2k
creating build/bdist.linux-armv7l/wheel/pymatgen/io/exciting
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/exciting/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/exciting
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/exciting/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/exciting
creating build/bdist.linux-armv7l/wheel/pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/MPEXELFSSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/MPELNESSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/MPXANESSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/MPEXAFSSet.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/feff/sets.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/feff
creating build/bdist.linux-armv7l/wheel/pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/data.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
creating build/bdist.linux-armv7l/wheel/pymatgen/io/lammps/templates
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates/thermalization.template -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps/templates
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates/md.template -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps/templates
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates/minimization.template -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps/templates
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/templates/msd.template -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps/templates
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/generators.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/CoeffsDataType.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lammps/sets.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lammps
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/prismatic.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/res.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/wannier90.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/multiwfn.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cif.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
creating build/bdist.linux-armv7l/wheel/pymatgen/io/pwmat
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/pwmat
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/pwmat
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/pwmat/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/pwmat
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/phonopy.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/optimade.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/zeopp.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xcrysden.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
creating build/bdist.linux-armv7l/wheel/pymatgen/io/lobster
creating build/bdist.linux-armv7l/wheel/pymatgen/io/lobster/lobster_basis
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster/lobster_basis
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_min.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster/lobster_basis
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster/lobster_basis
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/lobster/lobsterenv.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/lobster
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/icet.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/cssr.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/openff.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/common.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
creating build/bdist.linux-armv7l/wheel/pymatgen/io/aims
creating build/bdist.linux-armv7l/wheel/pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets/base.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets/core.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets/bs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/sets/magnetism.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims/sets
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/parsers.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/aims/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/aims
creating build/bdist.linux-armv7l/wheel/pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/qchem/sets.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/qchem
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/xyz.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jarvis.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/template.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/fiesta.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/nwchem.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/ase.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io
creating build/bdist.linux-armv7l/wheel/pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/netcdf.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/pseudos.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/variable.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/abitimer.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/abinit/abiobjects.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/abinit
creating build/bdist.linux-armv7l/wheel/pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/jelstep.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/jdftxinfile_ref_options.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/joutstructures.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/outputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/joutstructure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/jdftxoutfileslice.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/generic_tags.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/inputs.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/jdftxinfile_master_format.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/_output_utils.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/io/jdftx/jminsettings.py -> build/bdist.linux-armv7l/wheel/./pymatgen/io/jdftx
copying build/lib.linux-armv7l-cpython-313/pymatgen/dao.py -> build/bdist.linux-armv7l/wheel/./pymatgen
creating build/bdist.linux-armv7l/wheel/pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/get_environment.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg_config.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/feff_plot_dos.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/feff_plot_cross_section.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg_analyze.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg_potcar.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg_plot.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
copying build/lib.linux-armv7l-cpython-313/pymatgen/cli/pmg_structure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/cli
creating build/bdist.linux-armv7l/wheel/pymatgen/vis
copying build/lib.linux-armv7l-cpython-313/pymatgen/vis/plotters.py -> build/bdist.linux-armv7l/wheel/./pymatgen/vis
copying build/lib.linux-armv7l-cpython-313/pymatgen/vis/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/vis
copying build/lib.linux-armv7l-cpython-313/pymatgen/vis/structure_vtk.py -> build/bdist.linux-armv7l/wheel/./pymatgen/vis
copying build/lib.linux-armv7l-cpython-313/pymatgen/vis/ElementColorSchemes.yaml -> build/bdist.linux-armv7l/wheel/./pymatgen/vis
copying build/lib.linux-armv7l-cpython-313/pymatgen/vis/structure_chemview.py -> build/bdist.linux-armv7l/wheel/./pymatgen/vis
creating build/bdist.linux-armv7l/wheel/pymatgen/ext
copying build/lib.linux-armv7l-cpython-313/pymatgen/ext/matproj_legacy.py -> build/bdist.linux-armv7l/wheel/./pymatgen/ext
copying build/lib.linux-armv7l-cpython-313/pymatgen/ext/optimade.py -> build/bdist.linux-armv7l/wheel/./pymatgen/ext
copying build/lib.linux-armv7l-cpython-313/pymatgen/ext/cod.py -> build/bdist.linux-armv7l/wheel/./pymatgen/ext
copying build/lib.linux-armv7l-cpython-313/pymatgen/ext/matproj.py -> build/bdist.linux-armv7l/wheel/./pymatgen/ext
creating build/bdist.linux-armv7l/wheel/pymatgen/transformations
copying build/lib.linux-armv7l-cpython-313/pymatgen/transformations/site_transformations.py -> build/bdist.linux-armv7l/wheel/./pymatgen/transformations
copying build/lib.linux-armv7l-cpython-313/pymatgen/transformations/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/transformations
copying build/lib.linux-armv7l-cpython-313/pymatgen/transformations/standard_transformations.py -> build/bdist.linux-armv7l/wheel/./pymatgen/transformations
copying build/lib.linux-armv7l-cpython-313/pymatgen/transformations/transformation_abc.py -> build/bdist.linux-armv7l/wheel/./pymatgen/transformations
copying build/lib.linux-armv7l-cpython-313/pymatgen/transformations/advanced_transformations.py -> build/bdist.linux-armv7l/wheel/./pymatgen/transformations
creating build/bdist.linux-armv7l/wheel/pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/bandstructure.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/ir_spectra.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/gruneisen.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/plotter.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/thermal_displacements.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
copying build/lib.linux-armv7l-cpython-313/pymatgen/phonon/dos.py -> build/bdist.linux-armv7l/wheel/./pymatgen/phonon
creating build/bdist.linux-armv7l/wheel/pymatgen/optimization
copying build/lib.linux-armv7l-cpython-313/pymatgen/optimization/linear_assignment.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pymatgen/optimization
copying build/lib.linux-armv7l-cpython-313/pymatgen/optimization/neighbors.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pymatgen/optimization
copying build/lib.linux-armv7l-cpython-313/pymatgen/optimization/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/optimization
copying build/lib.linux-armv7l-cpython-313/pymatgen/py.typed -> build/bdist.linux-armv7l/wheel/./pymatgen
creating build/bdist.linux-armv7l/wheel/pymatgen/alchemy
copying build/lib.linux-armv7l-cpython-313/pymatgen/alchemy/filters.py -> build/bdist.linux-armv7l/wheel/./pymatgen/alchemy
copying build/lib.linux-armv7l-cpython-313/pymatgen/alchemy/__init__.py -> build/bdist.linux-armv7l/wheel/./pymatgen/alchemy
copying build/lib.linux-armv7l-cpython-313/pymatgen/alchemy/materials.py -> build/bdist.linux-armv7l/wheel/./pymatgen/alchemy
copying build/lib.linux-armv7l-cpython-313/pymatgen/alchemy/transmuters.py -> build/bdist.linux-armv7l/wheel/./pymatgen/alchemy
running install_egg_info
running egg_info
creating src/pymatgen.egg-info
writing src/pymatgen.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/setuptools/_core_metadata.py:162: SetuptoolsDeprecationWarning: Invalid config.
!!
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newlines are not allowed in `summary` and will break in the future
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!!
