Sun Apr 13 14:27:52 UTC 2025 I: starting to build python-biopython/unstable/i386 on jenkins on '2025-04-13 14:27' Sun Apr 13 14:27:52 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_1/61779/console.log Sun Apr 13 14:27:52 UTC 2025 I: Downloading source for unstable/python-biopython=1.85+dfsg-4 --2025-04-13 14:27:53-- http://deb.debian.org/debian/pool/main/p/python-biopython/python-biopython_1.85%2bdfsg-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 3070 (3.0K) [text/prs.lines.tag] Saving to: ‘python-biopython_1.85+dfsg-4.dsc’ 0K .. 100% 500M=0s 2025-04-13 14:27:53 (500 MB/s) - ‘python-biopython_1.85+dfsg-4.dsc’ saved [3070/3070] Sun Apr 13 14:27:53 UTC 2025 I: python-biopython_1.85+dfsg-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-biopython Binary: python3-biopython, python-biopython-doc, python3-biopython-sql Architecture: any all Version: 1.85+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Étienne Mollier Homepage: https://biopython.org Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/python-biopython Vcs-Git: https://salsa.debian.org/med-team/python-biopython.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, python3-all, python3-setuptools Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev:native, libpython3-all-dev, python3-numpy, flex, python3-reportlab (>= 4.0.4-1~) , hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa , clustalo , clustalw [any-amd64] , dialign , dssp , emboss [!armel !armhf !i386 !hppa !m68k !powerpc !s390x !sh4] , fasttree , mafft , muscle3 [i386 amd64 x32] , ncbi-blast+ , phylip , phyml [any-amd64] , prank , probcons , python3-networkx , python3-numpydoc , python3-mysqldb , python3-matplotlib , python3-mmtf , python3-pil , python3-rdflib , python3-psycopg2 [any-amd64] , python3-pygments , python3-igraph , python3-scipy , python3-setuptools, python3-sphinx , python3-sphinx-rtd-theme , raxml [any-amd64 any-i386] , samtools [any-amd64] , t-coffee , wise Package-List: python-biopython-doc deb doc optional arch=all python3-biopython deb python optional arch=any python3-biopython-sql deb python optional arch=all Checksums-Sha1: afbb2d68f61586303333e921bc36d10556647d69 14605784 python-biopython_1.85+dfsg.orig.tar.xz 6d2ad06a168b1f423f7778a05f71a8a7949ba5b6 42804 python-biopython_1.85+dfsg-4.debian.tar.xz Checksums-Sha256: b9ba50779fd7ce3fecd12a8fad9a7530ee89209912d99094367c5d6a4dfbe0ce 14605784 python-biopython_1.85+dfsg.orig.tar.xz 677f607096cec71bfda58af51caba53bb4d418d49f807b187ee27e5a0267f6cf 42804 python-biopython_1.85+dfsg-4.debian.tar.xz Files: 2795d9f170efd52c0307f6faf2e71af5 14605784 python-biopython_1.85+dfsg.orig.tar.xz d002b7f60702ade9a9586bf683d68dc8 42804 python-biopython_1.85+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmf5bogACgkQQc5/C58b izKZSgf8DdMKk8Y74Ju8Ef4vgDZ+lNYr/ZSZiDZjiF9fyaUHpFgq23pLY5PAsQDS OedIPuXIshs7RkblvNJPOnoLq5yML9UU5ObfIIgMFZRnsCQbhCNM6E1eZA8wVwF9 p4LAvd3kUp99sQA9cZ5RetvaE40yArhb/f71X9RXrLAoKTNgKJRqJhFPVQOixUNk 4adwSPCsE1f3/zSw8d1rYfe525IHUuIw+0fUaXHoPORCaof6k/YGyjNG9ndAFePQ 3TjK1QnWsKfRodzNeu0yUkCGXrzh3Aab2Mm9oNB7gG0w8eM5OuppDADJCpzng5nZ jMEr9y4hLpv4Wivcql9IkK6sbJT+3w== =lhu+ -----END PGP SIGNATURE----- Sun Apr 13 14:27:53 UTC 2025 I: Checking whether the package is not for us Sun Apr 13 14:27:53 UTC 2025 I: Starting 1st build on remote node ionos2-i386.debian.net. Sun Apr 13 14:27:53 UTC 2025 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Sun Apr 13 14:49:01 UTC 2025 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 13 02:27:55 -12 2025 I: pbuilder-time-stamp: 1744554475 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-biopython_1.85+dfsg-4.dsc] I: copying [./python-biopython_1.85+dfsg.orig.tar.xz] I: copying [./python-biopython_1.85+dfsg-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-biopython_1.85+dfsg-4.dsc: unsupported subcommand dpkg-source: info: extracting python-biopython in python-biopython-1.85+dfsg dpkg-source: info: unpacking python-biopython_1.85+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biopython_1.85+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_mathml-qname.patch dpkg-source: info: applying privacy_breach.patch dpkg-source: info: applying privacy_breach_ie9.patch dpkg-source: info: applying croak-on-muscle5.patch dpkg-source: info: applying muscle3.patch dpkg-source: info: applying skip-scipy-in-codonalign.patch dpkg-source: info: applying fix-type-cast-i386.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/110584/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=24 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='19aa903b361c43d9b03731fbc6cb2b83' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='110584' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/pbuilderrc_3LCu --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/b1 --logfile b1/build.log python-biopython_1.85+dfsg-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/110584/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev:native, libpython3-all-dev, python3-numpy, flex, python3-reportlab (>= 4.0.4-1~), hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa, clustalo, dialign, dssp, fasttree, mafft, muscle3, ncbi-blast+, phylip, prank, probcons, python3-networkx, python3-numpydoc, python3-mysqldb, python3-matplotlib, python3-mmtf, python3-pil, python3-rdflib, python3-pygments, python3-igraph, python3-scipy, python3-setuptools, python3-sphinx, python3-sphinx-rtd-theme, raxml, t-coffee, wise dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:native. pbuilder-satisfydepends-dummy depends on libpython3-all-dev; however: Package libpython3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on python3-reportlab (>= 4.0.4-1~); however: Package python3-reportlab is not installed. pbuilder-satisfydepends-dummy depends on hevea; however: Package hevea is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-base; however: Package texlive-latex-base is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on bwa; however: Package bwa is not installed. pbuilder-satisfydepends-dummy depends on clustalo; however: Package clustalo is not installed. pbuilder-satisfydepends-dummy depends on dialign; however: Package dialign is not installed. pbuilder-satisfydepends-dummy depends on dssp; however: Package dssp is not installed. pbuilder-satisfydepends-dummy depends on fasttree; however: Package fasttree is not installed. pbuilder-satisfydepends-dummy depends on mafft; however: Package mafft is not installed. pbuilder-satisfydepends-dummy depends on muscle3; however: Package muscle3 is not installed. pbuilder-satisfydepends-dummy depends on ncbi-blast+; however: Package ncbi-blast+ is not installed. pbuilder-satisfydepends-dummy depends on phylip; however: Package phylip is not installed. pbuilder-satisfydepends-dummy depends on prank; however: Package prank is not installed. pbuilder-satisfydepends-dummy depends on probcons; however: Package probcons is not installed. pbuilder-satisfydepends-dummy depends on python3-networkx; however: Package python3-networkx is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-mysqldb; however: Package python3-mysqldb is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-mmtf; however: Package python3-mmtf is not installed. pbuilder-satisfydepends-dummy depends on python3-pil; however: Package python3-pil is not installed. pbuilder-satisfydepends-dummy depends on python3-rdflib; however: Package python3-rdflib is not installed. pbuilder-satisfydepends-dummy depends on python3-pygments; however: Package python3-pygments is not installed. pbuilder-satisfydepends-dummy depends on python3-igraph; however: Package python3-igraph is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. pbuilder-satisfydepends-dummy depends on raxml; however: Package raxml is not installed. pbuilder-satisfydepends-dummy depends on t-coffee; however: Package t-coffee is not installed. pbuilder-satisfydepends-dummy depends on wise; however: Package wise is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} bwa{a} ca-certificates{a} clustalo{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dialign{a} docutils-common{a} dssp{a} dwz{a} fasttree{a} file{a} flex{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lmodern{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libamd3{a} libapache-pom-java{a} libarchive-zip-perl{a} libargtable2-0{a} libarpack2t64{a} libblas3{a} libbrotli1{a} libcairo2{a} libcifpp-data{a} libcifpp7{a} libcolamd3{a} libcommons-logging-java{a} libcommons-parent-java{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgcrypt20{a} libgfortran5{a} libglib2.0-0t64{a} libglpk40{a} libgpg-error0{a} libgraphite2-3{a} libharfbuzz0b{a} libice6{a} libicu76{a} libidn2-0{a} libigraph3t64{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libkpathsea6{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblmdb0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmariadb3{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmpfi0{a} libnghttp2-14{a} libopenjp2-7{a} libpaper-utils{a} libpaper2{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libplfit0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsuitesparseconfig7{a} libsynctex2{a} libtcl8.6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libzopfli1{a} libzzip-0-13t64{a} m4{a} mafft{a} man-db{a} mariadb-common{a} media-types{a} muscle3{a} mysql-common{a} ncbi-blast+{a} ncbi-data{a} netbase{a} openssl{a} phylip{a} po-debconf{a} prank{a} preview-latex-style{a} probcons{a} procps{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-idna{a} python3-igraph{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mmtf{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-mysqldb{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-numpydoc{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pygments{a} python3-pyparsing{a} python3-rdflib{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-texttable{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufolib2{a} python3-urllib3{a} python3-zipp{a} python3-zopfli{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} raxml{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} t-coffee{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} wise{a} wise-data{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: amap-align curl default-jre dialign-tx dvisvgm fonts-dejavu-extra fsa isympy-common javascript-common kalign libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libgpg-error-l10n libjson-xs-perl libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsoap-lite-perl libspreadsheet-parseexcel-perl libwww-perl libx11-protocol-perl libxml-simple-perl linux-sysctl-defaults lmodern lynx muscle mustang poa proda psmisc python3-bs4 python3-cssselect python3-gdal python3-html5lib python3-html5rdf python3-olefile python3-orjson python3-pooch python3-pydot python3-pygraphviz python3-yaml ruby shared-mime-info tex-gyre texlive-plain-generic tipa tk tm-align wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 273 newly installed, 0 to remove and 0 not upgraded. Need to get 300 MB of archives. After unpacking 1154 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: hevea but it is not installable The following actions will resolve these dependencies: Install the following packages: 1) ghostscript [10.05.0~dfsg-1 (unstable)] 2) hevea [2.36-2+b3 (unstable)] 3) hicolor-icon-theme [0.18-2 (unstable)] 4) imagemagick [8:7.1.1.47+dfsg1-1 (unstable)] 5) imagemagick-7-common [8:7.1.1.47+dfsg1-1 (unstable)] 6) imagemagick-7.q16 [8:7.1.1.47+dfsg1-1 (unstable)] 7) libavahi-client3 [0.8-16 (unstable)] 8) libavahi-common-data [0.8-16 (unstable)] 9) libavahi-common3 [0.8-16 (unstable)] 10) libcom-err2 [1.47.2-1+b1 (unstable)] 11) libcups2t64 [2.4.10-2+b1 (unstable)] 12) libdav1d7 [1.5.1-1 (unstable)] 13) libdbus-1-3 [1.16.2-2 (unstable)] 14) libde265-0 [1.0.15-1+b3 (unstable)] 15) libfftw3-double3 [3.3.10-2+b1 (unstable)] 16) libgnutls30t64 [3.8.9-2 (unstable)] 17) libgs-common [10.05.0~dfsg-1 (unstable)] 18) libgs10 [10.05.0~dfsg-1 (unstable)] 19) libgs10-common [10.05.0~dfsg-1 (unstable)] 20) libgssapi-krb5-2 [1.21.3-5 (unstable)] 21) libheif-plugin-dav1d [1.19.7-1 (unstable)] 22) libheif-plugin-libde265 [1.19.7-1 (unstable)] 23) libheif1 [1.19.7-1 (unstable)] 24) libidn12 [1.43-1 (unstable)] 25) libijs-0.35 [0.35-15.2 (unstable)] 26) libjbig2dec0 [0.20-1+b3 (unstable)] 27) libk5crypto3 [1.21.3-5 (unstable)] 28) libkeyutils1 [1.6.3-5 (unstable)] 29) libkrb5-3 [1.21.3-5 (unstable)] 30) libkrb5support0 [1.21.3-5 (unstable)] 31) liblqr-1-0 [0.4.2-2.1+b2 (unstable)] 32) libmagickcore-7.q16-10 [8:7.1.1.47+dfsg1-1 (unstable)] 33) libmagickwand-7.q16-10 [8:7.1.1.47+dfsg1-1 (unstable)] 34) libnetpbm11t64 [2:11.10.02-1 (unstable)] 35) libp11-kit0 [0.25.5-3 (unstable)] 36) libraw23t64 [0.21.3-1+b1 (unstable)] 37) libstdlib-ocaml [5.3.0-2 (unstable)] 38) libtasn1-6 [4.20.0-2 (unstable)] 39) netpbm [2:11.10.02-1 (unstable)] 40) ocaml-base [5.3.0-2 (unstable)] 41) poppler-data [0.4.12-1 (unstable)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} bwa{a} ca-certificates{a} clustalo{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dialign{a} docutils-common{a} dssp{a} dwz{a} fasttree{a} file{a} flex{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lmodern{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} groff-base{a} hevea{a} hicolor-icon-theme{a} imagemagick{a} imagemagick-7-common{a} imagemagick-7.q16{a} intltool-debian{a} libamd3{a} libapache-pom-java{a} libarchive-zip-perl{a} libargtable2-0{a} libarpack2t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libbrotli1{a} libcairo2{a} libcifpp-data{a} libcifpp7{a} libcolamd3{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfftw3-double3{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgcrypt20{a} libgfortran5{a} libglib2.0-0t64{a} libglpk40{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu76{a} libidn12{a} libidn2-0{a} libigraph3t64{a} libijs-0.35{a} libimagequant0{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblmdb0{a} liblqr-1-0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmagickcore-7.q16-10{a} libmagickwand-7.q16-10{a} libmariadb3{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmpfi0{a} libnetpbm11t64{a} libnghttp2-14{a} libopenjp2-7{a} libp11-kit0{a} libpaper-utils{a} libpaper2{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libplfit0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libraw23t64{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libstdlib-ocaml{a} libsuitesparseconfig7{a} libsynctex2{a} libtasn1-6{a} libtcl8.6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libzopfli1{a} libzzip-0-13t64{a} m4{a} mafft{a} man-db{a} mariadb-common{a} media-types{a} muscle3{a} mysql-common{a} ncbi-blast+{a} ncbi-data{a} netbase{a} netpbm{a} ocaml-base{a} openssl{a} phylip{a} po-debconf{a} poppler-data{a} prank{a} preview-latex-style{a} probcons{a} procps{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-idna{a} python3-igraph{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mmtf{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-mysqldb{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-numpydoc{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pygments{a} python3-pyparsing{a} python3-rdflib{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-texttable{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufolib2{a} python3-urllib3{a} python3-zipp{a} python3-zopfli{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} raxml{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} t-coffee{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} wise{a} wise-data{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: amap-align curl dbus default-jre dialign-tx dvisvgm fonts-dejavu-extra fonts-droid-fallback fsa isympy-common javascript-common kalign krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libgpg-error-l10n libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmagickcore-7.q16-10-extra libmail-sendmail-perl libnet-dbus-perl libsoap-lite-perl libspreadsheet-parseexcel-perl libwww-perl libx11-protocol-perl libxml-simple-perl linux-sysctl-defaults lmodern lynx muscle mustang poa proda psmisc python3-bs4 python3-cssselect python3-gdal python3-html5lib python3-html5rdf python3-olefile python3-orjson python3-pooch python3-pydot python3-pygraphviz python3-yaml ruby shared-mime-info tex-gyre texlive-plain-generic tipa tk tm-align wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 314 newly installed, 0 to remove and 0 not upgraded. Need to get 318 MB of archives. After unpacking 1239 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 flex i386 2.6.4-8.2+b4 [412 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 fonts-lato all 2.015-1 [2780 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libfftw3-double3 i386 3.3.10-2+b1 [629 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1+b2 [23.4 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 16 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.3 [318 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.3 [403 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.5.1-1 [336 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.19.7-1 [12.0 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b3 [198 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.19.7-1 [16.0 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.19.7-1 [545 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.1-1 [1584 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 liblqr-1-0 i386 0.4.2-2.1+b2 [32.0 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.5.4-4 [417 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.3-2 [216 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libraw23t64 i386 0.21.3-1+b1 [409 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-2 [48.2 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-3 [360 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 imagemagick-7-common all 8:7.1.1.47+dfsg1-1 [67.5 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libmagickcore-7.q16-10 i386 8:7.1.1.47+dfsg1-1 [1898 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libmagickwand-7.q16-10 i386 8:7.1.1.47+dfsg1-1 [327 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.3-2 [860 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.3-2 [2268 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.3-1 [27.2 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-2 [260 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.3-2 [1960 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.3-2 [751 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.3-1 [10.2 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.3-1 [28.2 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.4+ds-1 [145 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-19 [735 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.4+ds-1 [5060 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 openssl i386 3.5.0-1 [1496 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-5 [338 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-5 [117 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-5 [43.5 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.41-4 [98.6 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 83 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 84 http://deb.debian.org/debian unstable/main i386 ucf all 3.0051 [42.8 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libtcl8.6 i386 8.6.16+dfsg-1 [1103 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libxft2 i386 2.3.6-1+b4 [55.3 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libxss1 i386 1:1.2.3-1+b3 [17.3 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libtk8.6 i386 8.6.16-1 [834 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-8 [618 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 blt i386 2.5.3+dfsg-8 [5984 B] Get: 96 http://deb.debian.org/debian unstable/main i386 bwa i386 0.7.18-1 [237 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libargtable2-0 i386 13-4 [18.5 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 clustalo i386 1.2.4-8 [270 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 105 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250308 [115 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 dialign i386 2.2.1-13 [138 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libcifpp-data all 7.0.9-1 [484 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libcifpp7 i386 7.0.9-1 [1077 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 dssp i386 4.4.10-1 [714 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 fasttree i386 2.1.11-2 [183 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 fonts-lyx all 2.4.3-1 [190 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libgs-common all 10.05.0~dfsg-1 [148 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libgs10-common all 10.05.0~dfsg-1 [476 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-16 [112 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-16 [46.4 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.16.2-2 [191 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-16 [50.4 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.8-2 [110 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.20.0-2 [51.6 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-5 [35.3 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.2-1+b1 [24.6 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-5 [84.3 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-5 [9820 B] Get: 137 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-5 [355 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-5 [149 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.10-2+b1 [267 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libidn12 i386 1.43-1 [49.0 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libijs-0.35 i386 0.35-15.2 [15.3 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libjbig2dec0 i386 0.20-1+b3 [67.0 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libpaper2 i386 2.2.5-0.3+b2 [17.1 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.6-1 [38.0 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2+b2 [194 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libgs10 i386 10.05.0~dfsg-1 [2712 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 ghostscript i386 10.05.0~dfsg-1 [50.0 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libnetpbm11t64 i386 2:11.10.02-1 [190 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 netpbm i386 2:11.10.02-1 [2105 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 tex-common all 6.19 [29.4 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 2.2.5-0.3+b2 [16.4 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2024.20240313.70630+ds-6 [160 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2024.20240313.70630+ds-6 [50.2 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2024.20240313.70630+ds-6 [65.8 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-6 [129 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libicu76 i386 76.1-3 [9893 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libmpfi0 i386 1.5.4+ds-4 [38.8 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b2 [24.5 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1+b1 [285 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b4 [60.8 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b3 [58.3 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.78+dfsg.1-0.1 [60.7 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2024.20240313.70630+ds-6 [8361 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 texlive-base all 2024.20250309-1 [23.1 MB] Get: 176 http://deb.debian.org/debian unstable/main i386 hicolor-icon-theme all 0.18-2 [11.8 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 imagemagick-7.q16 i386 8:7.1.1.47+dfsg1-1 [726 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 imagemagick i386 8:7.1.1.47+dfsg1-1 [20.1 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libstdlib-ocaml i386 5.3.0-2 [525 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 ocaml-base i386 5.3.0-2 [512 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 hevea i386 2.36-2+b3 [898 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 libsuitesparseconfig7 i386 1:7.10.1+dfsg-1 [32.5 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 libamd3 i386 1:7.10.1+dfsg-1 [51.9 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 33-2 [5852 B] Get: 185 http://deb.debian.org/debian unstable/main i386 libarpack2t64 i386 3.9.1-6 [102 kB] Get: 186 http://deb.debian.org/debian unstable/main i386 libcolamd3 i386 1:7.10.1+dfsg-1 [44.0 kB] Get: 187 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.7.1-1 [167 kB] Get: 190 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 libgpg-error0 i386 1.51-4 [87.3 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 libgcrypt20 i386 1.11.0-7 [799 kB] Get: 194 http://deb.debian.org/debian unstable/main i386 libglpk40 i386 5.0-1+b2 [422 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 libplfit0 i386 0.9.6+ds-2+b1 [31.1 kB] Get: 196 http://deb.debian.org/debian unstable/main i386 libigraph3t64 i386 0.10.15+ds-3 [947 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 200 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 201 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 203 http://deb.debian.org/debian unstable/main i386 liblmdb0 i386 0.9.31-1+b2 [46.9 kB] Get: 204 http://deb.debian.org/debian unstable/main i386 mysql-common all 5.8+1.1.1 [6784 B] Get: 205 http://deb.debian.org/debian unstable/main i386 mariadb-common all 1:11.8.1-2 [28.9 kB] Get: 206 http://deb.debian.org/debian unstable/main i386 libmariadb3 i386 1:11.8.1-2 [187 kB] Get: 207 http://deb.debian.org/debian unstable/main i386 libmbedcrypto16 i386 3.6.3-1 [379 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 libmbedx509-7 i386 3.6.3-1 [151 kB] Get: 209 http://deb.debian.org/debian unstable/main i386 libmbedtls21 i386 3.6.3-1 [243 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 212 http://deb.debian.org/debian unstable/main i386 libpython3.13 i386 3.13.3-2 [2205 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 libpython3.13-dev i386 3.13.3-2 [5195 kB] Get: 215 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.13.3-1 [10.4 kB] Get: 216 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.13.3-1 [1068 B] Get: 217 http://deb.debian.org/debian unstable/main i386 libqhull-r8.0 i386 2020.2-6+b2 [259 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.50.0-2 [163 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 libxslt1.1 i386 1.1.35-1.2 [243 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 libzopfli1 i386 1.0.3-3 [109 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 mafft i386 7.505-1 [1007 kB] Get: 223 http://deb.debian.org/debian unstable/main i386 muscle3 i386 3.8.1551-3 [231 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 ncbi-blast+ i386 2.16.0+ds-6+b1 [16.6 MB] Get: 226 http://deb.debian.org/debian unstable/main i386 phylip i386 1:3.697+dfsg-4 [953 kB] Get: 227 http://deb.debian.org/debian unstable/main i386 prank i386 0.0.170427+dfsg-3 [405 kB] Get: 228 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 probcons i386 1.12-14 [105 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 python-matplotlib-data all 3.10.1+dfsg1-2 [2736 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.3-1 [1048 B] Get: 234 http://deb.debian.org/debian unstable/main i386 python3.13-dev i386 3.13.3-2 [508 kB] Get: 235 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.13.3-1 [26.1 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.13.3-1 [1068 B] Get: 237 http://deb.debian.org/debian unstable/main i386 python3-attr all 25.3.0-1 [69.5 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 239 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.17.0-1 [117 kB] Get: 240 http://deb.debian.org/debian unstable/main i386 python3-brotli i386 1.1.0-2+b7 [318 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 python3-cairo i386 1.27.0-2 [117 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 243 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer i386 3.4.1-1+b1 [127 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 python3-contourpy i386 1.3.1-1+b1 [223 kB] Get: 246 http://deb.debian.org/debian unstable/main i386 python3-cycler all 0.12.1-1 [9496 B] Get: 247 http://deb.debian.org/debian unstable/main i386 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 python3-decorator all 5.2.1-1 [32.9 kB] Get: 249 http://deb.debian.org/debian unstable/main i386 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 250 http://deb.debian.org/debian unstable/main i386 python3-roman all 5.0-1 [10.6 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 python3-platformdirs all 4.3.7-1 [16.6 kB] Get: 253 http://deb.debian.org/debian unstable/main i386 python3-fs all 2.4.16-7 [95.2 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 python3-lxml i386 5.3.2-1 [1270 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 python3-lz4 i386 4.4.0+dfsg-2 [25.3 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 python3-scipy i386 1.15.2-7 [16.4 MB] Get: 257 http://deb.debian.org/debian unstable/main i386 python3-mpmath all 1.3.0-1 [419 kB] Get: 258 http://deb.debian.org/debian unstable/main i386 python3-sympy all 1.13.3-5 [4148 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 python3-zopfli i386 0.2.3.post1-1 [10.4 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 unicode-data all 15.1.0-1 [8547 kB] Get: 262 http://deb.debian.org/debian unstable/main i386 python3-fonttools i386 4.57.0-1 [1431 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 python3-freetype all 2.5.1-1 [89.3 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.10-1 [42.0 kB] Get: 265 http://deb.debian.org/debian unstable/main i386 python3-texttable all 1.7.0-1 [12.0 kB] Get: 266 http://deb.debian.org/debian unstable/main i386 python3-igraph i386 0.11.8+ds-1 [335 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 268 http://deb.debian.org/debian unstable/main i386 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 python3-typing-extensions all 4.13.2-1 [90.5 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 273 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 78.1.0-1.1 [224 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 276 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 78.1.0-1.1 [738 kB] Get: 277 http://deb.debian.org/debian unstable/main i386 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 278 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1+b3 [14.0 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.6-1 [107 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 python3-kiwisolver i386 1.4.7-3+b1 [69.7 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 python3-pil i386 11.1.0-5+b1 [518 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 python3.13-tk i386 3.13.3-2 [109 kB] Get: 283 http://deb.debian.org/debian unstable/main i386 python3-tk i386 3.13.3-1 [9544 B] Get: 284 http://deb.debian.org/debian unstable/main i386 python3-pil.imagetk i386 11.1.0-5+b1 [81.9 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 python3-pyparsing all 3.1.2-1 [146 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-3 [55.7 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 python3-matplotlib i386 3.10.1+dfsg1-2 [23.8 MB] Get: 288 http://deb.debian.org/debian unstable/main i386 python3-msgpack i386 1.0.3-3+b4 [86.1 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 python3-mmtf all 1.1.3-1 [17.0 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 python3-mysqldb i386 1.4.6-2+b5 [51.3 kB] Get: 291 http://deb.debian.org/debian unstable/main i386 python3-networkx all 3.2.1-5 [13.0 MB] Get: 292 http://deb.debian.org/debian unstable/main i386 sphinx-common all 8.1.3-5 [617 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 2.3.0-2 [114 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Get: 296 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 8.1.3-5 [468 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 python3-numpydoc all 1.8.0-1 [51.4 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 python3-rdflib all 7.1.1-2 [472 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 302 http://deb.debian.org/debian unstable/main i386 python3-reportlab all 4.3.1-1 [1158 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 305 http://deb.debian.org/debian unstable/main i386 python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [29.7 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 raxml i386 8.2.13+dfsg-2+b1 [997 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 t-coffee i386 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1035 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2024.20250309-1 [1294 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2024.20250309-1 [17.0 MB] Get: 312 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get: 313 http://deb.debian.org/debian unstable/main i386 wise-data all 2.4.1-27 [76.2 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 wise i386 2.4.1-27 [1140 kB] Fetched 318 MB in 9s (36.2 MB/s) Preconfiguring packages ... Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../00-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package flex. Preparing to unpack .../01-flex_2.6.4-8.2+b4_i386.deb ... Unpacking flex (2.6.4-8.2+b4) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../02-fonts-lato_2.015-1_all.deb ... 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Setting up mysql-common (5.8+1.1.1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libkeyutils1:i386 (1.6.3-5) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up fonts-lato (2.015-1) ... Setting up liblerc4:i386 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41-4) ... Setting up hicolor-icon-theme (0.18-2) ... Setting up probcons (1.12-14) ... Setting up libgpg-error0:i386 (1.51-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:i386 (1.17.0-2+b1) ... Setting up mafft (7.505-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up imagemagick-7-common (8:7.1.1.47+dfsg1-1) ... Setting up bwa (0.7.18-1) ... Setting up fonts-lyx (2.4.3-1) ... Setting up libijs-0.35:i386 (0.35-15.2) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libgs-common (10.05.0~dfsg-1) ... Setting up libbrotli1:i386 (1.1.0-2+b7) ... Setting up libfontbox-java (1:1.8.16-5) ... Setting up libuv1t64:i386 (1.50.0-2) ... Setting up libmagic1t64:i386 (1:5.46-5) ... Setting up phylip (1:3.697+dfsg-4) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libnghttp2-14:i386 (1.64.0-1) ... Setting up libdeflate0:i386 (1.23-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libgcrypt20:i386 (1.11.0-7) ... Setting up libqhull-r8.0:i386 (2020.2-6+b2) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up libcom-err2:i386 (1.47.2-1+b1) ... Setting up file (1:5.46-5) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libjbig0:i386 (2.1-6.1+b2) ... Setting up libnetpbm11t64:i386 (2:11.10.02-1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up python-babel-localedata (2.17.0-1) ... Setting up t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1) ... Setting up poppler-data (0.4.12-1) ... Setting up libkrb5support0:i386 (1.21.3-5) ... Setting up tzdata (2025b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Apr 13 14:28:58 UTC 2025. Universal Time is now: Sun Apr 13 14:28:58 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up mariadb-common (1:11.8.1-2) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libfontenc1:i386 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libexpat1-dev:i386 (2.7.1-1) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-3.1) ... 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Setting up dssp (4.4.10-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libglib2.0-0t64:i386 (2.84.1-1) ... No schema files found: doing nothing. Setting up libmbedx509-7:i386 (3.6.3-1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libptexenc1:i386 (2024.20240313.70630+ds-6) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libglpk40:i386 (5.0-1+b2) ... Setting up libp11-kit0:i386 (0.25.5-3) ... Setting up libgssapi-krb5-2:i386 (1.21.3-5) ... Setting up ucf (3.0051) ... Setting up netpbm (2:11.10.02-1) ... Setting up libjs-sphinxdoc (8.1.3-5) ... Setting up libmbedtls21:i386 (3.6.3-1) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up liblqr-1-0:i386 (0.4.2-2.1+b2) ... Setting up groff-base (1.23.0-7) ... 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Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (2.1.5-1+b3) ... Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up python3.13-tk (3.13.3-2) ... Setting up python3-platformdirs (4.3.7-1) ... Setting up python3-zopfli (0.2.3.post1-1) ... Setting up python3-fs (2.4.16-7) ... Setting up ncbi-blast+ (2.16.0+ds-6+b1) ... Setting up python3-mysqldb (1.4.6-2+b5) ... Setting up tex-common (6.19) ... update-language: texlive-base not installed and configured, doing nothing! Setting up python3-roman (5.0-1) ... Setting up python3-decorator (5.2.1-1) ... Setting up python3-jinja2 (3.1.6-1) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up python3-packaging (24.2-3) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b7) ... Setting up libraqm0:i386 (0.10.2-1) ... 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Setting up texlive-base (2024.20250309-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up python3-pkg-resources (78.1.0-1.1) ... Setting up python3-all-dev (3.13.3-1) ... Setting up libgs10-common (10.05.0~dfsg-1) ... Setting up python3-setuptools (78.1.0-1.1) ... Setting up python3-networkx (3.2.1-5) ... Setting up texlive-latex-base (2024.20250309-1) ... Setting up texlive-latex-recommended (2024.20250309-1) ... Setting up texlive-pictures (2024.20250309-1) ... Setting up texlive-fonts-recommended (2024.20250309-1) ... Setting up libgs10:i386 (10.05.0~dfsg-1) ... Setting up texlive-latex-extra (2024.20250309-2) ... Setting up ghostscript (10.05.0~dfsg-1) ... Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... Setting up libheif-plugin-dav1d:i386 (1.19.7-1) ... Setting up libheif-plugin-libde265:i386 (1.19.7-1) ... Setting up libheif1:i386 (1.19.7-1) ... Setting up python3-fonttools (4.57.0-1) ... Setting up libmagickcore-7.q16-10:i386 (8:7.1.1.47+dfsg1-1) ... Setting up python3-matplotlib (3.10.1+dfsg1-2) ... Setting up libmagickwand-7.q16-10:i386 (8:7.1.1.47+dfsg1-1) ... Setting up imagemagick-7.q16 (8:7.1.1.47+dfsg1-1) ... update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) doesn't exist update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) doesn't exist Setting up hevea (2.36-2+b3) ... Setting up imagemagick (8:7.1.1.47+dfsg1-1) ... Processing triggers for libc-bin (2.41-6) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-5) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-numpydoc (1.8.0-1) ... Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.19) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-biopython-1.85+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-biopython_1.85+dfsg-4_source.changes dpkg-buildpackage: info: source package python-biopython dpkg-buildpackage: info: source version 1.85+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_auto_clean pybuild --clean -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running clean removing '/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; cd Doc && make clean make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc' rm -f api/Bio*.rst rm -rf _build/doctrees rm -rf _build/html rm -rf _build/latex make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc' rm -f Doc/install/Installation.pdf rm -f Doc/install/Installation.txt rm -f Doc/install/Installation.html rm -f Doc/Tutorial.pdf Doc/biopdb_faq.pdf rm -f Doc/Tutorial/*.aux find Doc -name "*.pygtex" -o -name "*.pygstyle" -delete rm -rf biopython.egg-info rm -rf .pybuild if [ -d Tests_avoid ] ; then \ mv Tests_avoid/* Tests ; \ rmdir Tests_avoid ; \ fi rm -rf debian/tmp_tests make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars debian/files rm -fr -- debian/python3-biopython/ debian/tmp/ debian/python-biopython-doc/ debian/python3-biopython-sql/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_auto_build pybuild --build -i python{version} -p 3.13 I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/Seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/File.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/MaxEntropy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy copying Bio/Affy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy copying Bio/Affy/CelFile.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices copying Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/MsfIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet copying Bio/Alphabet/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application copying Bio/Application/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/NCBIWWW.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/_writers.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast copying Bio/Blast/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS copying Bio/CAPS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster copying Bio/Cluster/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign copying Bio/codonalign/codonseq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign copying Bio/codonalign/codonalignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign copying Bio/codonalign/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass copying Bio/Compass/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data copying Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data copying Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data copying Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data copying Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss copying Bio/Emboss/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss copying Bio/Emboss/Primer3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss copying Bio/Emboss/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez copying Bio/Entrez/Parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez copying Bio/Entrez/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank copying Bio/GenBank/Scanner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank copying Bio/GenBank/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank copying Bio/GenBank/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank copying Bio/GenBank/utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo copying Bio/Geo/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo copying Bio/Geo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/Distribution.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics copying Bio/Graphics/Comparative.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM copying Bio/HMM/Trainer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM copying Bio/HMM/Utilities.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM copying Bio/HMM/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM copying Bio/HMM/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG copying Bio/KEGG/REST.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG copying Bio/KEGG/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Compound creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Enzyme creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Gene creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Map creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/mmtfio.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Medline copying Bio/Medline/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Medline creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/clusterbuster.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/mast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/alignace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/xms.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/minimal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/thresholds.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/transfac.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/matrix.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/pfm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/motifs/meme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/Nexus/Trees.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/Nexus/Nodes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/Nexus/StandardData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/Nexus/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/Nexus/Nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR copying Bio/NMR/NOEtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR copying Bio/NMR/xpktools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR copying Bio/NMR/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway copying Bio/Pathway/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep copying Bio/PDB/internal_coords.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Entity.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/MMCIFParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Selection.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/SCADIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/FragmentMapper.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/mmcifio.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/qcprot.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PICIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/NACCESS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/ic_data.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/StructureBuilder.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Model.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/DSSP.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Atom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Residue.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/NeighborSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/HSExposure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PDBList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Superimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/ResidueDepth.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/vectors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/binary_cif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PDBParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/cealign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/ic_rebuild.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Structure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PDBIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/PDBExceptions.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/Polypeptide.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype copying Bio/phenotype/phen_micro.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype copying Bio/phenotype/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen copying Bio/PopGen/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction copying Bio/Restriction/Restriction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction copying Bio/Restriction/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Hie.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Dom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Residues.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Raf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/Cla.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP copying Bio/SCOP/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO copying Bio/SearchIO/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO copying Bio/SearchIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO copying Bio/SearchIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/GfaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/SnapGeneIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing copying Bio/Sequencing/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing copying Bio/Sequencing/Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing copying Bio/Sequencing/Phd.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt copying Bio/SwissProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS copying Bio/TogoWS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/BaseTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/NewickIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/Newick.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/_io.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene copying Bio/UniGene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt copying Bio/UniProt/GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt copying Bio/UniProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL copying BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL copying BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL copying BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL copying BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL copying BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL running egg_info creating biopython.egg-info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt writing manifest file 'biopython.egg-info/SOURCES.txt' reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'Doc/_build' warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution adding license file 'LICENSE' adding license file 'LICENSE.rst' writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are already explicitly excluding 'Bio.Align.substitution_matrices.data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.DTDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.DTDs' to be distributed and are already explicitly excluding 'Bio.Entrez.DTDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.XSDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.XSDs' to be distributed and are already explicitly excluding 'Bio.Entrez.XSDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying Bio/cpairwise2module.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio copying Bio/Align/_aligncore.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align copying Bio/Align/_pairwisealigner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/HOXD70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/STR -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/TRANS -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data copying Bio/Cluster/cluster.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster copying Bio/Cluster/cluster.h -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster copying Bio/Cluster/clustermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-format1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-list1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-math1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-references1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-section1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/epost.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary_gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs copying Bio/Nexus/cnexus.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus copying Bio/PDB/bcifhelpermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/ccealignmodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/PDB/kdtrees.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB copying Bio/SeqIO/_twoBitIO.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO copying BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL running build_ext building 'Bio.Align._codonaligner' extension creating build/temp.linux-i686-cpython-313/Bio/Align i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_codonaligner.c -o build/temp.linux-i686-cpython-313/Bio/Align/_codonaligner.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/Align/_codonaligner.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so building 'Bio.Align._pairwisealigner' extension i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-i686-cpython-313/Bio/Align/_pairwisealigner.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/Align/_pairwisealigner.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so building 'Bio.Align._aligncore' extension i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_aligncore.c -o build/temp.linux-i686-cpython-313/Bio/Align/_aligncore.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/Align/_aligncore.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so building 'Bio.cpairwise2' extension i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/cpairwise2module.c -o build/temp.linux-i686-cpython-313/Bio/cpairwise2module.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/cpairwise2module.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/cpairwise2.cpython-313-i386-linux-gnu.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-i686-cpython-313/Bio/Nexus i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Nexus/cnexus.c -o build/temp.linux-i686-cpython-313/Bio/Nexus/cnexus.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/Nexus/cnexus.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so building 'Bio.motifs._pwm' extension creating build/temp.linux-i686-cpython-313/Bio/motifs i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/motifs/_pwm.c -o build/temp.linux-i686-cpython-313/Bio/motifs/_pwm.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/motifs/_pwm.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-i686-cpython-313/Bio/Cluster i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/cluster.c -o build/temp.linux-i686-cpython-313/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/clustermodule.c -o build/temp.linux-i686-cpython-313/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/Cluster/cluster.o build/temp.linux-i686-cpython-313/Bio/Cluster/clustermodule.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so building 'Bio.PDB.ccealign' extension creating build/temp.linux-i686-cpython-313/Bio/PDB i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-i686-cpython-313/Bio/PDB/ccealignmodule.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/PDB/ccealignmodule.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so building 'Bio.PDB.kdtrees' extension i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/kdtrees.c -o build/temp.linux-i686-cpython-313/Bio/PDB/kdtrees.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/PDB/kdtrees.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so building 'Bio.PDB._bcif_helper' extension i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-i686-cpython-313/Bio/PDB/bcifhelpermodule.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/PDB/bcifhelpermodule.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so building 'Bio.SeqIO._twoBitIO' extension creating build/temp.linux-i686-cpython-313/Bio/SeqIO i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-i686-cpython-313/Bio/SeqIO/_twoBitIO.o i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/Bio/SeqIO/_twoBitIO.o -L/usr/lib/i386-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so PYTHONPATH=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build \ /usr/bin/make -C Doc html make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc' Running Sphinx v8.1.3 /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application/__init__.py:39: BiopythonDeprecationWarning: The Bio.Application modules and modules relying on it have been deprecated. Due to the on going maintenance burden of keeping command line application wrappers up to date, we have decided to deprecate and eventually remove these modules. We instead now recommend building your command line and invoking it directly with the subprocess module. warnings.warn( loading translations [en]... done making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. [autosummary] generating autosummary for: Tutorial/chapter_align.rst, Tutorial/chapter_appendix.rst, Tutorial/chapter_bibliography.rst, Tutorial/chapter_blast.rst, Tutorial/chapter_cluster.rst, Tutorial/chapter_contributing.rst, Tutorial/chapter_cookbook.rst, Tutorial/chapter_entrez.rst, Tutorial/chapter_graphics.rst, Tutorial/chapter_introduction.rst, ..., Tutorial/chapter_quick_start.rst, Tutorial/chapter_searchio.rst, Tutorial/chapter_seq_annot.rst, Tutorial/chapter_seq_objects.rst, Tutorial/chapter_seqio.rst, Tutorial/chapter_testing.rst, Tutorial/chapter_uniprot.rst, Tutorial/index.rst, api/index.rst, index.rst Creating file /tmp/tmp9zbhwbb_/BioSQL.rst. Creating file /tmp/tmp9zbhwbb_/BioSQL.BioSeq.rst. Creating file /tmp/tmp9zbhwbb_/BioSQL.BioSeqDatabase.rst. Creating file /tmp/tmp9zbhwbb_/BioSQL.DBUtils.rst. Creating file /tmp/tmp9zbhwbb_/BioSQL.Loader.rst. Creating file /tmp/tmp9zbhwbb_/conf.py. Creating file /tmp/tmp9zbhwbb_/index.rst. Creating file /tmp/tmp9zbhwbb_/Makefile. Creating file /tmp/tmp9zbhwbb_/make.bat. Creating file /tmp/tmp9zbhwbb_/Bio.rst. Creating file /tmp/tmp9zbhwbb_/Bio.File.rst. Creating file /tmp/tmp9zbhwbb_/Bio.LogisticRegression.rst. Creating file /tmp/tmp9zbhwbb_/Bio.MarkovModel.rst. Creating file /tmp/tmp9zbhwbb_/Bio.MaxEntropy.rst. Creating file /tmp/tmp9zbhwbb_/Bio.NaiveBayes.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Seq.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqFeature.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqRecord.rst. Creating file /tmp/tmp9zbhwbb_/Bio.bgzf.rst. Creating file /tmp/tmp9zbhwbb_/Bio.kNN.rst. Creating file /tmp/tmp9zbhwbb_/Bio.pairwise2.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Affy.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Affy.CelFile.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.AlignInfo.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.a2m.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.analysis.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.bed.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.bigbed.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.bigmaf.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.bigpsl.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.chain.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.clustal.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.emboss.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.exonerate.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.fasta.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.hhr.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.interfaces.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.maf.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.mauve.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.msf.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.nexus.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.phylip.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.psl.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.sam.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.stockholm.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.tabular.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.Applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Align.substitution_matrices.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.ClustalIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.EmbossIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.FastaIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.Interfaces.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.MafIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.MauveIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.MsfIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.NexusIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.PhylipIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.AlignIO.StockholmIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Application.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Blast.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Blast.Applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Blast.NCBIWWW.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Blast.NCBIXML.rst. Creating file /tmp/tmp9zbhwbb_/Bio.CAPS.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Cluster.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Compass.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Data.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Data.CodonTable.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Data.IUPACData.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Data.PDBData.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Emboss.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Emboss.Applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Emboss.Primer3.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Emboss.PrimerSearch.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Entrez.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Entrez.Parser.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.Enzyme.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.Prodoc.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.Prosite.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.ScanProsite.rst. Creating file /tmp/tmp9zbhwbb_/Bio.ExPASy.cellosaurus.rst. Creating file /tmp/tmp9zbhwbb_/Bio.GenBank.rst. Creating file /tmp/tmp9zbhwbb_/Bio.GenBank.Record.rst. Creating file /tmp/tmp9zbhwbb_/Bio.GenBank.Scanner.rst. Creating file /tmp/tmp9zbhwbb_/Bio.GenBank.utils.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Geo.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Geo.Record.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.BasicChromosome.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.ColorSpiral.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.Comparative.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.DisplayRepresentation.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.Distribution.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.KGML_vis.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Graphics.GenomeDiagram.rst. Creating file /tmp/tmp9zbhwbb_/Bio.HMM.rst. Creating file /tmp/tmp9zbhwbb_/Bio.HMM.DynamicProgramming.rst. Creating file /tmp/tmp9zbhwbb_/Bio.HMM.MarkovModel.rst. Creating file /tmp/tmp9zbhwbb_/Bio.HMM.Trainer.rst. Creating file /tmp/tmp9zbhwbb_/Bio.HMM.Utilities.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.REST.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.Compound.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.Enzyme.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.Gene.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.KGML.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.KGML.KGML_parser.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.KGML.KGML_pathway.rst. Creating file /tmp/tmp9zbhwbb_/Bio.KEGG.Map.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Medline.rst. Creating file /tmp/tmp9zbhwbb_/Bio.NMR.rst. Creating file /tmp/tmp9zbhwbb_/Bio.NMR.NOEtools.rst. Creating file /tmp/tmp9zbhwbb_/Bio.NMR.xpktools.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Nexus.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Nexus.Nexus.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Nexus.Nodes.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Nexus.StandardData.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Nexus.Trees.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.AbstractPropertyMap.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.Atom.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.Chain.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.DSSP.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.Dice.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.Entity.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.FragmentMapper.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.HSExposure.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.MMCIF2Dict.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.MMCIFParser.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.Model.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.NACCESS.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.NeighborSearch.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.PDBExceptions.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PDB.PDBIO.rst. 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Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.Consensus.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.NeXML.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.NeXMLIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.Newick.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.NewickIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.NexusIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PhyloXML.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PhyloXMLIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.TreeConstruction.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.Applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PAML.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PAML.baseml.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PAML.chi2.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PAML.codeml.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Phylo.PAML.yn00.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PopGen.rst. Creating file /tmp/tmp9zbhwbb_/Bio.PopGen.GenePop.rst. 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Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.FastaIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.BlastIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.BlastIO.blast_tab.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.BlastIO.blast_xml.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.ExonerateIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.ExonerateIO.exonerate_cigar.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.ExonerateIO.exonerate_text.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.ExonerateIO.exonerate_vulgar.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HHsuiteIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HHsuiteIO.hhsuite2_text.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HmmerIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HmmerIO.hmmer2_text.