Tue Feb 25 22:53:20 UTC 2025 I: starting to build glam2/unstable/i386 on jenkins on '2025-02-25 22:53'
Tue Feb 25 22:53:20 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_9/45248/console.log
Tue Feb 25 22:53:20 UTC 2025 I: Downloading source for unstable/glam2=1064-10
--2025-02-25 22:53:20-- http://deb.debian.org/debian/pool/main/g/glam2/glam2_1064-10.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2035 (2.0K) [text/prs.lines.tag]
Saving to: ‘glam2_1064-10.dsc’
0K . 100% 347M=0s
2025-02-25 22:53:20 (347 MB/s) - ‘glam2_1064-10.dsc’ saved [2035/2035]
Tue Feb 25 22:53:20 UTC 2025 I: glam2_1064-10.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: glam2
Binary: glam2
Architecture: any
Version: 1064-10
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>, Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>
Homepage: https://meme-suite.org/meme/doc/glam2.html?man_type=web
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/glam2
Vcs-Git: https://salsa.debian.org/med-team/glam2.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), libfftw3-dev
Package-List:
glam2 deb science optional arch=any
Checksums-Sha1:
655dec5140c3293953c7160b41cdbd073c00e2ca 237926 glam2_1064.orig.tar.gz
c50011f8ae76c237332905b1e086c34ca1502140 12624 glam2_1064-10.debian.tar.xz
Checksums-Sha256:
7cdcb290792e79d984d1244940cd2f4d9f92182e4611e6c441d3c273d1f30c40 237926 glam2_1064.orig.tar.gz
5eb5edb9eaf6f6b403ab7aab3ae9241334e8ba7bb0584edf6137e653f792e343 12624 glam2_1064-10.debian.tar.xz
Files:
84ec46d59e299c4cd70cd0b900696c30 237926 glam2_1064.orig.tar.gz
4b094e946edc2c30b744e1cefbcb5d0b 12624 glam2_1064-10.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=I6/Y
-----END PGP SIGNATURE-----
Tue Feb 25 22:53:20 UTC 2025 I: Checking whether the package is not for us
Tue Feb 25 22:53:20 UTC 2025 I: Starting 1st build on remote node ionos2-i386.debian.net.
Tue Feb 25 22:53:20 UTC 2025 I: Preparing to do remote build '1' on ionos2-i386.debian.net.
Tue Feb 25 22:54:42 UTC 2025 I: Deleting $TMPDIR on ionos2-i386.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Tue Feb 25 10:53:25 -12 2025
I: pbuilder-time-stamp: 1740524005
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [glam2_1064-10.dsc]
I: copying [./glam2_1064.orig.tar.gz]
I: copying [./glam2_1064-10.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./glam2_1064-10.dsc: unsupported subcommand
dpkg-source: info: extracting glam2 in glam2-1064
dpkg-source: info: unpacking glam2_1064.orig.tar.gz
dpkg-source: info: unpacking glam2_1064-10.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying change-fixed-compilers.patch
dpkg-source: info: applying fix_html_syntax.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/812/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
INVOCATION_ID='ac765a4617f8454ba1c7f3ea403b6ee0'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='812'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/pbuilderrc_3WBf --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/b1 --logfile b1/build.log glam2_1064-10.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://46.16.76.132:3128'
I: uname -a
Linux ionos2-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/812/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), libfftw3-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19761 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on libfftw3-dev; however:
Package libfftw3-dev is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget
0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded.
