Sat Jan 25 16:09:52 UTC 2025 I: starting to build pbsim/unstable/i386 on jenkins on '2025-01-25 16:09' Sat Jan 25 16:09:52 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_7/54624/console.log Sat Jan 25 16:09:52 UTC 2025 I: Downloading source for unstable/pbsim=1.0.3+git20180330.e014b1d+dfsg-3 --2025-01-25 16:09:52-- http://deb.debian.org/debian/pool/main/p/pbsim/pbsim_1.0.3%2bgit20180330.e014b1d%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2138 (2.1K) [text/prs.lines.tag] Saving to: ‘pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc’ 0K .. 100% 320M=0s 2025-01-25 16:09:52 (320 MB/s) - ‘pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc’ saved [2138/2138] Sat Jan 25 16:09:52 UTC 2025 I: pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pbsim Binary: pbsim Architecture: any Version: 1.0.3+git20180330.e014b1d+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://github.com/pfaucon/PBSIM-PacBio-Simulator Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/pbsim Vcs-Git: https://salsa.debian.org/med-team/pbsim.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), asciidoctor Package-List: pbsim deb science optional arch=any Checksums-Sha1: 57c945ecc63de65e191c90197eeac530c95f428d 5305084 pbsim_1.0.3+git20180330.e014b1d+dfsg.orig.tar.xz 4758b6129c5f1aaf9a1121b59fd4c6f59fc2d815 80188 pbsim_1.0.3+git20180330.e014b1d+dfsg-3.debian.tar.xz Checksums-Sha256: 043fef0df0c32c34407241a3dda095be3f6248bcc013f49bac160d289df872aa 5305084 pbsim_1.0.3+git20180330.e014b1d+dfsg.orig.tar.xz cf0e59ee1818664aa9470d8ac4182b4eff94d01446a4a4e0a06520ad519ec7a0 80188 pbsim_1.0.3+git20180330.e014b1d+dfsg-3.debian.tar.xz Files: e2fd933c47e7ab290d65ed65d7b14499 5305084 pbsim_1.0.3+git20180330.e014b1d+dfsg.orig.tar.xz aa63d72483ace74a1a29e0398919e69c 80188 pbsim_1.0.3+git20180330.e014b1d+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmP+9x4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFlUA/9GqTXpicyAbaiaeXRlol5tctJUH7plZyL bZG9Bcii2tvXvMqc1SI58C7Bw6BjJm2R5A4tFFRizYVyb2TXUs3hNxq+2olQHtuX MI8OSWGJutTJ+U2ojmi0KwI8jKCydkylNksKbk98Uk2UdeNN/kJC3iv8ItBjJoUm oF9UORmfXI5aT5HOP7mNaeU169bLPe+RC42W3hmBHK9dxqMQOPTMfba5T7yCUyae O8eLUUJjXrz22EuuZA/DC3MPMMjy0pqaOdU3CN5Gg+Qbci5j9IYWLjx0xL0f0A8B MvSDu1ChsAZ6K1L9R3rADibJGW67nmFB9H4NvltThNKKyz7aGKVgxgOn8ItxQtz+ A4ZLkWHWz7OYuGOdHKjp5Es16p8EJ5uEQYROoX06fU6ZEwpZvb5zADGdRTdIbbt0 WnMqD/rA/ydldFOTAjW9voJdzpAjlKlLeAa9mrA4iqEnzpHxstzXhYzGrub9Mm55 1DShfXvhR55u1TGwmF9+/sUQ8tgI2LFlk7SOwuw2vynpK+KggF/j2g0XrQz1pQ9m L7mF+zyG9CVk+CXCVv/PdyQ8bW/lJqtnEJh+U/vP+TY9wkbpcmPGkaPDdKpJGDtw sb1PPpfrGWCjkbt2QhSlf1ALne9MPWGnrsPx1xRKN9nM32jLxxs0GUAbtOydrJ7W /6XRdnQgjSY= =Gwdn -----END PGP SIGNATURE----- Sat Jan 25 16:09:52 UTC 2025 I: Checking whether the package is not for us Sat Jan 25 16:09:52 UTC 2025 I: Starting 1st build on remote node ionos12-i386.debian.net. Sat Jan 25 16:09:52 UTC 2025 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Sat Jan 25 16:10:44 UTC 2025 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jan 25 04:09:54 -12 2025 I: pbuilder-time-stamp: 1737821394 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc] I: copying [./pbsim_1.0.3+git20180330.e014b1d+dfsg.orig.tar.xz] I: copying [./pbsim_1.0.3+git20180330.e014b1d+dfsg-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc: unsupported subcommand dpkg-source: info: extracting pbsim in pbsim-1.0.3+git20180330.e014b1d+dfsg dpkg-source: info: unpacking pbsim_1.0.3+git20180330.e014b1d+dfsg.orig.tar.xz dpkg-source: info: unpacking pbsim_1.0.3+git20180330.e014b1d+dfsg-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/40297/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='a854b3634b514bd5a1cc25d131d0f869' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='40297' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/pbuilderrc_4LjU --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/b1 --logfile b1/build.log pbsim_1.0.3+git20180330.e014b1d+dfsg-3.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-30-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.124-1 (2025-01-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/40297/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), asciidoctor dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19818 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on asciidoctor; however: Package asciidoctor is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: asciidoctor{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libffi8{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libruby{a} libruby3.3{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} libyaml-0-2{a} m4{a} man-db{a} openssl{a} po-debconf{a} rake{a} ruby{a} ruby-asciidoctor{a} ruby-did-you-mean{a} ruby-minitest{a} ruby-net-telnet{a} ruby-power-assert{a} ruby-rubygems{a} ruby-sdbm{a} ruby-test-unit{a} ruby-webrick{a} ruby-xmlrpc{a} ruby3.3{a} rubygems-integration{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-lato libarchive-cpio-perl libjs-jquery libltdl-dev libmail-sendmail-perl lynx wget zip 0 packages upgraded, 51 newly installed, 0 to remove and 0 not upgraded. Need to get 30.7 MB of archives. After unpacking 117 