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HmmerIO.hmmer3_domtab.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HmmerIO.hmmer3_tab.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.HmmerIO.hmmer3_text.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.InterproscanIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SearchIO.InterproscanIO.interproscan_xml.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.AbiIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.AceIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.FastaIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.GckIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.GfaIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.IgIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.InsdcIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.Interfaces.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.NibIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.PdbIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.PhdIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.PirIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.QualityIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.SeqXmlIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.SffIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.SnapGeneIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.SwissIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.TabIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.TwoBitIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.UniprotIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqIO.XdnaIO.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.CheckSum.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.IsoelectricPoint.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.MeltingTemp.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.ProtParam.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.ProtParamData.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SeqUtils.lcc.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Sequencing.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Sequencing.Ace.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Sequencing.Phd.rst. Creating file /tmp/tmp9zbhwbb_/Bio.Sequencing.Applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SwissProt.rst. Creating file /tmp/tmp9zbhwbb_/Bio.SwissProt.KeyWList.rst. Creating file /tmp/tmp9zbhwbb_/Bio.TogoWS.rst. Creating file /tmp/tmp9zbhwbb_/Bio.UniGene.rst. Creating file /tmp/tmp9zbhwbb_/Bio.UniProt.rst. Creating file /tmp/tmp9zbhwbb_/Bio.UniProt.GOA.rst. Creating file /tmp/tmp9zbhwbb_/Bio.codonalign.rst. Creating file /tmp/tmp9zbhwbb_/Bio.codonalign.codonalignment.rst. Creating file /tmp/tmp9zbhwbb_/Bio.codonalign.codonseq.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.alignace.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.clusterbuster.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.mast.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.matrix.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.meme.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.minimal.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.pfm.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.thresholds.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.transfac.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.xms.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.applications.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.jaspar.rst. Creating file /tmp/tmp9zbhwbb_/Bio.motifs.jaspar.db.rst. Creating file /tmp/tmp9zbhwbb_/Bio.phenotype.rst. Creating file /tmp/tmp9zbhwbb_/Bio.phenotype.phen_micro.rst. Creating file /tmp/tmp9zbhwbb_/Bio.phenotype.pm_fitting.rst. File /tmp/tmp9zbhwbb_/conf.py already exists, skipping. File /tmp/tmp9zbhwbb_/index.rst already exists, skipping. File /tmp/tmp9zbhwbb_/Makefile already exists, skipping. File /tmp/tmp9zbhwbb_/make.bat already exists, skipping. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 29 source files that are out of date updating environment: [new config] 308 added, 0 changed, 0 removed reading sources... [ 0%] Tutorial/chapter_align reading sources... [ 1%] Tutorial/chapter_appendix reading sources... [ 1%] Tutorial/chapter_bibliography reading sources... [ 1%] Tutorial/chapter_blast reading sources... [ 2%] Tutorial/chapter_cluster reading sources... [ 2%] Tutorial/chapter_contributing reading sources... [ 2%] Tutorial/chapter_cookbook reading sources... [ 3%] Tutorial/chapter_entrez reading sources... [ 3%] Tutorial/chapter_graphics reading sources... [ 3%] Tutorial/chapter_introduction reading sources... [ 4%] Tutorial/chapter_kegg reading sources... [ 4%] Tutorial/chapter_motifs reading sources... [ 4%] Tutorial/chapter_msa reading sources... [ 5%] Tutorial/chapter_pairwise reading sources... [ 5%] Tutorial/chapter_pairwise2 reading sources... [ 5%] Tutorial/chapter_pdb reading sources... [ 6%] Tutorial/chapter_phenotype reading sources... [ 6%] Tutorial/chapter_phylo reading sources... [ 6%] Tutorial/chapter_popgen reading sources... [ 6%] Tutorial/chapter_quick_start reading sources... [ 7%] Tutorial/chapter_searchio reading sources... [ 7%] Tutorial/chapter_seq_annot reading sources... [ 7%] Tutorial/chapter_seq_objects reading sources... [ 8%] Tutorial/chapter_seqio reading sources... [ 8%] Tutorial/chapter_testing reading sources... [ 8%] Tutorial/chapter_uniprot reading sources... [ 9%] Tutorial/index reading sources... [ 9%] api/Bio reading sources... [ 9%] api/Bio.Affy reading sources... [ 10%] api/Bio.Affy.CelFile reading sources... [ 10%] api/Bio.Align reading sources... [ 10%] api/Bio.Align.AlignInfo reading sources... [ 11%] api/Bio.Align.Applications reading sources... [ 11%] api/Bio.Align.a2m reading sources... [ 11%] api/Bio.Align.analysis reading sources... 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[ 25%] api/Bio.Data.IUPACData reading sources... [ 26%] api/Bio.Data.PDBData reading sources... [ 26%] api/Bio.Emboss reading sources... [ 26%] api/Bio.Emboss.Applications reading sources... [ 27%] api/Bio.Emboss.Primer3 reading sources... [ 27%] api/Bio.Emboss.PrimerSearch reading sources... [ 27%] api/Bio.Entrez reading sources... [ 28%] api/Bio.Entrez.Parser reading sources... [ 28%] api/Bio.ExPASy reading sources... [ 28%] api/Bio.ExPASy.Enzyme reading sources... [ 29%] api/Bio.ExPASy.Prodoc reading sources... [ 29%] api/Bio.ExPASy.Prosite reading sources... [ 29%] api/Bio.ExPASy.ScanProsite reading sources... [ 30%] api/Bio.ExPASy.cellosaurus reading sources... [ 30%] api/Bio.File reading sources... [ 30%] api/Bio.GenBank reading sources... [ 31%] api/Bio.GenBank.Record reading sources... [ 31%] api/Bio.GenBank.Scanner reading sources... [ 31%] api/Bio.GenBank.utils reading sources... [ 31%] api/Bio.Geo reading sources... [ 32%] api/Bio.Geo.Record reading sources... [ 32%] api/Bio.Graphics reading sources... [ 32%] api/Bio.Graphics.BasicChromosome reading sources... [ 33%] api/Bio.Graphics.ColorSpiral reading sources... [ 33%] api/Bio.Graphics.Comparative reading sources... [ 33%] api/Bio.Graphics.DisplayRepresentation reading sources... [ 34%] api/Bio.Graphics.Distribution reading sources... [ 34%] api/Bio.Graphics.GenomeDiagram reading sources... [ 34%] api/Bio.Graphics.KGML_vis reading sources... [ 35%] api/Bio.HMM reading sources... [ 35%] api/Bio.HMM.DynamicProgramming /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/DynamicProgramming.py:18: BiopythonDeprecationWarning: The 'Bio.HMM.DynamicProgramming' module is deprecated and will be removed in a future release of Biopython. Consider using the hmmlearn package instead. warnings.warn( reading sources... [ 35%] api/Bio.HMM.MarkovModel /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/MarkovModel.py:19: BiopythonDeprecationWarning: The 'Bio.HMM.MarkovModule' module is deprecated and will be removed in a future release of Biopython. Consider using the hmmlearn package instead. warnings.warn( reading sources... [ 36%] api/Bio.HMM.Trainer /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/Trainer.py:30: BiopythonDeprecationWarning: The 'Bio.HMM.Trainer' module is deprecated and will be removed in a future release of Biopython. Consider using the hmmlearn package instead. warnings.warn( reading sources... [ 36%] api/Bio.HMM.Utilities /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/Utilities.py:18: BiopythonDeprecationWarning: The 'Bio.HMM.Utilities' module is deprecated and will be removed in a future release of Biopython. Consider using the hmmlearn package instead. warnings.warn( reading sources... [ 36%] api/Bio.KEGG reading sources... [ 37%] api/Bio.KEGG.Compound reading sources... [ 37%] api/Bio.KEGG.Enzyme reading sources... [ 37%] api/Bio.KEGG.Gene reading sources... [ 38%] api/Bio.KEGG.KGML reading sources... [ 38%] api/Bio.KEGG.KGML.KGML_parser reading sources... [ 38%] api/Bio.KEGG.KGML.KGML_pathway reading sources... [ 39%] api/Bio.KEGG.Map reading sources... [ 39%] api/Bio.KEGG.REST reading sources... [ 39%] api/Bio.LogisticRegression /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/LogisticRegression.py:26: BiopythonDeprecationWarning: The 'Bio.LogisticRegression' module is deprecated and will be removed in a future release of Biopython. Consider using scikit-learn instead. warnings.warn( reading sources... [ 40%] api/Bio.MarkovModel /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MarkovModel.py:29: BiopythonDeprecationWarning: The 'Bio.MarkovModel' module is deprecated and will be removed in a future release of Biopython. Consider using the hmmlearn package instead. warnings.warn( reading sources... [ 40%] api/Bio.MaxEntropy /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MaxEntropy.py:29: BiopythonDeprecationWarning: The 'Bio.MaxEntropy' module is deprecated and will be removed in a future release of Biopython. Consider using scikit-learn instead. warnings.warn( reading sources... [ 40%] api/Bio.Medline reading sources... [ 41%] api/Bio.NMR reading sources... [ 41%] api/Bio.NMR.NOEtools reading sources... [ 41%] api/Bio.NMR.xpktools reading sources... [ 42%] api/Bio.NaiveBayes /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NaiveBayes.py:35: BiopythonDeprecationWarning: The 'Bio.NaiveBayes' module is deprecated and will be removed in a future release of Biopython. Consider using scikit-learn instead. warnings.warn( reading sources... [ 42%] api/Bio.Nexus reading sources... [ 42%] api/Bio.Nexus.Nexus reading sources... [ 43%] api/Bio.Nexus.Nodes reading sources... [ 43%] api/Bio.Nexus.StandardData reading sources... [ 43%] api/Bio.Nexus.Trees reading sources... [ 44%] api/Bio.PDB reading sources... [ 44%] api/Bio.PDB.AbstractPropertyMap reading sources... [ 44%] api/Bio.PDB.Atom reading sources... [ 44%] api/Bio.PDB.Chain reading sources... [ 45%] api/Bio.PDB.DSSP reading sources... [ 45%] api/Bio.PDB.Dice reading sources... [ 45%] api/Bio.PDB.Entity reading sources... [ 46%] api/Bio.PDB.FragmentMapper reading sources... [ 46%] api/Bio.PDB.HSExposure reading sources... [ 46%] api/Bio.PDB.MMCIF2Dict reading sources... [ 47%] api/Bio.PDB.MMCIFParser reading sources... [ 47%] api/Bio.PDB.Model reading sources... [ 47%] api/Bio.PDB.NACCESS reading sources... [ 48%] api/Bio.PDB.NeighborSearch reading sources... [ 48%] api/Bio.PDB.PDBExceptions reading sources... [ 48%] api/Bio.PDB.PDBIO reading sources... [ 49%] api/Bio.PDB.PDBList reading sources... [ 49%] api/Bio.PDB.PDBMLParser reading sources... [ 49%] api/Bio.PDB.PDBParser reading sources... [ 50%] api/Bio.PDB.PICIO reading sources... [ 50%] api/Bio.PDB.PSEA reading sources... [ 50%] api/Bio.PDB.Polypeptide reading sources... [ 51%] api/Bio.PDB.Residue reading sources... [ 51%] api/Bio.PDB.ResidueDepth reading sources... [ 51%] api/Bio.PDB.SASA reading sources... [ 52%] api/Bio.PDB.SCADIO reading sources... [ 52%] api/Bio.PDB.Selection reading sources... [ 52%] api/Bio.PDB.Structure reading sources... [ 53%] api/Bio.PDB.StructureAlignment reading sources... [ 53%] api/Bio.PDB.StructureBuilder reading sources... [ 53%] api/Bio.PDB.Superimposer reading sources... [ 54%] api/Bio.PDB.alphafold_db reading sources... [ 54%] api/Bio.PDB.binary_cif reading sources... [ 54%] api/Bio.PDB.cealign reading sources... [ 55%] api/Bio.PDB.ic_data reading sources... [ 55%] api/Bio.PDB.ic_rebuild reading sources... [ 55%] api/Bio.PDB.internal_coords reading sources... [ 56%] api/Bio.PDB.mmcifio reading sources... [ 56%] api/Bio.PDB.mmtf reading sources... [ 56%] api/Bio.PDB.mmtf.DefaultParser reading sources... [ 56%] api/Bio.PDB.mmtf.mmtfio reading sources... [ 57%] api/Bio.PDB.parse_pdb_header reading sources... [ 57%] api/Bio.PDB.qcprot reading sources... [ 57%] api/Bio.PDB.vectors reading sources... [ 58%] api/Bio.Pathway reading sources... [ 58%] api/Bio.Pathway.Rep reading sources... [ 58%] api/Bio.Pathway.Rep.Graph reading sources... [ 59%] api/Bio.Pathway.Rep.MultiGraph reading sources... [ 59%] api/Bio.Phylo reading sources... [ 59%] api/Bio.Phylo.Applications reading sources... [ 60%] api/Bio.Phylo.BaseTree reading sources... [ 60%] api/Bio.Phylo.CDAO reading sources... [ 60%] api/Bio.Phylo.CDAOIO reading sources... [ 61%] api/Bio.Phylo.Consensus reading sources... [ 61%] api/Bio.Phylo.NeXML reading sources... [ 61%] api/Bio.Phylo.NeXMLIO reading sources... [ 62%] api/Bio.Phylo.Newick reading sources... [ 62%] api/Bio.Phylo.NewickIO reading sources... [ 62%] api/Bio.Phylo.NexusIO reading sources... [ 63%] api/Bio.Phylo.PAML reading sources... [ 63%] api/Bio.Phylo.PAML.baseml reading sources... [ 63%] api/Bio.Phylo.PAML.chi2 reading sources... [ 64%] api/Bio.Phylo.PAML.codeml reading sources... [ 64%] api/Bio.Phylo.PAML.yn00 reading sources... [ 64%] api/Bio.Phylo.PhyloXML reading sources... [ 65%] api/Bio.Phylo.PhyloXMLIO reading sources... [ 65%] api/Bio.Phylo.TreeConstruction reading sources... [ 65%] api/Bio.PopGen reading sources... [ 66%] api/Bio.PopGen.GenePop reading sources... [ 66%] api/Bio.PopGen.GenePop.Controller reading sources... [ 66%] api/Bio.PopGen.GenePop.EasyController reading sources... [ 67%] api/Bio.PopGen.GenePop.FileParser reading sources... [ 67%] api/Bio.PopGen.GenePop.LargeFileParser reading sources... [ 67%] api/Bio.Restriction reading sources... [ 68%] api/Bio.Restriction.PrintFormat reading sources... [ 68%] api/Bio.Restriction.Restriction_Dictionary reading sources... [ 68%] api/Bio.SCOP reading sources... [ 69%] api/Bio.SCOP.Cla reading sources... [ 69%] api/Bio.SCOP.Des reading sources... [ 69%] api/Bio.SCOP.Dom reading sources... [ 69%] api/Bio.SCOP.Hie reading sources... [ 70%] api/Bio.SCOP.Raf reading sources... [ 70%] api/Bio.SCOP.Residues reading sources... [ 70%] api/Bio.SVDSuperimposer reading sources... [ 71%] api/Bio.SearchIO reading sources... [ 71%] api/Bio.SearchIO.BlastIO reading sources... [ 71%] api/Bio.SearchIO.BlastIO.blast_tab reading sources... [ 72%] api/Bio.SearchIO.BlastIO.blast_xml reading sources... [ 72%] api/Bio.SearchIO.BlatIO reading sources... [ 72%] api/Bio.SearchIO.ExonerateIO reading sources... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_cigar reading sources... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_text reading sources... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_vulgar reading sources... [ 74%] api/Bio.SearchIO.FastaIO reading sources... [ 74%] api/Bio.SearchIO.HHsuiteIO reading sources... [ 74%] api/Bio.SearchIO.HHsuiteIO.hhsuite2_text reading sources... [ 75%] api/Bio.SearchIO.HmmerIO reading sources... [ 75%] api/Bio.SearchIO.HmmerIO.hmmer2_text reading sources... [ 75%] api/Bio.SearchIO.HmmerIO.hmmer3_domtab reading sources... [ 76%] api/Bio.SearchIO.HmmerIO.hmmer3_tab reading sources... [ 76%] api/Bio.SearchIO.HmmerIO.hmmer3_text reading sources... [ 76%] api/Bio.SearchIO.InterproscanIO reading sources... [ 77%] api/Bio.SearchIO.InterproscanIO.interproscan_xml reading sources... [ 77%] api/Bio.Seq reading sources... [ 77%] api/Bio.SeqFeature reading sources... [ 78%] api/Bio.SeqIO reading sources... [ 78%] api/Bio.SeqIO.AbiIO reading sources... [ 78%] api/Bio.SeqIO.AceIO reading sources... [ 79%] api/Bio.SeqIO.FastaIO reading sources... [ 79%] api/Bio.SeqIO.GckIO reading sources... [ 79%] api/Bio.SeqIO.GfaIO reading sources... [ 80%] api/Bio.SeqIO.IgIO reading sources... [ 80%] api/Bio.SeqIO.InsdcIO reading sources... [ 80%] api/Bio.SeqIO.Interfaces reading sources... [ 81%] api/Bio.SeqIO.NibIO reading sources... [ 81%] api/Bio.SeqIO.PdbIO reading sources... [ 81%] api/Bio.SeqIO.PhdIO reading sources... [ 81%] api/Bio.SeqIO.PirIO reading sources... [ 82%] api/Bio.SeqIO.QualityIO reading sources... [ 82%] api/Bio.SeqIO.SeqXmlIO reading sources... [ 82%] api/Bio.SeqIO.SffIO reading sources... [ 83%] api/Bio.SeqIO.SnapGeneIO reading sources... [ 83%] api/Bio.SeqIO.SwissIO reading sources... [ 83%] api/Bio.SeqIO.TabIO reading sources... [ 84%] api/Bio.SeqIO.TwoBitIO reading sources... [ 84%] api/Bio.SeqIO.UniprotIO reading sources... [ 84%] api/Bio.SeqIO.XdnaIO reading sources... [ 85%] api/Bio.SeqRecord reading sources... [ 85%] api/Bio.SeqUtils reading sources... [ 85%] api/Bio.SeqUtils.CheckSum reading sources... [ 86%] api/Bio.SeqUtils.IsoelectricPoint reading sources... [ 86%] api/Bio.SeqUtils.MeltingTemp reading sources... [ 86%] api/Bio.SeqUtils.ProtParam reading sources... [ 87%] api/Bio.SeqUtils.ProtParamData reading sources... [ 87%] api/Bio.SeqUtils.lcc reading sources... [ 87%] api/Bio.Sequencing reading sources... [ 88%] api/Bio.Sequencing.Ace reading sources... [ 88%] api/Bio.Sequencing.Applications reading sources... [ 88%] api/Bio.Sequencing.Phd reading sources... [ 89%] api/Bio.SwissProt reading sources... [ 89%] api/Bio.SwissProt.KeyWList reading sources... [ 89%] api/Bio.TogoWS reading sources... [ 90%] api/Bio.UniGene reading sources... [ 90%] api/Bio.UniProt reading sources... [ 90%] api/Bio.UniProt.GOA reading sources... [ 91%] api/Bio.bgzf reading sources... [ 91%] api/Bio.codonalign /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__init__.py:21: BiopythonExperimentalWarning: Bio.codonalign is an experimental module which may undergo significant changes prior to its future official release. warnings.warn( reading sources... [ 91%] api/Bio.codonalign.codonalignment reading sources... [ 92%] api/Bio.codonalign.codonseq reading sources... [ 92%] api/Bio.kNN /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/kNN.py:46: BiopythonDeprecationWarning: The 'Bio.kNN' module is deprecated and will be removed in a future release of Biopython. Consider using scikit-learn instead. warnings.warn( reading sources... [ 92%] api/Bio.motifs reading sources... [ 93%] api/Bio.motifs.alignace reading sources... [ 93%] api/Bio.motifs.applications reading sources... [ 93%] api/Bio.motifs.clusterbuster reading sources... [ 94%] api/Bio.motifs.jaspar reading sources... [ 94%] api/Bio.motifs.jaspar.db reading sources... [ 94%] api/Bio.motifs.mast reading sources... [ 94%] api/Bio.motifs.matrix reading sources... [ 95%] api/Bio.motifs.meme reading sources... [ 95%] api/Bio.motifs.minimal reading sources... [ 95%] api/Bio.motifs.pfm reading sources... [ 96%] api/Bio.motifs.thresholds reading sources... [ 96%] api/Bio.motifs.transfac reading sources... [ 96%] api/Bio.motifs.xms reading sources... [ 97%] api/Bio.pairwise2 /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. warnings.warn( reading sources... [ 97%] api/Bio.phenotype reading sources... [ 97%] api/Bio.phenotype.phen_micro reading sources... [ 98%] api/Bio.phenotype.pm_fitting reading sources... [ 98%] api/BioSQL reading sources... [ 98%] api/BioSQL.BioSeq reading sources... [ 99%] api/BioSQL.BioSeqDatabase reading sources... [ 99%] api/BioSQL.DBUtils reading sources... [ 99%] api/BioSQL.Loader reading sources... [100%] api/index reading sources... [100%] index looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done copying assets... copying static files... Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/documentation_options.js Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/basic.css Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/js/versions.js copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 0%] Tutorial/chapter_align writing output... [ 1%] Tutorial/chapter_appendix writing output... [ 1%] Tutorial/chapter_bibliography writing output... [ 1%] Tutorial/chapter_blast writing output... [ 2%] Tutorial/chapter_cluster writing output... [ 2%] Tutorial/chapter_contributing writing output... [ 2%] Tutorial/chapter_cookbook writing output... [ 3%] Tutorial/chapter_entrez writing output... [ 3%] Tutorial/chapter_graphics writing output... [ 3%] Tutorial/chapter_introduction writing output... [ 4%] Tutorial/chapter_kegg writing output... [ 4%] Tutorial/chapter_motifs writing output... [ 4%] Tutorial/chapter_msa writing output... [ 5%] Tutorial/chapter_pairwise writing output... [ 5%] Tutorial/chapter_pairwise2 writing output... [ 5%] Tutorial/chapter_pdb writing output... [ 6%] Tutorial/chapter_phenotype writing output... [ 6%] Tutorial/chapter_phylo writing output... [ 6%] Tutorial/chapter_popgen writing output... [ 6%] Tutorial/chapter_quick_start writing output... [ 7%] Tutorial/chapter_searchio writing output... [ 7%] Tutorial/chapter_seq_annot writing output... [ 7%] Tutorial/chapter_seq_objects writing output... [ 8%] Tutorial/chapter_seqio writing output... [ 8%] Tutorial/chapter_testing writing output... [ 8%] Tutorial/chapter_uniprot writing output... [ 9%] Tutorial/index writing output... [ 9%] api/Bio writing output... [ 9%] api/Bio.Affy writing output... [ 10%] api/Bio.Affy.CelFile writing output... [ 10%] api/Bio.Align writing output... [ 10%] api/Bio.Align.AlignInfo writing output... [ 11%] api/Bio.Align.Applications writing output... [ 11%] api/Bio.Align.a2m writing output... [ 11%] api/Bio.Align.analysis writing output... [ 12%] api/Bio.Align.bed writing output... [ 12%] api/Bio.Align.bigbed writing output... [ 12%] api/Bio.Align.bigmaf writing output... [ 13%] api/Bio.Align.bigpsl writing output... [ 13%] api/Bio.Align.chain writing output... [ 13%] api/Bio.Align.clustal writing output... [ 14%] api/Bio.Align.emboss writing output... [ 14%] api/Bio.Align.exonerate writing output... [ 14%] api/Bio.Align.fasta writing output... [ 15%] api/Bio.Align.hhr writing output... [ 15%] api/Bio.Align.interfaces writing output... [ 15%] api/Bio.Align.maf writing output... [ 16%] api/Bio.Align.mauve writing output... [ 16%] api/Bio.Align.msf writing output... [ 16%] api/Bio.Align.nexus writing output... [ 17%] api/Bio.Align.phylip writing output... [ 17%] api/Bio.Align.psl writing output... [ 17%] api/Bio.Align.sam writing output... [ 18%] api/Bio.Align.stockholm writing output... [ 18%] api/Bio.Align.substitution_matrices writing output... [ 18%] api/Bio.Align.tabular writing output... [ 19%] api/Bio.AlignIO writing output... [ 19%] api/Bio.AlignIO.ClustalIO writing output... [ 19%] api/Bio.AlignIO.EmbossIO writing output... [ 19%] api/Bio.AlignIO.FastaIO writing output... [ 20%] api/Bio.AlignIO.Interfaces writing output... [ 20%] api/Bio.AlignIO.MafIO writing output... [ 20%] api/Bio.AlignIO.MauveIO writing output... [ 21%] api/Bio.AlignIO.MsfIO writing output... [ 21%] api/Bio.AlignIO.NexusIO writing output... [ 21%] api/Bio.AlignIO.PhylipIO writing output... [ 22%] api/Bio.AlignIO.StockholmIO writing output... [ 22%] api/Bio.Application writing output... [ 22%] api/Bio.Blast writing output... [ 23%] api/Bio.Blast.Applications writing output... [ 23%] api/Bio.Blast.NCBIWWW writing output... [ 23%] api/Bio.Blast.NCBIXML writing output... [ 24%] api/Bio.CAPS writing output... [ 24%] api/Bio.Cluster writing output... [ 24%] api/Bio.Compass writing output... [ 25%] api/Bio.Data writing output... [ 25%] api/Bio.Data.CodonTable writing output... [ 25%] api/Bio.Data.IUPACData writing output... [ 26%] api/Bio.Data.PDBData writing output... [ 26%] api/Bio.Emboss writing output... [ 26%] api/Bio.Emboss.Applications writing output... [ 27%] api/Bio.Emboss.Primer3 writing output... [ 27%] api/Bio.Emboss.PrimerSearch writing output... [ 27%] api/Bio.Entrez writing output... [ 28%] api/Bio.Entrez.Parser writing output... [ 28%] api/Bio.ExPASy writing output... [ 28%] api/Bio.ExPASy.Enzyme writing output... [ 29%] api/Bio.ExPASy.Prodoc writing output... [ 29%] api/Bio.ExPASy.Prosite writing output... [ 29%] api/Bio.ExPASy.ScanProsite writing output... [ 30%] api/Bio.ExPASy.cellosaurus writing output... [ 30%] api/Bio.File writing output... [ 30%] api/Bio.GenBank writing output... [ 31%] api/Bio.GenBank.Record writing output... [ 31%] api/Bio.GenBank.Scanner writing output... [ 31%] api/Bio.GenBank.utils writing output... [ 31%] api/Bio.Geo writing output... [ 32%] api/Bio.Geo.Record writing output... [ 32%] api/Bio.Graphics writing output... [ 32%] api/Bio.Graphics.BasicChromosome writing output... [ 33%] api/Bio.Graphics.ColorSpiral writing output... [ 33%] api/Bio.Graphics.Comparative writing output... [ 33%] api/Bio.Graphics.DisplayRepresentation writing output... [ 34%] api/Bio.Graphics.Distribution writing output... [ 34%] api/Bio.Graphics.GenomeDiagram writing output... [ 34%] api/Bio.Graphics.KGML_vis writing output... [ 35%] api/Bio.HMM writing output... [ 35%] api/Bio.HMM.DynamicProgramming writing output... [ 35%] api/Bio.HMM.MarkovModel writing output... [ 36%] api/Bio.HMM.Trainer writing output... [ 36%] api/Bio.HMM.Utilities writing output... [ 36%] api/Bio.KEGG writing output... [ 37%] api/Bio.KEGG.Compound writing output... [ 37%] api/Bio.KEGG.Enzyme writing output... [ 37%] api/Bio.KEGG.Gene writing output... [ 38%] api/Bio.KEGG.KGML writing output... [ 38%] api/Bio.KEGG.KGML.KGML_parser writing output... [ 38%] api/Bio.KEGG.KGML.KGML_pathway writing output... [ 39%] api/Bio.KEGG.Map writing output... [ 39%] api/Bio.KEGG.REST writing output... [ 39%] api/Bio.LogisticRegression writing output... [ 40%] api/Bio.MarkovModel writing output... [ 40%] api/Bio.MaxEntropy writing output... [ 40%] api/Bio.Medline writing output... [ 41%] api/Bio.NMR writing output... [ 41%] api/Bio.NMR.NOEtools writing output... [ 41%] api/Bio.NMR.xpktools writing output... [ 42%] api/Bio.NaiveBayes writing output... [ 42%] api/Bio.Nexus writing output... [ 42%] api/Bio.Nexus.Nexus writing output... [ 43%] api/Bio.Nexus.Nodes writing output... [ 43%] api/Bio.Nexus.StandardData writing output... [ 43%] api/Bio.Nexus.Trees writing output... [ 44%] api/Bio.PDB writing output... [ 44%] api/Bio.PDB.AbstractPropertyMap writing output... [ 44%] api/Bio.PDB.Atom writing output... [ 44%] api/Bio.PDB.Chain writing output... [ 45%] api/Bio.PDB.DSSP writing output... [ 45%] api/Bio.PDB.Dice writing output... [ 45%] api/Bio.PDB.Entity writing output... [ 46%] api/Bio.PDB.FragmentMapper writing output... [ 46%] api/Bio.PDB.HSExposure writing output... [ 46%] api/Bio.PDB.MMCIF2Dict writing output... [ 47%] api/Bio.PDB.MMCIFParser writing output... [ 47%] api/Bio.PDB.Model writing output... [ 47%] api/Bio.PDB.NACCESS writing output... [ 48%] api/Bio.PDB.NeighborSearch writing output... [ 48%] api/Bio.PDB.PDBExceptions writing output... [ 48%] api/Bio.PDB.PDBIO writing output... [ 49%] api/Bio.PDB.PDBList writing output... [ 49%] api/Bio.PDB.PDBMLParser writing output... [ 49%] api/Bio.PDB.PDBParser writing output... [ 50%] api/Bio.PDB.PICIO writing output... [ 50%] api/Bio.PDB.PSEA writing output... [ 50%] api/Bio.PDB.Polypeptide writing output... [ 51%] api/Bio.PDB.Residue writing output... [ 51%] api/Bio.PDB.ResidueDepth writing output... [ 51%] api/Bio.PDB.SASA writing output... [ 52%] api/Bio.PDB.SCADIO writing output... [ 52%] api/Bio.PDB.Selection writing output... [ 52%] api/Bio.PDB.Structure writing output... [ 53%] api/Bio.PDB.StructureAlignment writing output... [ 53%] api/Bio.PDB.StructureBuilder writing output... [ 53%] api/Bio.PDB.Superimposer writing output... [ 54%] api/Bio.PDB.alphafold_db writing output... [ 54%] api/Bio.PDB.binary_cif writing output... [ 54%] api/Bio.PDB.cealign writing output... [ 55%] api/Bio.PDB.ic_data writing output... [ 55%] api/Bio.PDB.ic_rebuild writing output... [ 55%] api/Bio.PDB.internal_coords writing output... [ 56%] api/Bio.PDB.mmcifio writing output... [ 56%] api/Bio.PDB.mmtf writing output... [ 56%] api/Bio.PDB.mmtf.DefaultParser writing output... [ 56%] api/Bio.PDB.mmtf.mmtfio writing output... [ 57%] api/Bio.PDB.parse_pdb_header writing output... [ 57%] api/Bio.PDB.qcprot writing output... [ 57%] api/Bio.PDB.vectors writing output... [ 58%] api/Bio.Pathway writing output... [ 58%] api/Bio.Pathway.Rep writing output... [ 58%] api/Bio.Pathway.Rep.Graph writing output... [ 59%] api/Bio.Pathway.Rep.MultiGraph writing output... [ 59%] api/Bio.Phylo writing output... [ 59%] api/Bio.Phylo.Applications writing output... [ 60%] api/Bio.Phylo.BaseTree writing output... [ 60%] api/Bio.Phylo.CDAO writing output... [ 60%] api/Bio.Phylo.CDAOIO writing output... [ 61%] api/Bio.Phylo.Consensus writing output... [ 61%] api/Bio.Phylo.NeXML writing output... [ 61%] api/Bio.Phylo.NeXMLIO writing output... [ 62%] api/Bio.Phylo.Newick writing output... [ 62%] api/Bio.Phylo.NewickIO writing output... [ 62%] api/Bio.Phylo.NexusIO writing output... [ 63%] api/Bio.Phylo.PAML writing output... [ 63%] api/Bio.Phylo.PAML.baseml writing output... [ 63%] api/Bio.Phylo.PAML.chi2 writing output... [ 64%] api/Bio.Phylo.PAML.codeml writing output... [ 64%] api/Bio.Phylo.PAML.yn00 writing output... [ 64%] api/Bio.Phylo.PhyloXML writing output... [ 65%] api/Bio.Phylo.PhyloXMLIO writing output... [ 65%] api/Bio.Phylo.TreeConstruction writing output... [ 65%] api/Bio.PopGen writing output... [ 66%] api/Bio.PopGen.GenePop writing output... [ 66%] api/Bio.PopGen.GenePop.Controller writing output... [ 66%] api/Bio.PopGen.GenePop.EasyController writing output... [ 67%] api/Bio.PopGen.GenePop.FileParser writing output... [ 67%] api/Bio.PopGen.GenePop.LargeFileParser writing output... [ 67%] api/Bio.Restriction writing output... [ 68%] api/Bio.Restriction.PrintFormat writing output... [ 68%] api/Bio.Restriction.Restriction_Dictionary writing output... [ 68%] api/Bio.SCOP writing output... [ 69%] api/Bio.SCOP.Cla writing output... [ 69%] api/Bio.SCOP.Des writing output... [ 69%] api/Bio.SCOP.Dom writing output... [ 69%] api/Bio.SCOP.Hie writing output... [ 70%] api/Bio.SCOP.Raf writing output... [ 70%] api/Bio.SCOP.Residues writing output... [ 70%] api/Bio.SVDSuperimposer writing output... [ 71%] api/Bio.SearchIO writing output... [ 71%] api/Bio.SearchIO.BlastIO writing output... [ 71%] api/Bio.SearchIO.BlastIO.blast_tab writing output... [ 72%] api/Bio.SearchIO.BlastIO.blast_xml writing output... [ 72%] api/Bio.SearchIO.BlatIO writing output... [ 72%] api/Bio.SearchIO.ExonerateIO writing output... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_cigar writing output... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_text writing output... [ 73%] api/Bio.SearchIO.ExonerateIO.exonerate_vulgar writing output... [ 74%] api/Bio.SearchIO.FastaIO writing output... [ 74%] api/Bio.SearchIO.HHsuiteIO writing output... [ 74%] api/Bio.SearchIO.HHsuiteIO.hhsuite2_text writing output... [ 75%] api/Bio.SearchIO.HmmerIO writing output... [ 75%] api/Bio.SearchIO.HmmerIO.hmmer2_text writing output... [ 75%] api/Bio.SearchIO.HmmerIO.hmmer3_domtab writing output... [ 76%] api/Bio.SearchIO.HmmerIO.hmmer3_tab writing output... [ 76%] api/Bio.SearchIO.HmmerIO.hmmer3_text writing output... [ 76%] api/Bio.SearchIO.InterproscanIO writing output... [ 77%] api/Bio.SearchIO.InterproscanIO.interproscan_xml writing output... [ 77%] api/Bio.Seq writing output... [ 77%] api/Bio.SeqFeature writing output... [ 78%] api/Bio.SeqIO writing output... [ 78%] api/Bio.SeqIO.AbiIO writing output... [ 78%] api/Bio.SeqIO.AceIO writing output... [ 79%] api/Bio.SeqIO.FastaIO writing output... [ 79%] api/Bio.SeqIO.GckIO writing output... [ 79%] api/Bio.SeqIO.GfaIO writing output... [ 80%] api/Bio.SeqIO.IgIO writing output... [ 80%] api/Bio.SeqIO.InsdcIO writing output... [ 80%] api/Bio.SeqIO.Interfaces writing output... [ 81%] api/Bio.SeqIO.NibIO writing output... [ 81%] api/Bio.SeqIO.PdbIO writing output... [ 81%] api/Bio.SeqIO.PhdIO writing output... [ 81%] api/Bio.SeqIO.PirIO writing output... [ 82%] api/Bio.SeqIO.QualityIO writing output... [ 82%] api/Bio.SeqIO.SeqXmlIO writing output... [ 82%] api/Bio.SeqIO.SffIO writing output... [ 83%] api/Bio.SeqIO.SnapGeneIO writing output... [ 83%] api/Bio.SeqIO.SwissIO writing output... [ 83%] api/Bio.SeqIO.TabIO writing output... [ 84%] api/Bio.SeqIO.TwoBitIO writing output... [ 84%] api/Bio.SeqIO.UniprotIO writing output... [ 84%] api/Bio.SeqIO.XdnaIO writing output... [ 85%] api/Bio.SeqRecord writing output... [ 85%] api/Bio.SeqUtils writing output... [ 85%] api/Bio.SeqUtils.CheckSum writing output... [ 86%] api/Bio.SeqUtils.IsoelectricPoint writing output... [ 86%] api/Bio.SeqUtils.MeltingTemp writing output... [ 86%] api/Bio.SeqUtils.ProtParam writing output... [ 87%] api/Bio.SeqUtils.ProtParamData writing output... [ 87%] api/Bio.SeqUtils.lcc writing output... [ 87%] api/Bio.Sequencing writing output... [ 88%] api/Bio.Sequencing.Ace writing output... [ 88%] api/Bio.Sequencing.Applications writing output... [ 88%] api/Bio.Sequencing.Phd writing output... [ 89%] api/Bio.SwissProt writing output... [ 89%] api/Bio.SwissProt.KeyWList writing output... [ 89%] api/Bio.TogoWS writing output... [ 90%] api/Bio.UniGene writing output... [ 90%] api/Bio.UniProt writing output... [ 90%] api/Bio.UniProt.GOA writing output... [ 91%] api/Bio.bgzf writing output... [ 91%] api/Bio.codonalign writing output... [ 91%] api/Bio.codonalign.codonalignment writing output... [ 92%] api/Bio.codonalign.codonseq writing output... [ 92%] api/Bio.kNN writing output... [ 92%] api/Bio.motifs writing output... [ 93%] api/Bio.motifs.alignace writing output... [ 93%] api/Bio.motifs.applications writing output... [ 93%] api/Bio.motifs.clusterbuster writing output... [ 94%] api/Bio.motifs.jaspar writing output... [ 94%] api/Bio.motifs.jaspar.db writing output... [ 94%] api/Bio.motifs.mast writing output... [ 94%] api/Bio.motifs.matrix writing output... [ 95%] api/Bio.motifs.meme writing output... 