Sat Mar 22 08:06:22 UTC 2025 I: starting to build piler/unstable/i386 on jenkins on '2025-03-22 08:06' Sat Mar 22 08:06:22 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_1/60447/console.log Sat Mar 22 08:06:22 UTC 2025 I: Downloading source for unstable/piler=0~20140707-4 --2025-03-22 08:06:23-- http://deb.debian.org/debian/pool/main/p/piler/piler_0%7e20140707-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1930 (1.9K) [text/prs.lines.tag] Saving to: ‘piler_0~20140707-4.dsc’ 0K . 100% 36.6M=0s 2025-03-22 08:06:23 (36.6 MB/s) - ‘piler_0~20140707-4.dsc’ saved [1930/1930] Sat Mar 22 08:06:23 UTC 2025 I: piler_0~20140707-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: piler Binary: piler Architecture: any Version: 0~20140707-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://www.drive5.com/piler/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/piler Vcs-Git: https://salsa.debian.org/med-team/piler.git Build-Depends: debhelper-compat (= 13) Package-List: piler deb science optional arch=any Checksums-Sha1: 22d2efa728cbf1df306e723fcdc6ae68b8c05d38 39827 piler_0~20140707.orig.tar.gz b23bd6f18aaf6f4ba00da40f51b985b25ed1c286 3156 piler_0~20140707-4.debian.tar.xz Checksums-Sha256: 3b1be91c497bdb22eac8032a60c9f815bdcd03edc5b25d925314a02f54bec44f 39827 piler_0~20140707.orig.tar.gz 05a2e28e1edc6fa8de799016274e2639a0a266844b64293ca2efdb1b298e8055 3156 piler_0~20140707-4.debian.tar.xz Files: 6f351fb437d0cc6a1ec84f41998621c9 39827 piler_0~20140707.orig.tar.gz f425ff7639d028334c14bdc1cf6aab11 3156 piler_0~20140707-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWg144RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGzYQ//XlUulygO1dWY8RZqfW5bG1CHr7SwoZhG j9aeQpObNdSyW5xvOvQNL8EZblEKxanpyuSA/OLN0N1IO4BwY0FG6jt8BUNreN3v wK+vQgTNsTBUWH4SH6+cjRTd3lEcT0buxqeiJELeRnZgktSGJHz7lEnqLN4Rnaux +WLk3tXvhwid24vHpKra/uTmJ/Dxg36rC7M8i1sShj7wVvjVpf5SL1e9uuYK5gmq 5eoSgSlaqHYyAeDIyNoS41VQstXjnFHxVOCHuA9ymyi+nJmizm48jOLby8Hznsie o4ku72uNQIndKmkZhZLmTeeDX8478i9d/Xf6zIACvko6qim9QK8BZcmafMDVEPjg ohNx+xgWhtfesh7jiFYgvmOK6Na5ZSBh1TKaUv0HlKuSVl/hxyeKQqBWQs6SX/rC U4qZo5/txRiSTpBjQUSkzofdQjaBAm5TbkQX8o7I+tQI6Eo3O7KBuicRnoTxOisa DXODSX0hppGI5IkVVPD+EtGxUuMiFnII5C25B0jPYFHM6tzinIDMJvGrm5DnRUwq 5TJXoazz5Axh1Ax27qcBXLrBt/VU5IXobhRn4f0LVuh3yAQW/gPtZIHFJjI23jx1 reNgrJgF0t/5YlDlRRKNGdHSXuHYxoaeAz3rGXwgKIgJr2WVrQExK75Rb1cMBN6q P9DNFb9VlPw= =BJct -----END PGP SIGNATURE----- Sat Mar 22 08:06:23 UTC 2025 I: Checking whether the package is not for us Sat Mar 22 08:06:23 UTC 2025 I: Starting 1st build on remote node ionos2-i386.debian.net. Sat Mar 22 08:06:23 UTC 2025 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Sat Mar 22 08:07:04 UTC 2025 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Mar 21 20:06:25 -12 2025 I: pbuilder-time-stamp: 1742630785 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [piler_0~20140707-4.dsc] I: copying [./piler_0~20140707.orig.tar.gz] I: copying [./piler_0~20140707-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./piler_0~20140707-4.dsc: unsupported subcommand dpkg-source: info: extracting piler in piler-0~20140707 dpkg-source: info: unpacking piler_0~20140707.orig.tar.gz dpkg-source: info: unpacking piler_0~20140707-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying compiler-flags.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23394/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='b7204ff3ecbe477e97808338aa72ef53' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='23394' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/pbuilderrc_Fken --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/b1 --logfile b1/build.log piler_0~20140707-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/23394/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19793 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu76{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 21.2 MB of archives. After unpacking 81.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-3 [337 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-3 [117 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-3 [43.4 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libicu76 i386 76.1-3 [9893 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.3+b1 [734 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB] Fetched 21.2 MB in 1s (28.0 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19793 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-3_i386.deb ... Unpacking libmagic-mgc (1:5.46-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.46-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.46-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-3_i386.deb ... Unpacking file (1:5.46-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../23-libunistring5_1.3-1_i386.deb ... Unpacking libunistring5:i386 (1.3-1) ... Selecting previously unselected package