Fri Mar 7 16:25:30 UTC 2025 I: starting to build q2-dada2/unstable/i386 on jenkins on '2025-03-07 16:25'
Fri Mar 7 16:25:30 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_4/55197/console.log
Fri Mar 7 16:25:30 UTC 2025 I: Downloading source for unstable/q2-dada2=2024.5.0-1
--2025-03-07 16:25:30-- http://deb.debian.org/debian/pool/main/q/q2-dada2/q2-dada2_2024.5.0-1.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2086 (2.0K) [text/prs.lines.tag]
Saving to: ‘q2-dada2_2024.5.0-1.dsc’
0K .. 100% 284M=0s
2025-03-07 16:25:30 (284 MB/s) - ‘q2-dada2_2024.5.0-1.dsc’ saved [2086/2086]
Fri Mar 7 16:25:30 UTC 2025 I: q2-dada2_2024.5.0-1.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: q2-dada2
Binary: q2-dada2
Architecture: any
Version: 2024.5.0-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Homepage: https://qiime2.org/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/q2-dada2
Vcs-Git: https://salsa.debian.org/med-team/q2-dada2.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all, python3-pytest-cov
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, qiime (>= 2024.5), r-bioc-dada2
Package-List:
q2-dada2 deb science optional arch=any
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Fri Mar 7 16:25:30 UTC 2025 I: Checking whether the package is not for us
Fri Mar 7 16:25:30 UTC 2025 I: Starting 1st build on remote node ionos16-i386.debian.net.
Fri Mar 7 16:25:30 UTC 2025 I: Preparing to do remote build '1' on ionos16-i386.debian.net.
Fri Mar 7 16:25:48 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Thu Apr 9 10:48:29 -12 2026
I: pbuilder-time-stamp: 1775774909
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [q2-dada2_2024.5.0-1.dsc]
I: copying [./q2-dada2_2024.5.0.orig.tar.gz]
I: copying [./q2-dada2_2024.5.0-1.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./q2-dada2_2024.5.0-1.dsc: unsupported subcommand
dpkg-source: info: extracting q2-dada2 in q2-dada2-2024.5.0
dpkg-source: info: unpacking q2-dada2_2024.5.0.orig.tar.gz
dpkg-source: info: unpacking q2-dada2_2024.5.0-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying configparser.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/90526/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
INVOCATION_ID='0df4960a9df244fc96792755ab2d690f'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='90526'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H6npdFXG/pbuilderrc_xT6j --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H6npdFXG/b1 --logfile b1/build.log q2-dada2_2024.5.0-1.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://213.165.73.152:3128'
I: uname -a
Linux ionos16-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/90526/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, qiime (>= 2024.5), r-bioc-dada2
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19769 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-all; however:
Package python3-all is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on qiime (>= 2024.5); however:
Package qiime is not installed.
pbuilder-satisfydepends-dummy depends on r-bioc-dada2; however:
Package r-bioc-dada2 is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libarchive-zip-perl{a} libblas3{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgcrypt20{a} libgfortran5{a} libgpg-error0{a} libgssapi-krb5-2{a} libicu72{a} libjs-bootstrap4{a} libjs-jquery{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libmagic-mgc{a} libmagic1t64{a} libnorm1t64{a} libpgm-5.3-0t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libsodium23{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} libxslt1.1{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} openssl{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-cryptography{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-globus-sdk{a} python3-greenlet{a} python3-idna{a} python3-inflect{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-lxml{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-psutil{a} python3-public{a} python3-pyparsing{a} python3-pytz{a} python3-requests{a} python3-setproctitle{a} python3-setuptools{a} python3-sqlalchemy{a} python3-tblib{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.13{a} python3.13-minimal{a} qiime{a} readline-common{a} sensible-utils{a} tzdata{a}
The following packages are RECOMMENDED but will NOT be installed:
curl krb5-locales libarchive-cpio-perl libgpg-error-l10n libltdl-dev libmail-sendmail-perl lynx node-jquery python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-openssl python3-pydot python3-pygraphviz python3-pyinotify python3-scipy python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-feature-table q2-quality-filter q2-types q2cli q2templates r-cran-plotly wget
0 packages upgraded, 128 newly installed, 0 to remove and 0 not upgraded.
Need to get 71.3 MB of archives. After unpacking 348 MB will be used.
The following packages have unmet dependencies:
pbuilder-satisfydepends-dummy : Depends: r-bioc-dada2 which is a virtual package and is not provided by any available package
Unable to resolve dependencies! Giving up...
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libarchive-zip-perl{a} libblas3{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgcrypt20{a} libgfortran5{a} libgpg-error0{a} libgssapi-krb5-2{a} libicu72{a} libjs-bootstrap4{a} libjs-jquery{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libmagic-mgc{a} libmagic1t64{a} libnorm1t64{a} libpgm-5.3-0t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libsodium23{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} libxslt1.1{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} openssl{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-cryptography{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-globus-sdk{a} python3-greenlet{a} python3-idna{a} python3-inflect{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-lxml{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-psutil{a} python3-public{a} python3-pyparsing{a} python3-pytz{a} python3-requests{a} python3-setproctitle{a} python3-setuptools{a} python3-sqlalchemy{a} python3-tblib{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.13{a} python3.13-minimal{a} qiime{a} readline-common{a} sensible-utils{a} tzdata{a}
The following packages are RECOMMENDED but will NOT be installed:
curl krb5-locales libarchive-cpio-perl libgpg-error-l10n libltdl-dev libmail-sendmail-perl lynx node-jquery python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-openssl python3-pydot python3-pygraphviz python3-pyinotify python3-scipy python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-feature-table q2-quality-filter q2-types q2cli q2templates r-cran-plotly wget
0 packages upgraded, 128 newly installed, 0 to remove and 0 not upgraded.
Need to get 71.3 MB of archives. After unpacking 348 MB will be used.
Abort.
E: pbuilder-satisfydepends failed.
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/90526 and its subdirectories
Fri Mar 7 16:25:49 UTC 2025 W: No second build log, what happened?
Fri Mar 7 16:25:49 UTC 2025 W: Downloading the build dependencies failed
Fri Mar 7 16:25:49 UTC 2025 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case.
Fri Mar 7 16:25:49 UTC 2025 W: Network problems are automatically rescheduled after some hours.