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The HTML pages are in _build/html. make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc' make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' set -e \ ; for avoid in \ PAML_tools EmbossPhylipNew \ MSAProbs_tool PopGen_GenePop PopGen_GenePop_EasyController XXmotif_tool PDB_ResidueDepth mmtf mmtf_online GraphicsBitmaps \ raxml_tool \ BioSQL_MySQLdb BioSQL_psycopg2 \ ; do mkdir -p Tests_avoid \ ; mv Tests/test_${avoid}.py Tests_avoid \ ; done # For the doc package we need a clean testsuite without all the # remaining files. So keep a clean copy here mkdir -p debian/tmp_tests cp -a Tests debian/tmp_tests # remove duplicated file rm -f debian/tmp_tests/Tests/Quality/example.fastq.gz # Prepare resources necessary to dssp. mkdir -pv /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data mkdir: created directory '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data' cp -v /usr/share/libcifpp/mmcif_pdbx.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data '/usr/share/libcifpp/mmcif_pdbx.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_pdbx.dic' cp -v /usr/share/libcifpp/mmcif_ma.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data '/usr/share/libcifpp/mmcif_ma.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_ma.dic' cp -v debian/tests/mini-ccd.cif /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif 'debian/tests/mini-ccd.cif' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif' # We also keep the tests we need to avoid for later inspection test ! -d Tests_avoid || cp -a Tests_avoid debian/tmp_tests # in the Debian package dialign it is not needed to set # DIALIGN2_DIR but the test is verifying this dir to run the # EMBOSS test test_Emboss also requires to have the environment # variable EMBOSS_ROOT set LC_ALL=C.UTF-8 \ dh_auto_test -- \ --test \ --system=custom \ --test-args=' \ set -e; \ mkdir -p {build_dir}/home; \ mkdir -p {build_dir}/Doc/examples; \ cp -a Doc/Tutorial {build_dir}/Doc; \ cp -a Doc/examples {build_dir}/Doc; \ cp -a Tests {build_dir}; \ cd {build_dir}/Tests; \ env DIALIGN2_DIR=/usr/share/dialign \ EMBOSS_ROOT=/usr/lib/emboss \ HOME={build_dir}/home \ {interpreter} run_tests.py --offline' pybuild --test -i python{version} -p 3.13 --test --system=custom "--test-args= \\\ set -e; \\\ mkdir -p {build_dir}/home; \\\ mkdir -p {build_dir}/Doc/examples; \\\ cp -a Doc/Tutorial {build_dir}/Doc; \\\ cp -a Doc/examples {build_dir}/Doc; \\\ cp -a Tests {build_dir}; \\\ cd {build_dir}/Tests; \\\ env DIALIGN2_DIR=/usr/share/dialign \\\ EMBOSS_ROOT=/usr/lib/emboss \\\ HOME={build_dir}/home \\\ {interpreter} run_tests.py --offline" I: pybuild base:311: \ set -e; \ mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home; \ mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples; \ cp -a Doc/Tutorial /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \ cp -a Doc/examples /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \ cp -a Tests /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build; \ cd /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests; \ env DIALIGN2_DIR=/usr/share/dialign \ EMBOSS_ROOT=/usr/lib/emboss \ HOME=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home \ python3.13 run_tests.py --offline test_Ace ... ok test_Affy ... ok test_AlignIO ... ok test_AlignIO_ClustalIO ... ok test_AlignIO_EmbossIO ... ok test_AlignIO_FastaIO ... ok test_AlignIO_MauveIO ... ok test_AlignIO_PhylipIO ... ok test_AlignIO_convert ... ok test_AlignInfo ... ok test_Align_Alignment ... ok test_Align_a2m ... ok test_Align_bed ... ok test_Align_bigbed ... ok test_Align_bigmaf ... ok test_Align_bigpsl ... ok test_Align_chain ... ok test_Align_clustal ... ok test_Align_codonalign ... ok test_Align_emboss ... ok test_Align_exonerate ... ok test_Align_fasta ... ok test_Align_hhr ... ok test_Align_maf ... ok test_Align_mauve ... ok test_Align_msf ... ok test_Align_nexus ... ok test_Align_phylip ... ok test_Align_psl ... ok test_Align_sam ... ok test_Align_stockholm ... ok test_Align_tabular ... ok test_Application ... ok test_BWA_tool ... ok test_BioSQL_MySQLdb_online ... skipping. internet not available test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) test_BioSQL_mysql_connector_online ... skipping. internet not available test_BioSQL_psycopg2_online ... skipping. internet not available test_BioSQL_sqlite3 ... ok test_BioSQL_sqlite3_online ... skipping. internet not available test_Blast_Record ... ok test_Blast_parser ... ok test_CAPS ... ok test_Chi2 ... ok test_ClustalOmega_tool ... ok test_Clustalw_tool ... skipping. Install clustalw or clustalw2 if you want to use it from Biopython. test_Cluster ... ok test_CodonTable ... ok test_ColorSpiral ... ok test_Compass ... ok test_Consensus ... ok test_Dialign_tool ... ok test_EMBL_unittest ... ok test_Emboss ... skipping. $EMBOSS_ROOT='/usr/lib/emboss' which does not exist! test_EmbossPrimer ... ok test_Entrez ... ok test_Entrez_online ... skipping. internet not available test_Entrez_parser ... ok test_Enzyme ... ok test_ExPASy ... skipping. internet not available test_Fasttree_tool ... ok test_File ... ok test_GenBank ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/InsdcIO.py:600: BiopythonWarning: Annotation 'Sequence Read Archive: SRX001885, SRX001121, SRX001531, SRX001530, SRX001529' too long warnings.warn(f"Annotation {text!r} too long", BiopythonWarning) ok test_GenomeDiagram ... Warn: Can't find .pfb for face 'Helvetica' ok test_GraphicsChromosome ... ok test_GraphicsDistribution ... ok test_GraphicsGeneral ... ok test_HMMCasino ... ok test_HMMGeneral ... ok test_KEGG ... ok test_KEGG_online ... skipping. internet not available test_KGML_graphics ... ok test_KGML_graphics_online ... skipping. internet not available test_KGML_nographics ... ok test_KeyWList ... ok test_LogisticRegression ... ok test_MafIO_index ... ok test_Mafft_tool ... ok test_MarkovModel ... ok test_Medline ... ok test_Muscle_tool ... ok test_NCBIXML ... Exception ignored in: Traceback (most recent call last): File "/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/NCBIXML.py", line 1319, in parse expat_parser.Parse(NULL, True) xml.parsers.expat.ExpatError: unclosed token: line 320, column 0 ok test_NCBI_BLAST_tools ... ok test_NCBI_qblast ... ok test_NMR ... ok test_NaiveBayes ... ok test_Nexus ... ok test_PAML_baseml ... ok test_PAML_codeml ... ok test_PAML_yn00 ... ok test_PDB_CEAligner ... ok test_PDB_DSSP ... ok test_PDB_Dice ... ok test_PDB_Disordered ... ok test_PDB_Exposure ... ok test_PDB_FragmentMapper ... ok test_PDB_KDTree ... ok test_PDB_MMCIF2Dict ... ok test_PDB_MMCIFIO ... ok test_PDB_MMCIFParser ... ok test_PDB_NACCESS ... ok test_PDB_PDBIO ... ok test_PDB_PDBList ... skipping. internet not available test_PDB_PDBMLParser ... ok test_PDB_PDBParser ... ok test_PDB_PSEA ... skipping. Download and install psea from ftp://ftp.lmcp.jussieu.fr/pub/sincris/software/protein/p-sea/. Make sure that psea is on path test_PDB_Polypeptide ... ok test_PDB_QCPSuperimposer ... ok test_PDB_SASA ... ok test_PDB_SMCRA ... ok test_PDB_Selection ... ok test_PDB_StructureAlignment ... ok test_PDB_Superimposer ... ok test_PDB_alphafold_db ... skipping. internet not available test_PDB_binary_cif ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 7. warnings.warn( /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 144. warnings.warn( /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 153. warnings.warn( /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 0. warnings.warn( /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 0. warnings.warn( ok test_PDB_internal_coords ... ok test_PDB_parse_pdb_header ... ok test_PDB_vectors ... ok test_PQR ... ok test_Pathway ... ok test_Phd ... ok test_Phylo ... ok test_PhyloXML ... ok test_Phylo_CDAO ... ok test_Phylo_NeXML ... ok test_Phylo_igraph ... ok test_Phylo_matplotlib ... ok test_Phylo_networkx ... ok test_PopGen_GenePop_nodepend ... ok test_Prank_tool ... ok test_Probcons_tool ... ok test_ProtParam ... ok test_RCSBFormats ... ok test_Restriction ... ok test_SCOP_Astral ... ok test_SCOP_Cla ... ok test_SCOP_Des ... ok test_SCOP_Dom ... ok test_SCOP_Hie ... ok test_SCOP_Raf ... ok test_SCOP_Residues ... ok test_SCOP_Scop ... ok test_SVDSuperimposer ... ok test_SearchIO_blast_tab ... ok test_SearchIO_blast_tab_index ... ok test_SearchIO_blast_xml ... ok test_SearchIO_blast_xml_index ... ok test_SearchIO_blat_psl ... ok test_SearchIO_blat_psl_index ... ok test_SearchIO_exonerate ... ok test_SearchIO_exonerate_text_index ... ok test_SearchIO_exonerate_vulgar_index ... ok test_SearchIO_fasta_m10 ... ok test_SearchIO_fasta_m10_index ... ok test_SearchIO_hhsuite2_text ... ok test_SearchIO_hmmer2_text ... ok test_SearchIO_hmmer2_text_index ... ok test_SearchIO_hmmer3_domtab ... ok test_SearchIO_hmmer3_domtab_index ... ok test_SearchIO_hmmer3_tab ... ok test_SearchIO_hmmer3_tab_index ... ok test_SearchIO_hmmer3_text ... ok test_SearchIO_hmmer3_text_index ... ok test_SearchIO_interproscan_xml ... ok test_SearchIO_model ... ok test_SearchIO_write ... ok test_SeqFeature ... ok test_SeqIO ... ok test_SeqIO_AbiIO ... ok test_SeqIO_FastaIO ... ok test_SeqIO_Gck ... ok test_SeqIO_Gfa ... ok test_SeqIO_Insdc ... ok test_SeqIO_NibIO ... ok test_SeqIO_PdbIO ... ok test_SeqIO_QualityIO ... ok test_SeqIO_SeqXML ... ok test_SeqIO_SffIO ... ok test_SeqIO_SnapGene ... ok test_SeqIO_TwoBitIO ... ok test_SeqIO_UniprotIO ... ok test_SeqIO_Xdna ... ok test_SeqIO_features ... ok test_SeqIO_index ... ok test_SeqIO_online ... skipping. internet not available test_SeqIO_write ... ok test_SeqRecord ... ok test_SeqUtils ... ok test_Seq_objs ... ok test_SwissProt ... ok test_TCoffee_tool ... ok test_TogoWS ... skipping. internet not available test_TreeConstruction ... ok test_Tutorial ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py:3969: BiopythonWarning: One or more gap scores are greater than mismatch score. Algorithm may return incorrect results. score, paths = super().align(sA, sB, strand) ok test_UniGene ... ok test_UniProt ... skipping. internet not available test_UniProt_GOA ... ok test_align ... ok test_align_substitution_matrices ... ok test_bgzf ... ok test_cellosaurus ... ok test_codonalign ... ok test_geo ... ok test_kNN ... ok test_motifs ... ok test_motifs_online ... skipping. internet not available test_pairwise2 ... ok test_pairwise2_no_C ... ok test_pairwise_aligner ... ok test_pairwise_alignment_map ... ok test_phenotype ... ok test_phenotype_fit ... ok test_phyml_tool ... skipping. Couldn't find the PhyML software. Install PhyML 3.0 or later if you want to use the Bio.Phylo.Applications wrapper. test_prodoc ... ok test_prosite ... ok test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython test_seq ... ok test_translate ... ok Bio docstring test ... ok Bio.Affy docstring test ... ok Bio.Affy.CelFile docstring test ... ok Bio.Align docstring test ... ok Bio.Align.AlignInfo docstring test ... ok Bio.Align.Applications docstring test ... ok Bio.Align.Applications._ClustalOmega docstring test ... ok Bio.Align.Applications._Clustalw docstring test ... ok Bio.Align.Applications._Dialign docstring test ... ok Bio.Align.Applications._MSAProbs docstring test ... ok Bio.Align.Applications._Mafft docstring test ... ok Bio.Align.Applications._Muscle docstring test ... ok Bio.Align.Applications._Prank docstring test ... ok Bio.Align.Applications._Probcons docstring test ... ok Bio.Align.Applications._TCoffee docstring test ... ok Bio.Align._aligncore docstring test ... ok Bio.Align._codonaligner docstring test ... ok Bio.Align._pairwisealigner docstring test ... ok Bio.Align.a2m docstring test ... ok Bio.Align.analysis docstring test ... ok Bio.Align.bed docstring test ... ok Bio.Align.bigbed docstring test ... ok Bio.Align.bigmaf docstring test ... ok Bio.Align.bigpsl docstring test ... ok Bio.Align.chain docstring test ... ok Bio.Align.clustal docstring test ... ok Bio.Align.emboss docstring test ... ok Bio.Align.exonerate docstring test ... ok Bio.Align.fasta docstring test ... ok Bio.Align.hhr docstring test ... ok Bio.Align.interfaces docstring test ... ok Bio.Align.maf docstring test ... ok Bio.Align.mauve docstring test ... ok Bio.Align.msf docstring test ... ok Bio.Align.nexus docstring test ... ok Bio.Align.phylip docstring test ... ok Bio.Align.psl docstring test ... ok Bio.Align.sam docstring test ... ok Bio.Align.stockholm docstring test ... ok Bio.Align.substitution_matrices docstring test ... ok Bio.Align.tabular docstring test ... ok Bio.AlignIO docstring test ... ok Bio.AlignIO.ClustalIO docstring test ... ok Bio.AlignIO.EmbossIO docstring test ... ok Bio.AlignIO.FastaIO docstring test ... ok Bio.AlignIO.Interfaces docstring test ... ok Bio.AlignIO.MafIO docstring test ... ok Bio.AlignIO.MauveIO docstring test ... ok Bio.AlignIO.MsfIO docstring test ... ok Bio.AlignIO.NexusIO docstring test ... ok Bio.AlignIO.PhylipIO docstring test ... ok Bio.AlignIO.StockholmIO docstring test ... ok Bio.Application docstring test ... ok Bio.Blast docstring test ... ok Bio.Blast.Applications docstring test ... ok Bio.Blast.NCBIWWW docstring test ... ok Bio.Blast.NCBIXML docstring test ... ok Bio.Blast._parser docstring test ... ok Bio.Blast._writers docstring test ... ok Bio.CAPS docstring test ... ok Bio.Cluster docstring test ... ok Bio.Cluster._cluster docstring test ... ok Bio.Compass docstring test ... ok Bio.Data docstring test ... ok Bio.Data.CodonTable docstring test ... ok Bio.Data.IUPACData docstring test ... ok Bio.Data.PDBData docstring test ... ok Bio.Emboss docstring test ... ok Bio.Emboss.Applications docstring test ... ok Bio.Emboss.Primer3 docstring test ... ok Bio.Emboss.PrimerSearch docstring test ... ok Bio.Entrez.Parser docstring test ... ok Bio.ExPASy.Enzyme docstring test ... ok Bio.ExPASy.Prodoc docstring test ... ok Bio.ExPASy.Prosite docstring test ... ok Bio.ExPASy.ScanProsite docstring test ... ok Bio.File docstring test ... ok Bio.GenBank docstring test ... ok Bio.GenBank.Record docstring test ... ok Bio.GenBank.Scanner docstring test ... ok Bio.GenBank.utils docstring test ... ok Bio.Geo docstring test ... ok Bio.Geo.Record docstring test ... ok Bio.Graphics docstring test ... ok Bio.Graphics.BasicChromosome docstring test ... ok Bio.Graphics.ColorSpiral docstring test ... ok Bio.Graphics.Comparative docstring test ... ok Bio.Graphics.DisplayRepresentation docstring test ... ok Bio.Graphics.Distribution docstring test ... ok Bio.Graphics.GenomeDiagram docstring test ... ok Bio.Graphics.GenomeDiagram._AbstractDrawer docstring test ... ok Bio.Graphics.GenomeDiagram._CircularDrawer docstring test ... ok Bio.Graphics.GenomeDiagram._Colors docstring test ... ok Bio.Graphics.GenomeDiagram._CrossLink docstring test ... ok Bio.Graphics.GenomeDiagram._Diagram docstring test ... ok Bio.Graphics.GenomeDiagram._Feature docstring test ... ok Bio.Graphics.GenomeDiagram._FeatureSet docstring test ... ok Bio.Graphics.GenomeDiagram._Graph docstring test ... ok Bio.Graphics.GenomeDiagram._GraphSet docstring test ... ok Bio.Graphics.GenomeDiagram._LinearDrawer docstring test ... ok Bio.Graphics.GenomeDiagram._Track docstring test ... ok Bio.Graphics.KGML_vis docstring test ... ok Bio.HMM docstring test ... ok Bio.HMM.DynamicProgramming docstring test ... ok Bio.HMM.MarkovModel docstring test ... ok Bio.HMM.Trainer docstring test ... ok Bio.HMM.Utilities docstring test ... ok Bio.KEGG docstring test ... ok Bio.KEGG.Compound docstring test ... ok Bio.KEGG.Enzyme docstring test ... ok Bio.KEGG.Gene docstring test ... ok Bio.KEGG.KGML docstring test ... ok Bio.KEGG.KGML.KGML_parser docstring test ... ok Bio.KEGG.KGML.KGML_pathway docstring test ... ok Bio.KEGG.Map docstring test ... ok Bio.KEGG.REST docstring test ... ok Bio.LogisticRegression docstring test ... ok Bio.MarkovModel docstring test ... ok Bio.MaxEntropy docstring test ... ok Bio.Medline docstring test ... ok Bio.NMR docstring test ... ok Bio.NMR.NOEtools docstring test ... ok Bio.NMR.xpktools docstring test ... ok Bio.NaiveBayes docstring test ... ok Bio.Nexus docstring test ... ok Bio.Nexus.Nexus docstring test ... ok Bio.Nexus.Nodes docstring test ... ok Bio.Nexus.StandardData docstring test ... ok Bio.Nexus.Trees docstring test ... ok Bio.Nexus.cnexus docstring test ... ok Bio.PDB docstring test ... ok Bio.PDB.AbstractPropertyMap docstring test ... ok Bio.PDB.Atom docstring test ... ok Bio.PDB.Chain docstring test ... ok Bio.PDB.DSSP docstring test ... ok Bio.PDB.Dice docstring test ... ok Bio.PDB.Entity docstring test ... ok Bio.PDB.FragmentMapper docstring test ... ok Bio.PDB.HSExposure docstring test ... ok Bio.PDB.MMCIF2Dict docstring test ... ok Bio.PDB.MMCIFParser docstring test ... ok Bio.PDB.Model docstring test ... ok Bio.PDB.NACCESS docstring test ... ok Bio.PDB.NeighborSearch docstring test ... ok Bio.PDB.PDBExceptions docstring test ... ok Bio.PDB.PDBIO docstring test ... ok Bio.PDB.PDBList docstring test ... ok Bio.PDB.PDBMLParser docstring test ... ok Bio.PDB.PDBParser docstring test ... ok Bio.PDB.PICIO docstring test ... ok Bio.PDB.PSEA docstring test ... ok Bio.PDB.Polypeptide docstring test ... ok Bio.PDB.Residue docstring test ... ok Bio.PDB.ResidueDepth docstring test ... ok Bio.PDB.SASA docstring test ... ok Bio.PDB.SCADIO docstring test ... ok Bio.PDB.Selection docstring test ... ok Bio.PDB.Structure docstring test ... ok Bio.PDB.StructureAlignment docstring test ... ok Bio.PDB.StructureBuilder docstring test ... ok Bio.PDB.Superimposer docstring test ... ok Bio.PDB._bcif_helper docstring test ... ok Bio.PDB.alphafold_db docstring test ... ok Bio.PDB.binary_cif docstring test ... ok Bio.PDB.ccealign docstring test ... ok Bio.PDB.cealign docstring test ... ok Bio.PDB.ic_data docstring test ... ok Bio.PDB.ic_rebuild docstring test ... ok Bio.PDB.internal_coords docstring test ... ok Bio.PDB.kdtrees docstring test ... ok Bio.PDB.mmcifio docstring test ... ok Bio.PDB.mmtf docstring test ... ok Bio.PDB.mmtf.DefaultParser docstring test ... ok Bio.PDB.mmtf.mmtfio docstring test ... ok Bio.PDB.parse_pdb_header docstring test ... ok Bio.PDB.qcprot docstring test ... ok Bio.PDB.vectors docstring test ... ok Bio.Pathway docstring test ... ok Bio.Pathway.Rep docstring test ... ok Bio.Pathway.Rep.Graph docstring test ... ok Bio.Pathway.Rep.MultiGraph docstring test ... ok Bio.Phylo docstring test ... ok Bio.Phylo.Applications docstring test ... ok Bio.Phylo.Applications._Fasttree docstring test ... ok Bio.Phylo.Applications._Phyml docstring test ... ok Bio.Phylo.Applications._Raxml docstring test ... ok Bio.Phylo.BaseTree docstring test ... ok Bio.Phylo.CDAO docstring test ... ok Bio.Phylo.CDAOIO docstring test ... ok Bio.Phylo.Consensus docstring test ... ok Bio.Phylo.NeXML docstring test ... ok Bio.Phylo.NeXMLIO docstring test ... ok Bio.Phylo.Newick docstring test ... ok Bio.Phylo.NewickIO docstring test ... ok Bio.Phylo.NexusIO docstring test ... ok Bio.Phylo.PAML docstring test ... ok Bio.Phylo.PAML._paml docstring test ... ok Bio.Phylo.PAML._parse_baseml docstring test ... ok Bio.Phylo.PAML._parse_codeml docstring test ... ok Bio.Phylo.PAML._parse_yn00 docstring test ... ok Bio.Phylo.PAML.baseml docstring test ... ok Bio.Phylo.PAML.chi2 docstring test ... ok Bio.Phylo.PAML.codeml docstring test ... ok Bio.Phylo.PAML.yn00 docstring test ... ok Bio.Phylo.PhyloXML docstring test ... ok Bio.Phylo.PhyloXMLIO docstring test ... ok Bio.Phylo.TreeConstruction docstring test ... ok Bio.Phylo._cdao_owl docstring test ... ok Bio.Phylo._io docstring test ... ok Bio.Phylo._utils docstring test ... ok Bio.PopGen docstring test ... ok Bio.PopGen.GenePop docstring test ... ok Bio.PopGen.GenePop.Controller docstring test ... ok Bio.PopGen.GenePop.EasyController docstring test ... ok Bio.PopGen.GenePop.FileParser docstring test ... ok Bio.PopGen.GenePop.LargeFileParser docstring test ... ok Bio.Restriction docstring test ... ok Bio.Restriction.PrintFormat docstring test ... ok Bio.Restriction.Restriction docstring test ... ok Bio.Restriction.Restriction_Dictionary docstring test ... ok Bio.SCOP docstring test ... ok Bio.SCOP.Cla docstring test ... ok Bio.SCOP.Des docstring test ... ok Bio.SCOP.Dom docstring test ... ok Bio.SCOP.Hie docstring test ... ok Bio.SCOP.Raf docstring test ... ok Bio.SCOP.Residues docstring test ... ok Bio.SVDSuperimposer docstring test ... ok Bio.SearchIO docstring test ... ok Bio.SearchIO.BlastIO docstring test ... ok Bio.SearchIO.BlastIO.blast_tab docstring test ... ok Bio.SearchIO.BlastIO.blast_xml docstring test ... ok Bio.SearchIO.BlatIO docstring test ... ok Bio.SearchIO.ExonerateIO docstring test ... ok Bio.SearchIO.ExonerateIO._base docstring test ... ok Bio.SearchIO.ExonerateIO.exonerate_cigar docstring test ... ok Bio.SearchIO.ExonerateIO.exonerate_text docstring test ... ok Bio.SearchIO.ExonerateIO.exonerate_vulgar docstring test ... ok Bio.SearchIO.FastaIO docstring test ... ok Bio.SearchIO.HHsuiteIO docstring test ... ok Bio.SearchIO.HHsuiteIO.hhsuite2_text docstring test ... ok Bio.SearchIO.HmmerIO docstring test ... ok Bio.SearchIO.HmmerIO._base docstring test ... ok Bio.SearchIO.HmmerIO.hmmer2_text docstring test ... ok Bio.SearchIO.HmmerIO.hmmer3_domtab docstring test ... ok Bio.SearchIO.HmmerIO.hmmer3_tab docstring test ... ok Bio.SearchIO.HmmerIO.hmmer3_text docstring test ... ok Bio.SearchIO.InterproscanIO docstring test ... ok Bio.SearchIO.InterproscanIO.interproscan_xml docstring test ... ok Bio.SearchIO._index docstring test ... ok Bio.SearchIO._model docstring test ... ok Bio.SearchIO._model._base docstring test ... ok Bio.SearchIO._model.hit docstring test ... ok Bio.SearchIO._model.hsp docstring test ... ok Bio.SearchIO._model.query docstring test ... ok Bio.SearchIO._utils docstring test ... ok Bio.Seq docstring test ... ok Bio.SeqFeature docstring test ... ok Bio.SeqIO docstring test ... ok Bio.SeqIO.AbiIO docstring test ... ok Bio.SeqIO.AceIO docstring test ... ok Bio.SeqIO.FastaIO docstring test ... ok Bio.SeqIO.GckIO docstring test ... ok Bio.SeqIO.GfaIO docstring test ... ok Bio.SeqIO.IgIO docstring test ... ok Bio.SeqIO.InsdcIO docstring test ... ok Bio.SeqIO.Interfaces docstring test ... ok Bio.SeqIO.NibIO docstring test ... ok Bio.SeqIO.PdbIO docstring test ... ok Bio.SeqIO.PhdIO docstring test ... ok Bio.SeqIO.PirIO docstring test ... ok Bio.SeqIO.QualityIO docstring test ... ok Bio.SeqIO.SeqXmlIO docstring test ... ok Bio.SeqIO.SffIO docstring test ... ok Bio.SeqIO.SnapGeneIO docstring test ... ok Bio.SeqIO.SwissIO docstring test ... ok Bio.SeqIO.TabIO docstring test ... ok Bio.SeqIO.TwoBitIO docstring test ... ok Bio.SeqIO.UniprotIO docstring test ... ok Bio.SeqIO.XdnaIO docstring test ... ok Bio.SeqIO._index docstring test ... ok Bio.SeqIO._twoBitIO docstring test ... ok Bio.SeqRecord docstring test ... ok Bio.SeqUtils docstring test ... ok Bio.SeqUtils.CheckSum docstring test ... ok Bio.SeqUtils.IsoelectricPoint docstring test ... ok Bio.SeqUtils.MeltingTemp docstring test ... ok Bio.SeqUtils.ProtParam docstring test ... ok Bio.SeqUtils.ProtParamData docstring test ... ok Bio.SeqUtils.lcc docstring test ... ok Bio.Sequencing docstring test ... ok Bio.Sequencing.Ace docstring test ... ok Bio.Sequencing.Applications docstring test ... ok Bio.Sequencing.Applications._Novoalign docstring test ... ok Bio.Sequencing.Applications._bwa docstring test ... ok Bio.Sequencing.Applications._samtools docstring test ... ok Bio.Sequencing.Phd docstring test ... ok Bio.SwissProt docstring test ... ok Bio.SwissProt.KeyWList docstring test ... ok Bio.UniGene docstring test ... ok Bio.UniProt.GOA docstring test ... ok Bio._utils docstring test ... ok Bio.bgzf docstring test ... ok Bio.codonalign docstring test ... ok Bio.codonalign.codonalignment docstring test ... ok Bio.codonalign.codonseq docstring test ... ok Bio.cpairwise2 docstring test ... ok Bio.kNN docstring test ... ok Bio.motifs docstring test ... ok Bio.motifs._pwm docstring test ... ok Bio.motifs.alignace docstring test ... ok Bio.motifs.applications docstring test ... ok Bio.motifs.applications._xxmotif docstring test ... ok Bio.motifs.clusterbuster docstring test ... ok Bio.motifs.jaspar docstring test ... ok Bio.motifs.jaspar.db docstring test ... ok Bio.motifs.mast docstring test ... ok Bio.motifs.matrix docstring test ... ok Bio.motifs.meme docstring test ... ok Bio.motifs.minimal docstring test ... ok Bio.motifs.pfm docstring test ... ok Bio.motifs.thresholds docstring test ... ok Bio.motifs.transfac docstring test ... ok Bio.motifs.xms docstring test ... ok Bio.pairwise2 docstring test ... ok Bio.phenotype docstring test ... ok Bio.phenotype.phen_micro docstring test ... ok Bio.phenotype.pm_fitting docstring test ... ok BioSQL docstring test ... ok BioSQL.BioSeq docstring test ... ok BioSQL.BioSeqDatabase docstring test ... ok BioSQL.DBUtils docstring test ... ok BioSQL.Loader docstring test ... ok ---------------------------------------------------------------------- Ran 551 tests in 847.944 seconds Skipping any tests requiring internet access Python version: 3.13.3 (main, Apr 10 2025, 21:38:51) [GCC 14.2.0] Operating system: posix linux rm -fr -- /tmp/dh-xdg-rundir-szNQ7J1w # Cleanup steps after tests. set -e \ ; if [ -d Tests_avoid ] \ ; then mv Tests_avoid/* Tests \ ; rmdir Tests_avoid \ ; fi rm -r /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars rm -fr -- debian/.debhelper/generated/python3-biopython/ debian/python3-biopython/ debian/tmp/ debian/.debhelper/generated/python-biopython-doc/ debian/python-biopython-doc/ debian/.debhelper/generated/python3-biopython-sql/ debian/python3-biopython-sql/ rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_auto_install install -m0755 -d /build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'Doc/_build' warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution adding license file 'LICENSE' adding license file 'LICENSE.rst' writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are already explicitly excluding 'Bio.Align.substitution_matrices.data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.DTDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.DTDs' to be distributed and are already explicitly excluding 'Bio.Entrez.DTDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.XSDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.XSDs' to be distributed and are already explicitly excluding 'Bio.Entrez.XSDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) running build_ext running install_lib creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.cache creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.cache/matplotlib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home/.cache/matplotlib/fontlist-v390.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.cache/matplotlib creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee/plugins creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee/plugins/linux creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee/cache creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee/methods creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.t_coffee/mcoffee creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/biopython creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/biopython/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/biopython/Bio/Entrez creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/biopython/Bio/Entrez/XSDs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/biopython/Bio/Entrez/DTDs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/home/.config/matplotlib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/tree1.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/Applications.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/NCBIXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/_writers.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/NCBIWWW.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__pycache__/_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/NCBIWWW.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/_writers.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/Scanner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/__pycache__/Record.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/__pycache__/utils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/__pycache__/Scanner.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank/utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/Restriction_Dictionary.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__pycache__/Restriction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__pycache__/Restriction_Dictionary.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__pycache__/PrintFormat.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/Restriction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/PrintFormat.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/cluster.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/cluster.h -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/clustermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/Prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/cellosaurus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/Prodoc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/Prosite.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/Enzyme.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/ScanProsite.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/Prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/ScanProsite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy/Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__pycache__/codonseq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__pycache__/codonalignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/codonseq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/codonalignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/cpairwise2module.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo/__pycache__/Record.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/NOEtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/xpktools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/__pycache__/xpktools.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/__pycache__/NOEtools.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/PDBData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/IUPACData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/clusterbuster.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/mast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/_pwm.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/alignace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/xms.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/minimal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/thresholds.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/mast.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/alignace.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/xms.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/minimal.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/clusterbuster.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/matrix.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/pfm.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/transfac.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/meme.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__pycache__/thresholds.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/transfac.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications/__pycache__/_xxmotif.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications/_xxmotif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/matrix.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/pfm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar/__pycache__/db.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar/db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/meme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/MeltingTemp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/lcc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/IsoelectricPoint.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/ProtParam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/ProtParamData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/lcc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/MeltingTemp.