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 openssl i386 3.4.0-2 [1427 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-1 [96.1 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 rubygems-integration all 1.19 [5488 B] Get: 14 http://deb.debian.org/debian unstable/main i386 rake all 13.2.1-1 [65.2 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 ruby-did-you-mean all 1.6.3-2 [20.9 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 ruby-minitest all 5.22.3-1 [64.4 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 ruby-power-assert all 2.0.3-1 [11.8 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 ruby-test-unit all 3.6.2-1 [79.1 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 ruby-webrick all 1.8.1-1 [51.4 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 ruby-xmlrpc all 0.3.3-2 [24.4 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libruby i386 1:3.3~3.1 [5008 B] Get: 23 http://deb.debian.org/debian unstable/main i386 ruby-sdbm i386 1.0.0-5+b6 [20.3 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libyaml-0-2 i386 0.2.5-2 [55.8 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libruby3.3 i386 3.3.6-1.1 [6376 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 ruby3.3 i386 3.3.6-1.1 [820 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 ruby-rubygems all 3.6.3-1 [406 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 ruby i386 1:3.3~3.1 [6112 B] Get: 30 http://deb.debian.org/debian unstable/main i386 ruby-asciidoctor all 2.0.23-1 [214 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 asciidoctor all 2.0.23-1 [88.7 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-5 [301 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-2 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get: 43 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB] Fetched 30.7 MB in 1s (24.4 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19818 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../01-openssl_3.4.0-2_i386.deb ... Unpacking openssl (3.4.0-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../02-ca-certificates_20241223_all.deb ... Unpacking ca-certificates (20241223) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.4-1_i386.deb ... Unpacking bsdextrautils (2.40.4-1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package rubygems-integration. Preparing to unpack .../12-rubygems-integration_1.19_all.deb ... Unpacking rubygems-integration (1.19) ... Selecting previously unselected package rake. Preparing to unpack .../13-rake_13.2.1-1_all.deb ... Unpacking rake (13.2.1-1) ... Selecting previously unselected package ruby-did-you-mean. Preparing to unpack .../14-ruby-did-you-mean_1.6.3-2_all.deb ... Unpacking ruby-did-you-mean (1.6.3-2) ... Selecting previously unselected package ruby-minitest. Preparing to unpack .../15-ruby-minitest_5.22.3-1_all.deb ... Unpacking ruby-minitest (5.22.3-1) ... Selecting previously unselected package ruby-net-telnet. Preparing to unpack .../16-ruby-net-telnet_0.2.0-1_all.deb ... Unpacking ruby-net-telnet (0.2.0-1) ... Selecting previously unselected package ruby-power-assert. Preparing to unpack .../17-ruby-power-assert_2.0.3-1_all.deb ... Unpacking ruby-power-assert (2.0.3-1) ... Selecting previously unselected package ruby-test-unit. Preparing to unpack .../18-ruby-test-unit_3.6.2-1_all.deb ... Unpacking ruby-test-unit (3.6.2-1) ... Selecting previously unselected package ruby-webrick. Preparing to unpack .../19-ruby-webrick_1.8.1-1_all.deb ... Unpacking ruby-webrick (1.8.1-1) ... Selecting previously unselected package ruby-xmlrpc. Preparing to unpack .../20-ruby-xmlrpc_0.3.3-2_all.deb ... Unpacking ruby-xmlrpc (0.3.3-2) ... Selecting previously unselected package libruby:i386. Preparing to unpack .../21-libruby_1%3a3.3~3.1_i386.deb ... Unpacking libruby:i386 (1:3.3~3.1) ... Selecting previously unselected package ruby-sdbm:i386. Preparing to unpack .../22-ruby-sdbm_1.0.0-5+b6_i386.deb ... Unpacking ruby-sdbm:i386 (1.0.0-5+b6) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../23-libffi8_3.4.6-1_i386.deb ... Unpacking libffi8:i386 (3.4.6-1) ... Selecting previously unselected package libyaml-0-2:i386. Preparing to unpack .../24-libyaml-0-2_0.2.5-2_i386.deb ... Unpacking libyaml-0-2:i386 (0.2.5-2) ... Selecting previously unselected package libruby3.3:i386. Preparing to unpack .../25-libruby3.3_3.3.6-1.1_i386.deb ... Unpacking libruby3.3:i386 (3.3.6-1.1) ... Selecting previously unselected package ruby3.3. Preparing to unpack .../26-ruby3.3_3.3.6-1.1_i386.deb ... Unpacking ruby3.3 (3.3.6-1.1) ... Selecting previously unselected package ruby-rubygems. Preparing to unpack .../27-ruby-rubygems_3.6.3-1_all.deb ... Unpacking ruby-rubygems (3.6.3-1) ... Selecting previously unselected package ruby. Preparing to unpack .../28-ruby_1%3a3.3~3.1_i386.deb ... Unpacking ruby (1:3.3~3.1) ... Selecting previously unselected package ruby-asciidoctor. Preparing to unpack .../29-ruby-asciidoctor_2.0.23-1_all.deb ... Unpacking ruby-asciidoctor (2.0.23-1) ... Selecting previously unselected package asciidoctor. Preparing to unpack .../30-asciidoctor_2.0.23-1_all.deb ... Unpacking asciidoctor (2.0.23-1) ... Selecting previously unselected package m4. Preparing to unpack .../31-m4_1.4.19-5_i386.