Need to get 27.6 MB of archives. After unpacking 112 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB]
Get: 2 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB]
Get: 3 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB]
Get: 4 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB]
Get: 5 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB]
Get: 6 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB]
Get: 7 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB]
Get: 8 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB]
Get: 9 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB]
Get: 10 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB]
Get: 11 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-5 [301 kB]
Get: 12 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB]
Get: 13 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 14 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-3 [862 kB]
Get: 15 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB]
Get: 16 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 17 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-3 [539 kB]
Get: 18 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 19 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 20 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 21 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 22 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB]
Get: 23 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB]
Get: 24 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB]
Get: 25 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-6 [9582 kB]
Get: 26 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB]
Get: 27 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB]
Get: 28 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 29 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 30 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB]
Get: 31 http://deb.debian.org/debian unstable/main i386 libfftw3-double3 i386 3.3.10-2+b1 [629 kB]
Get: 32 http://deb.debian.org/debian unstable/main i386 libfftw3-long3 i386 3.3.10-2+b1 [349 kB]
Get: 33 http://deb.debian.org/debian unstable/main i386 libfftw3-quad3 i386 3.3.10-2+b1 [1860 kB]
Get: 34 http://deb.debian.org/debian unstable/main i386 libfftw3-single3 i386 3.3.10-2+b1 [646 kB]
Get: 35 http://deb.debian.org/debian unstable/main i386 libfftw3-bin i386 3.3.10-2+b1 [50.0 kB]
Get: 36 http://deb.debian.org/debian unstable/main i386 libfftw3-dev i386 3.3.10-2+b1 [3254 kB]
Fetched 27.6 MB in 0s (58.9 MB/s)
Preconfiguring packages ...
Selecting previously unselected package sensible-utils.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19761 files and directories currently installed.)
Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ...
Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ...
Unpacking libmagic-mgc (1:5.45-3+b1) ...
Selecting previously unselected package libmagic1t64:i386.
Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ...
Unpacking libmagic1t64:i386 (1:5.45-3+b1) ...
Selecting previously unselected package file.
Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ...
Unpacking file (1:5.45-3+b1) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../04-gettext-base_0.23.1-1_i386.deb ...
Unpacking gettext-base (0.23.1-1) ...
Selecting previously unselected package libuchardet0:i386.
Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ...
Unpacking libuchardet0:i386 (0.0.8-1+b2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../06-groff-base_1.23.0-7_i386.deb ...
Unpacking groff-base (1.23.0-7) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../07-bsdextrautils_2.40.4-5_i386.deb ...
Unpacking bsdextrautils (2.40.4-5) ...
Selecting previously unselected package libpipeline1:i386.
Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ...
Unpacking libpipeline1:i386 (1.5.8-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ...
Unpacking man-db (2.13.0-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../10-m4_1.4.19-5_i386.deb ...
Unpacking m4 (1.4.19-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../11-autoconf_2.72-3_all.deb ...
Unpacking autoconf (2.72-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ...
Unpacking automake (1:1.17-3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ...
Unpacking autopoint (0.23.1-1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ...
Unpacking libdebhelper-perl (13.24.1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../16-libtool_2.5.4-3_all.deb ...
Unpacking libtool (2.5.4-3) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../17-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.14.1-2) ...
Selecting previously unselected package libelf1t64:i386.
Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ...
Unpacking libelf1t64:i386 (0.192-4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ...
Unpacking dwz (0.15-1+b1) ...
Selecting previously unselected package libunistring5:i386.
Preparing to unpack .../23-libunistring5_1.3-1_i386.deb ...
Unpacking libunistring5:i386 (1.3-1) ...
Selecting previously unselected package libicu72:i386.
Preparing to unpack .../24-libicu72_72.1-6_i386.deb ...
Unpacking libicu72:i386 (72.1-6) ...
Selecting previously unselected package libxml2:i386.
Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ...
Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../26-gettext_0.23.1-1_i386.deb ...
Unpacking gettext (0.23.1-1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../29-debhelper_13.24.1_all.deb ...
Unpacking debhelper (13.24.1) ...
Selecting previously unselected package libfftw3-double3:i386.
Preparing to unpack .../30-libfftw3-double3_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-double3:i386 (3.3.10-2+b1) ...
Selecting previously unselected package libfftw3-long3:i386.
Preparing to unpack .../31-libfftw3-long3_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-long3:i386 (3.3.10-2+b1) ...
Selecting previously unselected package libfftw3-quad3:i386.
Preparing to unpack .../32-libfftw3-quad3_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-quad3:i386 (3.3.10-2+b1) ...
Selecting previously unselected package libfftw3-single3:i386.
Preparing to unpack .../33-libfftw3-single3_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-single3:i386 (3.3.10-2+b1) ...