libicu76:i386. Preparing to unpack .../24-libicu76_76.1-3_i386.deb ... Unpacking libicu76:i386 (76.1-3) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.3+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.3+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up bsdextrautils (2.40.4-5) ... Setting up libmagic-mgc (1:5.46-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:i386 (1:5.46-3) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.46-3) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:i386 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libicu76:i386 (76.1-3) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.3+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.41-6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/piler-0~20140707/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../piler_0~20140707-4_source.changes dpkg-buildpackage: info: source package piler dpkg-buildpackage: info: source version 0~20140707-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j11 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/piler-0~20140707' g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 annot.cpp -o annot.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 annotedge.cpp -o annotedge.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 cons.cpp -o cons.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 contigs.cpp -o contigs.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 crisp.cpp -o crisp.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 findcc.cpp -o findcc.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 gff.cpp -o gff.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 gff2.cpp -o gff2.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 gffset.cpp -o gffset.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 glix.cpp -o glix.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 hash.cpp -o hash.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ hash.cpp: In function 'unsigned int Hash(const char*)': hash.cpp:78:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 78 | register ub1 *k = (ub1 *) key; | ^ hash.cpp:79:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 79 | register ub4 length = (ub4) strlen(key); /* the length of the key */ | ^~~~~~ hash.cpp:81:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 81 | register ub4 a,b,c,len; | ^ hash.cpp:81:19: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 81 | register ub4 a,b,c,len; | ^ hash.cpp:81:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 81 | register ub4 a,b,c,len; | ^ hash.cpp:81:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 81 | register ub4 a,b,c,len; | ^~~ hash.cpp: In function 'unsigned int Hash(const char*, unsigned int)': hash.cpp:123:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 123 | register ub1 *k = (ub1 *) key; | ^ hash.cpp:124:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 124 | register ub4 length = (ub4) strlen(key); /* the length of the key */ | ^~~~~~ hash.cpp:126:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 126 | register ub4 a,b,c,len; | ^ hash.cpp:126:19: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 126 | register ub4 a,b,c,len; | ^ hash.cpp:126:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 126 | register ub4 a,b,c,len; | ^ hash.cpp:126:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 126 | register ub4 a,b,c,len; | ^~~ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 iix.cpp -o iix.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 log.cpp -o log.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 main.cpp -o main.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 makeannot.cpp -o makeannot.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 mem.cpp -o mem.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 options.cpp -o options.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 progress.cpp -o progress.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 quit.cpp -o quit.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readafa.cpp -o readafa.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readhits.cpp -o readhits.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readmfa.cpp -o readmfa.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readmotif.cpp -o readmotif.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readreps.cpp -o readreps.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 readtrs.cpp -o readtrs.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 tan.cpp -o tan.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 tanmotif2fasta.cpp -o tanmotif2fasta.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 tr.cpp -o tr.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 trs.cpp -o trs.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 trs2fasta.cpp -o trs2fasta.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 usage.cpp -o usage.