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/CheckSum.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/ProtParamData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/IsoelectricPoint.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/CheckSum.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/bgzf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/LogisticRegression.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/_utils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/pairwise2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/Seq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/MaxEntropy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/File.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/SeqRecord.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/NaiveBayes.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/kNN.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/SeqFeature.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__pycache__/MarkovModel.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__pycache__ creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__pycache__/Nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__pycache__/StandardData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__pycache__/Nodes.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__pycache__/Trees.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/Trees.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/Nodes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/StandardData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/cnexus.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/Nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/NeXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/BaseTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/NewickIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/CDAOIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Newick.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/NeXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/_utils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/NexusIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/CDAOIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/PhyloXMLIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/CDAO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/Newick.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/NewickIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/_io.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/PhyloXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/Consensus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/BaseTree.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/_cdao_owl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/NeXMLIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__pycache__/TreeConstruction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/_paml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/_parse_codeml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/baseml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/_parse_baseml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/chi2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/yn00.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/_paml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/_parse_yn00.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__pycache__/codeml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/_parse_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/_parse_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/_parse_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML/chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PhyloXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/_io.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/__pycache__/_Raxml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/__pycache__/_Phyml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/__pycache__/_Fasttree.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/_Fasttree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/_Raxml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications/_Phyml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/_cdao_owl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/MultiGraph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/__pycache__/Graph.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/__pycache__/MultiGraph.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway/Rep/Graph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/EasyController.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__pycache__/FileParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__pycache__/EasyController.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__pycache__/LargeFileParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__pycache__/Controller.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/Controller.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/LargeFileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/FileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/__pycache__/Ace.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/__pycache__/Phd.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/__pycache__/_bwa.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/__pycache__/_Novoalign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/__pycache__/_samtools.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/_samtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/_bwa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications/_Novoalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Phd.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/__pycache__/Applications.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/__pycache__/Primer3.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/__pycache__/PrimerSearch.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/Primer3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/PrimerSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SVDSuperimposer creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SVDSuperimposer/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SVDSuperimposer creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/TabIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PhdIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/GfaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/InsdcIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/NibIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/Interfaces.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SnapGeneIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/QualityIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/AceIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/GfaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SffIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/IgIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/InsdcIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PhdIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SwissIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/TwoBitIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PdbIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/TabIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/GckIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PirIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SeqXmlIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/UniprotIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/XdnaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PirIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SwissIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/AceIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SnapGeneIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SeqXmlIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/IgIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Hie.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Dom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Residues.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Dom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Des.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Hie.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Raf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__pycache__/Cla.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Residues.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Raf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/Cla.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/File.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/__pycache__/Parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__pycache__ creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/XSDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/XSDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs/IPGReportSet.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/XSDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/XSDs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-section1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/EMBL_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pmc-1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/chars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/default-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/htmltable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isopub.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsb.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsa.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esearch.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomscr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/SP_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/journalmeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-models.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-references1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/format.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/backmatter.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/common.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mmlextra.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/phrase.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsc.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivearticle.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_190101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamso.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/einfo.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/OMSSA.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isolat1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-chars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/notat.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/elink_020122.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary_clinvar.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/list.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk4.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary_gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Project.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsn.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isonum.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/link.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PDB_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/display.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/epost.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-notat1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NSE.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/articlemeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/default-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/elink.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NSE.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eLink_090910.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/section.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/references.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-list1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isodia.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eLink_101123.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mmlalias.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-math1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isolat2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSpell.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-format1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isobox.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/GenBank_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/egquery.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/Parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MaxEntropy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy/__pycache__/CelFile.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy/CelFile.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Alphabet copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Alphabet copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/ClustalIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/Interfaces.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/PhylipIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/NexusIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/StockholmIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/MauveIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/MafIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/EmbossIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__pycache__/MsfIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/MafIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/StockholmIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/MsfIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/DynamicProgramming.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__pycache__/Utilities.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__pycache__/DynamicProgramming.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__pycache__/Trainer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__pycache__/MarkovModel.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/Trainer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/Utilities.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/Distribution.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/ColorSpiral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_Colors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_GraphSet.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_AbstractDrawer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_Graph.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_Colors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_CrossLink.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_Feature.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_Track.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_Diagram.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_LinearDrawer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_CircularDrawer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__pycache__/_FeatureSet.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_Feature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_Track.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_Graph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_Diagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/KGML_vis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/Distribution.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/DisplayRepresentation.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/Comparative.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/ColorSpiral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/BasicChromosome.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__pycache__/KGML_vis.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/DisplayRepresentation.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/BasicChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/Comparative.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__pycache__/_utils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__pycache__/_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__pycache__/BlatIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__pycache__ creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/__pycache__/blast_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/__pycache__/blast_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO/blast_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO/__pycache__/interproscan_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO/__pycache__/hhsuite2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_cigar.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__pycache__/exonerate_vulgar.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__pycache__/_base.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlatIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__pycache__/hsp.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__pycache__/hit.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__pycache__/query.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__pycache__/_base.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/hit.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/query.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/hsp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer3_domtab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/_base.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__pycache__/hmmer2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt/__pycache__/KeyWList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt/KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/cpairwise2.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_aligncore.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/interfaces.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/clustal.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/bed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/fasta.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/emboss.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/analysis.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/tabular.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/bigbed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/hhr.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/mauve.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/bigpsl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/bigmaf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/msf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/maf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/sam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/AlignInfo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/phylip.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/stockholm.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__pycache__/a2m.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_MSAProbs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Muscle.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Prank.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Dialign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_MSAProbs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Clustalw.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_TCoffee.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_ClustalOmega.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Mafft.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Probcons.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_ClustalOmega.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Muscle.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/HOXD70 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/STR -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/TRANS -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Map creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Map/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Map/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Map/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Map/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Map creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/__pycache__/REST.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/__pycache__ creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/KGML_pathway.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/KGML_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/__pycache__/KGML_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/__pycache__/KGML_pathway.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/REST.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Enzyme creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Enzyme/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Enzyme/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Enzyme/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Enzyme/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Enzyme creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Gene creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Gene/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Gene/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Gene/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Gene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Gene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Compound creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Compound/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Compound/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Compound/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Compound/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Compound creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/internal_coords.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Entity.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/MMCIFParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/__pycache__/mmtfio.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/__pycache__/DefaultParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/DefaultParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/mmtfio.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Selection.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/SCADIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/FragmentMapper.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/parse_pdb_header.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmcifio.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/bcifhelpermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/qcprot.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PICIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/SCADIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/NACCESS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PDBParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/binary_cif.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/HSExposure.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/DSSP.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Entity.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/vectors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/MMCIFParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PSEA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PDBExceptions.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/cealign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/qcprot.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PDBIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/internal_coords.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Dice.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/mmcifio.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/StructureBuilder.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/ic_data.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Structure.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Superimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Selection.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Atom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/AbstractPropertyMap.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/ic_rebuild.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/SASA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/alphafold_db.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Model.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/StructureAlignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/FragmentMapper.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PDBList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/ResidueDepth.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Polypeptide.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/MMCIF2Dict.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PICIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/PDBMLParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/parse_pdb_header.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Residue.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/NeighborSearch.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/AbstractPropertyMap.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/NACCESS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ic_data.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Model.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/DSSP.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Atom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Residue.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/MMCIF2Dict.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/NeighborSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/HSExposure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ccealignmodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Superimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ResidueDepth.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/vectors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/binary_cif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/cealign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ic_rebuild.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Structure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBExceptions.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Polypeptide.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Medline/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Medline/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt/__pycache__/GOA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt/GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/TogoWS creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/TogoWS/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/TogoWS/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/TogoWS creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniGene creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniGene/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniGene/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniGene creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/__pycache__/phen_micro.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/__pycache__/pm_fitting.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/phen_micro.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/pm_fitting.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/phenotype/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/tree1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastn_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_008.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_011.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_pcr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastx_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/html_msgid_29_blastx_001.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_012.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_007.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.tab -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_005.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_009.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/phiblast.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_orchid.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_004.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_006.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_003.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_010.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_wait.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/megablast_legacy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_actin.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_013.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_006.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_result.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_disco.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_002.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_empty.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_matplotlib.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Prank_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PopGen_GenePop_nodepend.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_features.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_networkx.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_feature_qualifier.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.ffn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/iro.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_accession.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/wrong_sequence_indent.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_end_marker.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/1MRR_A.gp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NP_416719.gbwithparts -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_structured_comment.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NT_019265.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tls_KDHP01000000.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/origin_line.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/blank_seq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/dbsource_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/GU949562.1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_product.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pBAD30.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EZ116220.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_read.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/arab1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tsa_acropora.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pri1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/one_of.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_write.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq2.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref_date_warning.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_origin_no_end.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.tsv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/DS830848.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/gbvrl1_start.seq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_fuzzy.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_loc_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_misc_feature.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_version.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/extra_keywords.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-11664-sequence-180430.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-39296-sequence-49545.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/negative_location.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_FragmentMapper.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_internal_coords.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Residues.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_sqlite3_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Hie.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/sweetpea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output009.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rosemary.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output001.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/elderberry.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/wisteria.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/flowers.pro.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/centaurea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output008.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output005.