write_field('Summary', single_line(summary))
writing dependency_links to src/pymatgen.egg-info/dependency_links.txt
writing entry points to src/pymatgen.egg-info/entry_points.txt
writing requirements to src/pymatgen.egg-info/requires.txt
writing top-level names to src/pymatgen.egg-info/top_level.txt
writing manifest file 'src/pymatgen.egg-info/SOURCES.txt'
reading manifest file 'src/pymatgen.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'src/pymatgen.egg-info/SOURCES.txt'
Copying src/pymatgen.egg-info to build/bdist.linux-armv7l/wheel/./pymatgen-2025.2.18.egg-info
running install_scripts
creating build/bdist.linux-armv7l/wheel/pymatgen-2025.2.18.dist-info/WHEEL
creating '/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/.tmp-wccq__1f/pymatgen-2025.2.18-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
adding 'pymatgen/dao.py'
adding 'pymatgen/py.typed'
adding 'pymatgen/alchemy/__init__.py'
adding 'pymatgen/alchemy/filters.py'
adding 'pymatgen/alchemy/materials.py'
adding 'pymatgen/alchemy/transmuters.py'
adding 'pymatgen/analysis/adsorption.py'
adding 'pymatgen/analysis/aflow_prototypes.json'
adding 'pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv'
adding 'pymatgen/analysis/bond_dissociation.py'
adding 'pymatgen/analysis/bond_valence.py'
adding 'pymatgen/analysis/bonds_jmol_ob.yaml'
adding 'pymatgen/analysis/bvparam_1991.yaml'
adding 'pymatgen/analysis/chempot_diagram.py'
adding 'pymatgen/analysis/cn_opt_params.yaml'
adding 'pymatgen/analysis/cost.py'
adding 'pymatgen/analysis/costdb_elements.csv'
adding 'pymatgen/analysis/dimensionality.py'
adding 'pymatgen/analysis/disorder.py'
adding 'pymatgen/analysis/energy_models.py'
adding 'pymatgen/analysis/eos.py'
adding 'pymatgen/analysis/ewald.py'
adding 'pymatgen/analysis/excitation.py'
adding 'pymatgen/analysis/fragmenter.py'
adding 'pymatgen/analysis/functional_groups.py'
adding 'pymatgen/analysis/graphs.py'
adding 'pymatgen/analysis/hhi.py'
adding 'pymatgen/analysis/hhi_data.csv'
adding 'pymatgen/analysis/icsd_bv.yaml'
adding 'pymatgen/analysis/interface_reactions.py'
adding 'pymatgen/analysis/ionic_radii.json'
adding 'pymatgen/analysis/local_env.py'
adding 'pymatgen/analysis/molecule_matcher.py'
adding 'pymatgen/analysis/molecule_structure_comparator.py'
adding 'pymatgen/analysis/nmr.py'
adding 'pymatgen/analysis/op_params.yaml'
adding 'pymatgen/analysis/phase_diagram.py'
adding 'pymatgen/analysis/piezo.py'
adding 'pymatgen/analysis/piezo_sensitivity.py'
adding 'pymatgen/analysis/pourbaix_diagram.py'
adding 'pymatgen/analysis/prototypes.py'
adding 'pymatgen/analysis/quasiharmonic.py'
adding 'pymatgen/analysis/quasirrho.py'
adding 'pymatgen/analysis/reaction_calculator.py'
adding 'pymatgen/analysis/structure_analyzer.py'
adding 'pymatgen/analysis/structure_matcher.py'
adding 'pymatgen/analysis/surface_analysis.py'
adding 'pymatgen/analysis/thermochemistry.py'
adding 'pymatgen/analysis/transition_state.py'
adding 'pymatgen/analysis/vesta_cutoffs.yaml'
adding 'pymatgen/analysis/wulff.py'
adding 'pymatgen/analysis/xps.py'
adding 'pymatgen/analysis/chemenv/__init__.py'
adding 'pymatgen/analysis/chemenv/connectivity/__init__.py'
adding 'pymatgen/analysis/chemenv/connectivity/connected_components.py'
adding 'pymatgen/analysis/chemenv/connectivity/connectivity_finder.py'
adding 'pymatgen/analysis/chemenv/connectivity/environment_nodes.py'
adding 'pymatgen/analysis/chemenv/connectivity/structure_connectivity.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/__init__.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/structure_environments.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/voronoi.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json'
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adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py'
adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt'
adding 'pymatgen/analysis/chemenv/utils/__init__.py'
adding 'pymatgen/analysis/chemenv/utils/chemenv_config.py'
adding 'pymatgen/analysis/chemenv/utils/chemenv_errors.py'
adding 'pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py'
adding 'pymatgen/analysis/chemenv/utils/defs_utils.py'
adding 'pymatgen/analysis/chemenv/utils/func_utils.py'
adding 'pymatgen/analysis/chemenv/utils/graph_utils.py'
adding 'pymatgen/analysis/chemenv/utils/math_utils.py'
adding 'pymatgen/analysis/chemenv/utils/scripts_utils.py'
adding 'pymatgen/analysis/diffraction/__init__.py'
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adding 'pymatgen/analysis/elasticity/__init__.py'
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adding 'pymatgen/analysis/elasticity/strain.py'
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adding 'pymatgen/analysis/ferroelectricity/polarization.py'
adding 'pymatgen/analysis/gb/__init__.py'
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adding 'pymatgen/analysis/interfaces/coherent_interfaces.py'
adding 'pymatgen/analysis/interfaces/substrate_analyzer.py'
adding 'pymatgen/analysis/interfaces/zsl.py'
adding 'pymatgen/analysis/magnetism/__init__.py'
adding 'pymatgen/analysis/magnetism/analyzer.py'
adding 'pymatgen/analysis/magnetism/default_magmoms.yaml'
adding 'pymatgen/analysis/magnetism/heisenberg.py'
adding 'pymatgen/analysis/magnetism/jahnteller.py'
adding 'pymatgen/analysis/solar/__init__.py'
adding 'pymatgen/analysis/solar/am1.5G.dat'
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adding 'pymatgen/analysis/structure_prediction/DLS_bond_params.yaml'
adding 'pymatgen/analysis/structure_prediction/__init__.py'
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adding 'pymatgen/analysis/structure_prediction/volume_predictor.py'
adding 'pymatgen/analysis/structure_prediction/data/lambda.json'
adding 'pymatgen/analysis/structure_prediction/data/pair_correlation.json'
adding 'pymatgen/analysis/topological/__init__.py'
adding 'pymatgen/analysis/topological/spillage.py'
adding 'pymatgen/analysis/xas/__init__.py'
adding 'pymatgen/analysis/xas/spectrum.py'
adding 'pymatgen/apps/__init__.py'
adding 'pymatgen/apps/battery/__init__.py'
adding 'pymatgen/apps/battery/analyzer.py'
adding 'pymatgen/apps/battery/battery_abc.py'
adding 'pymatgen/apps/battery/conversion_battery.py'
adding 'pymatgen/apps/battery/insertion_battery.py'
adding 'pymatgen/apps/battery/plotter.py'
adding 'pymatgen/apps/borg/__init__.py'
adding 'pymatgen/apps/borg/hive.py'
adding 'pymatgen/apps/borg/queen.py'
adding 'pymatgen/cli/__init__.py'
adding 'pymatgen/cli/feff_plot_cross_section.py'
adding 'pymatgen/cli/feff_plot_dos.py'
adding 'pymatgen/cli/get_environment.py'
adding 'pymatgen/cli/pmg.py'
adding 'pymatgen/cli/pmg_analyze.py'
adding 'pymatgen/cli/pmg_config.py'
adding 'pymatgen/cli/pmg_plot.py'
adding 'pymatgen/cli/pmg_potcar.py'
adding 'pymatgen/cli/pmg_structure.py'
adding 'pymatgen/command_line/__init__.py'
adding 'pymatgen/command_line/bader_caller.py'
adding 'pymatgen/command_line/chargemol_caller.py'
adding 'pymatgen/command_line/critic2_caller.py'
adding 'pymatgen/command_line/enumlib_caller.py'
adding 'pymatgen/command_line/gulp_caller.py'
adding 'pymatgen/command_line/mcsqs_caller.py'
adding 'pymatgen/command_line/vampire_caller.py'
adding 'pymatgen/core/__init__.py'
adding 'pymatgen/core/bond_lengths.json'
adding 'pymatgen/core/bonds.py'
adding 'pymatgen/core/composition.py'
adding 'pymatgen/core/func_groups.json'
adding 'pymatgen/core/interface.py'
adding 'pymatgen/core/ion.py'
adding 'pymatgen/core/lattice.py'
adding 'pymatgen/core/libxc_docs.json'
adding 'pymatgen/core/libxcfunc.py'
adding 'pymatgen/core/molecular_orbitals.py'
adding 'pymatgen/core/operations.py'
adding 'pymatgen/core/periodic_table.json'
adding 'pymatgen/core/periodic_table.py'
adding 'pymatgen/core/quad_data.json'
adding 'pymatgen/core/reconstructions_archive.json'
adding 'pymatgen/core/sites.py'
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adding 'pymatgen/core/xcfunc.py'
adding 'pymatgen/electronic_structure/__init__.py'
adding 'pymatgen/electronic_structure/bandstructure.py'
adding 'pymatgen/electronic_structure/boltztrap.py'
adding 'pymatgen/electronic_structure/boltztrap2.py'
adding 'pymatgen/electronic_structure/cohp.py'
adding 'pymatgen/electronic_structure/core.py'
adding 'pymatgen/electronic_structure/dos.py'
adding 'pymatgen/electronic_structure/plotter.py'
adding 'pymatgen/entries/MITCompatibility.yaml'
adding 'pymatgen/entries/MP2020Compatibility.yaml'
adding 'pymatgen/entries/MPCompatibility.yaml'
adding 'pymatgen/entries/__init__.py'
adding 'pymatgen/entries/calc_compounds.json.gz'
adding 'pymatgen/entries/compatibility.py'
adding 'pymatgen/entries/computed_entries.py'
adding 'pymatgen/entries/correction_calculator.py'
adding 'pymatgen/entries/entry_tools.py'
adding 'pymatgen/entries/exp_compounds.json.gz'
adding 'pymatgen/entries/exp_entries.py'
adding 'pymatgen/entries/mixing_scheme.py'
adding 'pymatgen/entries/data/g_els.json'
adding 'pymatgen/entries/data/nist_gas_gf.json'
adding 'pymatgen/ext/cod.py'
adding 'pymatgen/ext/matproj.py'
adding 'pymatgen/ext/matproj_legacy.py'
adding 'pymatgen/ext/optimade.py'
adding 'pymatgen/io/adf.py'
adding 'pymatgen/io/ase.py'
adding 'pymatgen/io/atat.py'
adding 'pymatgen/io/babel.py'
adding 'pymatgen/io/cif.py'
adding 'pymatgen/io/common.py'
adding 'pymatgen/io/core.py'
adding 'pymatgen/io/cssr.py'
adding 'pymatgen/io/fiesta.py'
adding 'pymatgen/io/gaussian.py'
adding 'pymatgen/io/icet.py'
adding 'pymatgen/io/jarvis.py'
adding 'pymatgen/io/lmto.py'
adding 'pymatgen/io/multiwfn.py'
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adding 'pymatgen/io/optimade.py'
adding 'pymatgen/io/packmol.py'
adding 'pymatgen/io/phonopy.py'
adding 'pymatgen/io/prismatic.py'
adding 'pymatgen/io/pwscf.py'
adding 'pymatgen/io/res.py'
adding 'pymatgen/io/shengbte.py'
adding 'pymatgen/io/template.py'
adding 'pymatgen/io/wannier90.py'
adding 'pymatgen/io/xcrysden.py'
adding 'pymatgen/io/xr.py'
adding 'pymatgen/io/xyz.py'
adding 'pymatgen/io/zeopp.py'
adding 'pymatgen/io/abinit/__init__.py'
adding 'pymatgen/io/abinit/abiobjects.py'
adding 'pymatgen/io/abinit/abitimer.py'
adding 'pymatgen/io/abinit/inputs.py'
adding 'pymatgen/io/abinit/netcdf.py'
adding 'pymatgen/io/abinit/pseudos.py'
adding 'pymatgen/io/abinit/variable.py'
adding 'pymatgen/io/aims/__init__.py'
adding 'pymatgen/io/aims/inputs.py'
adding 'pymatgen/io/aims/outputs.py'
adding 'pymatgen/io/aims/parsers.py'
adding 'pymatgen/io/aims/sets/__init__.py'
adding 'pymatgen/io/aims/sets/base.py'
adding 'pymatgen/io/aims/sets/bs.py'
adding 'pymatgen/io/aims/sets/core.py'
adding 'pymatgen/io/aims/sets/magnetism.py'
adding 'pymatgen/io/cp2k/__init__.py'
adding 'pymatgen/io/cp2k/inputs.py'
adding 'pymatgen/io/cp2k/outputs.py'
adding 'pymatgen/io/cp2k/sets.py'
adding 'pymatgen/io/cp2k/utils.py'
adding 'pymatgen/io/exciting/__init__.py'
adding 'pymatgen/io/exciting/inputs.py'
adding 'pymatgen/io/feff/MPELNESSet.yaml'
adding 'pymatgen/io/feff/MPEXAFSSet.yaml'
adding 'pymatgen/io/feff/MPEXELFSSet.yaml'
adding 'pymatgen/io/feff/MPXANESSet.yaml'
adding 'pymatgen/io/feff/__init__.py'
adding 'pymatgen/io/feff/inputs.py'
adding 'pymatgen/io/feff/outputs.py'
adding 'pymatgen/io/feff/sets.py'
adding 'pymatgen/io/jdftx/__init__.py'
adding 'pymatgen/io/jdftx/_output_utils.py'
adding 'pymatgen/io/jdftx/generic_tags.py'
adding 'pymatgen/io/jdftx/inputs.py'
adding 'pymatgen/io/jdftx/jdftxinfile_master_format.py'
adding 'pymatgen/io/jdftx/jdftxinfile_ref_options.py'
adding 'pymatgen/io/jdftx/jdftxoutfileslice.py'
adding 'pymatgen/io/jdftx/jelstep.py'
adding 'pymatgen/io/jdftx/jminsettings.py'
adding 'pymatgen/io/jdftx/joutstructure.py'
adding 'pymatgen/io/jdftx/joutstructures.py'
adding 'pymatgen/io/jdftx/outputs.py'
adding 'pymatgen/io/lammps/CoeffsDataType.yaml'
adding 'pymatgen/io/lammps/__init__.py'
adding 'pymatgen/io/lammps/data.py'
adding 'pymatgen/io/lammps/generators.py'
adding 'pymatgen/io/lammps/inputs.py'
adding 'pymatgen/io/lammps/outputs.py'
adding 'pymatgen/io/lammps/sets.py'
adding 'pymatgen/io/lammps/utils.py'
adding 'pymatgen/io/lammps/templates/md.template'
adding 'pymatgen/io/lammps/templates/minimization.template'