Selecting previously unselected package libfftw3-bin.
Preparing to unpack .../34-libfftw3-bin_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-bin (3.3.10-2+b1) ...
Selecting previously unselected package libfftw3-dev:i386.
Preparing to unpack .../35-libfftw3-dev_3.3.10-2+b1_i386.deb ...
Unpacking libfftw3-dev:i386 (3.3.10-2+b1) ...
Setting up libpipeline1:i386 (1.5.8-1) ...
Setting up libfftw3-single3:i386 (3.3.10-2+b1) ...
Setting up libicu72:i386 (72.1-6) ...
Setting up bsdextrautils (2.40.4-5) ...
Setting up libmagic-mgc (1:5.45-3+b1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.24.1) ...
Setting up libmagic1t64:i386 (1:5.45-3+b1) ...
Setting up libfftw3-long3:i386 (3.3.10-2+b1) ...
Setting up gettext-base (0.23.1-1) ...
Setting up m4 (1.4.19-5) ...
Setting up file (1:5.45-3+b1) ...
Setting up libelf1t64:i386 (0.192-4) ...
Setting up autotools-dev (20220109.1) ...
Setting up libfftw3-quad3:i386 (3.3.10-2+b1) ...
Setting up libunistring5:i386 (1.3-1) ...
Setting up autopoint (0.23.1-1) ...
Setting up libfftw3-double3:i386 (3.3.10-2+b1) ...
Setting up autoconf (2.72-3) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up libuchardet0:i386 (0.0.8-1+b2) ...
Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up automake (1:1.17-3) ...
update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.14.1-2) ...
Setting up gettext (0.23.1-1) ...
Setting up libtool (2.5.4-3) ...
Setting up libfftw3-bin (3.3.10-2+b1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up dh-strip-nondeterminism (1.14.1-2) ...
Setting up groff-base (1.23.0-7) ...
Setting up libfftw3-dev:i386 (3.3.10-2+b1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up debhelper (13.24.1) ...
Processing triggers for libc-bin (2.40-7) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/glam2-1064/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../glam2_1064-10_source.changes
dpkg-buildpackage: info: source package glam2
dpkg-buildpackage: info: source version 1064-10
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
debian/rules clean
dh clean --sourcedirectory=src
dh_auto_clean -O--sourcedirectory=src
dh_autoreconf_clean -O--sourcedirectory=src
debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/glam2-1064'
dh_clean
rm -f purge/*.o purge/purge src/*.o src/glam2 src/glam2mask scr/glam2format src/glam2scan src/glam2fft src/glam2format
make[1]: Leaving directory '/build/reproducible-path/glam2-1064'
debian/rules binary
dh binary --sourcedirectory=src
dh_update_autotools_config -O--sourcedirectory=src
dh_autoreconf -O--sourcedirectory=src
dh_auto_configure -O--sourcedirectory=src
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/reproducible-path/glam2-1064'
dh_auto_build
cd src && make -j11 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/glam2-1064/src'
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2 alphabet.c args.c column_sample.c dirichlet.c dna_prior.c fasta.c glam2.c glam2_aln.c init.c output.c recode3_20comp.c site_sample.c util.c -lm -Wl,-z,relro -Wl,-z,now
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2scan alphabet.c scan_args.c dirichlet.c dna_prior.c fasta.c scan.c scan_init.c scan_output.c recode3_20comp.c util.c heap.c motif.c alignment.c -lm -Wl,-z,relro -Wl,-z,now
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2format glam2format.c alignment.c fasta.c util.c -lm -Wl,-z,relro -Wl,-z,now
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2mask glam2mask.c alignment.c fasta.c util.c -lm -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/build/reproducible-path/glam2-1064/src'
dh_auto_build -B src -- glam2fft
cd src && make -j11 "INSTALL=install --strip-program=true" glam2fft
make[2]: Entering directory '/build/reproducible-path/glam2-1064/src'
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -DFFT -o glam2fft alphabet.c args.c column_sample.c dirichlet.c dna_prior.c fasta.c glam2.c glam2_aln.c init.c output.c recode3_20comp.c site_sample.c util.c convolve.c -lm -lfftw3 -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/build/reproducible-path/glam2-1064/src'