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lavender.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lupine.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/loveliesbleeding.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/fa01 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output004.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output003.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output012.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/dups.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output016.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/phlox.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output015.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output002.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output006.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_blast.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output007.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f003.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_no_wrap.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output013.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output010.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output014.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rose.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/tc_out.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_pearson.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output011.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phenotype.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_QCPSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SMCRA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniProt_GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_KDTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/cac81.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/cac81.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_EMBL_unittest.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cluster/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cluster/cyano.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example_nonstandardannotations.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/simple.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/cath3.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/globins45.ali -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam7.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam9.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam8.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam1.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam6.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/funny.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/cath2.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/cath1.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam1.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_count.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/redAltAADistrib.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/aaDistrib.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/acc_rep_mat.pik -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/redAADistrib.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_freq.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_convert.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/patents.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/A04195.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/Human_contigs.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/SC10H5.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited2.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/TRBG361.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/embl_with_0_line.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/kipo_prt_sample.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AE017046.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/101ma_no_coords.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AAA03323.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DS830848.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/hla_3260_sample.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/U87107.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/location_wrap.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/RepBase23.02.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/xx_after_co.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/epo_prt_selection.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Restriction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CAPS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/adh.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_pro.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_nucl.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro1.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl4.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro2.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro3.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro4.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro5.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/drosophila.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenBank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Xdna.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM700.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSE16.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_dual.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_series.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_family.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM645.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_platform.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy_chp.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM691.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM804.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBI_BLAST_tools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ClustalOmega_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CodonUsage copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CodonUsage copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_vectors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_454 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_solexa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Selection.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phenotype_fit.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NMR/out_example.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NMR/noed.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/neighbor_trees.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/adam_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/consensus_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/strict_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/test.log -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/upgma.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj_min.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/trees.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/msa.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/pars3.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/majority_ref.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_nographics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PQR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/alignace.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourrows.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/Arnt.sites -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test_rna.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.adh.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourcolumns.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.adh.de.oops.html.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.INO_up800.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/SRF.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.psp_test.classic.zoops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/REB1.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.farntrans5.classic.anr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/transfac.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/abdb.xms -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.adh.de.oops.html.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/MA0056.1.transfac -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/wrong_version.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/length_coords_mismatch.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/invalid.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/unfinished.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/humor.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/corrupt.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bigMaf.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bug2453.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/cnksr3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_alignment_map.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/.coveragerc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KEGG_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SnapGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/five.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/three.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/six.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/four.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/two.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/hennigian.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/random.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/one.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhsearch_q9bsu1_uniclust_w_ss_pfamA_30.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4p79_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_emptytable.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_onlyheader.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/7rbx_A_hhsearch_trunc.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4y9h_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/allx.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhsearch.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhpred_9590198.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align_substitution_matrices.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Application.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/greek.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/paired.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff_rel_paths.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gck.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Clustalw_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gfa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phyml_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/tmpdirprankmsap84OP8 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_MafIO_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMCasino.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/B_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMA_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/Cw_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMB_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/clustalw.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_CDAO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Pathway.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prosite.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_tab_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_StructureAlignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_features.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsChromosome.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_yn00.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PopGen_GenePop_nodepend.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Cla.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Restriction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise_aligner.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_graphics_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_EmbossIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Cluster.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_a2m.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_nographics.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TCoffee_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_MySQLdb_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigmaf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_phenotype_fit.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_PhylipIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Muscle_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KeyWList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TogoWS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Insdc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hhsuite2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Enzyme.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_PdbIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqRecord.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SffIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_UniGene.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Gfa.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_NeXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NaiveBayes.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_alphafold_db.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NMR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_internal_coords.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBI_BLAST_tools.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CAPS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SMCRA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Dialign_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigbed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_model.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_UniProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_igraph.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_psycopg2_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_EmbossPrimer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phd.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_mysql_connector.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_tabular.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigpsl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_baseml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Superimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBIXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ColorSpiral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_interproscan_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignInfo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_KDTree.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Consensus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_mauve.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_codeml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_UniProt_GOA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsDistribution.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_File.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Hie.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_emboss.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/search_tests_common.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Mafft_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_UniprotIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_TwoBitIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Dom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_EMBL_unittest.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIF2Dict.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_seq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_write.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_exonerate_vulgar_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_graphics.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GenBank.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_fasta.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_codonalign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_write.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/pairwise2_testCases.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Selection.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Fasttree_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_translate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_msf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Scop.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_Record.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_MafIO_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_convert.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_binary_cif.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_QCPSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIFParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_clustal.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Tutorial.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_cellosaurus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Polypeptide.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align_substitution_matrices.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_samtools_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMCasino.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_MarkovModel.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Clustalw_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_networkx.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise2_no_C.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/requires_internet.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Emboss.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqUtils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Gck.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PhyloXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Medline.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Dice.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/seq_tests_common.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_Alignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_geo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_xml_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_hhr.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_codonalign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Ace.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Chi2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_vectors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise_alignment_map.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_LogisticRegression.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Compass.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Astral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prodoc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SnapGene.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_NACCESS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_DSSP.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_kNN.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_stockholm.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer2_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_tab_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PSEA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_RCSBFormats.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Probcons_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Disordered.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GenomeDiagram.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ClustalOmega_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_QualityIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PQR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_phenotype.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqFeature.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_phylip.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Affy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_FragmentMapper.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Des.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Application.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Xdna.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TreeConstruction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_sam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_maf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Exposure.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_matplotlib.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ExPASy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_MauveIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIFIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Residues.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_parse_pdb_header.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Seq_objs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_mysql_connector_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Prank_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SVDSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBI_qblast.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_ClustalIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_phyml_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SwissProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBMLParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Raf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_bgzf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SASA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_NibIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_CEAligner.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ProtParam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BWA_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SeqXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_exonerate_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__ creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/test.new -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/test_Nexus_input.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/codonposset.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/int_node_labels.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/bats.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SeqXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/FSSP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/FSSP/1cnv.fssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/FSSP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Polypeptide.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CDAO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/CDAO/test.cdao -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CDAO copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Dialign_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo3.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo2.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/big.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c3space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2line.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c3line.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/equCab1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/canFam2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/mm9.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple_short.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Astral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TogoWS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_File.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NMR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_nobrief_multiple.pair -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse4.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_pair.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/short.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/no_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/internal_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_simple.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_asis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.psearch -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK_full.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_overhang.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_reverse.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_forward.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/alignret.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_translate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ExPASy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Compass.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Gck copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Gck/artificial.gck -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Gck copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_motifs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_igraph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbed_extended.littleendian.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/CAG33136.1.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.cds -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg19ToHg38.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_005.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.over.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/fasta_34.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rheMac8ToRheMac10.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/mm10ToMm39.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bedExample2.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rn6ToRn7.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/est.panTro5.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/est.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/balAcu1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/mirna.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbed_extended.bigendian.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_003.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_004.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/calJac3ToCalJac4.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Cluster.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam2_sorted.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/sam2.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_header.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam1.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_refresh.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam2.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/readme.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam1_sorted.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/sam1.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_header.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_psycopg2_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SVDSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_Alignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SwissProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeuralNetwork/repeat.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeuralNetwork/enolase.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_xml_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_geo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.hie.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/testDom.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.cla.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.des.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/raftest.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TCoffee_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/gen_results.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/bad.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees.4.6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednames.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/aa_alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednum.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/longnames.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model6.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model8.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model7.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model5.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dottednum.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dotted.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/bad_results.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_SE.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3 creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0 creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dottednum-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dotted-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00 copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ColorSpiral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_tag_type.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/seq.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_segment_fields.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/fake_gfa2.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/fake_with_checksum.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_tag_name.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/no_seq.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_checksum.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_len.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/seq_with_len.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/seq_tests_common.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta2.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta9.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary9.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed3.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_schemas.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/espell.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/protein.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/biosample.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/ncbi_mim.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/taxonomy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_pmc.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/journals.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenomeDiagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/output.best.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Exposure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-c.xprt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-a.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-b.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_samtools_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIFParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Dom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lactate.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lipoprotein.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/proline.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/valine.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Raf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Pathway.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_write.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KEGG.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Tutorial.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_none.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_cigar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cigar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/common_BioSQL.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/InterProScan copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/InterProScan/test_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/InterProScan copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBI_qblast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Affy/affy_v4_example.CEL -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Affy/affy_v3_example.CEL -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Muscle_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/protein_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/global_species_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/dna_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/version_01_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/rna_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00159.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00107.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00488.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00546.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00432.