adding 'pymatgen/io/lammps/templates/msd.template'
adding 'pymatgen/io/lammps/templates/thermalization.template'
adding 'pymatgen/io/lobster/__init__.py'
adding 'pymatgen/io/lobster/inputs.py'
adding 'pymatgen/io/lobster/lobsterenv.py'
adding 'pymatgen/io/lobster/outputs.py'
adding 'pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml'
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adding 'pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml'
adding 'pymatgen/io/pwmat/__init__.py'
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adding 'pymatgen/io/qchem/utils.py'
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The 道 of Pymatgen
1. Great code enables great materials science.
2. Comprehensive tests ensure robustness.
3. Clear documentation leads to more usage.
4. More usage improves code quality (and increases citations).
5. Even complex scientific ideas can be broken down into simple interfaces.
6. Deep (Hulk-level) understanding is often necessary to develop the right interface design.
7. Slow and accurate is better than fast and wrong.
8. But efficiency matters for core classes.
9. Code entropy always increases in a closed system.
10. Constant refactoring is the hallmark of an open platform.
---
First Coder
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:12: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:20: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:24: ERROR: Unexpected indentation. [docutils]
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:54: ERROR: Unexpected indentation. [docutils]
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.VoronoiNN.get_voronoi_polyhedra:14: ERROR: Unexpected indentation. [docutils]
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.CompoundPhaseDiagram.num2str:6: WARNING: Field list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PDEntry.energy:1: WARNING: duplicate object description of pymatgen.analysis.phase_diagram.PDEntry.energy, other instance in pymatgen.analysis, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PDPlotter:23: ERROR: Unexpected indentation. [docutils]
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram:5: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram:9: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram.get_phase_separation_energy:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram.get_phase_separation_energy:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.order_phase_diagram:17: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox:17: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox.gruneisen_parameter:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox.gruneisen_parameter:9: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiharmonicDebyeApprox:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_analyzer.py:docstring of pymatgen.analysis.structure_analyzer.VoronoiAnalyzer:11: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher:15: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher.get_transformation:12: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:6: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:24: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:28: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/wulff.py:docstring of pymatgen.analysis.wulff.WulffShape.shape_factor:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/xps.py:docstring of pymatgen.analysis.xps.XPS:8: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/xps.py:docstring of pymatgen.analysis.xps.XPS:12: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:24: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:26: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:29: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:33: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py:docstring of pymatgen.analysis.chemenv.coordination_environments.coordination_geometries:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py:docstring of pymatgen.analysis.chemenv.coordination_environments.coordination_geometries:5: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:5: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:10: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:20: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:19: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:19: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:20: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:21: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:22: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:22: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Undefined substitution referenced: "p2-p1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Undefined substitution referenced: "p2-p1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator.cell_intensity:1: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/elasticity/elastic.py:docstring of pymatgen.analysis.elasticity.elastic.generate_pseudo:14: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization:34: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:7: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization.get_same_branch_polarization_data:35: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/magnetism/analyzer.py:docstring of pymatgen.analysis.magnetism.analyzer.CollinearMagneticStructureAnalyzer:14: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/magnetism/analyzer.py:docstring of pymatgen.analysis.magnetism.analyzer.CollinearMagneticStructureAnalyzer:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_prediction/substitutor.py:docstring of pymatgen.analysis.structure_prediction.substitutor.Substitutor.pred_from_list:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/structure_prediction/substitutor.py:docstring of pymatgen.analysis.structure_prediction.substitutor.Substitutor.pred_from_list:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/xas/spectrum.py:docstring of pymatgen.analysis.xas.spectrum.XAS.stitch:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/analysis/xas/spectrum.py:docstring of pymatgen.analysis.xas.spectrum.XAS.stitch:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.framework_formula:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.framework_formula, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.voltage_pairs:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.voltage_pairs, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion_entry:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion_entry, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.framework_formula:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.framework_formula, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mAh:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mAh, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.voltage:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.voltage, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.working_ion_entry:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.working_ion_entry, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionElectrode:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionElectrode:11: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.rxn:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.rxn, other instance in pymatgen.apps.battery, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:11: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:15: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller:25: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller:26: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller.Critic2Caller.from_chgcar:21: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller.Critic2Caller.from_chgcar:22: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/enumlib_caller.py:docstring of pymatgen.command_line.enumlib_caller:12: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/enumlib_caller.py:docstring of pymatgen.command_line.enumlib_caller:15: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/enumlib_caller.py:docstring of pymatgen.command_line.enumlib_caller:18: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/enumlib_caller.py:docstring of pymatgen.command_line.enumlib_caller:22: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:13: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/command_line/vampire_caller.py:docstring of pymatgen.command_line.vampire_caller.VampireCaller:74: ERROR: Unknown directive type "todo".
.. todo:: * Create input files in a temp folder that gets cleaned up after run terminates [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/bonds.py:docstring of pymatgen.core.bonds.obtain_all_bond_lengths:14: ERROR: Unknown directive type "todo".
.. todo:: it's better to avoid using float as dict keys. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition:8: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition:16: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition:76: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition:80: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition:100: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/composition.py:docstring of pymatgen.core.composition.Composition.to_data_dict:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/ion.py:docstring of pymatgen.core.ion.Ion.to_reduced_dict:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.A:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.A, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.X:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.X, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.Z:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.Z, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.oxi_state:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.oxi_state, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Element:218: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Element:229: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase:218: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase:229: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.atomic_orbitals_eV:1: WARNING: duplicate object description of pymatgen.core.periodic_table.ElementBase.atomic_orbitals_eV, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:1: WARNING: duplicate object description of pymatgen.core.periodic_table.ElementBase.electronic_structure, other instance in pymatgen.core, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.full_electronic_structure:18: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Species.electronic_structure:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Species.electronic_structure:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Species.full_electronic_structure:18: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.PeriodicSite:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.PeriodicSite:11: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.Site:12: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.Site:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/spectrum.py:docstring of pymatgen.core.spectrum.Spectrum:16: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/spectrum.py:docstring of pymatgen.core.spectrum.Spectrum:20: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/structure.py:docstring of pymatgen.core.structure.IStructure.matches:9: WARNING: Inline strong start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/structure.py:docstring of pymatgen.core.structure.PeriodicNeighbor:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface:8: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:29: ERROR: Unknown directive type "todo".
.. todo::
- Right now there is no way to specify what atom is being added.
Use basis sets in the future? [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:64: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:66: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:74: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.Slab.get_surface_sites:20: ERROR: Unknown directive type "todo".