dh_auto_build -B purge
cd purge && make -j11 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/glam2-1064/purge'
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/glam2-1064=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o purge *.c -lm -Wl,-z,relro -Wl,-z,now
block.c: In function 'IntersectBlockL':
block.c:314:25: warning: operation on '*(B2->b + (sizetype)e)' may be undefined [-Wsequence-point]
314 | if((B2->b[e] = B1->b[e]) & B2->b[e]) {B2->list[k++]=e; }
| ~~~~~~~~~~^~~~~~~~~~~
gblast.c: In function 'MakeGBlast':
gblast.c:110:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
110 | for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best);
| ^~~
gblast.c:110:54: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
110 | for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best);
| ^~~~
gblast.c:14:21: warning: variable 'time1' set but not used [-Wunused-but-set-variable]
14 | long time1;
| ^~~~~
gblast.c:11:19: warning: variable 'R' set but not used [-Wunused-but-set-variable]
11 | int **R;
| ^
sequence.c: In function 'RandomizeSeq':
sequence.c:235:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
235 | if(E->info!=NULL)free(E->info); E->info = NULL; return E;
| ^~
sequence.c:235:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
235 | if(E->info!=NULL)free(E->info); E->info = NULL; return E;
| ^
sequence.c: In function 'ShuffleSeq':
sequence.c:290:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
290 | if(E->info!=NULL)free(E->info); E->info = NULL;
| ^~
sequence.c:290:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
290 | if(E->info!=NULL)free(E->info); E->info = NULL;
| ^
sequence.c: In function 'ShuffleSeq2':
sequence.c:309:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
309 | if(E->info!=NULL)free(E->info); E->info = NULL;
| ^~
sequence.c:309:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
309 | if(E->info!=NULL)free(E->info); E->info = NULL;
| ^
sequence.c: In function 'CenterSeqHSP':
sequence.c:429:27: warning: variable 'score' set but not used [-Wunused-but-set-variable]
429 | long v,n,n1,n2,score=0,e,start,end;
| ^~~~~
make[2]: Leaving directory '/build/reproducible-path/glam2-1064/purge'
make[1]: Leaving directory '/build/reproducible-path/glam2-1064'
dh_auto_test -O--sourcedirectory=src
create-stamp debian/debhelper-build-stamp
dh_testroot -O--sourcedirectory=src
dh_prep -O--sourcedirectory=src
dh_auto_install --destdir=debian/glam2/ -O--sourcedirectory=src
debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/glam2-1064'
dh_install
# purge is renamed glam2-purge to avoid namespace problems.
mv /build/reproducible-path/glam2-1064/debian/glam2/usr/bin/purge /build/reproducible-path/glam2-1064/debian/glam2/usr/bin/glam2-purge
# FFT is enabled by default in Debian.
mv /build/reproducible-path/glam2-1064/debian/glam2/usr/bin/glam2fft /build/reproducible-path/glam2-1064/debian/glam2/usr/bin/glam2
make[1]: Leaving directory '/build/reproducible-path/glam2-1064'
dh_installdocs -O--sourcedirectory=src
dh_installchangelogs -O--sourcedirectory=src
dh_installexamples -O--sourcedirectory=src
dh_installman -O--sourcedirectory=src
dh_installsystemduser -O--sourcedirectory=src
dh_perl -O--sourcedirectory=src
dh_link -O--sourcedirectory=src
dh_strip_nondeterminism -O--sourcedirectory=src
debian/rules override_dh_compress
make[1]: Entering directory '/build/reproducible-path/glam2-1064'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/build/reproducible-path/glam2-1064'
dh_fixperms -O--sourcedirectory=src
dh_missing -O--sourcedirectory=src
dh_dwz -a -O--sourcedirectory=src
dh_strip -a -O--sourcedirectory=src
dh_makeshlibs -a -O--sourcedirectory=src
dh_shlibdeps -a -O--sourcedirectory=src
dh_installdeb -O--sourcedirectory=src
dh_gencontrol -O--sourcedirectory=src
dh_md5sums -O--sourcedirectory=src
dh_builddeb -O--sourcedirectory=src
dpkg-deb: building package 'glam2' in '../glam2_1064-10_i386.deb'.