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00165.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00933.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00787.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00144.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00100.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00149.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00340.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00640.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00113.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00424.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00472.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsDistribution.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_sqlite3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hhsuite2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/requires_internet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIF2Dict.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/search_tests_common.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/ExtendedPhylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/ExtendedPhylip/primates.phyx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/ExtendedPhylip copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Seq_objs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/EDD_RAT.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/seqs.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/bt001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Scop.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.long.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.bigendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.littleendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.appveyor -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/run_tests.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-d.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-f.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-e.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/pFA-KanMX4.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Probcons_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/common_BioSQL_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_DSSP.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Disordered.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/bcl_2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/distribution.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/apaf.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/phyloxml_examples.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/made_up.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PQR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PQR/1A80.pqr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PQR copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Cla.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.eps -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_original.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/random_organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/square_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_colors.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/multi_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_7.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/simple_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_original.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/spiral_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_1.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_widths.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_motifs_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/pairwise2_testCases.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_long_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_unit_sep.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_93.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_tabs.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_double_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/tricky.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_del.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_vtab.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_diff_ids.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_double_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_short_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_escape.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/zero_length.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_spaces.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_no_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_null.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_space.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_tab.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_title.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Mafft_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Saf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Saf/saf1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Saf creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/edgelabels.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/nexml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/treebase-record.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/timetree.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/tolweb.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees-uris.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/characters.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_types.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/sets.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/phenoscape.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P68308.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp015 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0CK95.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O95832.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.list -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60137.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp013 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q7Z739.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O23729.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P16235.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P39896.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni003 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0A186.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60904.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P04439.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp012 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13454.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp016 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/UniRef90_P99999.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P84001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.gff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.rdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/R5HY77.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P62258.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P97881.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2_no_C.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_MySQLdb_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_RCSBFormats.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/contig1.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/consed_sample.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/seq.cap.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_model.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_aligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/tmpdirprankmsahlvFPr creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/calJac4.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.chrom.sizes -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/mm39.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rheMac10.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rn7.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_binary_cif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Insdc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BWA_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/hedgehog.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/promals3d.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/protein.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/opuntia.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/odd_consensus.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/temp horses.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Fasttree_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Medline.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_NACCESS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map00950.rea -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00253.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/gene.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00010.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/compound.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map03070.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko01100.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/compound.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko03070.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map01100.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.4letter -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.new -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIFIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/msf/W_prot.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/msf/DOA_prot.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Compass copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Compass/comtest1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Compass copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Compass/comtest2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Compass copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/output.best.fas -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6wg6.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WQA.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Wilke_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Sander_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1AS5.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1MOM_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A7G.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.asa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/disordered.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4Q9R_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/header.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/lib_10_z_5.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN_aligned.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7DDO.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1gbt.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/d256ba_.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/ions.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/alignment_file.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/occupancy.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Ahmad_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2OFG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/dssp_xtra_Sander.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3jqh.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2n0n_M1.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Miller_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.xyzr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG_noheader.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.rsa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_parse_pdb_header.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Superimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFF/NC_001802x.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFF/NC_001802.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFF/multi.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFF/NC_001422.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFF/NC_001802lc.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFF creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_008.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_009.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_010.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_006.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_011.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_007.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_human_sample.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_yeast.gaf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_yeast.gpa.59.gpa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gp_information.goa_yeast.28.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gene_association.goa_yeast.1.gaf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/cor6_6.db -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-pg.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-sqlite.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-mysql.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniGene/Hs.2.data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniGene/Mdm_partial.data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniGene/Eca.1.2425.data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Affy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_write.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/test.fsa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/fake.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/nonascii_encoding.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/empty.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/310.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/3100.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/no_smpl1.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/A6_1-DB3.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/3730.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/test_data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_CEAligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_EmbossPrimer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/SmallPlate_2.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/SmallPlates.csv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/SmallPlate.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/BadPlate.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/Plates.csv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/Plate_2.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/Plate.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phd.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/Loader.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeqDatabase.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/DBUtils.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__ copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_contributing.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_motifs.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phylo.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_uniprot.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_graphics.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_bibliography.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_blast.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_quick_start.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pdb.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_align.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/index.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_searchio.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_kegg.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_appendix.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_cluster.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seq_objects.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_cookbook.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_msa.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_entrez.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phenotype.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seqio.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seq_annot.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pairwise.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_testing.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_popgen.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_introduction.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pairwise2.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/simple.dnd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/fasta_dictionary.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ACT_example.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/beta.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/PF05371_seed.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ec_5.4.2.2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/clustal_run.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/opuntia.dnd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/opuntia.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/alpha.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/my_blat.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/fasta_iterator.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/my_blast.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bz2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/Plates.csv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/opuntia.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/www_blast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/Proux_et_al_2002_Figure_6.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/swissprot.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/m_cold.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/nmr/simplepredict.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/nmr/noed.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/NCBIXML.py to NCBIXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/Applications.py to Applications.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/_parser.py to _parser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/_writers.py to _writers.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Blast/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/Scanner.py to Scanner.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/Record.py to Record.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/GenBank/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/Restriction.py to Restriction.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/PrintFormat.py to PrintFormat.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Cluster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/kNN.py to kNN.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/codonseq.py to codonseq.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/codonalignment.py to codonalignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/codonalign/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo/Record.py to Record.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Geo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Seq.py to Seq.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/xpktools.py to xpktools.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/PDBData.py to PDBData.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/IUPACData.py to IUPACData.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/CodonTable.py to CodonTable.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/clusterbuster.py to clusterbuster.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/mast.py to mast.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/alignace.py to alignace.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/xms.py to xms.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/minimal.py to minimal.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/thresholds.py to thresholds.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/transfac.py to transfac.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/matrix.py to matrix.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/pfm.py to pfm.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar/db.py to db.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/jaspar/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/motifs/meme.py to meme.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/lcc.py to lcc.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/CheckSum.py to CheckSum.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/ProtParam.py to ProtParam.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/Trees.py to Trees.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/Nodes.py to Nodes.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/StandardData.py to StandardData.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Nexus/Nexus.py to Nexus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAO.py to CDAO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Newick.py to Newick.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXML.py to NeXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_utils.py to _utils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Consensus.py to Consensus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_io.py to _io.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Pathway/Rep/Graph.py to Graph.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/bgzf.py to bgzf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/Controller.py to Controller.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Ace.py to Ace.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Phd.py to Phd.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Applications.py to Applications.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Primer3.py to Primer3.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SVDSuperimposer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/QualityIO.py to QualityIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/TabIO.py to TabIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/PhdIO.py to PhdIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/SffIO.py to SffIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/TwoBitIO.py to TwoBitIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/GfaIO.py to GfaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/Interfaces.py to Interfaces.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/XdnaIO.py to XdnaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/PirIO.py to PirIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/SwissIO.py to SwissIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/GckIO.py to GckIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/PdbIO.py to PdbIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/_index.py to _index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/AceIO.py to AceIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/NibIO.py to NibIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/SnapGeneIO.py to SnapGeneIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/AbiIO.py to AbiIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/IgIO.py to IgIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/FastaIO.py to FastaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/_utils.py to _utils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Hie.py to Hie.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Dom.py to Dom.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Des.py to Des.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Residues.py to Residues.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Raf.py to Raf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Cla.py to Cla.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/File.py to File.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/Parser.py to Parser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/MaxEntropy.py to MaxEntropy.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqRecord.py to SeqRecord.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Affy/CelFile.py to CelFile.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Alphabet/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/Interfaces.py to Interfaces.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/MafIO.py to MafIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/NexusIO.py to NexusIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/MauveIO.py to MauveIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/MsfIO.py to MsfIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/AlignIO/FastaIO.py to FastaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/pairwise2.py to pairwise2.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Trainer.py to Trainer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Utilities.py to Utilities.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/Distribution.py to Distribution.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/KGML_vis.py to KGML_vis.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/Comparative.py to Comparative.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_utils.py to _utils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py to hhsuite2_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_index.py to _index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hit.py to hit.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/query.py to query.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/_base.py to _base.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/maf.py to maf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/exonerate.py to exonerate.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/fasta.py to fasta.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/emboss.py to emboss.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/chain.py to chain.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/msf.py to msf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/bigmaf.py to bigmaf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/bigbed.py to bigbed.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/clustal.py to clustal.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/phylip.py to phylip.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/bed.py to bed.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/interfaces.py to interfaces.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/analysis.py to analysis.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/hhr.py to hhr.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/AlignInfo.py to AlignInfo.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/psl.py to psl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/tabular.py to tabular.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/mauve.py to mauve.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/sam.py to sam.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/nexus.py to nexus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Probcons.py to _Probcons.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Mafft.py to _Mafft.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Dialign.py to _Dialign.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Prank.py to _Prank.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Muscle.py to _Muscle.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/stockholm.py to stockholm.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/a2m.py to a2m.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/bigpsl.py to bigpsl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Map/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/KGML/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/REST.py to REST.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Enzyme/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Gene/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/KEGG/Compound/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/internal_coords.py to internal_coords.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Entity.py to Entity.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/mmtfio.py to mmtfio.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Selection.py to Selection.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/SCADIO.py to SCADIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmcifio.py to mmcifio.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/qcprot.py to qcprot.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PICIO.py to PICIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/NACCESS.py to NACCESS.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/ic_data.py to ic_data.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PSEA.py to PSEA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Model.py to Model.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Chain.py to Chain.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/DSSP.py to DSSP.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Atom.py to Atom.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Dice.py to Dice.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Residue.py to Residue.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/SASA.py to SASA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/HSExposure.py to HSExposure.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PDBList.py to PDBList.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Superimposer.py to Superimposer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/vectors.py to vectors.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/binary_cif.py to binary_cif.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PDBParser.py to PDBParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/cealign.py to cealign.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/ic_rebuild.py to ic_rebuild.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Structure.py to Structure.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PDBIO.py to PDBIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PDBMLParser.py to PDBMLParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Polypeptide.py to Polypeptide.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/alphafold_db.py to alphafold_db.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqFeature.py to SeqFeature.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/MarkovModel.py to MarkovModel.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt/GOA.py to GOA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniProt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/TogoWS/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/UniGene/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/phen_micro.py to phen_micro.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/pm_fitting.py to pm_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/phenotype/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bed.py to test_Align_bed.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigmaf.py to test_Align_bigmaf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prodoc.py to test_prodoc.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_internal_coords.py to test_PDB_internal_coords.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_QCPSuperimposer.py to test_PDB_QCPSuperimposer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SMCRA.py to test_PDB_SMCRA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt_GOA.py to test_UniProt_GOA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBIO.py to test_PDB_PDBIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_msf.py to test_Align_msf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBList.py to test_PDB_PDBList.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Emboss.py to test_Emboss.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_fasta.py to test_Align_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Restriction.py to test_Restriction.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CAPS.py to test_CAPS.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_exonerate.py to test_Align_exonerate.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SASA.py to test_PDB_SASA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Xdna.py to test_SeqIO_Xdna.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBParser.py to test_PDB_PDBParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Selection.py to test_PDB_Selection.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniGene.py to test_UniGene.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PQR.py to test_PQR.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigbed.py to test_Align_bigbed.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise_alignment_map.py to test_pairwise_alignment_map.