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../32-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../33-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../34-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../35-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../36-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../37-libtool_2.5.4-2_all.deb ... Unpacking libtool (2.5.4-2) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../38-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../39-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. 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Preparing to unpack .../46-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../47-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../48-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../49-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../50-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-6) ... Setting up bsdextrautils (2.40.4-1) ... Setting up ruby-power-assert (2.0.3-1) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:i386 (0.2.5-2) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up ruby-minitest (5.22.3-1) ... Setting up autotools-dev (20220109.1) ... Setting up ruby-test-unit (3.6.2-1) ... Setting up ruby-net-telnet (0.2.0-1) ... Setting up libunistring5:i386 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up ruby-webrick (1.8.1-1) ... Setting up libffi8:i386 (3.4.6-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up ruby-did-you-mean (1.6.3-2) ... Setting up openssl (3.4.0-2) ... Setting up ruby-xmlrpc (0.3.3-2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-1) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up dh-strip-nondeterminism (1.14.1-1) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up rubygems-integration (1.19) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Setting up rake (13.2.1-1) ... Setting up libruby:i386 (1:3.3~3.1) ... Setting up ruby-sdbm:i386 (1.0.0-5+b6) ... Setting up libruby3.3:i386 (3.3.6-1.1) ... Setting up ruby3.3 (3.3.6-1.1) ... Setting up ruby (1:3.3~3.1) ... Setting up ruby-asciidoctor (2.0.23-1) ... Setting up asciidoctor (2.0.23-1) ... Setting up ruby-rubygems (3.6.3-1) ... Processing triggers for libc-bin (2.40-6) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pbsim_1.0.3+git20180330.e014b1d+dfsg-3_source.changes dpkg-buildpackage: info: source package pbsim dpkg-buildpackage: info: source version 1.0.3+git20180330.e014b1d+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' rm -f debian/pbsim.1 dh_auto_clean -- make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:7: warning: The macro 'AC_CONFIG_HEADER' is obsolete. configure.ac:7: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:7: the top level configure.ac:17: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:17: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:17: the top level configure.ac:21: warning: The macro 'AC_HEADER_TIME' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/headers.m4:702: AC_HEADER_TIME is expanded from... configure.ac:21: the top level configure.ac:12: installing './compile' configure.ac:24: installing './config.guess' configure.ac:24: installing './config.sub' configure.ac:8: installing './install-sh' configure.ac:8: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/time.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for sys/time.h... (cached) yes checking for unistd.h... (cached) yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for GNU libc compatible malloc... yes checking for floor... no checking for gettimeofday... yes checking for memset... yes checking for pow... no checking for sqrt... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build make -j11 make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make all-recursive make[2]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' Making all in src make[3]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o helpers.o helpers.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o output.o output.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pbsim.o pbsim.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o pbsim helpers.o output.o pbsim.o make[3]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[3]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[3]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[2]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' dh_auto_test make -j11 check "TESTSUITEFLAGS=-j11 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' Making check in src make[2]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[2]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[2]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' dh_auto_install -- make -j11 install DESTDIR=/build/reproducible-path/pbsim-1.0.3\+git20180330.e014b1d\+dfsg/debian/pbsim AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' Making install in src