.. todo::
Is there a way to determine site equivalence between sites in a slab
and bulk system? This would allow us get the coordination number of
a specific site for multi-elemental systems or systems with more
than one inequivalent site. This will allow us to use this for
compound systems. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:12: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory.from_ase:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory.from_ase:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory.to_ase:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory.to_ase:8: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units:8: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units.unitized:14: ERROR: Unexpected indentation. [docutils]
WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.name: <monty.functools.lazy_property object at 0xd1db3030> is not a callable object
WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.type: <monty.functools.lazy_property object at 0xd1e8e3c8> is not a callable object
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/libxcfunc.py:docstring of pymatgen.core.libxcfunc.LibxcFunc.all_kinds:1: ERROR: Unknown target name: "xc". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/core/xcfunc.py:docstring of pymatgen.core.xcfunc.XcFunc:29: ERROR: Unknown target name: "xc". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/bandstructure.py:docstring of pymatgen.electronic_structure.bandstructure.BandStructure.get_cbm:4: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/bandstructure.py:docstring of pymatgen.electronic_structure.bandstructure.BandStructure.get_vbm:4: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:10: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:13: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:20: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.get_extreme:24: ERROR: Unexpected indentation. [docutils]
WARNING: autodoc: failed to import module 'boltztrap2' from module 'pymatgen.electronic_structure'; the following exception was raised:
BoltzTraP2 has to be installed and working [autodoc.import_object]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.are_cobis:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.are_cobis, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.are_coops:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.are_coops, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.is_spin_polarized:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.is_spin_polarized, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:71: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:73: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:74: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.are_cobis:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.are_cobis, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.are_coops:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.are_coops, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.icohp:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.icohp, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.num_bonds:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.num_bonds, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.summed_icohp:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.summed_icohp, other instance in pymatgen.electronic_structure, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.get_integrated_cohp_in_energy_range:19: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:8: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:12: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:20: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:24: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_center:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_kurtosis:5: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_skewness:5: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_width:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_width:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_n_moment:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_n_moment:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos.get_site_orbital_dos:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos.get_site_orbital_dos:9: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/plotter.py:docstring of pymatgen.electronic_structure.plotter.BSPlotterProjected.get_projected_plots_dots:9: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/plotter.py:docstring of pymatgen.electronic_structure.plotter.DosPlotter:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/entries/correction_calculator.py:docstring of pymatgen.entries.correction_calculator.CorrectionCalculator.compute_corrections:8: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/entries/mixing_scheme.py:docstring of pymatgen.entries.mixing_scheme.MaterialsProjectDFTMixingScheme.get_mixing_state_data:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData:31: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:10: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:11: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianInput:16: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:57: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:63: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:64: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.get_scan_plot:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.get_scan_plot, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.get_spectre_plot:14: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.read_scan:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.read_scan, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.save_scan_plot:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.save_scan_plot, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.to_input:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.to_input, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/icet.py:docstring of pymatgen.io.icet.IcetSQS.enumerate_sqs_structures:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lmto.py:docstring of pymatgen.io.lmto.LMTOCopl:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/multiwfn.py:docstring of pymatgen.io.multiwfn.map_atoms_cps:16: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/multiwfn.py:docstring of pymatgen.io.multiwfn.match_atom_cp:18: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol:5: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:9: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:15: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/phonopy.py:docstring of pymatgen.io.phonopy.get_gruneisen_ph_bs_symm_line:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/phonopy.py:docstring of pymatgen.io.phonopy.get_ph_bs_symm_line:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/pwscf.py:docstring of pymatgen.io.pwscf.PWInput:42: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/shengbte.py:docstring of pymatgen.io.shengbte.Control:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/shengbte.py:docstring of pymatgen.io.shengbte.Control:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.data:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.data, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.ik:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.ik, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.is_noncollinear:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.is_noncollinear, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.nbnd:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.nbnd, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.ng:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.ng, other instance in pymatgen.io, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:10: WARNING: Title underline too short.
Zeo++ Installation Steps:
======================== [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:15: WARNING: Title underline too short.
Zeo++ Post-Installation Checking:
============================== [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:15: WARNING: Title underline too short.
Zeo++ Post-Installation Checking:
============================== [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:19: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cif.py:docstring of pymatgen.io.cif.CifBlock:9: ERROR: Unknown target name: "data". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/abiobjects.py:docstring of pymatgen.io.abinit.abiobjects.structure_from_abivars:14: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/abitimer.py:docstring of pymatgen.io.abinit.abitimer.AbinitTimerParser:10: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/abitimer.py:docstring of pymatgen.io.abinit.abitimer.AbinitTimerParser.walk:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ShiftMode:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.calc_shiftk:30: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.calc_shiftk:37: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
WARNING: Failed to get a method signature for pymatgen.io.abinit.netcdf.EtsfReader.chemical_symbols: <monty.functools.lazy_property object at 0xcf472d50> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_core_density: <monty.functools.lazy_property object at 0xcf655b70> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_partial_waves: <monty.functools.lazy_property object at 0xcf4010b0> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.projector_functions: <monty.functools.lazy_property object at 0xcf401430> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.pseudo_core_density: <monty.functools.lazy_property object at 0xcf5138b0> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.root: <monty.functools.lazy_property object at 0xcf655270> is not a callable object
WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.Pseudo.md5: <monty.functools.lazy_property object at 0xcf73e3c0> is not a callable object
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.gth_header:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:5: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:9: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.tm_header:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:8: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:20: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:21: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:23: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:30: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:31: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:38: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:40: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:47: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:48: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:3: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:6: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:6: ERROR: Undefined substitution referenced: "PseudoTable". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput.pseudos:1: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput.structure:1: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicMultiDataset:35: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:1: ERROR: Undefined substitution referenced: "BasicMultiDataset". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:3: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:4: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:4: ERROR: Undefined substitution referenced: "PseudoTable". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:3: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:4: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:4: ERROR: Undefined substitution referenced: "PseudoTable". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:1: ERROR: Undefined substitution referenced: "BasicMultiDataset". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:4: ERROR: Undefined substitution referenced: "Structure". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:5: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:5: ERROR: Undefined substitution referenced: "PseudoTable". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.num_valence_electrons:3: ERROR: Undefined substitution referenced: "Pseudo". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.edges:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.edges, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.elf_type:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.elf_type, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.filename:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.filename, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.format:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.format, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.kpoint:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.kpoint, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.origin:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.origin, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.points:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.points, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.spin_state:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.spin_state, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.type:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.type, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsSpeciesFile.data:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsSpeciesFile.data, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsSpeciesFile.label:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsSpeciesFile.label, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/parsers.py:docstring of pymatgen.io.aims.parsers.AimsOutChunk.lines:1: WARNING: duplicate object description of pymatgen.io.aims.parsers.AimsOutChunk.lines, other instance in pymatgen.io.aims, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.use_structure_charge:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.use_structure_charge, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.user_kpoints_settings:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.user_kpoints_settings, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.user_params:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.user_params, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.k_point_density:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.k_point_density, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.GWSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.GWSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.GWSetGenerator.k_point_density:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.GWSetGenerator.k_point_density, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.max_force:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.max_force, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.method:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.method, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.relax_cell:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.relax_cell, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.host:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.host, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.port:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.port, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.StaticSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.StaticSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/aims/sets/magnetism.py:docstring of pymatgen.io.aims.sets.magnetism.MagneticStaticSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.magnetism.MagneticStaticSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.alias_names:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.alias_names, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.element:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.element, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.filename:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.filename, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.info:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.info, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.name:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.name, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.potential:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.potential, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.version:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.version, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.admm:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.admm, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.cc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.cc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.contracted:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.contracted, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.core:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.core, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.diffuse:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.diffuse, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.electrons:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.electrons, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.lri:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.lri, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.molopt:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.molopt, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.pc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.pc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.polarization:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.polarization, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.sr:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.sr, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.valence:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.valence, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.xc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.xc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:19: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.coefficients:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.coefficients, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.exponents:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.exponents, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.info:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.info, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmax:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmax, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmin:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmin, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.n:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.n, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nset:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nset, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nshell:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nshell, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.c_exp_ppl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.c_exp_ppl, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.hprj_ppnl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.hprj_ppnl, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.n_elecs:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.n_elecs, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nexp_ppl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nexp_ppl, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nprj:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nprj, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nprj_ppnl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nprj_ppnl, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.r_loc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.r_loc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.radii:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.radii, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.KpointSet:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Kpoint_Set:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.electrons:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.electrons, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.nlcc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.nlcc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.potential_type:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.potential_type, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.xc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.xc, other instance in pymatgen.io.cp2k, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:14: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:15: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:19: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Section.update:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Section.update:17: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/outputs.py:docstring of pymatgen.io.cp2k.outputs.parse_pdos:22: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.CellOptSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet:25: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet.get_basis_and_potential:21: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet.print_v_hartree:3: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridCellOptSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridRelaxSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridStaticSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.RelaxSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.StaticSet:23: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:10: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:12: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:13: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/exciting/inputs.py:docstring of pymatgen.io.exciting.inputs.ExcitingInput.lockxyz:1: WARNING: duplicate object description of pymatgen.io.exciting.inputs.ExcitingInput.lockxyz, other instance in pymatgen.io.exciting, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/feff/inputs.py:docstring of pymatgen.io.feff.inputs.Header:6: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/feff/inputs.py:docstring of pymatgen.io.feff.inputs.Header.from_str:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/feff/sets.py:docstring of pymatgen.io.feff.sets.FEFFDictSet:26: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/inputs.py:docstring of pymatgen.io.jdftx.inputs.JDFTXStructure.selective_dynamics:1: WARNING: duplicate object description of pymatgen.io.jdftx.inputs.JDFTXStructure.selective_dynamics, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/inputs.py:docstring of pymatgen.io.jdftx.inputs.JDFTXStructure.sort_structure:1: WARNING: duplicate object description of pymatgen.io.jdftx.inputs.JDFTXStructure.sort_structure, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/inputs.py:docstring of pymatgen.io.jdftx.inputs.JDFTXStructure.structure:1: WARNING: duplicate object description of pymatgen.io.jdftx.inputs.JDFTXStructure.structure, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxinfile_master_format.py:docstring of pymatgen.io.jdftx.jdftxinfile_master_format:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxinfile_master_format.py:docstring of pymatgen.io.jdftx.jdftxinfile_master_format:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:373: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:374: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:383: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:383: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:385: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:387: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:388: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:394: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:394: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:396: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:398: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:405: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice:407: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.a:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.a, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords_final:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords_final, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords_initial:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_coords_initial, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_elements:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_elements, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_elements_int:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_elements_int, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_types:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.atom_types, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.b:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.b, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.broadening:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.broadening, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.broadening_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.broadening_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.c:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.c, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.efermi:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.efermi, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.egap:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.egap, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.emax:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.emax, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.emin:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.emin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.fftgrid:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.fftgrid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.fluid:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.fluid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.geom_opt:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.geom_opt, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.geom_opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.geom_opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_eigstats:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_eigstats, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_parsable_pseudo:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_parsable_pseudo, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_solvation:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.has_solvation, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.homo:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.homo, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.homo_filling:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.homo_filling, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_bgw:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_bgw, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_gc:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_gc, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_metal:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.is_metal, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_electronic:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_electronic, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_fluid:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_fluid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_ionic:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_ionic, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_lattice:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jsettings_lattice, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jstrucs:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.jstrucs, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.kgrid:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.kgrid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice_final:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice_final, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice_initial:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lattice_initial, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lumo:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lumo, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lumo_filling:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.lumo_filling, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nat:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nat, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nbands:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nbands, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nspin:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.nspin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.pp_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.pp_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.prefix:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.prefix, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.pwcut:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.pwcut, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.rhocut:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.rhocut, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.semicore_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.semicore_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.semicore_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.semicore_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.spintype:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.spintype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.total_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.total_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.total_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.total_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.truncation_radius:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.truncation_radius, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.truncation_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.truncation_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.valence_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.valence_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.valence_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.valence_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jdftxoutfileslice.py:docstring