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 utils.cpp -o utils.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 utils_linux.cpp -o utils_linux.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 utils_unix.cpp -o utils_unix.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 utils_win32.cpp -o utils_win32.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 writecrisp.cpp -o writecrisp.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 writefasta.cpp -o writefasta.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 writeimages.cpp -o writeimages.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 writepiles.cpp -o writepiles.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 writetrs.cpp -o writetrs.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/piler-0~20140707=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DNDEBUG=1 -o piler2 annot.o annotedge.o cons.o contigs.o crisp.o findcc.o gff.o gff2.o gffset.o glix.o hash.o iix.o log.o main.o makeannot.o mem.o options.o progress.o quit.o readafa.o readhits.o readmfa.o readmotif.o readreps.o readtrs.o tan.o tanmotif2fasta.o tr.o trs.o trs2fasta.o usage.o utils.o utils_linux.o utils_unix.o utils_win32.o writecrisp.o writefasta.o writeimages.o writepiles.o writetrs.o -Wl,-z,relro -Wl,-z,now -lm make[1]: Leaving directory '/build/reproducible-path/piler-0~20140707' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/piler/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'piler' in '../piler_0~20140707-4_i386.deb'. dpkg-deb: building package 'piler-dbgsym' in '../piler-dbgsym_0~20140707-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../piler_0~20140707-4_i386.buildinfo dpkg-genchanges --build=binary -O../piler_0~20140707-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23394 and its subdirectories I: Current time: Fri Mar 21 20:07:04 -12 2025 I: pbuilder-time-stamp: 1742630824 Sat Mar 22 08:07:05 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Sat Mar 22 08:07:05 UTC 2025 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Sat Mar 22 08:07:38 UTC 2025 I: Deleting $TMPDIR on ionos6-i386.debian.net. Sat Mar 22 08:07:38 UTC 2025 I: piler_0~20140707-4_i386.changes: Format: 1.8 Date: Fri, 12 Jan 2024 07:07:01 +0100 Source: piler Binary: piler piler-dbgsym Architecture: i386 Version: 0~20140707-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: piler - genomic repeat analysis Closes: 1047737 Changes: piler (0~20140707-4) unstable; urgency=medium . * Fix clean target Closes: #1047737 * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: dd609eee13f953dce484e989f5a687a3e529ea1f 237028 piler-dbgsym_0~20140707-4_i386.deb 45d0fa475cc71f43280e51f3b821a693090cf6df 4807 piler_0~20140707-4_i386.buildinfo bb8d9e2829be9edefd0f7900b2a975748f580cfc 43160 piler_0~20140707-4_i386.deb Checksums-Sha256: c323ccaf7cfd4469793aae1581534b7cbc12871c097423a0857fe7afcab6f476 237028 piler-dbgsym_0~20140707-4_i386.deb c528d91ca553ec87fc2f71ecfe8c80965103d246f5451f7ad2853ce9e3892aa1 4807 piler_0~20140707-4_i386.buildinfo a6d4da3bff8c097d47b38c65ef2105eedeccb2d725d9b2077770996a2d2d0027 43160 piler_0~20140707-4_i386.deb Files: 8c0b70451820e90108332e6cc0081d71 237028 debug optional piler-dbgsym_0~20140707-4_i386.deb bcb07680a51d813cc8c1f2038699e0a1 4807 science optional piler_0~20140707-4_i386.buildinfo c3302de9d8b5797e66d30f3c9c2c87d4 43160 science optional piler_0~20140707-4_i386.deb Sat Mar 22 08:07:39 UTC 2025 I: diffoscope 291 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_1-60447.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/piler_0~20140707-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/piler_0~20140707-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/piler_0~20140707-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/b1/piler_0~20140707-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.fHGHitOQ/b2/piler_0~20140707-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.004s) 0.004s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 250ms CPU time consumed: 246ms Sat Mar 22 08:07:40 UTC 2025 I: diffoscope 291 found no differences in the changes files, and a .buildinfo file also exists. Sat Mar 22 08:07:40 UTC 2025 I: piler from unstable built successfully and reproducibly on i386. Sat Mar 22 08:07:41 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Mar 22 08:07:41 UTC 2025 I: Submitting 8.0K b1/piler_0~20140707-4_i386.buildinfo.asc Sat Mar 22 08:07:43 UTC 2025 I: Submitting 8.0K b2/piler_0~20140707-4_i386.buildinfo.asc Sat Mar 22 08:07:44 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Mar 22 08:07:44 UTC 2025 I: Done submitting .buildinfo files. Sat Mar 22 08:07:44 UTC 2025 I: Removing signed piler_0~20140707-4_i386.buildinfo.asc files: removed './b1/piler_0~20140707-4_i386.buildinfo.asc' removed './b2/piler_0~20140707-4_i386.buildinfo.asc'