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_codonalign.py to test_Align_codonalign.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SnapGene.py to test_SeqIO_SnapGene.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align_substitution_matrices.py to test_align_substitution_matrices.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Application.py to test_Application.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PSEA.py to test_PDB_PSEA.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_NibIO.py to test_SeqIO_NibIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt.py to test_UniProt.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gck.py to test_SeqIO_Gck.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gfa.py to test_SeqIO_Gfa.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phyml_tool.py to test_phyml_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_clustal.py to test_Align_clustal.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_TwoBitIO.py to test_SeqIO_TwoBitIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_Record.py to test_Blast_Record.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_MafIO_index.py to test_MafIO_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SeqXML.py to test_SeqIO_SeqXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Polypeptide.py to test_PDB_Polypeptide.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prosite.py to test_prosite.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_File.py to test_File.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NMR.py to test_NMR.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_translate.py to test_translate.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Compass.py to test_Compass.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs.py to test_motifs.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Consensus.py to test_Consensus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_igraph.py to test_Phylo_igraph.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Cluster.py to test_Cluster.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_alphafold_db.py to test_PDB_alphafold_db.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_Alignment.py to test_Align_Alignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ProtParam.py to test_ProtParam.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_geo.py to test_geo.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_maf.py to test_Align_maf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align.py to test_align.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_nexus.py to test_Align_nexus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_psl.py to test_Align_psl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/seq_tests_common.py to seq_tests_common.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_UniprotIO.py to test_SeqIO_UniprotIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_mysql_connector_online.py to test_BioSQL_mysql_connector_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Exposure.py to test_PDB_Exposure.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_mauve.py to test_Align_mauve.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_phylip.py to test_Align_phylip.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_PdbIO.py to test_SeqIO_PdbIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SffIO.py to test_SeqIO_SffIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_emboss.py to test_Align_emboss.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG.py to test_KEGG.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_kNN.py to test_kNN.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_hhr.py to test_Align_hhr.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_a2m.py to test_Align_a2m.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Muscle_tool.py to test_Muscle_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hhsuite2_text.py to test_SearchIO_hhsuite2_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/requires_internet.py to requires_internet.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_stockholm.py to test_Align_stockholm.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Dice.py to test_PDB_Dice.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_sam.py to test_Align_sam.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_seq.py to test_seq.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_DSSP.py to test_PDB_DSSP.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Disordered.py to test_PDB_Disordered.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_tabular.py to test_Align_tabular.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/pairwise2_testCases.py to pairwise2_testCases.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KeyWList.py to test_KeyWList.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2_no_C.py to test_pairwise2_no_C.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_RCSBFormats.py to test_RCSBFormats.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigpsl.py to test_Align_bigpsl.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_binary_cif.py to test_PDB_binary_cif.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Medline.py to test_Medline.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_codonalign.py to test_codonalign.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_NACCESS.py to test_PDB_NACCESS.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFIO.py to test_PDB_MMCIFIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_chain.py to test_Align_chain.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_parse_pdb_header.py to test_PDB_parse_pdb_header.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_parser.py to test_Blast_parser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Affy.py to test_Affy.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBMLParser.py to test_PDB_PDBMLParser.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_CEAligner.py to test_PDB_CEAligner.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_bgzf.py to test_bgzf.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phd.py to test_Phd.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Ace.py to test_Ace.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/BioSeq.py to BioSeq.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/DBUtils.py to DBUtils.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/Loader.py to Loader.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/fasta_dictionary.py to fasta_dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/ACT_example.py to ACT_example.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/clustal_run.py to clustal_run.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/fasta_iterator.py to fasta_iterator.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/www_blast.py to www_blast.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/Proux_et_al_2002_Figure_6.py to Proux_et_al_2002_Figure_6.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/swissprot.py to swissprot.cpython-313.pyc byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr/simplepredict.py to simplepredict.cpython-313.pyc running install_egg_info Copying biopython.egg-info to /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info Skipping SOURCES.txt running install_scripts dh_numpy3 -ppython3-biopython Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57. Can't stat debian/python3-biopython: No such file or directory at /usr/bin/dh_numpy3 line 85. dh_numpy3: warning: skipping binary package python3-biopython which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_install -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython//usr/lib/python3.13/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/Bio debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info debian/python3-biopython//usr/lib/python3.13/dist-packages/ install -m0755 -d debian/python3-biopython-sql//usr/lib/python3.13/dist-packages cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/BioSQL debian/python3-biopython-sql//usr/lib/python3.13/dist-packages/ rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_installdocs -i dh_installdocs: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc cd './Doc/_build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc cp --reflink=auto -a ./debian/README.test debian/python-biopython-doc/usr/share/doc/python-biopython-doc cp --reflink=auto -a ./debian/tests/run-unit-test debian/python-biopython-doc/usr/share/doc/python-biopython-doc cd './debian/Tests_fixme/..' && find 'Tests_fixme' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc chmod -R u\+rw,go=rX debian/python-biopython-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biopython-doc/usr/share/doc/python-biopython-doc/copyright install -m0755 -d debian/python-biopython-doc/usr/share/doc-base/ install -p -m0644 debian/python-biopython-doc.doc-base debian/python-biopython-doc/usr/share/doc-base/python-biopython-doc.biopython-tutorial install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql install -p -m0644 debian/copyright debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/copyright find debian -name __pycache__ -type d | xargs rm -rf # dh_installdocs seems to refuse copying zero length files (for # instance Tests/Blast/tab_2226_tblastn_002.txt) but these are # needed for the tests as well # The following line breaks the build with nocheck, but # we can't remove it yet because doing so seems to break autopkgtests cp -a debian/tmp_tests/* /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc # Tackle privacy breaches caused by MathML. sed -i 's@https://cdn.jsdelivr.net/npm/mathjax\@3/es5/tex-mml-chtml.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/Tutorial/*.html \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/index.html # Clean fonts that made their way to the documentation package. rm -rvf /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/ removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Regular.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Bold.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.ttf' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.ttf' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.ttf' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.eot' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.ttf' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff2' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.svg' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.ttf' removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.woff2' removed directory '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/' # Use Debian provided Javascript files. rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js' ln -sv /usr/share/javascript/jquery/jquery.js \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js' -> '/usr/share/javascript/jquery/jquery.js' rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js' ln -sv /usr/share/javascript/sphinxdoc/1.0/doctools.js \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js' -> '/usr/share/javascript/sphinxdoc/1.0/doctools.js' rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js' ln -sv /usr/share/javascript/sphinxdoc/1.0/language_data.js \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js' -> '/usr/share/javascript/sphinxdoc/1.0/language_data.js' rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js' ln -sv /usr/share/javascript/sphinxdoc/1.0/searchtools.js \ /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js' -> '/usr/share/javascript/sphinxdoc/1.0/searchtools.js' make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_installdocs -O--buildsystem=pybuild -Npython-biopython-doc -Npython3-biopython-sql install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython cp --reflink=auto -a ./CONTRIB.rst debian/python3-biopython/usr/share/doc/python3-biopython cp --reflink=auto -a ./CONTRIBUTING.rst debian/python3-biopython/usr/share/doc/python3-biopython cp --reflink=auto -a ./DEPRECATED.rst debian/python3-biopython/usr/share/doc/python3-biopython cp --reflink=auto -a ./NEWS.rst debian/python3-biopython/usr/share/doc/python3-biopython chmod -R u\+rw,go=rX debian/python3-biopython/usr/share/doc install -p -m0644 debian/README.Debian debian/python3-biopython/usr/share/doc/python3-biopython/README.Debian install -p -m0644 debian/TODO debian/python3-biopython/usr/share/doc/python3-biopython/TODO.Debian install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.dch.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.news.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/NEWS.Debian install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.dch.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.news.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/NEWS.Debian install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.dch.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/changelog.Debian install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.news.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/NEWS.Debian dh_installexamples -O--buildsystem=pybuild dh_installexamples: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ACT_example.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/alpha.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/beta.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/clustal_run.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ec_5.4.2.2.txt debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/fasta_dictionary.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/fasta_iterator.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ls_orchid.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bgz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bz2 debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.gz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/m_cold.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/my_blast.xml debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/my_blat.psl debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/nmr debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/opuntia.aln debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/opuntia.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/opuntia.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/PF05371_seed.sth debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/Plates.csv debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/Proux_et_al_2002_Figure_6.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/simple.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/swissprot.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples cp --reflink=auto -a ./Doc/examples/www_blast.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250308 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:166: skipping package python-biopython-doc (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=python-biopython, binary packages=['python3-biopython', 'python3-biopython-sql'] D: dh_python3 dh_python3:205: processing package python3-biopython... D: dh_python3 fs:50: moving files from debian/python3-biopython/usr/lib/python3.13/dist-packages to debian/python3-biopython/usr/lib/python3/dist-packages/ D: dh_python3 fs:338: package python3-biopython details = {'requires.txt': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/requires.txt'}, 'egg-info': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-biopython D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3:any', 'python3 (<< 3.14)', 'python3 (>= 3.13~)', 'python3-numpy'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:205: processing package python3-biopython-sql... D: dh_python3 fs:50: moving files from debian/python3-biopython-sql/usr/lib/python3.13/dist-packages to debian/python3-biopython-sql/usr/lib/python3/dist-packages/ D: dh_python3 fs:338: package python3-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-biopython-sql D: dh_python3 depends:253: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/usr/share/lintian/overrides install -p -m0644 debian/python3-biopython.lintian-overrides debian/python3-biopython/usr/share/lintian/overrides/python3-biopython install -m0755 -d debian/python-biopython-doc/usr/share/lintian/overrides install -p -m0644 debian/python-biopython-doc.lintian-overrides debian/python-biopython-doc/usr/share/lintian/overrides/python-biopython-doc dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs rm -f debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd ln -s ../../../../../../share/xml/w3c-sgml-lib/schema/dtd/XX-MathML2-20031104/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js ln -s ../../../../javascript/jquery/jquery.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1744399800 as canonical time Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigil_labels.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/three_track_simple.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigil_arrow_shafts.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/phylo-draw-example.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/phylo-simple-draw.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/dot_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/PSIBlastRecord.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/biopython_logo_m.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/plasmid_circular_nice.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/SRR001666.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/simple_chrom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/plasmid_linear_nice.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/1a8o-ca-plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/smcra.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigil_arrow_heads.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/BlastRecord.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/plasmid_circular.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/phylo-color-draw.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/gc_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/plasmid_linear.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/three_track_cl.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/tRNA_chrom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/phe-pairs-3pbl.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/hist_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/three_track_cl2a.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/PDB/3jqh.bcif.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples/ls_orchid.gbk.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/dot_plot_scatter.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigils.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/PDB/6wg6.bcif.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/PDB/1gbt.bcif.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Fasta/flowers.pro.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--buildsystem=pybuild cd debian/python3-biopython cd debian/python-biopython-doc cd debian/python3-biopython-sql chmod a-x usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian chmod a-x usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian gzip -9nf usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian gzip -9nf usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian cd '/build/reproducible-path/python-biopython-1.85+dfsg' chmod a-x usr/share/doc/python-biopython-doc/NEWS.Debian usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1 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usr/share/doc/python-biopython-doc/Tests/test_seq.py usr/share/doc/python-biopython-doc/Tests_avoid/test_EmbossPhylipNew.py usr/share/doc/python-biopython-doc/Tests_avoid/test_GraphicsBitmaps.py usr/share/doc/python-biopython-doc/Tests_avoid/test_MSAProbs_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PDB_ResidueDepth.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop_EasyController.py usr/share/doc/python-biopython-doc/Tests_avoid/test_XXmotif_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_mmtf.py usr/share/doc/python-biopython-doc/changelog.Debian cd '/build/reproducible-path/python-biopython-1.85+dfsg' rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_fixperms find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-biopython/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biopython-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biopython-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian -name "*.dtd" -exec chmod -x \{\} \; chmod: cannot operate on dangling symlink 'debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd' make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg' dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug -- debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so objcopy --compress-debug-sections debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug chmod 0644 -- debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu/python3-biopython.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e8 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e8/6dde1bd784a5e725f023537b20494136c87819.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e8/6dde1bd784a5e725f023537b20494136c87819.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e8/6dde1bd784a5e725f023537b20494136c87819.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/cc objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/cc/78adcb6ea680d75608f99eeaf2f7cc130d137d.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/cc/78adcb6ea680d75608f99eeaf2f7cc130d137d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/cc/78adcb6ea680d75608f99eeaf2f7cc130d137d.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d6 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d6/5197f47f017875837b36020142da713d09d07a.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d6/5197f47f017875837b36020142da713d09d07a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/d6/5197f47f017875837b36020142da713d09d07a.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/dd/99fe6fa54919c80484a922578434ee51872898.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/dd/99fe6fa54919c80484a922578434ee51872898.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/dd/99fe6fa54919c80484a922578434ee51872898.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0c objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0c/46abc269d93162f90a3d01bc20acde608ce491.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0c/46abc269d93162f90a3d01bc20acde608ce491.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0c/46abc269d93162f90a3d01bc20acde608ce491.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8a/17afee42a289eba6aafdb65a2858e57f8dbfaa.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8a/17afee42a289eba6aafdb65a2858e57f8dbfaa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8a/17afee42a289eba6aafdb65a2858e57f8dbfaa.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3e/ced5fbc48928ca8ec19a05660aa40027df5680.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3e/ced5fbc48928ca8ec19a05660aa40027df5680.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3e/ced5fbc48928ca8ec19a05660aa40027df5680.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/c5338c858d5725a31377cd19c43f171c5ea2a6.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/c5338c858d5725a31377cd19c43f171c5ea2a6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bb/c5338c858d5725a31377cd19c43f171c5ea2a6.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3d objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3d/2e225242529bf1c070877c799dff46996d53fe.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3d/2e225242529bf1c070877c799dff46996d53fe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/3d/2e225242529bf1c070877c799dff46996d53fe.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/c0/101cee270212b72d9370ff34b249858531be74.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/c0/101cee270212b72d9370ff34b249858531be74.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/c0/101cee270212b72d9370ff34b249858531be74.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bc/4a3aa1586c51c3a7617b4a6aab83878e374bff.debug chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bc/4a3aa1586c51c3a7617b4a6aab83878e374bff.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bc/4a3aa1586c51c3a7617b4a6aab83878e374bff.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biopython/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-biopython/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biopython/usr/lib/debug install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc ln -s python3-biopython debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc/python3-biopython-dbgsym install -m0755 -d debian/.debhelper/python3-biopython dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python3-biopython/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/DEBIAN dpkg-shlibdeps -Tdebian/python3-biopython.substvars debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-i386-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-i386-linux-gnu.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/postinst cat debian/python3-biopython.postinst.debhelper >> debian/python3-biopython/DEBIAN/postinst chmod 0755 -- debian/python3-biopython/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/prerm cat debian/python3-biopython.prerm.debhelper >> debian/python3-biopython/DEBIAN/prerm chmod 0755 -- debian/python3-biopython/DEBIAN/prerm install -m0755 -d debian/python-biopython-doc/DEBIAN install -m0755 -d debian/python3-biopython-sql/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/postinst cat debian/python3-biopython-sql.postinst.debhelper >> debian/python3-biopython-sql/DEBIAN/postinst chmod 0755 -- debian/python3-biopython-sql/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/prerm cat debian/python3-biopython-sql.prerm.debhelper >> debian/python3-biopython-sql/DEBIAN/prerm chmod 0755 -- debian/python3-biopython-sql/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python-biopython-doc/DEBIAN echo misc:Depends= >> debian/python-biopython-doc.substvars echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -cdebian/control -Pdebian/python-biopython-doc install -m0755 -d debian/python3-biopython/DEBIAN echo misc:Depends= >> debian/python3-biopython.substvars echo misc:Pre-Depends= >> debian/python3-biopython.substvars install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/.debhelper/python3-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-biopython-dbgsym "-DDepends=python3-biopython (= \${binary:Version})" "-DDescription=debug symbols for python3-biopython" "-DBuild-Ids=0c46abc269d93162f90a3d01bc20acde608ce491 3d2e225242529bf1c070877c799dff46996d53fe 3eced5fbc48928ca8ec19a05660aa40027df5680 8a17afee42a289eba6aafdb65a2858e57f8dbfaa bbc5338c858d5725a31377cd19c43f171c5ea2a6 bc4a3aa1586c51c3a7617b4a6aab83878e374bff c0101cee270212b72d9370ff34b249858531be74 cc78adcb6ea680d75608f99eeaf2f7cc130d137d d65197f47f017875837b36020142da713d09d07a dd99fe6fa54919c80484a922578434ee51872898 e86dde1bd784a5e725f023537b20494136c87819" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/python3-biopython-sql/DEBIAN echo misc:Depends= >> debian/python3-biopython-sql.substvars echo misc:Pre-Depends= >> debian/python3-biopython-sql.substvars dpkg-gencontrol -ppython3-biopython-sql -ldebian/changelog -Tdebian/python3-biopython-sql.substvars -cdebian/control -Pdebian/python3-biopython-sql dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python3:Provides} used, but is not defined chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/python3-biopython chmod 0644 -- debian/python-biopython-doc/DEBIAN/control chmod 0644 -- debian/python3-biopython/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython/DEBIAN install -m0755 -d debian/python-biopython-doc/DEBIAN install -m0755 -d debian/python3-biopython-sql/DEBIAN cd debian/python3-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-biopython-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN cd debian/.debhelper/python3-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python-biopython-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-biopython .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-biopython/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python-biopython-doc .. dpkg-deb --root-owner-group --build debian/python3-biopython-sql .. dpkg-deb: building package 'python3-biopython-dbgsym' in '../python3-biopython-dbgsym_1.85+dfsg-4_i386.deb'. dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.85+dfsg-4_all.deb'. dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.85+dfsg-4_all.deb'. dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.85+dfsg-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../python-biopython_1.85+dfsg-4_i386.buildinfo dpkg-genchanges --build=binary -O../python-biopython_1.85+dfsg-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/110584 and its subdirectories I: Current time: Sun Apr 13 02:49:00 -12 2025 I: pbuilder-time-stamp: 1744555740 Sun Apr 13 14:49:02 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Sun Apr 13 14:49:02 UTC 2025 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Sun Apr 13 15:00:14 UTC 2025 I: Deleting $TMPDIR on ionos6-i386.debian.net. Sun Apr 13 15:00:15 UTC 2025 I: python-biopython_1.85+dfsg-4_i386.changes: Format: 1.8 Date: Fri, 11 Apr 2025 21:30:00 +0200 Source: python-biopython Binary: python-biopython-doc python3-biopython python3-biopython-dbgsym python3-biopython-sql Architecture: all i386 Version: 1.85+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Santiago Vila Description: python-biopython-doc - Documentation for the Biopython library python3-biopython - Python3 library for bioinformatics python3-biopython-sql - Biopython support for the BioSQL database schema (Python 3) Changes: python-biopython (1.85+dfsg-4) unstable; urgency=medium . * Team upload. * Restore deleted line as it seems to break autopkgtests. Checksums-Sha1: 514fa98b19e5b7b31e7fd5779e90326a66dca447 18236424 python-biopython-doc_1.85+dfsg-4_all.deb 9eea7a93f7548c872ade19d962a5983109be8e51 14493 python-biopython_1.85+dfsg-4_i386.buildinfo 04d32e656e0c1b5ade03b7831cf1591e4b7e1837 351228 python3-biopython-dbgsym_1.85+dfsg-4_i386.deb 33916b5e48987a8c1d9a6cd03e0bc5e8f33610f5 33384 python3-biopython-sql_1.85+dfsg-4_all.deb d0da4f1a320e84b54265ca11701cf438a147da20 1667864 python3-biopython_1.85+dfsg-4_i386.deb Checksums-Sha256: 426817bcda7be88ee55cd81bc5998331b5dab734e1b3aa78b7849289a287405a 18236424 python-biopython-doc_1.85+dfsg-4_all.deb 855c617e845ba165e2497ea5859c2fbfc9a2847f010d0c8d68ba3880a1fd5117 14493 python-biopython_1.85+dfsg-4_i386.buildinfo 7217e0a5189746fa3b61e75408ed7be850e57e0a5a303be60cd9d12969eadfc1 351228 python3-biopython-dbgsym_1.85+dfsg-4_i386.deb 429dae7e1f0a295a22e280a4e761cca46d7a7f4062cb78b4dc40ce11c4737ac1 33384 python3-biopython-sql_1.85+dfsg-4_all.deb aba21c74df7ed3f69808e3be76ac725632b75785ef3186ae569380ca3ed7be1b 1667864 python3-biopython_1.85+dfsg-4_i386.deb Files: bce6b61084d19b5a4189b2275fec09aa 18236424 doc optional python-biopython-doc_1.85+dfsg-4_all.deb 419fa390f5f3f9cea4101b7229273b15 14493 python optional python-biopython_1.85+dfsg-4_i386.buildinfo 4170c48210f1f5c604795c80f12d2c3d 351228 debug optional python3-biopython-dbgsym_1.85+dfsg-4_i386.deb 667203a9c92106101d900db402914a57 33384 python optional python3-biopython-sql_1.85+dfsg-4_all.deb 41eb145fb4cba7e5c9524075ea98f9d3 1667864 python optional python3-biopython_1.85+dfsg-4_i386.deb Sun Apr 13 15:00:16 UTC 2025 I: diffoscope 293 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_1-61779.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/python-biopython_1.85+dfsg-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/python-biopython_1.85+dfsg-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/python-biopython_1.85+dfsg-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/b1/python-biopython_1.85+dfsg-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.EKdyxK8Q/b2/python-biopython_1.85+dfsg-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 241ms CPU time consumed: 241ms Sun Apr 13 15:00:18 UTC 2025 I: diffoscope 293 found no differences in the changes files, and a .buildinfo file also exists. Sun Apr 13 15:00:18 UTC 2025 I: python-biopython from unstable built successfully and reproducibly on i386. Sun Apr 13 15:00:19 UTC 2025 I: Submitting .buildinfo files to external archives: Sun Apr 13 15:00:19 UTC 2025 I: Submitting 16K b1/python-biopython_1.85+dfsg-4_i386.buildinfo.asc Sun Apr 13 15:00:25 UTC 2025 I: Submitting 16K b2/python-biopython_1.85+dfsg-4_i386.buildinfo.asc Sun Apr 13 15:00:29 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Apr 13 15:00:29 UTC 2025 I: Done submitting .buildinfo files. Sun Apr 13 15:00:29 UTC 2025 I: Removing signed python-biopython_1.85+dfsg-4_i386.buildinfo.asc files: removed './b1/python-biopython_1.85+dfsg-4_i386.buildinfo.asc' removed './b2/python-biopython_1.85+dfsg-4_i386.buildinfo.asc'