of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.xc_func:1: WARNING: duplicate object description of pymatgen.io.jdftx.jdftxoutfileslice.JDFTXOutfileSlice.xc_func, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.abs_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.abs_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.e:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.mu:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.mu, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.nelectrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.nelectrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.subspacerotationadjust:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.subspacerotationadjust, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.t_s:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.t_s, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElStep.tot_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElStep.tot_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.abs_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.abs_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.converged:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.converged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.converged_reason:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.converged_reason, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.e:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.iter_flag:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.iter_flag, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.mu:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.mu, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.nelectrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.nelectrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.slices:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.slices, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.subspacerotationadjust:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.subspacerotationadjust, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.t_s:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.t_s, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/jelstep.py:docstring of pymatgen.io.jdftx.jelstep.JElSteps.tot_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.jelstep.JElSteps.tot_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure:9: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.abs_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.abs_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.e:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.ecomponents:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.ecomponents, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_e:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elec_nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.elecmindata:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.elecmindata, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.emin_flag:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.emin_flag, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.eopt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.eopt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.geom_converged:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.geom_converged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.geom_converged_reason:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.geom_converged_reason, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.line_types:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.line_types, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.mu:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.mu, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.nelectrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.nelectrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.selective_dynamics:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.selective_dynamics, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.strain:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.strain, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.stress:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.stress, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.structure:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.structure, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.t_s:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.t_s, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructure.py:docstring of pymatgen.io.jdftx.joutstructure.JOutStructure.tot_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructure.JOutStructure.tot_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures:111: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures:162: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.abs_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.abs_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.charges:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.charges, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.e:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.ecomponents:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.ecomponents, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_converged:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_converged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_converged_reason:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_converged_reason, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_e:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elec_nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.elecmindata:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.elecmindata, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.emin_flag:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.emin_flag, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.eopt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.eopt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.geom_converged:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.geom_converged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.geom_converged_reason:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.geom_converged_reason, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.magnetic_moments:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.magnetic_moments, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.mu:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.mu, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.out_slice_start_flag:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.out_slice_start_flag, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.selective_dynamics:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.selective_dynamics, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.slices:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.slices, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.strain:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.strain, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.stress:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.stress, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.structure:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.structure, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/joutstructures.py:docstring of pymatgen.io.jdftx.joutstructures.JOutStructures.tot_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.joutstructures.JOutStructures.tot_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile:434: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile:485: WARNING: Inline substitution_reference start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile:508: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.a:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.a, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.abs_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.abs_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords_final:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords_final, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords_initial:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_coords_initial, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_elements:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_elements, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_elements_int:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_elements_int, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_types:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.atom_types, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.b:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.b, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.broadening:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.broadening, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.broadening_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.broadening_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.c:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.c, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.converged:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.converged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.e:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.efermi:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.efermi, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.egap:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.egap, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_alpha:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_alpha, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_e:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_e, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elec_nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.elecmindata:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.elecmindata, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.emax:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.emax, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.emin:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.emin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.eopt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.eopt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.etype:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.etype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.fftgrid:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.fftgrid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.fluid:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.fluid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.geom_opt:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.geom_opt, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.geom_opt_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.geom_opt_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.grad_k:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.grad_k, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.has_solvation:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.has_solvation, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.homo:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.homo, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.homo_filling:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.homo_filling, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.is_gc:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.is_gc, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.is_metal:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.is_metal, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_electronic:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_electronic, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_fluid:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_fluid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_ionic:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_ionic, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_lattice:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.jsettings_lattice, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.jstrucs:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.jstrucs, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.kgrid:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.kgrid, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice_final:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice_final, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice_initial:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.lattice_initial, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.linmin:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.linmin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.lumo:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.lumo, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.lumo_filling:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.lumo_filling, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.mu:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.mu, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.nat:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.nat, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.nbands:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.nbands, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.nspin:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.nspin, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.nstep:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.nstep, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.pp_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.pp_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.prefix:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.prefix, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.pwcut:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.pwcut, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.rhocut:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.rhocut, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.semicore_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.semicore_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.semicore_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.semicore_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.slices:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.slices, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.spintype:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.spintype, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.strain:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.strain, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.stress:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.stress, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.structure:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.structure, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.tot_magneticmoment:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.tot_magneticmoment, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.total_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.total_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.total_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.total_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.trajectory:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.trajectory, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.truncation_radius:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.truncation_radius, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.truncation_type:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.truncation_type, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.valence_electrons:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.valence_electrons, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.valence_electrons_uncharged:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.valence_electrons_uncharged, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutfile.xc_func:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutfile.xc_func, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.bandProjections:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.bandProjections, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.calc_dir:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.calc_dir, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.eigenvals:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.eigenvals, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.orb_label_list:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.orb_label_list, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.outfile:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.outfile, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.paths:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.paths, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/jdftx/outputs.py:docstring of pymatgen.io.jdftx.outputs.JDFTXOutputs.store_vars:1: WARNING: duplicate object description of pymatgen.io.jdftx.outputs.JDFTXOutputs.store_vars, other instance in pymatgen.io.jdftx, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.as_lammpsdata:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.as_lammpsdata:8: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.disassemble:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.disassemble:7: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.get_str:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.get_str:5: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.ForceField:42: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.ForceField:57: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.LammpsData.set_charge_atom_type:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.Topology:25: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.Topology:29: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.calc_type, other instance in pymatgen.io.lammps, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.keep_stages:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.keep_stages, other instance in pymatgen.io.lammps, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.settings:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.settings, other instance in pymatgen.io.lammps, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.template:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.template, other instance in pymatgen.io.lammps, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:9: WARNING: Inline literal start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:17: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:11: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:7: WARNING: Inline literal start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:12: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:17: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:14: WARNING: Inline literal start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:19: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:21: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:23: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:6: WARNING: Inline literal start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:11: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:19: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:21: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:22: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:23: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:28: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:25: WARNING: Inline literal start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:35: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData:6: ERROR: Unknown target name: "a-za-z0-9". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/lobsterenv.py:docstring of pymatgen.io.lobster.lobsterenv.LobsterNeighbors:24: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/lobsterenv.py:docstring of pymatgen.io.lobster.lobsterenv.LobsterNeighbors.get_info_cohps_to_neighbors:21: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:22: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:26: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:27: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:37: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:42: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.completedos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.completedos, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.energies:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.energies, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.is_spin_polarized:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.is_spin_polarized, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.itdensities:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.itdensities, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.pdos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.pdos, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.tdensities:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.tdensities, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.tdos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.tdos, other instance in pymatgen.io.lobster, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:10: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:12: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Icohplist:31: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.NciCobiList:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.NciCobiList:18: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/pwmat/outputs.py:docstring of pymatgen.io.pwmat.outputs.DosSpin.get_partial_dos:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:64: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:66: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:67: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:74: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:79: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:81: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:85: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:86: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:97: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:99: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:101: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:102: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:117: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:137: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput.pcm_nonels_template:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput.pcm_nonels_template:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.QCOutput.multiple_outputs_from_file:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.QCOutput.multiple_outputs_from_file:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:8: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:13: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:68: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:88: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:95: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:97: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:102: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:103: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:110: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:117: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:119: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:124: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:125: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:127: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:133: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:135: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:140: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:141: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:68: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:88: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:95: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:97: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:102: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:103: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:110: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:117: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:119: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:124: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:125: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:127: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:133: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:135: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:140: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:141: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:81: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:101: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:108: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:110: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:115: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:116: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:123: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:130: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:132: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:137: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:138: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:140: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:146: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:148: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:153: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:154: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:155: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.PESScanSet:88: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:87: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:107: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:108: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:119: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:126: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:128: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:133: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:134: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:141: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:148: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:150: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:155: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:156: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:158: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:164: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:166: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:171: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:172: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:173: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:183: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:186: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:188: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:190: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:191: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:76: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:90: WARNING: Enumerated list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:97: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:99: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:104: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:105: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:112: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:119: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:121: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:126: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:127: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:129: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:135: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:137: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:143: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:144: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:152: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:155: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:157: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:159: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:160: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.TransitionStateSet:77: WARNING: Inline emphasis start-string without end-string. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.lattice_velocities:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.lattice_velocities, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.predictor_corrector:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.predictor_corrector, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.predictor_corrector_preamble:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.predictor_corrector_preamble, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.selective_dynamics:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.selective_dynamics, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.velocities:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.velocities, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.get_electron_configuration:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.identify_potcar:17: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.identify_potcar_hash_based:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:7: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:11: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:12: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:21: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:27: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.VaspInput.write_input:18: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Dynmat:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Dynmat:8: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar:11: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:5: CRITICAL: Unexpected section title.