dpkg-deb: building package 'glam2-dbgsym' in '../glam2-dbgsym_1064-10_i386.deb'.
dpkg-genbuildinfo --build=binary -O../glam2_1064-10_i386.buildinfo
dpkg-genchanges --build=binary -O../glam2_1064-10_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/812 and its subdirectories
I: Current time: Tue Feb 25 10:54:40 -12 2025
I: pbuilder-time-stamp: 1740524080
Tue Feb 25 22:54:42 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net.
Tue Feb 25 22:54:42 UTC 2025 I: Preparing to do remote build '2' on ionos6-i386.debian.net.
Tue Feb 25 22:55:33 UTC 2025 I: Deleting $TMPDIR on ionos6-i386.debian.net.
Tue Feb 25 22:55:34 UTC 2025 I: glam2_1064-10_i386.changes:
Format: 1.8
Date: Tue, 03 Dec 2024 13:28:48 +0100
Source: glam2
Binary: glam2 glam2-dbgsym
Architecture: i386
Version: 1064-10
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
glam2 - gapped protein motifs from unaligned sequences
Closes: 1081315
Changes:
glam2 (1064-10) unstable; urgency=medium
.
* Fix Homepage
Closes: #1081315
* Standards-Version: 4.7.0 (routine-update)
Checksums-Sha1:
8d3eb968b6efb1ef3a25fafa1147fe4e8c93a211 219356 glam2-dbgsym_1064-10_i386.deb
1ef758ca9b92263360da037c2575310eed3d3925 4974 glam2_1064-10_i386.buildinfo
1bc4de9f473f478d527c7bfe4c43b7fb75a3e015 239284 glam2_1064-10_i386.deb
Checksums-Sha256:
a30097ccbc52ad1d63ef2a463a3827513fc0055e3f7f5614207fd1d94c4391ff 219356 glam2-dbgsym_1064-10_i386.deb
275d9f60442f6a0c7a33e903341a46dcfb3a65b5cf8aa5c0b9057f988c13d858 4974 glam2_1064-10_i386.buildinfo
acaebee670911aa724968a9554a2a7e6a592b1022560278d5daac490c8ee2bc7 239284 glam2_1064-10_i386.deb
Files:
15bff73fda8df89d22e55bbd5d5237f3 219356 debug optional glam2-dbgsym_1064-10_i386.deb
0f43901f45d0c620149172d64c39e490 4974 science optional glam2_1064-10_i386.buildinfo
bc9fae3d064d4e9e165c4b07bbce418b 239284 science optional glam2_1064-10_i386.deb
Tue Feb 25 22:55:34 UTC 2025 I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-i386_9-45248.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/glam2_1064-10.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/glam2_1064-10.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/glam2_1064-10.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/b1/glam2_1064-10_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.NlykCXH0/b2/glam2_1064-10_i386.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.003s)
0.003s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 223ms
CPU time consumed: 223ms
Tue Feb 25 22:55:36 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists.
Tue Feb 25 22:55:36 UTC 2025 I: glam2 from unstable built successfully and reproducibly on i386.
Tue Feb 25 22:55:37 UTC 2025 I: Submitting .buildinfo files to external archives:
Tue Feb 25 22:55:37 UTC 2025 I: Submitting 8.0K b1/glam2_1064-10_i386.buildinfo.asc
Tue Feb 25 22:55:58 UTC 2025 I: Submitting 8.0K b2/glam2_1064-10_i386.buildinfo.asc
Tue Feb 25 22:56:18 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Tue Feb 25 22:56:18 UTC 2025 I: Done submitting .buildinfo files.
Tue Feb 25 22:56:18 UTC 2025 I: Removing signed glam2_1064-10_i386.buildinfo.asc files:
removed './b1/glam2_1064-10_i386.buildinfo.asc'
removed './b2/glam2_1064-10_i386.buildinfo.asc'