make[3]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[4]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/debian/pbsim/usr/bin' /usr/bin/install -c pbsim '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/debian/pbsim/usr/bin' make[4]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[3]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg/src' make[3]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[4]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[3]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' make[2]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' mkdir -p debian/pbsim/usr/share/pbsim/models cp -p data/* debian/pbsim/usr/share/pbsim/models make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' mkdir -p debian/pbsim/usr/share/doc/pbsim/ cp README debian/pbsim/usr/share/doc/pbsim dh_installdocs -- make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' asciidoctor -a docdate='' -b manpage debian/pbsim.1.adoc dh_installman -- make[1]: Leaving directory '/build/reproducible-path/pbsim-1.0.3+git20180330.e014b1d+dfsg' dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'pbsim' in '../pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb'. dpkg-deb: building package 'pbsim-dbgsym' in '../pbsim-dbgsym_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb'. dpkg-genbuildinfo --build=binary -O../pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo dpkg-genchanges --build=binary -O../pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/40297 and its subdirectories I: Current time: Sat Jan 25 04:10:44 -12 2025 I: pbuilder-time-stamp: 1737821444 Sat Jan 25 16:10:45 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Sat Jan 25 16:10:45 UTC 2025 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Sat Jan 25 16:11:25 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. Sat Jan 25 16:11:26 UTC 2025 I: pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.changes: Format: 1.8 Date: Wed, 01 Mar 2023 07:45:44 +0100 Source: pbsim Binary: pbsim pbsim-dbgsym Architecture: i386 Version: 1.0.3+git20180330.e014b1d+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: pbsim - simulator for PacBio sequencing reads Changes: pbsim (1.0.3+git20180330.e014b1d+dfsg-3) unstable; urgency=medium . * Team upload. * Packaging update * Standards-Version: 4.6.2 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Update renamed lintian tag names in lintian overrides. * Set upstream metadata fields: Repository-Browse. Checksums-Sha1: ca439b9038353e47c1be492877df69d36047822c 41404 pbsim-dbgsym_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb c718d3e8f7ac0446c16c8605c2d26b5f58f270c8 5724 pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo 0be1d2c43db6b9ecf1fb2f99cc8fdedb6eefc72f 26632 pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb Checksums-Sha256: 65628a3a07e45947be043145c0fc116a1500889230b4bb930be39483452f8b3b 41404 pbsim-dbgsym_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb 904f85995156460962fb90e03c7580cabd2a55031cd65c863dcc14013562ad2a 5724 pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo 064ad425d3f33a01beee8f013eefd099f3fa90fc430bbcfcee73e5c26d962465 26632 pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb Files: d8dc99c52b83a2335f23fde44659cf04 41404 debug optional pbsim-dbgsym_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb 6dd65562468e445d474ffcca89f7070c 5724 science optional pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo 3b2b99927cabdadc0fdea97527c7053e 26632 science optional pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.deb Sat Jan 25 16:11:27 UTC 2025 I: diffoscope 285 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_7-54624.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/pbsim_1.0.3+git20180330.e014b1d+dfsg-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/pbsim_1.0.3+git20180330.e014b1d+dfsg-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/pbsim_1.0.3+git20180330.e014b1d+dfsg-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/b1/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.OC4jbLjK/b2/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.337s) 0.337s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.015s) 0.015s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 662ms CPU time consumed: 663ms Sat Jan 25 16:11:28 UTC 2025 I: diffoscope 285 found no differences in the changes files, and a .buildinfo file also exists. Sat Jan 25 16:11:28 UTC 2025 I: pbsim from unstable built successfully and reproducibly on i386. Sat Jan 25 16:11:29 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Jan 25 16:11:29 UTC 2025 I: Submitting 8.0K b1/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo.asc Sat Jan 25 16:11:30 UTC 2025 I: Submitting 8.0K b2/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo.asc Sat Jan 25 16:11:30 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jan 25 16:11:30 UTC 2025 I: Done submitting .buildinfo files. Sat Jan 25 16:11:30 UTC 2025 I: Removing signed pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo.asc files: removed './b1/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo.asc' removed './b2/pbsim_1.0.3+git20180330.e014b1d+dfsg-3_i386.buildinfo.asc'