Fermi contact (isotropic) hyperfine coupling parameter (MHz)
------------------------------------------------------------- [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:7: CRITICAL: Unexpected section title.
ion A_pw A_1PS A_1AE A_1c A_tot
------------------------------------------------------------- [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:13: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_freq_dielectric:6: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:3: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:8: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:12: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.me_imag:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.me_imag, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.me_real:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.me_real, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nbands:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nbands, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nkpoints:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nkpoints, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nspin:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nspin, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder:21: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_imag:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_imag, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_real:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_real, other instance in pymatgen.io.vasp, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MP24RelaxSet:9: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MP24RelaxSet:12: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MP24RelaxSet:17: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MP24RelaxSet:21: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MP24RelaxSet:30: WARNING: Definition list ends without a blank line; unexpected unindent. [docutils]
WARNING: Failed to get a method signature for pymatgen.phonon.dos.PhononDos.ind_zero_freq: <monty.functools.lazy_property object at 0xcfb68180> is not a callable object
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:1: ERROR: Unknown interpreted text role "cite". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:5: ERROR: Unknown interpreted text role "cite". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/plotter.py:docstring of pymatgen.phonon.plotter.PhononDosPlotter:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.compute_directionality_quality_criterion:11: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.to_structure_with_site_properties_Ucif:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.to_structure_with_site_properties_Ucif:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/phonon/gruneisen.py:docstring of pymatgen.phonon.gruneisen.GruneisenParameter.average_gruneisen:1: ERROR: Unknown target name: "materialia". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer:7: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.PointGroupAnalyzer.symmetrize_molecule:16: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.PointGroupAnalyzer.symmetrize_molecule:17: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.SpacegroupAnalyzer.get_symmetry_dataset:10: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.SpacegroupAnalyzer.get_symmetry_dataset:15: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.iterative_symmetrize:22: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.iterative_symmetrize:23: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/groups.py:docstring of pymatgen.symmetry.groups.PointGroup.symmetry_ops:1: WARNING: duplicate object description of pymatgen.symmetry.groups.PointGroup.symmetry_ops, other instance in pymatgen.symmetry, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/kpath.py:docstring of pymatgen.symmetry.kpath.KPathLatimerMunro:15: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/kpath.py:docstring of pymatgen.symmetry.kpath.KPathLatimerMunro:16: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/maggroups.py:docstring of pymatgen.symmetry.maggroups.MagneticSpaceGroup:53: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/symmetry/maggroups.py:docstring of pymatgen.symmetry.maggroups.MagneticSpaceGroup:54: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.GrainBoundaryTransformation:34: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.GrainBoundaryTransformation:35: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.SQSTransformation:6: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.SQSTransformation:7: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_graph_hash:45: WARNING: Explicit markup ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:68: WARNING: Duplicate explicit target name: "1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:69: WARNING: Explicit markup ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/plotting.py:docstring of pymatgen.util.plotting.van_arkel_triangle:5: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/plotting.py:docstring of pymatgen.util.plotting.van_arkel_triangle:7: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.description:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.description, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.name:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.name, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.url:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.url, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/string.py:docstring of pymatgen.util.string.str_delimited:4: ERROR: Unexpected indentation. [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.util.rst:21: ERROR: Unknown target name: "int". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.util.rst:21: ERROR: Unknown target name: "float". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_graph_hash:7: ERROR: Duplicate target name, cannot be used as a unique reference: "1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:23: ERROR: Duplicate target name, cannot be used as a unique reference: "1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:23: ERROR: Unknown target name: "2". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". [docutils]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing:1: WARNING: duplicate object description of pymatgen.util.testing, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest.TEST_STRUCTURES:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest.TEST_STRUCTURES, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest.assert_msonable:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest.assert_msonable, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest.assert_str_content_equal:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest.assert_str_content_equal, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest.get_structure:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest.get_structure, other instance in pymatgen.util, use :no-index: for one of them
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/util/testing.py:docstring of pymatgen.util.testing.PymatgenTest.serialize_with_pickle:1: WARNING: duplicate object description of pymatgen.util.testing.PymatgenTest.serialize_with_pickle, other instance in pymatgen.util, use :no-index: for one of them
looking for now-outdated files... none found
pickling environment... done
checking consistency... /build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/modules.rst: WARNING: document isn't included in any toctree
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.util.testing.rst: WARNING: document isn't included in any toctree
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.alchemy.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.alchemy
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.analysis.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.analysis
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.apps.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.apps
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.cli.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.cli
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.command_line.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.command_line
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.core.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.core
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.electronic_structure.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.electronic_structure
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.entries.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.entries
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.ext.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.ext
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.io
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.optimization.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.optimization
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.phonon.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.phonon
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.symmetry.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.symmetry
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.transformations.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.transformations
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.util.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.util
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.vis.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.vis
done
preparing documents... WARNING: unsupported theme option 'display_version' given
done
copying assets...
copying static files...
Writing evaluated template result to /build/reproducible-path/pymatgen-2025.2.18+dfsg1/build/html/_static/basic.css
Writing evaluated template result to /build/reproducible-path/pymatgen-2025.2.18+dfsg1/build/html/_static/language_data.js
Writing evaluated template result to /build/reproducible-path/pymatgen-2025.2.18+dfsg1/build/html/_static/documentation_options.js
Writing evaluated template result to /build/reproducible-path/pymatgen-2025.2.18+dfsg1/build/html/_static/js/versions.js
copying static files: done
copying extra files...
copying extra files: done
copying assets: done
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writing output... [ 4%] modules
writing output... [ 6%] pymatgen
writing output... [ 8%] pymatgen.alchemy
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos:16: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_site_orbital_dos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.lobster.rst:29: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.KpointOptProps:1: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.KpointOptProps.kpoints:1: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Vasprun:129: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Vasprun.get_band_structure:1: WARNING: more than one target found for cross-reference 'BandStructure': pymatgen.electronic_structure.bandstructure.BandStructure, pymatgen.io.cp2k.inputs.BandStructure [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/cpython3_3.13_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.VaspInputSet.prev_kpoints:1: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints [ref.python]
generating indices... genindex py-modindex done
writing additional pages... search done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 941 warnings.
The HTML pages are in build/html.
make[1]: Leaving directory '/build/reproducible-path/pymatgen-2025.2.18+dfsg1'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/pymatgen-2025.2.18+dfsg1'
SKIP_TESTS=""; \
list_initialised=0; \
for t in test_matproj TestGenKpt TestHighSymmetryPoint test_from_multi_jobs_file test_from_string test_read_molecule test_read_nbo test_read_negative test_read_plots test_read_write_nbo7 test_all test_custom_smd_write test_sets test_CifWriter test_read_write test_init test_get_site_symmetries BSDOSPlotterTest test_cdft_dc_parsing test_get_structure_by_id test_babel_PC_with_RO_depth_0_vs_depth_10 test_fit; do \
if [ ${list_initialised} = 0 ]; then \
SKIP_TESTS=$t; \
list_initialised=1; \
else \
SKIP_TESTS="${SKIP_TESTS} or $t"; \
fi; \
done; \
if [ "x${SKIP_TESTS}" != "x" ]; then \
SKIP_TESTS="not ( ${SKIP_TESTS} )"; \
fi; \
echo "skipping tests: ${SKIP_TESTS}"; \
for py in `py3versions -sv`; do \
pybuilddir=`pybuild --pyver $py --print build_dir | awk '{print $3}'`; \
testdir=/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python$py; \
cp -a $pybuilddir $testdir; \
cp -a tests $testdir; \
PMG_TEST_FILES_DIR=/usr/share/doc/pymatgen-test-files/examples/files \
PYTHONPATH=$testdir PATH=$pybuilddir/../scripts:$PATH \
python$py -m pytest -v --import-mode=prepend --color=no -k "${SKIP_TESTS}" $testdir; \
done
skipping tests: not ( test_matproj or TestGenKpt or TestHighSymmetryPoint or test_from_multi_jobs_file or test_from_string or test_read_molecule or test_read_nbo or test_read_negative or test_read_plots or test_read_write_nbo7 or test_all or test_custom_smd_write or test_sets or test_CifWriter or test_read_write or test_init or test_get_site_symmetries or BSDOSPlotterTest or test_cdft_dc_parsing or test_get_structure_by_id or test_babel_PC_with_RO_depth_0_vs_depth_10 or test_fit )
============================= test session starts ==============================
platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0
rootdir: /build/reproducible-path/pymatgen-2025.2.18+dfsg1
configfile: pyproject.toml
plugins: typeguard-4.4.2
collected 3114 items / 291 deselected / 8 skipped / 2823 selected
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.pybuild/test_python3.13/tests/analysis/ferroelectricity/test_polarization.py . [ 4%]
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.pybuild/test_python3.13/tests/analysis/magnetism/test_heisenberg.py ... [ 5%]
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=================================== FAILURES ===================================
______________________ TestPackmolSet.test_chdir_behavior ______________________
self = <test_packmol.TestPackmolSet testMethod=test_chdir_behavior>
def test_chdir_behavior(self):
"""
Make sure the code returns to the starting directory whether
or not packmol exits cleanly.
"""
start_dir = str(Path.cwd())
# this one will not exit cleanly b/c the box is too small
pw = PackmolBoxGen().get_input_set(
molecules=[
{"name": "water", "number": 1000, "coords": water},
{"name": "ethanol", "number": 2000, "coords": ethanol},
],
box=[0, 0, 0, 2, 2, 2],
)
pw.write_input(self.tmp_path)
with pytest.raises(ValueError, match=ERR_MSG_173):
pw.run(self.tmp_path)
assert str(Path.cwd()) == start_dir
# this one will exit cleanly
pw = PackmolBoxGen().get_input_set(
molecules=[
{"name": "water", "number": 1000, "coords": water},
{"name": "ethanol", "number": 2000, "coords": ethanol},
],
)
pw.write_input(self.tmp_path)
> pw.run(self.tmp_path)
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/test_packmol.py:191:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/io/packmol.py:62: in run
proc = subprocess.run(
/usr/lib/python3.13/subprocess.py:556: in run
stdout, stderr = process.communicate(input, timeout=timeout)
/usr/lib/python3.13/subprocess.py:1219: in communicate
stdout, stderr = self._communicate(input, endtime, timeout)
/usr/lib/python3.13/subprocess.py:2123: in _communicate
self._check_timeout(endtime, orig_timeout, stdout, stderr)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Popen: returncode: -9 args: ['packmol']>, endtime = 175092.792357046
orig_timeout = 30
stdout_seq = [b'\n################################################################################\n\n PACKMOL - Packing optimizati... 2 :H6 C2 O1( 9 atoms)\n Maximum number of GENCAN loops for all molecule packing: 400\n', ...]
stderr_seq = [], skip_check_and_raise = False
def _check_timeout(self, endtime, orig_timeout, stdout_seq, stderr_seq,
skip_check_and_raise=False):
"""Convenience for checking if a timeout has expired."""
if endtime is None:
return
if skip_check_and_raise or _time() > endtime:
> raise TimeoutExpired(
self.args, orig_timeout,
output=b''.join(stdout_seq) if stdout_seq else None,
stderr=b''.join(stderr_seq) if stderr_seq else None)
E subprocess.TimeoutExpired: Command '['packmol']' timed out after 30 seconds
/usr/lib/python3.13/subprocess.py:1263: TimeoutExpired
----------------------------- Captured stdout call -----------------------------
Auto determined box size is 79.8 Å per side.
=============================== warnings summary ===============================
.pybuild/test_python3.13/tests/analysis/chemenv/utils/test_func_utils.py::TestFuncUtils::test_csm_infinite_ratio_function
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/chemenv/utils/math_utils.py:333: RuntimeWarning: divide by zero encountered in scalar divide
return np.where(np.isclose(xx, 0.0), aa * float("inf"), aa * np.power(xx - 1.0, 2) / xx)
.pybuild/test_python3.13/tests/analysis/chemenv/utils/test_func_utils.py::TestFuncUtils::test_csm_infinite_ratio_function
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/chemenv/utils/math_utils.py:351: RuntimeWarning: divide by zero encountered in scalar divide
aa * np.power(xx - 1.0, 2) / xx**2.0,
.pybuild/test_python3.13/tests/analysis/elasticity/test_elastic.py: 96974 warnings
.pybuild/test_python3.13/tests/analysis/elasticity/test_strain.py: 4 warnings
.pybuild/test_python3.13/tests/analysis/elasticity/test_stress.py: 8 warnings
.pybuild/test_python3.13/tests/analysis/interfaces/test_substrate_analyzer.py: 16 warnings
.pybuild/test_python3.13/tests/analysis/test_piezo.py: 8 warnings
.pybuild/test_python3.13/tests/core/test_tensors.py: 468 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/core/tensors.py:364: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/elasticity/test_elastic.py: 48487 warnings
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/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/core/tensors.py:992: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_graphs.py: 17 warnings
.pybuild/test_python3.13/tests/command_line/test_critic2_caller.py: 5 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/command_line/critic2_caller.py:490: DeprecationWarning:
Parsing critic2 standard output is deprecated and will not be maintained, please use the native JSON output in the future.
.pybuild/test_python3.13/tests/analysis/test_interface_reactions.py: 24 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/analysis/test_interface_reactions.py:368: DeprecationWarning:
Arrays of 2-dimensional vectors are deprecated. Use arrays of 3-dimensional vectors instead. (deprecated in NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/nmr.py:91: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/nmr.py:104: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/nmr.py:112: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_principal_axis_system
.pybuild/test_python3.13/tests/analysis/test_nmr.py::TestElectricFieldGradient::test_principal_axis_system
/usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:850: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 120 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:385: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 590 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:387: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 120 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:388: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 60 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:396: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 1040 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:393: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 12390 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:568: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 2520 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:571: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 1260 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:581: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 21840 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:578: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 826 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:437: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 168 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:439: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 84 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:449: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 1456 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:446: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 88 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:126: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 88 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:145: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 84 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:243: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_piezo_sensitivity.py: 98 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/piezo_sensitivity.py:244: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel
.pybuild/test_python3.13/tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel
.pybuild/test_python3.13/tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel
.pybuild/test_python3.13/tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel
/usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning:
This process (pid=16390) is multi-threaded, use of fork() may lead to deadlocks in the child.
.pybuild/test_python3.13/tests/analysis/test_quasirrho.py::TestQuasiRRHO::test_extreme_temperature_and_pressure
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/quasirrho.py:243: RuntimeWarning:
overflow encountered in exp
.pybuild/test_python3.13/tests/analysis/test_quasirrho.py::TestQuasiRRHO::test_extreme_temperature_and_pressure
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/analysis/quasirrho.py:244: RuntimeWarning:
overflow encountered in exp
.pybuild/test_python3.13/tests/core/test_structure.py::TestStructure::test_rotate_sites
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/core/structure.py:4699: RuntimeWarning:
invalid value encountered in divide
.pybuild/test_python3.13/tests/core/test_tensors.py: 18 warnings
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/core/test_tensors.py:207: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_convert_to_ieee
/usr/lib/python3/dist-packages/numpy/_core/_methods.py:44: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_round
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/core/test_tensors.py:376: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensor::test_round
/usr/lib/python3/dist-packages/numpy/_core/fromnumeric.py:48: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestTensorCollection::test_list_based_functions
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/core/test_tensors.py:409: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestSquareTensor::test_get_scaled
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/core/tensors.py:1003: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestSquareTensor::test_properties
.pybuild/test_python3.13/tests/core/test_tensors.py::TestSquareTensor::test_properties
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/core/test_tensors.py:524: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/core/test_tensors.py::TestSquareTensor::test_refine_rotation
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/core/test_tensors.py:556: DeprecationWarning:
__array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0)
.pybuild/test_python3.13/tests/electronic_structure/test_bandstructure.py::TestLobsterBandStructureSymmLine::test_proj_bandstructure_plot
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/electronic_structure/plotter.py:1119: RuntimeWarning:
More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
.pybuild/test_python3.13/tests/electronic_structure/test_dos.py::TestFermiDos::test_doping_fermi
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/electronic_structure/dos.py:527: RuntimeWarning:
divide by zero encountered in divide
.pybuild/test_python3.13/tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries
.pybuild/test_python3.13/tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries
.pybuild/test_python3.13/tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries
/usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning:
This process (pid=16390) is multi-threaded, use of fork() may lead to deadlocks in the child.
.pybuild/test_python3.13/tests/io/lammps/test_data.py::TestLammpsData::test_get_str
.pybuild/test_python3.13/tests/io/lammps/test_data.py::TestLammpsData::test_write_file
.pybuild/test_python3.13/tests/io/lammps/test_data.py::TestLammpsData::test_write_file
.pybuild/test_python3.13/tests/io/lammps/test_data.py::TestCombinedData::test_as_lammpsdata
.pybuild/test_python3.13/tests/io/lammps/test_data.py::TestCombinedData::test_get_str
/usr/lib/python3/dist-packages/numpy/_core/fromnumeric.py:57: FutureWarning:
'DataFrame.swapaxes' is deprecated and will be removed in a future version. Please use 'DataFrame.transpose' instead.
.pybuild/test_python3.13/tests/io/test_cif.py::TestCifIO::test_cif_writer_write_file
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/io/cif.py:1767: FutureWarning:
We strongly discourage using implicit binary/text `mode`, and this would not be allowed after 2025-06-01. I.e. you should pass t/b in `mode`.
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_dfpt_ionic
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:366: UnconvergedVASPWarning:
/usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.ionic.xml.gz is an unconverged VASP run.
Electronic convergence reached: True.
Ionic convergence reached: False.
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_dfpt_unconverged
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:373: UnconvergedVASPWarning:
/usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.unconverged.xml.gz is an unconverged VASP run.
Electronic convergence reached: False.
Ionic convergence reached: True.
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_runtype
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:159: UnconvergedVASPWarning:
/usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.hse06.xml.gz is an unconverged VASP run.
Electronic convergence reached: False.
Ionic convergence reached: True.
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_runtype
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:165: UnconvergedVASPWarning:
/usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.ionic.xml.gz is an unconverged VASP run.
Electronic convergence reached: True.
Ionic convergence reached: False.
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_standard
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:238: RuntimeWarning:
invalid value encountered in divide
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_standard
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:243: RuntimeWarning:
invalid value encountered in divide
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_standard
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:248: RuntimeWarning:
invalid value encountered in divide
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestVasprun::test_standard
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/tests/io/vasp/test_outputs.py:256: RuntimeWarning:
invalid value encountered in divide
.pybuild/test_python3.13/tests/io/vasp/test_outputs.py::TestWavecar::test_standard
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/io/vasp/outputs.py:5008: RuntimeWarning:
invalid value encountered in cast
.pybuild/test_python3.13/tests/phonon/test_plotter.py::TestPhononBSPlotter::test_proj_plot
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/phonon/plotter.py:514: RuntimeWarning:
More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
.pybuild/test_python3.13/tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap
.pybuild/test_python3.13/tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap
.pybuild/test_python3.13/tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap
.pybuild/test_python3.13/tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap
/build/reproducible-path/pymatgen-2025.2.18+dfsg1/.pybuild/test_python3.13/pymatgen/util/plotting.py:350: MatplotlibDeprecationWarning:
Getting the array from a PolyQuadMesh will return the full array in the future (uncompressed). To get this behavior now set the PolyQuadMesh with a 2D array .set_array(data2d).
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
============================= slowest 30 durations =============================
348.19s call .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py::TestCubicSupercellTransformation::test_apply_transformation_orthorhombic_supercell
180.70s call .pybuild/test_python3.13/tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation
137.02s call .pybuild/test_python3.13/tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10
134.98s call .pybuild/test_python3.13/tests/electronic_structure/test_plotter.py::TestBSPlotterProjected::test_methods
103.30s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_plot
102.08s call .pybuild/test_python3.13/tests/core/test_surface.py::TestSlab::test_symmetrization
97.38s call .pybuild/test_python3.13/tests/io/vasp/test_optics.py::TestVasprun::test_optics
87.15s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack
86.90s call .pybuild/test_python3.13/tests/core/test_surface.py::TestSlabGenerator::test_non_stoichiometric_symmetrized_slab
80.86s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos
80.13s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp
79.77s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos
79.16s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen
73.85s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy
73.78s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi
73.67s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict
72.89s call .pybuild/test_python3.13/tests/symmetry/test_kpath_sc.py::TestBandStructureSC::test_kpath_generation
71.37s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies
70.54s call .pybuild/test_python3.13/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen
66.50s call .pybuild/test_python3.13/tests/symmetry/test_groups.py::TestSpaceGroup::test_order_symm_ops
65.33s call .pybuild/test_python3.13/tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter
64.04s call .pybuild/test_python3.13/tests/analysis/topological/test_spillage.py::TestSolar::test_spillage_from_vasprun
61.68s call .pybuild/test_python3.13/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress
58.77s call .pybuild/test_python3.13/tests/entries/test_entry_tools.py::TestEntrySet::test_ground_states
57.48s call .pybuild/test_python3.13/tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number
54.14s call .pybuild/test_python3.13/tests/io/test_packmol.py::TestPackmolSet::test_chdir_behavior
53.09s call .pybuild/test_python3.13/tests/core/test_surface.py::TestSlab::test_get_symmetric_sites
50.92s call .pybuild/test_python3.13/tests/core/test_trajectory.py::TestTrajectory::test_xdatcar_write
48.55s call .pybuild/test_python3.13/tests/core/test_surface.py::TestMillerIndexFinder::test_generate_all_slabs
48.38s call .pybuild/test_python3.13/tests/symmetry/test_groups.py::TestSpaceGroup::test_valid_symbol
=========================== short test summary info ============================
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap2.py:27: No boltztrap2
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_cod.py:25: www.crystallography.net is down
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_matproj.py:44: MP API is down
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_openff.py:25: could not import 'openff.toolkit': No module named 'openff'
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_shengbte.py:10: could not import 'f90nml': No module named 'f90nml'
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_zeopp.py:20: zeo not installed
SKIPPED [1] .pybuild/test_python3.13/tests/performance/test_import_time.py:32: ref time only comparable in CI runner
SKIPPED [1] .pybuild/test_python3.13/tests/symmetry/test_kpath_hin.py:11: seekpath not installed
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/chemenv/coordination_environments/test_coordination_geometry_finder.py:174: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/chemenv/coordination_environments/test_coordination_geometry_finder.py:169: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/magnetism/test_analyzer.py:264: enumlib not present
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/magnetism/test_analyzer.py:300: enumlib not present
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_graphs.py:351: graphviz executables not present
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_graphs.py:243: Need someone to fix this, see issue 4206
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_local_env.py:1367: critic2 executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_molecule_structure_comparator.py:144: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_reaction_calculator.py:334: hash test requires 64 bits
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_surface_analysis.py:263: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_surface_analysis.py:270: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_surface_analysis.py:278: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_surface_analysis.py:256: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/analysis/test_surface_analysis.py:286: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_bader_caller.py:119: bader executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_bader_caller.py:84: bader executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_bader_caller.py:66: bader executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_bader_caller.py:136: bader executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_critic2_caller.py:26: critic2 executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_critic2_caller.py:62: critic2 executable not present
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SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_enumlib_caller.py:81: enum_lib not present.
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SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:356: gulp not present.
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:345: gulp not present.
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:352: gulp not present.
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:363: gulp not present.
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SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:373: gulp not present.
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_gulp_caller.py:379: gulp not present.
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SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_mcsqs_caller.py:67: mcsqs executable not present
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SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_mcsqs_caller.py:51: mcsqs executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_mcsqs_caller.py:59: mcsqs executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_mcsqs_caller.py:77: mcsqs executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_mcsqs_caller.py:89: mcsqs executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/command_line/test_vampire_caller.py:34: vampire executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:714: Only run this in CI tests
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:107: enumlib or mcsqs executable not present
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:988: could not import 'moyopy': No module named 'moyopy'
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:1931: chgnet is not built against NumPy 2.0
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2003: TODO: #3958 wait for matgl resolve of torch dependency
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:1021: PMG_MAPI_KEY environment variable not set or MP API is down. This is also the case in a PR.
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:1906: chgnet is not built against NumPy 2.0
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2015: TODO: #3958 wait for matgl resolve of torch dependency
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2026: TODO: #3958 wait for matgl resolve of torch dependency
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2035: TODO: #3958 wait for matgl resolve of torch dependency
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2668: could not import 'tblite': No module named 'tblite'
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_structure.py:2676: Pytorch and TBLite clash. https://github.com/materialsproject/pymatgen/pull/3060
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_surface.py:700: This test relies on neighbor orders and is hard coded. Disable temporarily
SKIPPED [1] .pybuild/test_python3.13/tests/core/test_xcfunc.py:56: TODO:
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:254: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:221: No x_trans.
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SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:199: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:232: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:101: No FDINT
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:123: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:203: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:132: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:116: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:86: No FDINT
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:207: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:141: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:157: No x_trans.
SKIPPED [1] .pybuild/test_python3.13/tests/electronic_structure/test_boltztrap.py:43: No x_trans.
SKIPPED [19] .pybuild/test_python3.13/tests/electronic_structure/test_plotter.py: No x_trans executable found
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_optimade.py:58: MP OPTIMADE is down.
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_optimade.py:81: At least one MC OPTIMADE API is down.
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_optimade.py:40: MP OPTIMADE is down.
SKIPPED [1] .pybuild/test_python3.13/tests/ext/test_optimade.py:93: OPTIMADE providers list is down.
SKIPPED [1] .pybuild/test_python3.13/tests/io/exciting/test_inputs.py:137: inconsistent data
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_cif.py:322: non-free PF*.cif test files are not available
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_jarvis.py:12: JARVIS-tools not loaded.
SKIPPED [1] .pybuild/test_python3.13/tests/io/test_jarvis.py:20: JARVIS-tools not loaded.
SKIPPED [1] .pybuild/test_python3.13/tests/io/vasp/test_help.py:22: www.vasp.at is down
SKIPPED [1] .pybuild/test_python3.13/tests/io/vasp/test_help.py:31: www.vasp.at is down
SKIPPED [1] .pybuild/test_python3.13/tests/io/vasp/test_help.py:37: www.vasp.at is down
SKIPPED [1] .pybuild/test_python3.13/tests/io/vasp/test_inputs.py:1717: TODO: need someone to fix this
SKIPPED [1] .pybuild/test_python3.13/tests/symmetry/test_kpaths.py:21: No seek path present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:97: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:158: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:188: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:207: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:237: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:249: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:364: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:304: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:342: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:334: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:352: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:492: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:540: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:549: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:607: mcsqs not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:617: mcsqs not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:638: mcsqs not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:670: icet not installed.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:656: icet not installed.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:681: icet not installed.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_advanced_transformations.py:874: hiphive not present
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_site_transformations.py:214: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_standard_transformations.py:238: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_standard_transformations.py:255: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_standard_transformations.py:273: enum_lib not present.
SKIPPED [1] .pybuild/test_python3.13/tests/transformations/test_standard_transformations.py:279: enum_lib not present.
= 1 failed, 2676 passed, 154 skipped, 291 deselected, 296901 warnings in 6103.71s (1:41:43) =
..tot conformations = 3
..tot confs tested = 3
..below energy threshold = 3
make[1]: *** [debian/rules:115: override_dh_auto_test] Error 1
make[1]: Leaving directory '/build/reproducible-path/pymatgen-2025.2.18+dfsg1'
make: *** [debian/rules:100: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
I: copying local configuration
E: Failed autobuilding of package
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/6824 and its subdirectories
Wed Mar 19 10:03:08 UTC 2025 W: No second build log, what happened?